Citrus Sinensis ID: 013678

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------44
Protein Sequence
METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATGET
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccEEEEccccccccccEEEEEEcccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHcccccccEEEEcccEEccccEEEEEccccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEccccccccccccccccccccccccccccccccEEEEcccccccccccEEEEccccccccEEEEccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHHccccccccccccccccccccccHHHHHHHcccccHHHHHccccccHHHHHHHHHHHHcccccccccHHHHHccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEcccccccccccccccccccccccccccccccccEEcccEcccccccccccccHcccccccccccccccccccccEEEEEEEEccccEEEEEEEEEcccEEEEEEEEccccEEEEEEEEcccHHHHHHHHHHHHHHHHHccccEEEEEEccccccHcccccEEEEEEccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcccccEEEcccccEEEcccccccccccccccEEEEEEccccccccccccEcccccccccHHHHcccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHcHHHHHHHHHccccccccccccHHHHHHccccccccccHHHHcccccHHHHHHHHHHccccccccccHHHHHccHHHcccccccccccccccc
Coil and Loop (DISEMBL)
metqriiefphknmdkrprkrprltwdvppplpppkvlpalycvqefgnggmpnyacssmfygaiprtgsppwrpddkdghyVFAIGENLTPRCKILskmgegtfgqVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLArhdiggtrcvqirnwfDYRNHICIVFEKLGPSLYDFLrknsyrsfPIDLVRELGRQLLESVAFMHELRLIhtdlkpenILLVSAeyvkvpdykflsrsskdgsyfknlpkssaiklidfgsttfehqdhsyvvstrhyrapevilglgwnypcdlwsvGCILVELCSGEALFQTHENLEHLAMMERVlgplphhmvIRADRRAEKYFRrgarldwpdgatsrdSMRAVWKLLrlpnlimqhVDHSAGDLIDLLQGLLRYDPAERLKAREalrhpfftrdvrrptllvatget
Flexible Loop (DISEMBL)
metqriiefphknmdkrprkrprltwdvppplpppkVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQrlarhdiggtrcvqirnWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIhtdlkpenILLVSAEYVKVPDYKFlsrsskdgsyfknlpkssAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRgarldwpdgatsrdSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKArealrhpfftrdvrrptllvatget
Low Complexity Region (SEG)
METQRIIEFPHKNMDKRPRKRPRLTWDvppplpppkvlpALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATGET
Disordered region (IsUnstruct)
***********************************KVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS**DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL******
Disordered Region (DISOPRED)
****************************************************************************DKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF*************LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGAR*****************************VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF****************
Disordered Region (DISEMBL)
METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATGET
Disordered Region (DISPRO)
***********KNMD**PRKRPRLTWDVPPPLPPPKVLPALYCVQEFGN***************************DKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD*************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATGET
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	438	2.2.26 [Sep-21-2011]
P51566	467	Serine/threonine-protein	yes	no	0.968	0.907	0.834	0.0
P51567	427	Serine/threonine-protein	no	no	0.956	0.981	0.713	0.0
P51568	400	Serine/threonine-protein	no	no	0.888	0.972	0.640	1e-151
Q10156	690	Dual specificity protein	yes	no	0.776	0.492	0.466	7e-93
O35491	499	Dual specificity protein	yes	no	0.762	0.669	0.477	3e-88
P49760	499	Dual specificity protein	yes	no	0.764	0.671	0.475	4e-88
P49762	832	Serine/threonine-protein	no	no	0.769	0.405	0.473	3e-87
O35493	481	Dual specificity protein	no	no	0.760	0.692	0.472	2e-85
Q9HAZ1	481	Dual specificity protein	no	no	0.760	0.692	0.467	2e-85
P49759	484	Dual specificity protein	no	no	0.760	0.688	0.467	5e-83

>sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/429 (83%), Positives = 393/429 (91%), Gaps = 5/429 (1%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVL-----PALYCVQEFGNGGMPNY 55
           +ETQR +EFPH+ +DKRPRKRPRLTWD  PPL PP        P LY   EF +G +PN+
Sbjct: 17  LETQRNVEFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNF 76

Query: 56  ACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNE 115
              +MFY  +PR GSPPWRPDDKDGHYVF +G+ LTPR +ILSKMGEGTFGQV+ECFDN+
Sbjct: 77  VYPNMFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFDNK 136

Query: 116 KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175
            KE+VAIK++RSINKYREAAMIEIDVLQRL RHD+GG+RCVQIRNWFDYRNHICIVFEKL
Sbjct: 137 NKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKL 196

Query: 176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 235
           GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA+MH+LRLIHTDLKPENILLVS+EY+K+
Sbjct: 197 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKI 256

Query: 236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW 295
           PDYKFLSR +KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH+Y+VSTRHYRAPEVILG+GW
Sbjct: 257 PDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYRAPEVILGVGW 316

Query: 296 NYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 355
           NYPCDLWS+GCILVELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRR+EKYFRR
Sbjct: 317 NYPCDLWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVLRADRRSEKYFRR 376

Query: 356 GARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE 415
           GA+LDWP+GATSRDS++AVWKL RLPNLIMQHVDHSAGDLIDLLQGLLRYDP ER KARE
Sbjct: 377 GAKLDWPEGATSRDSLKAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPTERFKARE 436

Query: 416 ALRHPFFTR 424
           AL HPFFTR
Sbjct: 437 ALNHPFFTR 445

Activator of yeast transcription factor, STE12.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 2EC: .EC: 1

>sp|P51567|AFC2_ARATH Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/430 (71%), Positives = 361/430 (83%), Gaps = 11/430 (2%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGN------GGMPN 54
           ME +R+ EFPH +MD+RPRKR RL WDV P     +V   ++C QE GN       G P+
Sbjct: 1   MEMERVHEFPHTHMDRRPRKRARLGWDVLPQATKAQV--GMFCGQEIGNISSFASSGAPS 58

Query: 55  YACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDN 114
              SS+    + R GSPPWR DDKDGHY+F +G++LTPR KI SKMGEGTFGQV+EC+D 
Sbjct: 59  DNSSSLCVKGVARNGSPPWREDDKDGHYIFELGDDLTPRYKIYSKMGEGTFGQVLECWDR 118

Query: 115 EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK 174
           E+KE+VA+KIVR + KYREAAMIEI++LQ+L +HD GG RCVQIRNWFDYRNHICIVFEK
Sbjct: 119 ERKEMVAVKIVRGVKKYREAAMIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEK 178

Query: 175 LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 234
           LG SLYDFLRKN+YRSFPIDLVRE+G QLLE VAFMH+LR+IHTDLKPENILLVS++YVK
Sbjct: 179 LGSSLYDFLRKNNYRSFPIDLVREIGWQLLECVAFMHDLRMIHTDLKPENILLVSSDYVK 238

Query: 235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG 294
           +P+YK  SR  +D  Y K +PKSSAIK+IDFGSTT+E QD +Y+VSTRHYRAPEVILGLG
Sbjct: 239 IPEYKG-SRLQRDVCY-KRVPKSSAIKVIDFGSTTYERQDQTYIVSTRHYRAPEVILGLG 296

Query: 295 WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFR 354
           W+YPCD+WSVGCI+VELC+GEALFQTHENLEHLAMMERVLGP P  M+ + DR +EKY R
Sbjct: 297 WSYPCDVWSVGCIIVELCTGEALFQTHENLEHLAMMERVLGPFPQQMLKKVDRHSEKYVR 356

Query: 355 RGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR 414
           RG RLDWPDGATSRDS++AV KL RL NLIMQHVDHSAG+LI+++QGLLR+DP+ER+ AR
Sbjct: 357 RG-RLDWPDGATSRDSLKAVLKLPRLQNLIMQHVDHSAGELINMVQGLLRFDPSERITAR 415

Query: 415 EALRHPFFTR 424
           EALRHPFF R
Sbjct: 416 EALRHPFFAR 425

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P51568|AFC3_ARATH Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2

 Score =  535 bits (1379), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 264/412 (64%), Positives = 322/412 (78%), Gaps = 23/412 (5%)

Query: 12  KNMDK-RPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGS 70
           ++MDK R RKRPR+TWD  P  P  K       ++  G+ G               R  S
Sbjct: 7   ESMDKERVRKRPRMTWDEAPAEPEAKRA----VIKGHGSDG---------------RILS 47

Query: 71  PPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK 130
           PP R DD+DGHYVF++ +NLTPR KILSKMGEGTFG+V+EC+D + KE VAIKI+RSI K
Sbjct: 48  PPLRDDDRDGHYVFSLRDNLTPRYKILSKMGEGTFGRVLECWDRDTKEYVAIKIIRSIKK 107

Query: 131 YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRS 190
           YR+AAMIEIDVLQ+L + D G TRCVQ++NWFDYRNHICIVFEKLGPSL+DFL++N Y +
Sbjct: 108 YRDAAMIEIDVLQKLVKSDKGRTRCVQMKNWFDYRNHICIVFEKLGPSLFDFLKRNKYSA 167

Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250
           FP+ LVR+ G QLLESVA+MHEL+L+HTDLKPENILLVS+E VK+PD K   RS+ + ++
Sbjct: 168 FPLALVRDFGCQLLESVAYMHELQLVHTDLKPENILLVSSENVKLPDNK---RSAANETH 224

Query: 251 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 310
           F+ LPKSSAIKLIDFGST  +++ H  +V TRHYR+PEVILGLGW+Y CDLWS+GCIL E
Sbjct: 225 FRCLPKSSAIKLIDFGSTVCDNRIHHSIVQTRHYRSPEVILGLGWSYQCDLWSIGCILFE 284

Query: 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 370
           LC+GEALFQTH+NLEHLAMMER LGPLP HM  +A R AEKYFRRG RL+WP+GA SR+S
Sbjct: 285 LCTGEALFQTHDNLEHLAMMERALGPLPEHMTRKASRGAEKYFRRGCRLNWPEGANSRES 344

Query: 371 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           +RAV +L RL +++ +HVD++     DLL GLL YDP+ERL A EAL HPFF
Sbjct: 345 IRAVKRLDRLKDMVSKHVDNTRSRFADLLYGLLAYDPSERLTANEALDHPFF 396

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q10156|LKH1_SCHPO Dual specificity protein kinase lkh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lkh1 PE=1 SV=3

 Score =  341 bits (874), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 165/354 (46%), Positives = 236/354 (66%), Gaps = 14/354 (3%)

Query: 76  DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD DGHY          R  ++  +G GTFG+V++C+D       AIK+ R+I KYREA+
Sbjct: 344 DDDDGHYKVVPNSKFANRYTVVRLLGHGTFGKVIQCYDQSTGRHCAIKVTRAIPKYREAS 403

Query: 136 MIEIDVLQRLARHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
           +IE+ VLQ +A  D     +C+Q+R++FDYR HICIV +  G S++DFL+ N+Y  FP+ 
Sbjct: 404 LIELRVLQTIAHSDPTNENKCIQLRDYFDYRKHICIVTDLFGWSVFDFLKNNNYIPFPLK 463

Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVS--AEYVKVPDYKFLSRSSKDGSYFK 252
            ++ L +QL +SVAF+H L L+HTDLKPEN+LLVS  +  +++P Y+         +Y +
Sbjct: 464 HIQMLSQQLFKSVAFLHSLGLVHTDLKPENVLLVSNASRTIRLP-YR---------NYSQ 513

Query: 253 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 312
            +  S  I+LIDFGS TFE + HS VVSTRHYRAPE+ILGLGW+YPCD+WS+GCILVEL 
Sbjct: 514 KVLNSCEIRLIDFGSATFEDEYHSSVVSTRHYRAPEIILGLGWSYPCDVWSIGCILVELF 573

Query: 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
           +G+ALFQTHE+ EHL MME++LGP   +M+ R+ R ++++F+   ++ +P   T + S+ 
Sbjct: 574 TGQALFQTHEDSEHLCMMEKILGPFDRNMISRSSRTSQRFFKSDGKVRYPLSNTPKKSIN 633

Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 426
            +  L  L   I          L+DLL+ +  YDP  R+ A+EAL HPFFT+ +
Sbjct: 634 YLQSLQTL-EQIFAVSSPEVALLLDLLKKVFVYDPKRRITAKEALWHPFFTQPI 686

Protein kinase that may act as a negative regulator of filamentous growth and flocculation. Appears to have a role in normal cell wall and septum formation and in cell seperation. May have antagonistic function in the regulation of beta-glucan distribution between the sites for cell wall and septum assembly.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|O35491|CLK2_MOUSE Dual specificity protein kinase CLK2 OS=Mus musculus GN=Clk2 PE=1 SV=2

 Score =  326 bits (835), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 167/350 (47%), Positives = 238/350 (68%), Gaps = 16/350 (4%)

Query: 76  DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREA 134
           DD +GH ++ +G+ L  R +I+S +GEGTFG+VV+C D+ +    VA+KI++++ KY+EA
Sbjct: 144 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGTQVALKIIKNVEKYKEA 203

Query: 135 AMIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A +EI+VL+++   D      CVQ+ +WFDY  H+CI FE LG S +DFL+ N+Y  +PI
Sbjct: 204 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 263

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
             VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y    +   L +   + S    
Sbjct: 264 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYN---LEKKRDERS---- 316

Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
             KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   
Sbjct: 317 -VKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 375

Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
           G  LFQTH+N EHLAMMER+LGP+P  M+ +   R +KYF RG RLDW +  ++   +R 
Sbjct: 376 GFTLFQTHDNREHLAMMERILGPVPSRMIRKT--RKQKYFYRG-RLDWDENTSAGRYVRE 432

Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
             K LR   L  +  DH    L DL++ +L Y+PA+RL   EAL+HPFF 
Sbjct: 433 NCKPLR-RYLTSEAEDHHQ--LFDLIENMLEYEPAKRLTLGEALQHPFFA 479

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49760|CLK2_HUMAN Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1

 Score =  325 bits (833), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 167/351 (47%), Positives = 239/351 (68%), Gaps = 16/351 (4%)

Query: 76  DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREA 134
           DD +GH ++ +G+ L  R +I+S +GEGTFG+VV+C D+ +    VA+KI++++ KY+EA
Sbjct: 145 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 204

Query: 135 AMIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A +EI+VL+++   D      CVQ+ +WFDY  H+CI FE LG S +DFL+ N+Y  +PI
Sbjct: 205 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 264

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
             VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y    +   L +   + S    
Sbjct: 265 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYN---LEKKRDERS---- 317

Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
             KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   
Sbjct: 318 -VKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 376

Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
           G  LFQTH+N EHLAMMER+LGP+P  M+ +   R +KYF RG RLDW +  ++   +R 
Sbjct: 377 GFTLFQTHDNREHLAMMERILGPIPSRMIRKT--RKQKYFYRG-RLDWDENTSAGRYVRE 433

Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             K LR   L  +  +H    L DL++ +L Y+PA+RL   EAL+HPFF R
Sbjct: 434 NCKPLR-RYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49762|DOA_DROME Serine/threonine-protein kinase Doa OS=Drosophila melanogaster GN=Doa PE=1 SV=2

 Score =  322 bits (826), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 167/353 (47%), Positives = 236/353 (66%), Gaps = 16/353 (4%)

Query: 76  DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD DGH ++  G+ L  R KI++ +GEGTFG+VV+  D E+   +A+KI++++ KYREAA
Sbjct: 461 DDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMERDYCMALKIIKNVEKYREAA 520

Query: 136 MIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
            +EI+ L+++A+ D      CV++ +WFDY  H+CIVFE LG S++DFLR+N+Y  +P+D
Sbjct: 521 KLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENNYEPYPLD 580

Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
            VR +  QL  SV F+H+ RL HTDLKPENIL V ++Y    ++K ++R  +        
Sbjct: 581 QVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHK-INREVRRV------ 633

Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
            K++ ++LIDFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL EL  G
Sbjct: 634 -KNTDVRLIDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYLG 692

Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMV---IRADRRAEKYFRRGARLDWPDGATSRDSM 371
             LFQTH+N EHLAMMER+LG +P+ M        +   KYF  G +LDW + +++   +
Sbjct: 693 ITLFQTHDNREHLAMMERILGQIPYRMARNHTLYSKTKTKYFYHG-KLDWDEKSSAGRYV 751

Query: 372 RAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
           R   K L L  L     DH   +L  L++ +L Y+P+ R+   EAL HPFF R
Sbjct: 752 RDHCKPLFLCQL-SDSEDHC--ELFSLIKKMLEYEPSSRITLGEALHHPFFDR 801

Negative regulator of the copia retrotransposon element of the white (w) gene. In the eye, it is required for normal pigmentation, photoreceptor cell development and for organization of interommatidial bristles. Also essential for embryonic segmentation and differentiation of the nervous system. Functions in the control of alternative splicing by phosphorylating the argine/serine-rich splicing factors, SR proteins.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|O35493|CLK4_MOUSE Dual specificity protein kinase CLK4 OS=Mus musculus GN=Clk4 PE=1 SV=1

 Score =  316 bits (810), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 165/349 (47%), Positives = 233/349 (66%), Gaps = 16/349 (4%)

Query: 76  DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREA 134
           DD++GH +   G+ L  R +I+  +GEG FG+VVEC D+    L VA+KIV+++ +YREA
Sbjct: 141 DDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGLHVAVKIVKNVGRYREA 200

Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A  EI VL+ L   D     RCVQ+  WFD+  H+CIVFE LG S YDF+++NS+  F I
Sbjct: 201 ARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQI 260

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
           D +R++  Q+ +S+ F+H  +L HTDLKPENIL V ++YV     K+ S+  +D    KN
Sbjct: 261 DHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYV----VKYNSKMKRDERTLKN 316

Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
               + IK++DFGS T++ + HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   
Sbjct: 317 ----TDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 372

Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
           G  +FQTH++ EHLAMMER+LGP+P HM+ +  +R  KYF    +LDW + +++   +R 
Sbjct: 373 GFTVFQTHDSKEHLAMMERILGPIPAHMIQKTRKR--KYFHHN-QLDWDEHSSAGRYVRR 429

Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             K L+    ++ H D     L DL++ +L YDPA R+   EAL+HPFF
Sbjct: 430 RCKPLK--EFMLCH-DEEHEKLFDLVRRMLEYDPARRITLDEALQHPFF 475

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates SRSF1 and SRSF3. Required for the regulation of alternative splicing of MAPT/TAU. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q9HAZ1|CLK4_HUMAN Dual specificity protein kinase CLK4 OS=Homo sapiens GN=CLK4 PE=1 SV=1

 Score =  316 bits (810), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 163/349 (46%), Positives = 233/349 (66%), Gaps = 16/349 (4%)

Query: 76  DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREA 134
           DD++GH +   G+ L  R +I+  +GEG FG+VVEC D+    + VA+KIV+++ +YREA
Sbjct: 141 DDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGMHVAVKIVKNVGRYREA 200

Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A  EI VL+ L   D     RCVQ+  WFD+  H+CIVFE LG S YDF+++NS+  F I
Sbjct: 201 ARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQI 260

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
           D +R++  Q+ +S+ F+H  +L HTDLKPENIL V ++YV     K+ S+  +D    KN
Sbjct: 261 DHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYV----VKYNSKMKRDERTLKN 316

Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
               + IK++DFGS T++ + HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   
Sbjct: 317 ----TDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 372

Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
           G  +FQTH++ EHLAMMER+LGP+P HM+ +  +R  KYF    +LDW + +++   +R 
Sbjct: 373 GFTVFQTHDSKEHLAMMERILGPIPQHMIQKTRKR--KYFHHN-QLDWDEHSSAGRYVRR 429

Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             K L+    ++ H D     L DL++ +L YDP +R+   EAL+HPFF
Sbjct: 430 RCKPLK--EFMLCH-DEEHEKLFDLVRRMLEYDPTQRITLDEALQHPFF 475

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates SRSF1 and SRSF3. Required for the regulation of alternative splicing of MAPT/TAU. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49759|CLK1_HUMAN Dual specificity protein kinase CLK1 OS=Homo sapiens GN=CLK1 PE=1 SV=2

 Score =  308 bits (789), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 163/349 (46%), Positives = 232/349 (66%), Gaps = 16/349 (4%)

Query: 76  DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREA 134
           DD++GH +   G+ L+ R +I+  +GEG FG+VVEC D++     VA+KIV+++++Y EA
Sbjct: 143 DDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEA 202

Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A  EI VL+ L   D   T RCVQ+  WF++  HICIVFE LG S YDF+++N +  F +
Sbjct: 203 ARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRL 262

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
           D +R++  Q+ +SV F+H  +L HTDLKPENIL V ++Y +  + K      +D     N
Sbjct: 263 DHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKI----KRDERTLIN 318

Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                 IK++DFGS T++ + HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   
Sbjct: 319 ----PDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 374

Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
           G  +F TH++ EHLAMMER+LGPLP HM+ +  +R  KYF    RLDW + +++   +  
Sbjct: 375 GFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKR--KYFHHD-RLDWDEHSSAGRYVSR 431

Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             K L+   ++ Q V+H    L DL+Q +L YDPA+R+  REAL+HPFF
Sbjct: 432 RCKPLK-EFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 477

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates: SRSF1, SRSF3 and PTPN1. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells and adenovirus E1A pre-mRNA.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	438
147800314	448	hypothetical protein VITISV_001943 [Viti	0.963	0.941	0.892	0.0
225439856	429	PREDICTED: serine/threonine-protein kina	0.968	0.988	0.892	0.0
224138498	433	predicted protein [Populus trichocarpa]	0.963	0.974	0.877	0.0
449439982	428	PREDICTED: serine/threonine-protein kina	0.977	1.0	0.885	0.0
449439980	433	PREDICTED: serine/threonine-protein kina	0.977	0.988	0.885	0.0
356505140	427	PREDICTED: serine/threonine-protein kina	0.961	0.985	0.848	0.0
356505138	444	PREDICTED: serine/threonine-protein kina	0.977	0.963	0.835	0.0
15231839	467	serine/threonine-protein kinase AFC1 [Ar	0.968	0.907	0.834	0.0
601787	467	protein kinase [Arabidopsis thaliana]	0.968	0.907	0.832	0.0
255638456	444	unknown [Glycine max]	0.977	0.963	0.829	0.0

>gi|147800314|emb|CAN73108.1| hypothetical protein VITISV_001943 [Vitis vinifera]

 Score =  778 bits (2010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/426 (89%), Positives = 407/426 (95%), Gaps = 4/426 (0%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSM 60
           METQRI EFPHKNMDKRPRKRPRLTWD+PPPLPPPKV+P +YC QEF    + NY  SS+
Sbjct: 1   METQRITEFPHKNMDKRPRKRPRLTWDMPPPLPPPKVVPGMYCSQEF----VSNYPYSSL 56

Query: 61  FYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELV 120
           FY  + R GSPPWRPDDKDGHY+FAIGENLTPR +I+SKMGEGTFGQV+ECFDN+KKE+V
Sbjct: 57  FYKGVTRNGSPPWRPDDKDGHYIFAIGENLTPRYRIISKMGEGTFGQVLECFDNDKKEVV 116

Query: 121 AIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 180
           AIKIVRSI+KYREAAMIEIDVLQ+LARHD+GGTRCVQIRNWFDYRNHICIVFEKLGPSLY
Sbjct: 117 AIKIVRSIHKYREAAMIEIDVLQKLARHDVGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 176

Query: 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240
           DFLRKNSYRSFPIDLVRELGRQLLESVAFMH+LRLIHTDLKPENILLVS++Y+KVPDYKF
Sbjct: 177 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHDLRLIHTDLKPENILLVSSDYIKVPDYKF 236

Query: 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCD 300
           LSR+ KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH+YVVSTRHYRAPEVILGLGWNYPCD
Sbjct: 237 LSRTIKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYVVSTRHYRAPEVILGLGWNYPCD 296

Query: 301 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 360
           LWSVGCIL+ELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRRAEKYFRRGARLD
Sbjct: 297 LWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPQHMVLRADRRAEKYFRRGARLD 356

Query: 361 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 420
           WP+GATSR+SMRAVWKL RL NL+MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP
Sbjct: 357 WPEGATSRESMRAVWKLPRLQNLVMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 416

Query: 421 FFTRDV 426
           FFTRD+
Sbjct: 417 FFTRDI 422

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439856|ref|XP_002278124.1| PREDICTED: serine/threonine-protein kinase AFC1 [Vitis vinifera] gi|297741539|emb|CBI32671.3| unnamed protein product [Vitis vinifera]

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/428 (89%), Positives = 408/428 (95%), Gaps = 4/428 (0%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSM 60
           METQRI EFPHKNMDKRPRKRPRLTWD+PPPLPPPKV+P +YC QEF    + NY  SS+
Sbjct: 1   METQRITEFPHKNMDKRPRKRPRLTWDMPPPLPPPKVVPGMYCSQEF----VSNYPYSSL 56

Query: 61  FYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELV 120
           FY  + R GSPPWRPDDKDGHY+FAIGENLTPR +I+SKMGEGTFGQV+ECFDN+KKE+V
Sbjct: 57  FYKGVTRNGSPPWRPDDKDGHYIFAIGENLTPRYRIISKMGEGTFGQVLECFDNDKKEVV 116

Query: 121 AIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 180
           AIKIVRSI+KYREAAMIEIDVLQ+LARHD+GGTRCVQIRNWFDYRNHICIVFEKLGPSLY
Sbjct: 117 AIKIVRSIHKYREAAMIEIDVLQKLARHDVGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 176

Query: 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240
           DFLRKNSYRSFPIDLVRELGRQLLESVAFMH+LRLIHTDLKPENILLVS++Y+KVPDYKF
Sbjct: 177 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHDLRLIHTDLKPENILLVSSDYIKVPDYKF 236

Query: 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCD 300
           LSR+ KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH+YVVSTRHYRAPEVILGLGWNYPCD
Sbjct: 237 LSRTIKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYVVSTRHYRAPEVILGLGWNYPCD 296

Query: 301 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 360
           LWSVGCIL+ELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRRAEKYFRRGARLD
Sbjct: 297 LWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPLPQHMVLRADRRAEKYFRRGARLD 356

Query: 361 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 420
           WP+GATSR+SMRAVWKL RL NL+MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP
Sbjct: 357 WPEGATSRESMRAVWKLPRLQNLVMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 416

Query: 421 FFTRDVRR 428
           FFTRD RR
Sbjct: 417 FFTRDARR 424

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138498|ref|XP_002322829.1| predicted protein [Populus trichocarpa] gi|222867459|gb|EEF04590.1| predicted protein [Populus trichocarpa]

 Score =  775 bits (2001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/434 (87%), Positives = 404/434 (93%), Gaps = 12/434 (2%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPP----LPPPKVLPALYCVQEFGNGG--MPN 54
           METQRI EFPHKNMDKRPRKR RLTWD+PPP    L P KV+P ++C QEFGNG   +PN
Sbjct: 1   METQRITEFPHKNMDKRPRKRQRLTWDIPPPPPPFLAPAKVVPGMFCGQEFGNGNGVIPN 60

Query: 55  YACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDN 114
           Y    +FY    R GSPPWRPDDKDGHYVFAIG+NLTPR +ILSKMGEGTFGQV+ECFDN
Sbjct: 61  YG---LFYN---RNGSPPWRPDDKDGHYVFAIGDNLTPRYRILSKMGEGTFGQVLECFDN 114

Query: 115 EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK 174
           EKKELVAIKIVRSI+KYREAAM EIDVLQRLARHDIG TRCVQIRNWFDYRNHICIVFEK
Sbjct: 115 EKKELVAIKIVRSIHKYREAAMTEIDVLQRLARHDIGSTRCVQIRNWFDYRNHICIVFEK 174

Query: 175 LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 234
           LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH+L LIHTDLKPENILLVS+EY+K
Sbjct: 175 LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHDLHLIHTDLKPENILLVSSEYIK 234

Query: 235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG 294
           VPDYKFLSRS+KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG
Sbjct: 235 VPDYKFLSRSTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG 294

Query: 295 WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFR 354
           WNYPCD+WSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRRAEKYFR
Sbjct: 295 WNYPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPQHMVVRADRRAEKYFR 354

Query: 355 RGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR 414
           RG RLDWP+GATSR+SM+AV KL RLPNLIMQHVDHSAG+LIDLLQGLLR+DPAERLKAR
Sbjct: 355 RGMRLDWPEGATSRESMKAVMKLPRLPNLIMQHVDHSAGELIDLLQGLLRHDPAERLKAR 414

Query: 415 EALRHPFFTRDVRR 428
           EALRHPFF+RD+RR
Sbjct: 415 EALRHPFFSRDLRR 428

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439982|ref|XP_004137764.1| PREDICTED: serine/threonine-protein kinase AFC1-like isoform 2 [Cucumis sativus]

 Score =  770 bits (1988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/428 (88%), Positives = 402/428 (93%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSM 60
           METQRIIEFPHKNMDKRPRKR RL WD+PPP+PPPKVLP  YC QEFGNG +PNYA  SM
Sbjct: 1   METQRIIEFPHKNMDKRPRKRQRLAWDMPPPVPPPKVLPPPYCGQEFGNGQVPNYAYPSM 60

Query: 61  FYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELV 120
           +    PR GSPPWRPD+KDGHYVF+IGE LTPR  ILSKMGEGTFGQV+EC D+EKKE+V
Sbjct: 61  YCRGAPRVGSPPWRPDNKDGHYVFSIGECLTPRYTILSKMGEGTFGQVLECLDSEKKEVV 120

Query: 121 AIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 180
           AIKIVRSI+KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY
Sbjct: 121 AIKIVRSISKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 180

Query: 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240
           DFLRKNSYRSFPIDLVRE  RQLLESVAFMHELRLIHTDLKPENILLVS+E+++VPD+KF
Sbjct: 181 DFLRKNSYRSFPIDLVREFARQLLESVAFMHELRLIHTDLKPENILLVSSEFIRVPDHKF 240

Query: 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCD 300
           LSRS KDGSYFKNLPKS+AIKLIDFGSTT EHQDHSY+VSTRHYRAPEVILGLGWNYPCD
Sbjct: 241 LSRSVKDGSYFKNLPKSAAIKLIDFGSTTTEHQDHSYIVSTRHYRAPEVILGLGWNYPCD 300

Query: 301 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 360
           LWSVGCILVELCSGEALFQTHENLEHLAMME+VLGPLP HMV+RADRRAEKYFRRG +LD
Sbjct: 301 LWSVGCILVELCSGEALFQTHENLEHLAMMEKVLGPLPQHMVLRADRRAEKYFRRGMQLD 360

Query: 361 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 420
           WP  ATSR+SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP+ERL AREALRHP
Sbjct: 361 WPQSATSRESMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPSERLMAREALRHP 420

Query: 421 FFTRDVRR 428
           FFTRD+RR
Sbjct: 421 FFTRDLRR 428

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439980|ref|XP_004137763.1| PREDICTED: serine/threonine-protein kinase AFC1-like isoform 1 [Cucumis sativus]

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/428 (88%), Positives = 402/428 (93%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSM 60
           METQRIIEFPHKNMDKRPRKR RL WD+PPP+PPPKVLP  YC QEFGNG +PNYA  SM
Sbjct: 1   METQRIIEFPHKNMDKRPRKRQRLAWDMPPPVPPPKVLPPPYCGQEFGNGQVPNYAYPSM 60

Query: 61  FYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELV 120
           +    PR GSPPWRPD+KDGHYVF+IGE LTPR  ILSKMGEGTFGQV+EC D+EKKE+V
Sbjct: 61  YCRGAPRVGSPPWRPDNKDGHYVFSIGECLTPRYTILSKMGEGTFGQVLECLDSEKKEVV 120

Query: 121 AIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 180
           AIKIVRSI+KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY
Sbjct: 121 AIKIVRSISKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 180

Query: 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240
           DFLRKNSYRSFPIDLVRE  RQLLESVAFMHELRLIHTDLKPENILLVS+E+++VPD+KF
Sbjct: 181 DFLRKNSYRSFPIDLVREFARQLLESVAFMHELRLIHTDLKPENILLVSSEFIRVPDHKF 240

Query: 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCD 300
           LSRS KDGSYFKNLPKS+AIKLIDFGSTT EHQDHSY+VSTRHYRAPEVILGLGWNYPCD
Sbjct: 241 LSRSVKDGSYFKNLPKSAAIKLIDFGSTTTEHQDHSYIVSTRHYRAPEVILGLGWNYPCD 300

Query: 301 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 360
           LWSVGCILVELCSGEALFQTHENLEHLAMME+VLGPLP HMV+RADRRAEKYFRRG +LD
Sbjct: 301 LWSVGCILVELCSGEALFQTHENLEHLAMMEKVLGPLPQHMVLRADRRAEKYFRRGMQLD 360

Query: 361 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 420
           WP  ATSR+SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP+ERL AREALRHP
Sbjct: 361 WPQSATSRESMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPSERLMAREALRHP 420

Query: 421 FFTRDVRR 428
           FFTRD+RR
Sbjct: 421 FFTRDLRR 428

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505140|ref|XP_003521350.1| PREDICTED: serine/threonine-protein kinase AFC1-like isoform 2 [Glycine max]

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/429 (84%), Positives = 394/429 (91%), Gaps = 8/429 (1%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSM 60
           METQRIIEFPH+NMDKRPRK+ RLTWD+        VLP +YC QE GNG +PN+A  S+
Sbjct: 1   METQRIIEFPHRNMDKRPRKKQRLTWDM-------HVLPTMYCKQEVGNGVVPNHAYPSL 53

Query: 61  FYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELV 120
           FY  +PR GSPPWRPDDKDGHYVFA+GENLTPR KILSKMGEGTFGQV+EC DNEK+E+V
Sbjct: 54  FYRGMPRNGSPPWRPDDKDGHYVFAVGENLTPRYKILSKMGEGTFGQVLECLDNEKEEIV 113

Query: 121 AIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 180
           AIK+VRSINKYREAA  EI+VL RLARHD+ G  CVQIRNWFDYRNHICIVFEKLGPSLY
Sbjct: 114 AIKVVRSINKYREAARTEIEVLLRLARHDVDGAHCVQIRNWFDYRNHICIVFEKLGPSLY 173

Query: 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240
           DFLRKNSYRSFPIDLVRE GRQLLESVAFMH+L LIHTDLKPENILL+S+E++KVPDYKF
Sbjct: 174 DFLRKNSYRSFPIDLVREFGRQLLESVAFMHDLCLIHTDLKPENILLISSEFIKVPDYKF 233

Query: 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCD 300
           LSR++KDGSYFKNLPKSSAIKLIDFGST+FEHQDHSYVVSTRHYRAPEVILGLGWNYPCD
Sbjct: 234 LSRNTKDGSYFKNLPKSSAIKLIDFGSTSFEHQDHSYVVSTRHYRAPEVILGLGWNYPCD 293

Query: 301 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 360
           LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRRAEKYF+RG RL 
Sbjct: 294 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVVRADRRAEKYFKRGTRLS 353

Query: 361 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 420
           WPD +TSR+SMRAVWKL RLPNLIMQHVDHSAGDLIDLLQGLLRYDP+ERLKA+EALRHP
Sbjct: 354 WPDSSTSRESMRAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPSERLKAKEALRHP 413

Query: 421 -FFTRDVRR 428
            FFTRD +R
Sbjct: 414 FFFTRDTKR 422

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505138|ref|XP_003521349.1| PREDICTED: serine/threonine-protein kinase AFC1-like isoform 1 [Glycine max]

 Score =  758 bits (1956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/439 (83%), Positives = 398/439 (90%), Gaps = 11/439 (2%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDV----------PPPLPPPKVLPALYCVQEFGNG 50
           METQRIIEFPH+NMDKRPRK+ RLTWD+          P P P  +VLP +YC QE GNG
Sbjct: 1   METQRIIEFPHRNMDKRPRKKQRLTWDMHVPPPPPPPPPLPPPKLQVLPTMYCKQEVGNG 60

Query: 51  GMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVE 110
            +PN+A  S+FY  +PR GSPPWRPDDKDGHYVFA+GENLTPR KILSKMGEGTFGQV+E
Sbjct: 61  VVPNHAYPSLFYRGMPRNGSPPWRPDDKDGHYVFAVGENLTPRYKILSKMGEGTFGQVLE 120

Query: 111 CFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170
           C DNEK+E+VAIK+VRSINKYREAA  EI+VL RLARHD+ G  CVQIRNWFDYRNHICI
Sbjct: 121 CLDNEKEEIVAIKVVRSINKYREAARTEIEVLLRLARHDVDGAHCVQIRNWFDYRNHICI 180

Query: 171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA 230
           VFEKLGPSLYDFLRKNSYRSFPIDLVRE GRQLLESVAFMH+L LIHTDLKPENILL+S+
Sbjct: 181 VFEKLGPSLYDFLRKNSYRSFPIDLVREFGRQLLESVAFMHDLCLIHTDLKPENILLISS 240

Query: 231 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI 290
           E++KVPDYKFLSR++KDGSYFKNLPKSSAIKLIDFGST+FEHQDHSYVVSTRHYRAPEVI
Sbjct: 241 EFIKVPDYKFLSRNTKDGSYFKNLPKSSAIKLIDFGSTSFEHQDHSYVVSTRHYRAPEVI 300

Query: 291 LGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAE 350
           LGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRRAE
Sbjct: 301 LGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVVRADRRAE 360

Query: 351 KYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER 410
           KYF+RG RL WPD +TSR+SMRAVWKL RLPNLIMQHVDHSAGDLIDLLQGLLRYDP+ER
Sbjct: 361 KYFKRGTRLSWPDSSTSRESMRAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPSER 420

Query: 411 LKAREALRHP-FFTRDVRR 428
           LKA+EALRHP FFTRD +R
Sbjct: 421 LKAKEALRHPFFFTRDTKR 439

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231839|ref|NP_190925.1| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] gi|42570490|ref|NP_850695.2| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] gi|79314891|ref|NP_001030853.1| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] gi|26454604|sp|P51566.2|AFC1_ARATH RecName: Full=Serine/threonine-protein kinase AFC1 gi|642132|dbj|BAA08215.1| protein kinase [Arabidopsis thaliana] gi|6729508|emb|CAB67664.1| protein kinase (AME2/AFC1) [Arabidopsis thaliana] gi|222424132|dbj|BAH20025.1| AT3G53570 [Arabidopsis thaliana] gi|332645589|gb|AEE79110.1| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] gi|332645590|gb|AEE79111.1| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] gi|332645591|gb|AEE79112.1| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana]

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/429 (83%), Positives = 393/429 (91%), Gaps = 5/429 (1%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVL-----PALYCVQEFGNGGMPNY 55
           +ETQR +EFPH+ +DKRPRKRPRLTWD  PPL PP        P LY   EF +G +PN+
Sbjct: 17  LETQRNVEFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNF 76

Query: 56  ACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNE 115
              +MFY  +PR GSPPWRPDDKDGHYVF +G+ LTPR +ILSKMGEGTFGQV+ECFDN+
Sbjct: 77  VYPNMFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFDNK 136

Query: 116 KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175
            KE+VAIK++RSINKYREAAMIEIDVLQRL RHD+GG+RCVQIRNWFDYRNHICIVFEKL
Sbjct: 137 NKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKL 196

Query: 176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 235
           GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA+MH+LRLIHTDLKPENILLVS+EY+K+
Sbjct: 197 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKI 256

Query: 236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW 295
           PDYKFLSR +KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH+Y+VSTRHYRAPEVILG+GW
Sbjct: 257 PDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYRAPEVILGVGW 316

Query: 296 NYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 355
           NYPCDLWS+GCILVELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRR+EKYFRR
Sbjct: 317 NYPCDLWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVLRADRRSEKYFRR 376

Query: 356 GARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE 415
           GA+LDWP+GATSRDS++AVWKL RLPNLIMQHVDHSAGDLIDLLQGLLRYDP ER KARE
Sbjct: 377 GAKLDWPEGATSRDSLKAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPTERFKARE 436

Query: 416 ALRHPFFTR 424
           AL HPFFTR
Sbjct: 437 ALNHPFFTR 445

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|601787|gb|AAA57117.1| protein kinase [Arabidopsis thaliana]

 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/429 (83%), Positives = 393/429 (91%), Gaps = 5/429 (1%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVL-----PALYCVQEFGNGGMPNY 55
           +ETQR +EFPH+ +DKRPRKRPRLTWD  PPL PP        P LY   EF +G +PN+
Sbjct: 17  LETQRNVEFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNF 76

Query: 56  ACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNE 115
              +MFY  +PR GSPPWRPDDKDGHYVF +G+ LTPR ++LSKMGEGTFGQV+ECFDN+
Sbjct: 77  VYPNMFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQMLSKMGEGTFGQVLECFDNK 136

Query: 116 KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175
            KE+VAIK++RSINKYREAAMIEIDVLQRL RHD+GG+RCVQIRNWFDYRNHICIVFEKL
Sbjct: 137 NKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKL 196

Query: 176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 235
           GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA+MH+LRLIHTDLKPENILLVS+EY+K+
Sbjct: 197 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKI 256

Query: 236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW 295
           PDYKFLSR +KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH+Y+VSTRHYRAPEVILG+GW
Sbjct: 257 PDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYRAPEVILGVGW 316

Query: 296 NYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 355
           NYPCDLWS+GCILVELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRR+EKYFRR
Sbjct: 317 NYPCDLWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVLRADRRSEKYFRR 376

Query: 356 GARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE 415
           GA+LDWP+GATSRDS++AVWKL RLPNLIMQHVDHSAGDLIDLLQGLLRYDP ER KARE
Sbjct: 377 GAKLDWPEGATSRDSLKAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPTERFKARE 436

Query: 416 ALRHPFFTR 424
           AL HPFFTR
Sbjct: 437 ALNHPFFTR 445

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638456|gb|ACU19537.1| unknown [Glycine max]

 Score =  749 bits (1934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/439 (82%), Positives = 395/439 (89%), Gaps = 11/439 (2%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDV----------PPPLPPPKVLPALYCVQEFGNG 50
           METQRIIEFPH+NMDKRPRK+ RLTWD+          P P P  +VLP +YC QE GNG
Sbjct: 1   METQRIIEFPHRNMDKRPRKKQRLTWDMHVPPPPPPPPPLPPPKLQVLPTMYCKQEVGNG 60

Query: 51  GMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVE 110
            +PN+A  S+FY  +PR GSPPWRPDDKDGHYVFA+GENLTPR KILSKMGEGTFGQV+E
Sbjct: 61  VVPNHAYPSLFYRGMPRNGSPPWRPDDKDGHYVFAVGENLTPRYKILSKMGEGTFGQVLE 120

Query: 111 CFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170
           C DNEK+E+VAIK+VRSINKYREAA  EI+VL RLARHD+ G  CVQIRNWFDYRNHICI
Sbjct: 121 CLDNEKEEIVAIKVVRSINKYREAARTEIEVLLRLARHDVDGAHCVQIRNWFDYRNHICI 180

Query: 171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA 230
           VFEKLGPSLYDFLRKN YRSFPIDLVRE GRQLLESVAFMH+L LIHTDLKPENILL+S+
Sbjct: 181 VFEKLGPSLYDFLRKNCYRSFPIDLVREFGRQLLESVAFMHDLCLIHTDLKPENILLISS 240

Query: 231 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI 290
           E++KVPDYKFLSR++KDGSYFKNLPKSSAIKLIDFGST+FEHQDHSYVVSTRHYRAPEVI
Sbjct: 241 EFIKVPDYKFLSRNTKDGSYFKNLPKSSAIKLIDFGSTSFEHQDHSYVVSTRHYRAPEVI 300

Query: 291 LGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAE 350
           LGLGWNYPCDLWSVGCILVELCSGEALFQTHENL HLAMMERVLGPLP HMV+RADRRAE
Sbjct: 301 LGLGWNYPCDLWSVGCILVELCSGEALFQTHENLGHLAMMERVLGPLPPHMVVRADRRAE 360

Query: 351 KYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER 410
           KYF+RG RL WPD +TSR+SMRAVWKL RLPNLIMQHVDH AGDLIDLLQGLLRYDP+ER
Sbjct: 361 KYFKRGTRLSWPDSSTSRESMRAVWKLPRLPNLIMQHVDHFAGDLIDLLQGLLRYDPSER 420

Query: 411 LKAREALRHP-FFTRDVRR 428
           LKA+EALRHP FFTRD +R
Sbjct: 421 LKAKEALRHPFFFTRDTKR 439

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	438
TAIR|locus:2084006	467	FC1 "FUS3-complementing gene 1	0.968	0.907	0.820	2e-198
TAIR|locus:2121984	427	FC2 "FUS3-complementing gene 2	0.956	0.981	0.706	6e-167
TAIR|locus:2125622	400	AME3 [Arabidopsis thaliana (ta	0.817	0.895	0.686	3.9e-140
UNIPROTKB|F1RLJ5	500	CLK2 "Uncharacterized protein"	0.764	0.67	0.484	4.9e-85
UNIPROTKB|E1B9Q2	500	CLK2 "Uncharacterized protein"	0.764	0.67	0.484	6.2e-85
UNIPROTKB|F1P919	612	CLK2 "Uncharacterized protein"	0.764	0.547	0.484	6.2e-85
UNIPROTKB|B1AVT0	497	CLK2 "Dual-specificity protein	0.764	0.674	0.484	6.2e-85
UNIPROTKB|P49760	499	CLK2 "Dual specificity protein	0.764	0.671	0.484	6.2e-85
POMBASE|SPAC1D4.11c	690	lkh1 "dual specificity protein	0.794	0.504	0.461	6.2e-85
FB|FBgn0259220	832	Doa "Darkener of apricot" [Dro	0.769	0.405	0.473	6.4e-85

TAIR|locus:2084006 FC1 "FUS3-complementing gene 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1921 (681.3 bits), Expect = 2.0e-198, P = 2.0e-198
 Identities = 352/429 (82%), Positives = 387/429 (90%)

Query:     1 METQRIIEFPHKNMDKRPRKRPRLTWDXXXXXXX-----XXXXXALYCVQEFGNGGMPNY 55
             +ETQR +EFPH+ +DKRPRKRPRLTWD                  LY   EF +G +PN+
Sbjct:    17 LETQRNVEFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNF 76

Query:    56 ACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNE 115
                +MFY  +PR GSPPWRPDDKDGHYVF +G+ LTPR +ILSKMGEGTFGQV+ECFDN+
Sbjct:    77 VYPNMFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFDNK 136

Query:   116 KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175
              KE+VAIK++RSINKYREAAMIEIDVLQRL RHD+GG+RCVQIRNWFDYRNHICIVFEKL
Sbjct:   137 NKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKL 196

Query:   176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 235
             GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA+MH+LRLIHTDLKPENILLVS+EY+K+
Sbjct:   197 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKI 256

Query:   236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW 295
             PDYKFLSR +KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH+Y+VSTRHYRAPEVILG+GW
Sbjct:   257 PDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYRAPEVILGVGW 316

Query:   296 NYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 355
             NYPCDLWS+GCILVELCSGEALFQTHENLEHLAMMERVLGPLP HMV+RADRR+EKYFRR
Sbjct:   317 NYPCDLWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVLRADRRSEKYFRR 376

Query:   356 GARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE 415
             GA+LDWP+GATSRDS++AVWKL RLPNLIMQHVDHSAGDLIDLLQGLLRYDP ER KARE
Sbjct:   377 GAKLDWPEGATSRDSLKAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPTERFKARE 436

Query:   416 ALRHPFFTR 424
             AL HPFFTR
Sbjct:   437 ALNHPFFTR 445

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0045727 "positive regulation of translation" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2121984 FC2 "FUS3-complementing gene 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1624 (576.7 bits), Expect = 6.0e-167, P = 6.0e-167
 Identities = 304/430 (70%), Positives = 357/430 (83%)

Query:     1 METQRIIEFPHKNMDKRPRKRPRLTWDXXXXXXXXXXXXALYCVQEFGN------GGMPN 54
             ME +R+ EFPH +MD+RPRKR RL WD             ++C QE GN       G P+
Sbjct:     1 MEMERVHEFPHTHMDRRPRKRARLGWDVLPQATKAQV--GMFCGQEIGNISSFASSGAPS 58

Query:    55 YACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDN 114
                SS+    + R GSPPWR DDKDGHY+F +G++LTPR KI SKMGEGTFGQV+EC+D 
Sbjct:    59 DNSSSLCVKGVARNGSPPWREDDKDGHYIFELGDDLTPRYKIYSKMGEGTFGQVLECWDR 118

Query:   115 EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK 174
             E+KE+VA+KIVR + KYREAAMIEI++LQ+L +HD GG RCVQIRNWFDYRNHICIVFEK
Sbjct:   119 ERKEMVAVKIVRGVKKYREAAMIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEK 178

Query:   175 LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 234
             LG SLYDFLRKN+YRSFPIDLVRE+G QLLE VAFMH+LR+IHTDLKPENILLVS++YVK
Sbjct:   179 LGSSLYDFLRKNNYRSFPIDLVREIGWQLLECVAFMHDLRMIHTDLKPENILLVSSDYVK 238

Query:   235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG 294
             +P+YK  SR  +D  Y K +PKSSAIK+IDFGSTT+E QD +Y+VSTRHYRAPEVILGLG
Sbjct:   239 IPEYKG-SRLQRDVCY-KRVPKSSAIKVIDFGSTTYERQDQTYIVSTRHYRAPEVILGLG 296

Query:   295 WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFR 354
             W+YPCD+WSVGCI+VELC+GEALFQTHENLEHLAMMERVLGP P  M+ + DR +EKY R
Sbjct:   297 WSYPCDVWSVGCIIVELCTGEALFQTHENLEHLAMMERVLGPFPQQMLKKVDRHSEKYVR 356

Query:   355 RGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR 414
             RG RLDWPDGATSRDS++AV KL RL NLIMQHVDHSAG+LI+++QGLLR+DP+ER+ AR
Sbjct:   357 RG-RLDWPDGATSRDSLKAVLKLPRLQNLIMQHVDHSAGELINMVQGLLRFDPSERITAR 415

Query:   415 EALRHPFFTR 424
             EALRHPFF R
Sbjct:   416 EALRHPFFAR 425

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0004672 "protein kinase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006397 "mRNA processing" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0045727 "positive regulation of translation" evidence=RCA

TAIR|locus:2125622 AME3 [Arabidopsis thaliana (taxid:3702)]

 Score = 1329 (472.9 bits), Expect = 3.9e-140, Sum P(2) = 3.9e-140
 Identities = 248/361 (68%), Positives = 302/361 (83%)

Query:    62 YGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVA 121
             +G+  R  SPP R DD+DGHYVF++ +NLTPR KILSKMGEGTFG+V+EC+D + KE VA
Sbjct:    39 HGSDGRILSPPLRDDDRDGHYVFSLRDNLTPRYKILSKMGEGTFGRVLECWDRDTKEYVA 98

Query:   122 IKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYD 181
             IKI+RSI KYR+AAMIEIDVLQ+L + D G TRCVQ++NWFDYRNHICIVFEKLGPSL+D
Sbjct:    99 IKIIRSIKKYRDAAMIEIDVLQKLVKSDKGRTRCVQMKNWFDYRNHICIVFEKLGPSLFD 158

Query:   182 FLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241
             FL++N Y +FP+ LVR+ G QLLESVA+MHEL+L+HTDLKPENILLVS+E VK+PD K  
Sbjct:   159 FLKRNKYSAFPLALVRDFGCQLLESVAYMHELQLVHTDLKPENILLVSSENVKLPDNK-- 216

Query:   242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDL 301
              RS+ + ++F+ LPKSSAIKLIDFGST  +++ H  +V TRHYR+PEVILGLGW+Y CDL
Sbjct:   217 -RSAANETHFRCLPKSSAIKLIDFGSTVCDNRIHHSIVQTRHYRSPEVILGLGWSYQCDL 275

Query:   302 WSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDW 361
             WS+GCIL ELC+GEALFQTH+NLEHLAMMER LGPLP HM  +A R AEKYFRRG RL+W
Sbjct:   276 WSIGCILFELCTGEALFQTHDNLEHLAMMERALGPLPEHMTRKASRGAEKYFRRGCRLNW 335

Query:   362 PDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
             P+GA SR+S+RAV +L RL +++ +HVD++     DLL GLL YDP+ERL A EAL HPF
Sbjct:   336 PEGANSRESIRAVKRLDRLKDMVSKHVDNTRSRFADLLYGLLAYDPSERLTANEALDHPF 395

Query:   422 F 422
             F
Sbjct:   396 F 396

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0045727 "positive regulation of translation" evidence=RCA

UNIPROTKB|F1RLJ5 CLK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
 Identities = 170/351 (48%), Positives = 240/351 (68%)

Query:    76 DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREA 134
             DD +GH ++ +G+ L  R +I+S +GEGTFG+VV+C D+ +    VA+KI++++ KY+EA
Sbjct:   145 DDAEGHLIYHVGDWLQERYEIISTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 204

Query:   135 AMIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
             A +EI+VL+++   D      CVQ+ +WFDY  H+CI FE LG S +DFL+ N+Y  +PI
Sbjct:   205 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 264

Query:   194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
               VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y     Y  L +   + S    
Sbjct:   265 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELT--YN-LEKKRDERSV--- 318

Query:   254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
               KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   
Sbjct:   319 --KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 376

Query:   314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
             G  LFQTH+N EHLAMMER+LGP+P  M IR  R+ +KYF RG RLDW +  ++   +R 
Sbjct:   377 GFTLFQTHDNREHLAMMERILGPIPSRM-IRKTRK-QKYFYRG-RLDWDENTSAGRYVRE 433

Query:   374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
               K LR   L  +  +H    L DL++ +L Y+PA+RL   EAL+HPFF R
Sbjct:   434 NCKPLRR-YLTSEAEEHH--QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045721 "negative regulation of gluconeogenesis" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E1B9Q2 CLK2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
 Identities = 170/351 (48%), Positives = 240/351 (68%)

Query:    76 DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREA 134
             DD +GH ++ +G+ L  R +I+S +GEGTFG+VV+C D+ +    VA+KI++++ KY+EA
Sbjct:   145 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 204

Query:   135 AMIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
             A +EI+VL+++   D      CVQ+ +WFDY  H+CI FE LG S +DFL+ N+Y  +PI
Sbjct:   205 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 264

Query:   194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
               VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y     Y  L +   + S    
Sbjct:   265 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELT--YN-LEKKRDERSV--- 318

Query:   254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
               KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   
Sbjct:   319 --KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 376

Query:   314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
             G  LFQTH+N EHLAMMER+LGP+P  M IR  R+ +KYF RG RLDW +  ++   +R 
Sbjct:   377 GFTLFQTHDNREHLAMMERILGPIPSRM-IRKTRK-QKYFYRG-RLDWDENTSAGRYVRE 433

Query:   374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
               K LR   L  +  +H    L DL++ +L Y+PA+RL   EAL+HPFF R
Sbjct:   434 NCKPLRR-YLTSEAEEHH--QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045721 "negative regulation of gluconeogenesis" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1P919 CLK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
 Identities = 170/351 (48%), Positives = 240/351 (68%)

Query:    76 DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREA 134
             DD +GH ++ +G+ L  R +I+S +GEGTFG+VV+C D+ +    VA+KI++++ KY+EA
Sbjct:   257 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 316

Query:   135 AMIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
             A +EI+VL+++   D      CVQ+ +WFDY  H+CI FE LG S +DFL+ N+Y  +PI
Sbjct:   317 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 376

Query:   194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
               VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y     Y  L +   + S    
Sbjct:   377 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELT--YN-LEKKRDERSV--- 430

Query:   254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
               KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   
Sbjct:   431 --KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 488

Query:   314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
             G  LFQTH+N EHLAMMER+LGP+P  M IR  R+ +KYF RG RLDW +  ++   +R 
Sbjct:   489 GFTLFQTHDNREHLAMMERILGPIPSRM-IRKTRK-QKYFYRG-RLDWDENTSAGRYVRE 545

Query:   374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
               K LR   L  +  +H    L DL++ +L Y+PA+RL   EAL+HPFF R
Sbjct:   546 NCKPLRR-YLTSEAEEHH--QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 593

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|B1AVT0 CLK2 "Dual-specificity protein kinase CLK2" [Homo sapiens (taxid:9606)]

 Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
 Identities = 170/351 (48%), Positives = 240/351 (68%)

Query:    76 DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREA 134
             DD +GH ++ +G+ L  R +I+S +GEGTFG+VV+C D+ +    VA+KI++++ KY+EA
Sbjct:   143 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 202

Query:   135 AMIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
             A +EI+VL+++   D      CVQ+ +WFDY  H+CI FE LG S +DFL+ N+Y  +PI
Sbjct:   203 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 262

Query:   194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
               VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y     Y  L +   + S    
Sbjct:   263 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELT--YN-LEKKRDERSV--- 316

Query:   254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
               KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   
Sbjct:   317 --KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 374

Query:   314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
             G  LFQTH+N EHLAMMER+LGP+P  M IR  R+ +KYF RG RLDW +  ++   +R 
Sbjct:   375 GFTLFQTHDNREHLAMMERILGPIPSRM-IRKTRK-QKYFYRG-RLDWDENTSAGRYVRE 431

Query:   374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
               K LR   L  +  +H    L DL++ +L Y+PA+RL   EAL+HPFF R
Sbjct:   432 NCKPLRR-YLTSEAEEHH--QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 479

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|P49760 CLK2 "Dual specificity protein kinase CLK2" [Homo sapiens (taxid:9606)]

 Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
 Identities = 170/351 (48%), Positives = 240/351 (68%)

Query:    76 DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREA 134
             DD +GH ++ +G+ L  R +I+S +GEGTFG+VV+C D+ +    VA+KI++++ KY+EA
Sbjct:   145 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 204

Query:   135 AMIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
             A +EI+VL+++   D      CVQ+ +WFDY  H+CI FE LG S +DFL+ N+Y  +PI
Sbjct:   205 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 264

Query:   194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
               VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y     Y  L +   + S    
Sbjct:   265 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELT--YN-LEKKRDERSV--- 318

Query:   254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
               KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   
Sbjct:   319 --KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 376

Query:   314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
             G  LFQTH+N EHLAMMER+LGP+P  M IR  R+ +KYF RG RLDW +  ++   +R 
Sbjct:   377 GFTLFQTHDNREHLAMMERILGPIPSRM-IRKTRK-QKYFYRG-RLDWDENTSAGRYVRE 433

Query:   374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
               K LR   L  +  +H    L DL++ +L Y+PA+RL   EAL+HPFF R
Sbjct:   434 NCKPLRR-YLTSEAEEHH--QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

GO:0005524 "ATP binding" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IDA

GO:0010212 "response to ionizing radiation" evidence=IMP

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0045721 "negative regulation of gluconeogenesis" evidence=ISS

GO:0046777 "protein autophosphorylation" evidence=ISS

POMBASE|SPAC1D4.11c lkh1 "dual specificity protein kinase Lkh1" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
 Identities = 167/362 (46%), Positives = 239/362 (66%)

Query:    68 TGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS 127
             T   P   DD DGHY          R  ++  +G GTFG+V++C+D       AIK+ R+
Sbjct:   336 TAFDPSTFDDDDGHYKVVPNSKFANRYTVVRLLGHGTFGKVIQCYDQSTGRHCAIKVTRA 395

Query:   128 INKYREAAMIEIDVLQRLARHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKN 186
             I KYREA++IE+ VLQ +A  D     +C+Q+R++FDYR HICIV +  G S++DFL+ N
Sbjct:   396 IPKYREASLIELRVLQTIAHSDPTNENKCIQLRDYFDYRKHICIVTDLFGWSVFDFLKNN 455

Query:   187 SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS--AEYVKVPDYKFLSRS 244
             +Y  FP+  ++ L +QL +SVAF+H L L+HTDLKPEN+LLVS  +  +++P Y+     
Sbjct:   456 NYIPFPLKHIQMLSQQLFKSVAFLHSLGLVHTDLKPENVLLVSNASRTIRLP-YR----- 509

Query:   245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSV 304
                 +Y + +  S  I+LIDFGS TFE + HS VVSTRHYRAPE+ILGLGW+YPCD+WS+
Sbjct:   510 ----NYSQKVLNSCEIRLIDFGSATFEDEYHSSVVSTRHYRAPEIILGLGWSYPCDVWSI 565

Query:   305 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDG 364
             GCILVEL +G+ALFQTHE+ EHL MME++LGP   +M+ R+ R ++++F+   ++ +P  
Sbjct:   566 GCILVELFTGQALFQTHEDSEHLCMMEKILGPFDRNMISRSSRTSQRFFKSDGKVRYPLS 625

Query:   365 ATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
              T + S+  +  L  L  +        A  L+DLL+ +  YDP  R+ A+EAL HPFFT+
Sbjct:   626 NTPKKSINYLQSLQTLEQIFAVSSPEVAL-LLDLLKKVFVYDPKRRITAKEALWHPFFTQ 684

Query:   425 DV 426
              +
Sbjct:   685 PI 686

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IMP;IDA

GO:0006468 "protein phosphorylation" evidence=IC

GO:0010590 "regulation of cytokinetic cell separation" evidence=IMP

GO:0032955 "regulation of barrier septum assembly" evidence=IMP

GO:0034599 "cellular response to oxidative stress" evidence=IMP

GO:0035556 "intracellular signal transduction" evidence=TAS

GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IMP

GO:0051519 "activation of bipolar cell growth" evidence=IMP

GO:0060237 "regulation of fungal-type cell wall organization" evidence=IMP

GO:0060257 "negative regulation of flocculation" evidence=IMP

GO:0060258 "negative regulation of filamentous growth" evidence=IMP

FB|FBgn0259220 Doa "Darkener of apricot" [Drosophila melanogaster (taxid:7227)]

 Score = 827 (296.2 bits), Expect = 6.4e-85, Sum P(2) = 6.4e-85
 Identities = 167/353 (47%), Positives = 236/353 (66%)

Query:    76 DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
             DD DGH ++  G+ L  R KI++ +GEGTFG+VV+  D E+   +A+KI++++ KYREAA
Sbjct:   461 DDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMERDYCMALKIIKNVEKYREAA 520

Query:   136 MIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
              +EI+ L+++A+ D      CV++ +WFDY  H+CIVFE LG S++DFLR+N+Y  +P+D
Sbjct:   521 KLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENNYEPYPLD 580

Query:   195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
              VR +  QL  SV F+H+ RL HTDLKPENIL V ++Y    ++K ++R  +        
Sbjct:   581 QVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHK-INREVRR------- 632

Query:   255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
              K++ ++LIDFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL EL  G
Sbjct:   633 VKNTDVRLIDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYLG 692

Query:   315 EALFQTHENLEHLAMMERVLGPLPHHMVIRA---DRRAEKYFRRGARLDWPDGATSRDSM 371
               LFQTH+N EHLAMMER+LG +P+ M        +   KYF  G +LDW + +++   +
Sbjct:   693 ITLFQTHDNREHLAMMERILGQIPYRMARNHTLYSKTKTKYFYHG-KLDWDEKSSAGRYV 751

Query:   372 RAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             R   K L L  L     DH   +L  L++ +L Y+P+ R+   EAL HPFF R
Sbjct:   752 RDHCKPLFLCQL-SDSEDHC--ELFSLIKKMLEYEPSSRITLGEALHHPFFDR 801

GO:0007399 "nervous system development" evidence=NAS;IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004672 "protein kinase activity" evidence=ISS;IDA

GO:0007350 "blastoderm segmentation" evidence=NAS;IMP

GO:0048749 "compound eye development" evidence=NAS;IMP

GO:0005634 "nucleus" evidence=IC;IDA;NAS

GO:0048477 "oogenesis" evidence=IMP

GO:0007417 "central nervous system development" evidence=NAS

GO:0008362 "chitin-based embryonic cuticle biosynthetic process" evidence=NAS

GO:0045494 "photoreceptor cell maintenance" evidence=NAS

GO:0007548 "sex differentiation" evidence=IGI;IMP

GO:0004674 "protein serine/threonine kinase activity" evidence=NAS;IDA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=NAS

GO:0042051 "compound eye photoreceptor development" evidence=IEP;IMP;NAS

GO:0008407 "chaeta morphogenesis" evidence=NAS

GO:0000165 "MAPK cascade" evidence=IGI

GO:0005737 "cytoplasm" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=NAS

GO:0048102 "autophagic cell death" evidence=IEP

GO:0035071 "salivary gland cell autophagic cell death" evidence=IEP

GO:0030717 "karyosome formation" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0000381 "regulation of alternative mRNA splicing, via spliceosome" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0009306 "protein secretion" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0048854 "brain morphogenesis" evidence=IMP

GO:0001964 "startle response" evidence=IMP

GO:0031987 "locomotion involved in locomotory behavior" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P51567	AFC2_ARATH	2, ., 7, ., 1, 2, ., 1	0.7139	0.9566	0.9812	no	no
P51566	AFC1_ARATH	2, ., 7, ., 1, 2, ., 1	0.8344	0.9680	0.9079	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.12.1	0.979
3rd Layer	2.7.12	0.983
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	438
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-70
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	2e-65
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-56
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	4e-51
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	9e-51
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-49
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	3e-48
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-47
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	7e-45
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-40
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-38
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-38
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	6e-36
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	1e-35
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	4e-35
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-33
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-32
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-32
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	5e-32
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	1e-31
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-31
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-31
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	3e-31
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	8e-31
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-30
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-30
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-30
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	1e-29
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-28
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	2e-28
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-27
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-27
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	6e-27
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	7e-27
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	7e-27
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	8e-27
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-26
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	2e-26
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	6e-26
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	6e-26
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	1e-25
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	2e-25
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	4e-25
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-24
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-24
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	7e-24
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-23
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	3e-23
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	3e-23
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	6e-23
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	8e-23
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	2e-22
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	4e-22
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	4e-22
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	4e-22
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	5e-22
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	1e-21
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	2e-21
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-21
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	3e-21
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	5e-21
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	5e-21
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	6e-21
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	1e-20
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-20
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-20
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-20
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	6e-20
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-19
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	2e-19
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	8e-19
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-18
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	2e-18
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	5e-18
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	8e-18
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	1e-17
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	2e-17
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	3e-17
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	3e-17
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	1e-16
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-16
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	8e-16
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-15
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	1e-15
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-15
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	2e-15
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	4e-15
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-15
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	5e-15
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	6e-15
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	7e-15
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-14
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-14
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-14
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	3e-14
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	3e-14
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	4e-14
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	7e-14
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	8e-14
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	1e-13
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-13
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-13
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	1e-13
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-13
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	2e-13
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-13
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-13
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	3e-13
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	4e-13
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	5e-13
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	1e-12
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-12
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-12
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-12
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	3e-12
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	4e-12
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	4e-12
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	5e-12
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	5e-12
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	5e-12
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	5e-12
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-12
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	6e-12
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	8e-12
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-11
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-11
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	4e-11
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	5e-11
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	6e-11
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	7e-11
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	7e-11
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	7e-11
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	9e-11
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	9e-11
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	1e-10
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	1e-10
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-10
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-10
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-10
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-10
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	2e-10
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-10
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	3e-10
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	3e-10
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	4e-10
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	4e-10
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	5e-10
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	6e-10
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-09
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	1e-09
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	1e-09
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-09
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-09
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	2e-09
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	3e-09
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	3e-09
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	3e-09
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	4e-09
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	4e-09
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	5e-09
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	5e-09
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	9e-09
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	9e-09
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	1e-08
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	1e-08
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	1e-08
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	2e-08
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-08
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	2e-08
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-08
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	2e-08
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-08
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	3e-08
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	3e-08
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	3e-08
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	3e-08
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	4e-08
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	4e-08
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	4e-08
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	4e-08
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	4e-08
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	5e-08
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	6e-08
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	6e-08
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	6e-08
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	7e-08
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	9e-08
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	1e-07
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	1e-07
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-07
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-07
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	2e-07
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-07
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	4e-07
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	4e-07
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	4e-07
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	5e-07
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	6e-07
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	7e-07
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	8e-07
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	8e-07
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	2e-06
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-06
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	2e-06
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-06
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	3e-06
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	4e-06
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	5e-06
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	5e-06
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	5e-06
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	6e-06
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	7e-06
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	7e-06
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	7e-06
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	8e-06
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	8e-06
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-05
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	1e-05
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	1e-05
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	1e-05
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	2e-05
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-05
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	2e-05
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-05
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	5e-05
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	5e-05
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	5e-05
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	7e-05
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	8e-05
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	9e-05
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	9e-05
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	3e-04
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	3e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	3e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	3e-04
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	4e-04
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	4e-04
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	4e-04
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	4e-04
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	4e-04
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	4e-04
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	7e-04
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	0.001
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.001
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	0.001
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	0.001
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	0.001
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	0.002
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	0.003
PRK14879	211	PRK14879, PRK14879, serine/threonine protein kinas	0.004
PHA02882	294	PHA02882, PHA02882, putative serine/threonine kina	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  223 bits (571), Expect = 1e-70
 Identities = 97/333 (29%), Positives = 146/333 (43%), Gaps = 85/333 (25%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDIGG 152
           +IL K+GEG+FG+V    D +  +LVAIK+++   I K RE  + EI +L++L +H    
Sbjct: 2   EILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKL-KHP--- 57

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++ + F+  + + +V E   G  L+D L+K        D  R   RQ+L ++ ++H
Sbjct: 58  -NIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKR--GRLSEDEARFYLRQILSALEYLH 114

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
              ++H DLKPENILL                  +DG           +KL DFG     
Sbjct: 115 SKGIVHRDLKPENILL-----------------DEDGH----------VKLADFGLARQL 147

Query: 272 HQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
                    V T  Y APEV+LG G+    D+WS+G IL EL +G+  F   + L    +
Sbjct: 148 DPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLL--EL 205

Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
            +++  P P                       P+   S                      
Sbjct: 206 FKKIGKPKPP-------------------FPPPEWDISP--------------------- 225

Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
               +  DL++ LL  DP +RL A EAL+HPFF
Sbjct: 226 ----EAKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score =  217 bits (553), Expect = 2e-65
 Identities = 129/358 (36%), Positives = 193/358 (53%), Gaps = 43/358 (12%)

Query: 78  KDGHYVFAIGENL---TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA 134
           ++GH+   +GE++   T R KILS +GEGTFG+VVE +D ++KE  A+KIVR++ KY   
Sbjct: 112 EEGHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRD 171

Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWF-DYRNHICIVFEKLGPSLYDFLRKNSYRSFP 192
           A IEI  ++++ + D       ++I+ +F +   H+CIV  K GP L D++ K+   S  
Sbjct: 172 AKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHGPFSH- 230

Query: 193 IDLVRELGRQLLESVA----FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
               R L + + ++      F  EL L+HTDLKPENIL+ +++            +  D 
Sbjct: 231 ----RHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSD------------TVVDP 274

Query: 249 SYFKNLPKSSA-IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 307
              + LP     +++ D G    E    + +VSTRHYR+PEV+LGLGW Y  D+WS+GCI
Sbjct: 275 VTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCI 334

Query: 308 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIR-ADRRAEKYFRRGARLDW---PD 363
           + EL +G+ L+ TH+NLEHL +ME+ LG LP     R     A   +    +L     P 
Sbjct: 335 IYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPK 394

Query: 364 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
                   R V +++R               L DL+ GLL YD  +RL AR+   HP+
Sbjct: 395 HLARIARARPVREVIRDDL------------LCDLIYGLLHYDRQKRLNARQMTTHPY 440

Length = 467

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  185 bits (473), Expect = 4e-56
 Identities = 90/337 (26%), Positives = 144/337 (42%), Gaps = 87/337 (25%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSIN-KYREAAMIEIDVLQRLARHD-I 150
           ++L K+G G+FG V +       ++VA+KI+  RS   K  + A  EI +L+RL  H  I
Sbjct: 2   ELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRL-SHPNI 60

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                V++ + F+ ++H+ +V E      L+D+L +        D  +++  Q+L  + +
Sbjct: 61  -----VRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRG--GPLSEDEAKKIALQILRGLEY 113

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 268
           +H   +IH DLKPENILL                                +K+ DFG + 
Sbjct: 114 LHSNGIIHRDLKPENILLDENGV---------------------------VKIADFGLAK 146

Query: 269 TFEHQDHSY--VVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
                  S    V T  Y APEV+L G G+    D+WS+G IL EL +G+  F     L+
Sbjct: 147 KLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILD 206

Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
            L ++ R+LGP                       D P  ++  +                
Sbjct: 207 QLQLIRRILGPPLE-------------------FDEPKWSSGSE---------------- 231

Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                   +  DL++  L  DP++R  A E L+HP+F
Sbjct: 232 --------EAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  173 bits (441), Expect = 4e-51
 Identities = 103/340 (30%), Positives = 157/340 (46%), Gaps = 63/340 (18%)

Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHD 149
           R KIL ++GEG  G V +  D E  E VA+K   + R        A+ EI  LQ      
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPY 60

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           +     V++ + F + +   +V E +   L + LR +  R  P   V+   R LL+ VA+
Sbjct: 61  V-----VKLLDVFPHGSGFVLVMEYMPSDLSEVLR-DEERPLPEAQVKSYMRMLLKGVAY 114

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           MH   ++H DLKP N+L+ +   +K+ D+  L+R   +                      
Sbjct: 115 MHANGIMHRDLKPANLLISADGVLKIADFG-LARLFSEE-----------------EPRL 156

Query: 270 FEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
           + HQ     V+TR YRAPE++ G   ++   DLW+VGCI  EL +G  LF    ++E LA
Sbjct: 157 YSHQ-----VATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLA 211

Query: 329 MMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN----L 383
           ++ R LG P                        WP   +  D     +  +  P      
Sbjct: 212 IVFRTLGTPNEE--------------------TWPGLTSLPD-----YNKITFPESKPIP 246

Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
           + +    ++ + +DLL+GLL YDP++RL A EALRHP+FT
Sbjct: 247 LEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  172 bits (439), Expect = 9e-51
 Identities = 95/336 (28%), Positives = 161/336 (47%), Gaps = 62/336 (18%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREA-AMIEIDVLQRLARHDIGG 152
           K++ ++G+GTFG V    + E  ELVAIK + +    + E   + E+  L++L  H    
Sbjct: 2   KVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHP--- 58

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              V+++  F   + +  VFE +  +LY  ++    + F   ++R +  Q+L+ +A +H+
Sbjct: 59  -NIVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK 117

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
               H DLKPEN+L+   E VK+ D+  L+R  +    +                T +  
Sbjct: 118 HGFFHRDLKPENLLVSGPEVVKIADFG-LAREIRSRPPY----------------TDY-- 158

Query: 273 QDHSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
                 VSTR YRAPE++L     + P D+W++GCI+ EL +   LF     ++ L  + 
Sbjct: 159 ------VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKIC 212

Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL-LRLPN----LIMQ 386
            VLG  P                     DWP+G       +   KL  R P      + Q
Sbjct: 213 SVLGT-PTKQ------------------DWPEG------YKLASKLGFRFPQFAPTSLHQ 247

Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
            + +++ + IDL++ +LR+DP +R  A +AL+HP+F
Sbjct: 248 LIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  169 bits (432), Expect = 1e-49
 Identities = 98/336 (29%), Positives = 159/336 (47%), Gaps = 67/336 (19%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARHD-IG 151
           L K+GEGT+G V +  D +  E+VA+K +R ++   E     A+ EI +L+ L +H  I 
Sbjct: 4   LEKLGEGTYGVVYKARDKKTGEIVALKKIR-LDNEEEGIPSTALREISLLKEL-KHPNI- 60

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               V++ +       + +VFE     L  +L K        +L++ +  QLL  +A+ H
Sbjct: 61  ----VKLLDVIHTERKLYLVFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCH 115

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF 270
             R++H DLKP+NIL+                 ++DG           +KL DFG +  F
Sbjct: 116 SHRILHRDLKPQNILI-----------------NRDGV----------LKLADFGLARAF 148

Query: 271 EHQDHSY--VVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                +Y   V T  YRAPE++LG   ++   D+WSVGCI  E+ +G+ LF     ++ L
Sbjct: 149 GIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQL 208

Query: 328 AMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
             + ++LG P                        WP G T     +  +     P  + +
Sbjct: 209 FKIFQILGTPTEE--------------------SWP-GVTKLPDYKPTFP-KFPPKDLEK 246

Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
            +     + IDLL  +L+Y+PA+R+ A+EAL+HP+F
Sbjct: 247 VLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score =  166 bits (422), Expect = 3e-48
 Identities = 98/333 (29%), Positives = 159/333 (47%), Gaps = 53/333 (15%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHDIG 151
           ++L  +GEG +G V++C +    E+VAIK           ++ A+ E+ VL++L   +I 
Sbjct: 4   EVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENI- 62

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               V ++  F  +  + +VFE +  +L + L  +     P D VR    QLL+++A+ H
Sbjct: 63  ----VNLKEAFRRKGRLYLVFEYVERTLLELLEASPG-GLPPDAVRSYIWQLLQAIAYCH 117

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
              +IH D+KPENIL+  +  +K+ D+ F           + L    A  L D+      
Sbjct: 118 SHNIIHRDIKPENILVSESGVLKLCDFGFA----------RALRARPASPLTDY------ 161

Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
                  V+TR YRAPE+++G   NY  P D+W++GCI+ EL  GE LF    +++ L +
Sbjct: 162 -------VATRWYRAPELLVG-DTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYL 213

Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
           +++ LGPLP              F   A  +        +S+       R P  +     
Sbjct: 214 IQKCLGPLPPSHQELFSS--NPRFAGVAFPEPSQ----PESL-----ERRYPGKV----- 257

Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             +   +D L+  LR DP ERL   E L+HP+F
Sbjct: 258 --SSPALDFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  163 bits (415), Expect = 2e-47
 Identities = 99/338 (29%), Positives = 151/338 (44%), Gaps = 66/338 (19%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIG 151
           + L K+GEGT+G V +  D    E+VAIK ++   +     + A+ EI +L+ L   +I 
Sbjct: 2   QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI- 60

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               +++ + F ++  + +VFE +   LY  ++    R  P  L++    QLL+ +AF H
Sbjct: 61  ----IKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCH 115

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
              ++H DLKPEN+L                           +     +KL DFG     
Sbjct: 116 SHGILHRDLKPENLL---------------------------INTEGVLKLADFGLARSF 148

Query: 272 HQDHSYV---VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                     V TR YRAPE++LG  G++ P D+WSVGCI  EL S   LF     ++ L
Sbjct: 149 GSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQL 208

Query: 328 AMMERVLG-PLPHHM-VIRADRRAEKY-FRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
             + R LG P P       +  R  K+ F + A +  P                  PN  
Sbjct: 209 FKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLP---------------KLFPNA- 252

Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                  +   +DLL  +L YDP +R+ A +AL HP+F
Sbjct: 253 -------SPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  155 bits (393), Expect = 7e-45
 Identities = 71/218 (32%), Positives = 105/218 (48%), Gaps = 39/218 (17%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           GEG FG V    D +  + VAIKI++    +   E  + EI++L++L  H       V++
Sbjct: 2   GEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKL-NHP----NIVKL 56

Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
              F+  NH+ +V E   G SL D L++N  +    D +  +  Q+LE + ++H   +IH
Sbjct: 57  YGVFEDENHLYLVMEYCEGGSLKDLLKENEGK-LSEDEILRILLQILEGLEYLHSNGIIH 115

Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DLKPENILL S                              +KL DFG +     D S 
Sbjct: 116 RDLKPENILLDSDNGK--------------------------VKLADFGLSKLLTSDKSL 149

Query: 278 VVS---TRHYRAPEVILGLG-WNYPCDLWSVGCILVEL 311
           + +   T  Y APEV+LG G ++   D+WS+G IL EL
Sbjct: 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score =  145 bits (368), Expect = 2e-40
 Identities = 100/338 (29%), Positives = 155/338 (45%), Gaps = 67/338 (19%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQRLARHD- 149
           KIL K+GEGTF +V++    +  +  AIK       ++    +    EI  L+RL+ H  
Sbjct: 2   KILGKIGEGTFSEVLKAQSRKTGKYYAIK--CMKKHFKSLEQVNNLREIQALRRLSPHPN 59

Query: 150 -IGGTRCVQIRNWFDYR-NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            +     +     FD +   + +VFE +  +LY+ + K   R  P   V+    QLL+S+
Sbjct: 60  ILRLIEVL-----FDRKTGRLALVFELMDMNLYELI-KGRKRPLPEKRVKSYMYQLLKSL 113

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
             MH   + H D+KPENIL+                            K   +KL DFGS
Sbjct: 114 DHMHRNGIFHRDIKPENILI----------------------------KDDILKLADFGS 145

Query: 268 --TTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENL 324
               +    ++  +STR YRAPE +L  G +    D+W+VGC+  E+ S   LF     L
Sbjct: 146 CRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL 205

Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
           + +A +  VLG  P       D    K FR+   ++  +  + + +   + KLL      
Sbjct: 206 DQIAKIHDVLG-TP-------DAEVLKKFRKSRHMN-YNFPSKKGT--GLRKLL------ 248

Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             +        +DLL+ LL YDP ER+ A++ALRHP+F
Sbjct: 249 -PNASAEG---LDLLKKLLAYDPDERITAKQALRHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score =  140 bits (355), Expect = 1e-38
 Identities = 98/342 (28%), Positives = 151/342 (44%), Gaps = 70/342 (20%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMI-EIDVLQRLARH-- 148
           + L+++GEG +G V +  D      VA+K VR      E    + + EI +L++L     
Sbjct: 2   EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEH 60

Query: 149 -------DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGR 201
                  D+    C   R   D    + +VFE +   L  +L K      P + +++L R
Sbjct: 61  PNIVRLLDV----CHGPRT--DRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMR 114

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           QLL  V F+H  R++H DLKP+NIL+ S   VK+ D+  L+R      Y   +  +S   
Sbjct: 115 QLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFG-LARI-----YSFEMALTS--- 165

Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                           VV T  YRAPEV+L   +  P D+WSVGCI  EL     LF+  
Sbjct: 166 ----------------VVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGT 209

Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRL 380
              + L  +  V+G LP                  +  +WP + +  R S  +     R 
Sbjct: 210 SEADQLDKIFDVIG-LP------------------SEEEWPRNVSLPRSSFPS--YTPRS 248

Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
               +  +        DLL+ +L ++P +R+ A EAL+HP+F
Sbjct: 249 FKSFVPEICEEGL---DLLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  140 bits (355), Expect = 2e-38
 Identities = 95/358 (26%), Positives = 152/358 (42%), Gaps = 102/358 (28%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMIEIDVLQRLARHDIG 151
           + ++++GEGT+GQV +  + +  ELVA+K +R  N+       A+ EI +LQ+L RH   
Sbjct: 2   EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKL-RHP-- 58

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLY--------DF---LRKNSYRSFPIDLVRELG 200
               V++           IV  K   S+Y        D    L     + F    ++   
Sbjct: 59  --NIVRL---------KEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVK-FTESQIKCYM 106

Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
           +QLLE + ++H   ++H D+K  NIL+                 + DG           +
Sbjct: 107 KQLLEGLQYLHSNGILHRDIKGSNILI-----------------NNDGV----------L 139

Query: 261 KLIDFG---STTFEH-QDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGE 315
           KL DFG     T  +  D++  V T  YR PE++LG   +    D+WSVGCIL EL  G+
Sbjct: 140 KLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGK 199

Query: 316 ALFQTHENLEHLAMMERVLGP-----------LPHHMVIRADRRAEKYFRRGARLDWPDG 364
            +FQ    LE L  +  + G            LP    ++  +  ++             
Sbjct: 200 PIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRL----------- 248

Query: 365 ATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
              R+  + +             +D SA   +DLL  LL  DP +R+ A +AL+H +F
Sbjct: 249 ---REFFKHL-------------IDPSA---LDLLDKLLTLDPKKRISADQALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score =  133 bits (337), Expect = 6e-36
 Identities = 97/340 (28%), Positives = 163/340 (47%), Gaps = 73/340 (21%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIK---------IVRSINKYREAAMIEIDVLQRLAR 147
           LSK+GEG++G V +C + E  ++VAIK         +++ I      A+ EI +L++L  
Sbjct: 6   LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKI------ALREIRMLKQLKH 59

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            ++     V +   F  +  + +VFE    ++ + L KN  R  P  L++++  Q L++V
Sbjct: 60  PNL-----VNLIEVFRRKRKLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAV 113

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 266
            F H+   IH D+KPENIL+                            K   IKL DFG 
Sbjct: 114 NFCHKHNCIHRDVKPENILIT---------------------------KQGQIKLCDFGF 146

Query: 267 STTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
           +         Y   V+TR YRAPE+++G   +  P D+W++GC+  EL +G+ L+    +
Sbjct: 147 ARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSD 206

Query: 324 LEHLAMMERVLGPL-PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
           ++ L ++ + LG L P H  I       ++F +G  +  P    +R+ + +     + PN
Sbjct: 207 VDQLYLIRKTLGDLIPRHQQI---FSTNQFF-KGLSIPEP---ETREPLES-----KFPN 254

Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           +        +   +  L+G L+ DP ERL   E L HP+F
Sbjct: 255 I--------SSPALSFLKGCLQMDPTERLSCEELLEHPYF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score =  132 bits (333), Expect = 1e-35
 Identities = 93/334 (27%), Positives = 166/334 (49%), Gaps = 56/334 (16%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIG 151
           ++L  +GEG +G V++C   E KE+VAIK  +      + +E  + E+ +L+ L + +I 
Sbjct: 4   EVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENI- 62

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               V+++  F  R  + +VFE +  ++ + L +      P + VR    QL++++ + H
Sbjct: 63  ----VELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPP-EKVRSYIYQLIKAIHWCH 117

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
           +  ++H D+KPEN+L+   + +K+ D+ F +R+  +GS                      
Sbjct: 118 KNDIVHRDIKPENLLISHNDVLKLCDFGF-ARNLSEGS---------------------- 154

Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
           + +++  V+TR YR+PE++LG  +    D+WSVGCIL EL  G+ LF     ++ L  ++
Sbjct: 155 NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQ 214

Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGAR---LDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
           +VLGPLP   +        K F    R   L +P     +   R    +L          
Sbjct: 215 KVLGPLPAEQM--------KLFYSNPRFHGLRFPAVNHPQSLERRYLGIL---------- 256

Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
              +G L+DL++ LL+ +P +R    + L HP F
Sbjct: 257 ---SGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =  131 bits (332), Expect = 4e-35
 Identities = 98/359 (27%), Positives = 151/359 (42%), Gaps = 88/359 (24%)

Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA------AMIEIDVLQRLA 146
           R +   K+GEGT+  V +  D E   +VAIK ++   +          A+ EI +LQ L 
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL- 59

Query: 147 RHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +H  I G   V     F ++++I +VFE +   L   ++  S    P D ++      L 
Sbjct: 60  KHPNIIGLLDV-----FGHKSNINLVFEFMETDLEKVIKDKSIVLTPAD-IKSYMLMTLR 113

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
            + ++H   ++H DLKP N+L+ S   +K+ D+  L+RS                    F
Sbjct: 114 GLEYLHSNWILHRDLKPNNLLIASDGVLKLADFG-LARS--------------------F 152

Query: 266 GS--TTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHE 322
           GS      HQ     V TR YRAPE++ G   +    D+WSVGCI  EL           
Sbjct: 153 GSPNRKMTHQ-----VVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS 207

Query: 323 NLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           +++ L  +   LG P                       +WP              +  LP
Sbjct: 208 DIDQLGKIFEALGTPTEE--------------------NWPG-------------VTSLP 234

Query: 382 N-LIMQHVDH--------SAG-DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
           + +  +            +A  D +DLLQ LL  +P +R+ AR+AL HP+F+ D   PT
Sbjct: 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP-APT 292

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score =  127 bits (321), Expect = 1e-33
 Identities = 99/338 (29%), Positives = 151/338 (44%), Gaps = 70/338 (20%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 5   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 61

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 62  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH 119

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST----- 268
           R++H DLKP+N+L+                 + +G          AIKL DFG       
Sbjct: 120 RVLHRDLKPQNLLI-----------------NTEG----------AIKLADFGLARAFGV 152

Query: 269 ---TFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENL 324
              T+ H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     +
Sbjct: 153 PVRTYTHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 207

Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
           + L  + R LG  P  +V         Y  + +   W      R     V     +P L 
Sbjct: 208 DQLFRIFRTLGT-PDEVVWPGVTSLPDY--KPSFPKWA-----RQDFSKV-----VPPL- 253

Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                    D  DLL  +L YDP +R+ A+ AL HPFF
Sbjct: 254 -------DEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  126 bits (317), Expect = 1e-32
 Identities = 87/347 (25%), Positives = 133/347 (38%), Gaps = 88/347 (25%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHDI 150
           +IL K+GEG+FG+V    D +    VA+K++     S +K  E  + EI +L  L     
Sbjct: 3   RILRKLGEGSFGEVYLARDRKL---VALKVLAKKLESKSKEVERFLREIQILASLNHPP- 58

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYR-SFPIDLVRELGRQLLESVA 208
                V++ ++F     + +V E + G SL D L+K   +          +  Q+L ++ 
Sbjct: 59  ---NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALE 115

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
           ++H   +IH D+KPENILL                                +KLIDFG  
Sbjct: 116 YLHSKGIIHRDIKPENILLD--------------------------RDGRVVKLIDFGLA 149

Query: 267 -------STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPC---DLWSVGCILVELCSGEA 316
                  ST+      S  V T  Y APEV+LGL   Y     D+WS+G  L EL +G  
Sbjct: 150 KLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLP 209

Query: 317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376
            F+  +N    +   +++  LP   +                                  
Sbjct: 210 PFEGEKNSSATSQTLKIILELPTPSL---------------------------------- 235

Query: 377 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                 L   + +  +    DLL+ LL  DP  RL +   L H    
Sbjct: 236 ---ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA 279

Length = 384

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  123 bits (310), Expect = 2e-32
 Identities = 80/334 (23%), Positives = 125/334 (37%), Gaps = 94/334 (28%)

Query: 101 GEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQ 157
           G G+FG V    D +  EL+A+K   +     +  EA   EI +L  L +H       V+
Sbjct: 9   GRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSL-QHP----NIVR 63

Query: 158 IR--NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                  + +N + I  E + G SL   L+K  +   P  ++R+  RQ+LE +A++H   
Sbjct: 64  YYGSERDEEKNTLNIFLEYVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNG 121

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG------ST 268
           ++H D+K  NIL+ S                              +KL DFG        
Sbjct: 122 IVHRDIKGANILVDS---------------------------DGVVKLADFGCAKRLGDI 154

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
                  S V  T ++ APEVI G  +    D+WS+GC ++E+ +G+             
Sbjct: 155 ETGEGTGS-VRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKP------------ 201

Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
                  P                                + M A++K+           
Sbjct: 202 -------PWSELG---------------------------NPMAALYKIGSSGEPPEIPE 227

Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             S  +  D L+  LR DP +R  A E L+HPF 
Sbjct: 228 HLSE-EAKDFLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  123 bits (312), Expect = 5e-32
 Identities = 87/351 (24%), Positives = 144/351 (41%), Gaps = 80/351 (22%)

Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--------YREAAMIEIDVLQR 144
           R ++L  +G G +G V    D      VAIK + ++           RE     I +L+ 
Sbjct: 1   RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILRE-----IKLLRH 55

Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGR--- 201
           L   +I G   +      +  N + IV E +   L+  ++       P  L  +  +   
Sbjct: 56  LRHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKS------PQPLTDDHIQYFL 109

Query: 202 -QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   +IH DLKP NIL+                         N   +  +
Sbjct: 110 YQILRGLKYLHSANVIHRDLKPSNILV-------------------------N--SNCDL 142

Query: 261 KLIDFG-----STTFEHQDH--SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELC 312
           K+ DFG         + +     YVV TR YRAPE++L    +    D+WSVGCI  EL 
Sbjct: 143 KICDFGLARGVDPDEDEKGFLTEYVV-TRWYRAPELLLSSSRYTKAIDIWSVGCIFAELL 201

Query: 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
           + + LF   + ++ L ++  VLG                       L +     +R+ ++
Sbjct: 202 TRKPLFPGRDYIDQLNLIVEVLGTPSEED-----------------LKFITSEKARNYLK 244

Query: 373 AVWKLLRLP-NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           ++ K  + P + +       A   IDLL+ +L +DP +R+ A EAL HP+ 
Sbjct: 245 SLPKKPKKPLSKLFPGASPEA---IDLLEKMLVFDPKKRITADEALAHPYL 292

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score =  122 bits (307), Expect = 1e-31
 Identities = 101/337 (29%), Positives = 148/337 (43%), Gaps = 59/337 (17%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---EAAMIEIDVLQRLARHDIGGT 153
           L K+GEGT+G+V +  D    +LVA+K  R           A+ EI +LQ L+   I   
Sbjct: 6   LEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLS-ESIYIV 64

Query: 154 RCVQIRNWFDYRNHICI--VFEKLGPSLYDFL---RKNSYRSFPIDLVRELGRQLLESVA 208
           R + + +  +      +  VFE L   L  F+    +   R  P   ++    QLL+ VA
Sbjct: 65  RLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVA 124

Query: 209 FMHELRLIHTDLKPENILL-VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
             H+  ++H DLKP+N+L+      +K+ D   L R+                  I   S
Sbjct: 125 HCHKHGVMHRDLKPQNLLVDKQKGLLKIADLG-LGRAFS----------------IPVKS 167

Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
            T E       + T  YRAPEV+LG   ++ P D+WSVGCI  E+   + LF     L+ 
Sbjct: 168 YTHE-------IVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ 220

Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-SMRAVWKLLRLPNLIM 385
           L  + ++LG  P   V                  WP  +  RD      WK   L   + 
Sbjct: 221 LLHIFKLLGT-PTEQV------------------WPGVSKLRDWHEFPQWKPQDLSRAVP 261

Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                     +DLLQ +LRYDPA+R+ A+ AL HP+F
Sbjct: 262 DLSPEG----LDLLQKMLRYDPAKRISAKAALTHPYF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  120 bits (304), Expect = 1e-31
 Identities = 79/331 (23%), Positives = 137/331 (41%), Gaps = 84/331 (25%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHDIGGT 153
           +IL K+G+G FG+V +       + VAIK+++    + +E  + EI +L++    +I   
Sbjct: 3   EILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNI--- 59

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             V+    +  ++ + IV E   G SL D L K++ ++     +  + ++LL+ + ++H 
Sbjct: 60  --VKYYGSYLKKDELWIVMEFCSGGSLKDLL-KSTNQTLTESQIAYVCKELLKGLEYLHS 116

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE 271
             +IH D+K  NILL                 + DG           +KLIDFG S    
Sbjct: 117 NGIIHRDIKAANILL-----------------TSDGE----------VKLIDFGLSAQLS 149

Query: 272 H-QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
             +  + +V T ++ APEVI G  ++Y  D+WS+G   +EL  G+  +   E     A+ 
Sbjct: 150 DTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPY--SELPPMKALF 207

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
           +      P                    L  P                       +  D 
Sbjct: 208 KIATNGPP-------------------GLRNP----------------------EKWSDE 226

Query: 391 SAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
                 D L+  L+ +P +R  A + L+HPF
Sbjct: 227 ----FKDFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score =  121 bits (304), Expect = 2e-31
 Identities = 92/338 (27%), Positives = 152/338 (44%), Gaps = 70/338 (20%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDIGGTR 154
           L K+GEGT+  V +  +    E+VA+K +   +       A+ EI +++ L   +I    
Sbjct: 5   LEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI---- 60

Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYR-SFPIDLVRELGRQLLESVAFMHEL 213
            V++ +     N + +VFE +   L  ++  +  R +   + V+    QLL+ +AF HE 
Sbjct: 61  -VRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN 119

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG------- 266
           R++H DLKP+N+L+                 +K G           +KL DFG       
Sbjct: 120 RVLHRDLKPQNLLI-----------------NKRGE----------LKLADFGLARAFGI 152

Query: 267 -STTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
              TF ++     V T  YRAP+V+LG   ++   D+WSVGCI+ E+ +G  LF    N 
Sbjct: 153 PVNTFSNE-----VVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE 207

Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
           + L  + R++G  P         +  +Y     +  +P                  P  +
Sbjct: 208 DQLLKIFRIMGT-PTESTWPGISQLPEY-----KPTFP---------------RYPPQDL 246

Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
            Q   H+    IDLL  LL+ +P  R+ A +AL+HP+F
Sbjct: 247 QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score =  120 bits (304), Expect = 3e-31
 Identities = 98/343 (28%), Positives = 150/343 (43%), Gaps = 80/343 (23%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARHDIGG 152
           + K+GEGT+G V +  D    E+VA+K +R +    E     A+ EI +L+ L  H    
Sbjct: 4   VEKIGEGTYGVVYKARDKLTGEIVALKKIR-LETEDEGVPSTAIREISLLKEL-NHP--- 58

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              V++ +     N + +VFE L   L  ++  +        L++    QLL+ +A+ H 
Sbjct: 59  -NIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHS 117

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---- 268
            R++H DLKP+N+L                           + +  A+KL DFG      
Sbjct: 118 HRVLHRDLKPQNLL---------------------------IDREGALKLADFGLARAFG 150

Query: 269 ----TFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHE 322
               T+ H+     V T  YRAPE++LG    Y  P D+WS+GCI  E+ +   LF    
Sbjct: 151 VPVRTYTHE-----VVTLWYRAPEILLG-SRQYSTPVDIWSIGCIFAEMVNRRPLFPGDS 204

Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV---WKLLR 379
            ++ L  + R LG  P   V                  WP G TS    +     W    
Sbjct: 205 EIDQLFRIFRTLGT-PDEDV------------------WP-GVTSLPDYKPTFPKWARQD 244

Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           L  ++    D      +DLL  +L YDPA+R+ A+ AL+HP+F
Sbjct: 245 LSKVVPNL-DEDG---LDLLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score =  119 bits (301), Expect = 8e-31
 Identities = 94/345 (27%), Positives = 152/345 (44%), Gaps = 76/345 (22%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARHDI 150
           + L+++ EGT+G V    D +  E+VA+K ++ + K +E     ++ EI++L +L +H  
Sbjct: 8   EKLNRIEEGTYGVVYRARDKKTGEIVALKKLK-MEKEKEGFPITSLREINILLKL-QHP- 64

Query: 151 GGTRCVQIRNWF--DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                V ++        + I +V E +   L   + +   + F    V+ L  QLL  VA
Sbjct: 65  ---NIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLM-ETMKQPFLQSEVKCLMLQLLSGVA 120

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-S 267
            +H+  ++H DLK  N+L                           L     +K+ DFG +
Sbjct: 121 HLHDNWILHRDLKTSNLL---------------------------LNNRGILKICDFGLA 153

Query: 268 TTFEHQDHSY--VVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENL 324
             +      Y  +V T  YRAPE++LG   ++   D+WSVGCI  EL + + LF     +
Sbjct: 154 REYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI 213

Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD-----GATSRDSMRAVWKLLR 379
           + L  + ++LG  P           EK         WP      GA  +   +  +  LR
Sbjct: 214 DQLNKIFKLLG-TP----------TEK--------IWPGFSELPGAKKKTFTKYPYNQLR 254

Query: 380 --LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
              P L +           DLL  LL YDPA+R+ A +AL+HP+F
Sbjct: 255 KKFPALSLSDNGF------DLLNRLLTYDPAKRISAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score =  119 bits (302), Expect = 2e-30
 Identities = 104/359 (28%), Positives = 164/359 (45%), Gaps = 79/359 (22%)

Query: 86  IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV-----------RSINKYREA 134
           I +++  + +IL K+G+G +G V +  D   KE+VA+K +           R+   +RE 
Sbjct: 1   IDKHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRT---FRE- 56

Query: 135 AMIEIDVLQRLARHD-IGGTRCVQIRNWFDYRNH--ICIVFEKLGPSLYDFLRKNSYRSF 191
               I  LQ L  H  I     V++ N     N   I +VFE +   L+  +R N     
Sbjct: 57  ----IMFLQELGDHPNI-----VKLLNVIKAENDKDIYLVFEYMETDLHAVIRAN----- 102

Query: 192 PIDLVRELGR-----QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246
              ++ ++ +     QLL+++ ++H   +IH DLKP NILL S   VK+ D+  L+RS  
Sbjct: 103 ---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFG-LARS-- 156

Query: 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW-NYPCDLWSVG 305
                           +       E+   +  V+TR YRAPE++LG        D+WSVG
Sbjct: 157 ----------------LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVG 200

Query: 306 CILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA 365
           CIL E+  G+ LF     L  L  +  V+GP         D  +         +  P  A
Sbjct: 201 CILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPS-----AEDIES---------IKSPFAA 246

Query: 366 TSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
           T  DS+       R    + + +  ++ D +DLL+ LL ++P +RL A EAL HP+  +
Sbjct: 247 TMLDSL-----PSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score =  118 bits (298), Expect = 2e-30
 Identities = 100/339 (29%), Positives = 158/339 (46%), Gaps = 71/339 (20%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIK--IVRSINKY-REAAMIEIDVLQRLARHDIGGT 153
           L  +GEG++G V++C   E  ++VAIK  +    +K  ++ AM EI +L++L RH+    
Sbjct: 6   LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL-RHE---- 60

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V +   F  +  + +VFE +  ++ D L K          VR+   Q+L  + F H  
Sbjct: 61  NLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSH 119

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 272
            +IH D+KPENIL VS                          +S  +KL DFG + T   
Sbjct: 120 NIIHRDIKPENIL-VS--------------------------QSGVVKLCDFGFARTLAA 152

Query: 273 QDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
               Y   V+TR YRAPE+++G   +    D+W+VGC++ E+ +GE LF    +++ L  
Sbjct: 153 PGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYH 212

Query: 330 MERVLGPL-PHHMVIRADRRAEKYFRR-----GARLDWPDGATSRDSMRAVWKLLRLPNL 383
           + + LG L P H  I         F++     G RL  P+     + +       R P L
Sbjct: 213 IIKCLGNLIPRHQEI---------FQKNPLFAGMRL--PE-VKEIEPLEK-----RFPKL 255

Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                   +G ++DL +  LR DP +R  + + L H FF
Sbjct: 256 --------SGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score =  118 bits (297), Expect = 2e-30
 Identities = 95/339 (28%), Positives = 156/339 (46%), Gaps = 71/339 (20%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---EAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  + +  ++VA+K +R  ++       A+ EI +L+ L   +I   
Sbjct: 5   IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNI--- 61

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSL---YDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
             V +++     + + ++FE L   L    D L K  Y     +LV+    Q+L+ + F 
Sbjct: 62  --VCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQY--MDAELVKSYLYQILQGILFC 117

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---S 267
           H  R++H DLKP+N+L+                                IKL DFG   +
Sbjct: 118 HSRRVLHRDLKPQNLLI---------------------------DNKGVIKLADFGLARA 150

Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
                + +++ V T  YRAPEV+LG   ++ P D+WS+G I  E+ + + LF     ++ 
Sbjct: 151 FGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ 210

Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV---WKLLRLPNL 383
           L  + R+LG  P   V                  WP G TS    +     WK       
Sbjct: 211 LFRIFRILGT-PTEDV------------------WP-GVTSLPDYKNTFPKWK----KGS 246

Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           +   V +   D +DLL+ +L YDPA+R+ A++AL HP+F
Sbjct: 247 LRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score =  117 bits (294), Expect = 1e-29
 Identities = 93/335 (27%), Positives = 139/335 (41%), Gaps = 62/335 (18%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQRLARHDIGG 152
           L+++GEGT+G V    D    E+VA+K VR ++  R+   I    EI +L  L   +I  
Sbjct: 12  LNRIGEGTYGIVYRARDTTSGEIVALKKVR-MDNERDGIPISSLREITLLLNLRHPNIVE 70

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            + V +    D    I +V E     L   L  N    F    V+ L  QLL  + ++HE
Sbjct: 71  LKEVVVGKHLD---SIFLVMEYCEQDLASLL-DNMPTPFSESQVKCLMLQLLRGLQYLHE 126

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE 271
             +IH DLK  N+LL                                +K+ DFG + T+ 
Sbjct: 127 NFIIHRDLKVSNLLLTD---------------------------KGCLKIADFGLARTYG 159

Query: 272 HQDHSY--VVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
                    V T  YRAPE++LG   +    D+W+VGCIL EL + + L      +E L 
Sbjct: 160 LPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLD 219

Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP-NLIMQH 387
           ++ ++LG  P+  +                  WP    S   +   + L + P N +   
Sbjct: 220 LIIQLLGT-PNESI------------------WPG--FSDLPLVGKFTLPKQPYNNLKHK 258

Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
               +   + LL  LL YDP +R  A EAL   +F
Sbjct: 259 FPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF 293

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  112 bits (284), Expect = 1e-28
 Identities = 81/334 (24%), Positives = 135/334 (40%), Gaps = 97/334 (29%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMI--EIDVLQRLARHDIGGTRCV 156
           G+G+FG+V+     +  +L A+K+++   I K +E      E ++L R+  H       V
Sbjct: 2   GKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-NHPF----IV 56

Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F     + +V E   G  L+  L K     F  +  R    +++ ++ ++H L +
Sbjct: 57  KLHYAFQTEEKLYLVLEYAPGGELFSHLSK--EGRFSEERARFYAAEIVLALEYLHSLGI 114

Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS----TTFE 271
           I+ DLKPENILL                   DG           IKL DFG     ++  
Sbjct: 115 IYRDLKPENILL-----------------DADGH----------IKLTDFGLAKELSSEG 147

Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
            + +++   T  Y APEV+LG G+    D WS+G +L E+ +G+  F   +  E   + E
Sbjct: 148 SRTNTF-CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE---IYE 203

Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
           ++L                        L +P+  +                         
Sbjct: 204 KIL---------------------KDPLRFPEFLSP------------------------ 218

Query: 392 AGDLIDLLQGLLRYDPAERLKAREA---LRHPFF 422
             +  DL+ GLL+ DP +RL +  A     HPFF
Sbjct: 219 --EARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score =  114 bits (286), Expect = 2e-28
 Identities = 89/362 (24%), Positives = 153/362 (42%), Gaps = 64/362 (17%)

Query: 85  AIGENLTPRCKILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI------ 137
            +  +++ R       +GEGT+G+V + +D    ++VAIK V+ I +             
Sbjct: 1   NMSFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVK-IIEISNDVTKDRQLVG 59

Query: 138 ----------EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK-- 185
                     E+ ++  +   +I G   V +   F     I +V + +     D L+K  
Sbjct: 60  MCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDF-----INLVMDIMA---SD-LKKVV 110

Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
           +         V+ +  Q+L  +  +H+   +H DL P NI + S    K+ D+  L+R  
Sbjct: 111 DRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG-LARRY 169

Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSV 304
               Y   L K   ++           ++ +  V T  YRAPE+++G   +++  D+WSV
Sbjct: 170 GYPPYSDTLSKDETMQR---------REEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSV 220

Query: 305 GCILVELCSGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPD 363
           GCI  EL +G+ LF     ++ L  +  +LG P                       +WP 
Sbjct: 221 GCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNED--------------------NWPQ 260

Query: 364 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
            A             R P  +     +++ D IDLLQ LL+ +P ER+ A+EAL+H +F 
Sbjct: 261 -AKKLPLYTEFTP--RKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFK 317

Query: 424 RD 425
            D
Sbjct: 318 SD 319

Length = 335

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  110 bits (277), Expect = 1e-27
 Identities = 79/331 (23%), Positives = 131/331 (39%), Gaps = 83/331 (25%)

Query: 103 GTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARHDIGGTRCVQI 158
           G +G+V         ++ AIK+++  +  R+      + E D+L +     +     V++
Sbjct: 4   GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYV-----VKL 58

Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
              F  + ++ +V E L G  L   L   +  S   D+ R    +++ ++ ++H   +IH
Sbjct: 59  YYSFQGKKNLYLVMEYLPGGDLASLLE--NVGSLDEDVARIYIAEIVLALEYLHSNGIIH 116

Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DLKP+NIL+ S  ++K+ D+      SK G   + +  +   K            +   
Sbjct: 117 RDLKPDNILIDSNGHLKLTDFGL----SKVGLVRRQINLNDDEK------------EDKR 160

Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
           +V T  Y APEVILG G +   D WS+GCIL E   G   F                   
Sbjct: 161 IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFH------------------ 202

Query: 338 PHHMVIRADRRAEKYFR--RGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL 395
                       E+ F+     +++WP+     D                        + 
Sbjct: 203 --------GETPEEIFQNILNGKIEWPEDVEVSD------------------------EA 230

Query: 396 IDLLQGLLRYDPAERLKAR---EALRHPFFT 423
           IDL+  LL  DP +RL A+   E   HPFF 
Sbjct: 231 IDLISKLLVPDPEKRLGAKSIEEIKNHPFFK 261

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  110 bits (278), Expect = 1e-27
 Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 21/232 (9%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYR--EAAMIEIDVLQRLARHDI 150
           K    +GEG+F  VV   + E  +  AIKI+  R + K +  +   IE +VL RL  H  
Sbjct: 4   KFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGH-- 61

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                +++   F    ++  V E      L  ++RK  Y S      R    ++L ++ +
Sbjct: 62  --PGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEY 117

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           +H   +IH DLKPENILL    ++K+ D+   K L  +S   S   N   ++ I      
Sbjct: 118 LHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES---NKGDATNIDSQIEK 174

Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
           +        +  V T  Y +PE++         DLW++GCI+ ++ +G+  F
Sbjct: 175 NRRR----FASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPF 222

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score =  109 bits (275), Expect = 6e-27
 Identities = 84/347 (24%), Positives = 144/347 (41%), Gaps = 62/347 (17%)

Query: 90  LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREA--AMIEIDVLQRLA 146
           +  R K +  +G G +G V    D    + VAIK I  + +    A   + E+ +L+   
Sbjct: 3   VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFK 62

Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             +I   R +      D++  + +V + +   L+  +  +  +    + +R    QLL  
Sbjct: 63  HDNIIAIRDILRPPGADFK-DVYVVMDLMESDLHHIIHSD--QPLTEEHIRYFLYQLLRG 119

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLI 263
           + ++H   +IH DLKP N+L+     +++ D+   + LS S  +  YF            
Sbjct: 120 LKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMT---------- 169

Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHE 322
                  E+      V+TR YRAPE++L L  +    D+WSVGCI  E+     LF    
Sbjct: 170 -------EY------VATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKN 216

Query: 323 NLEHLAMMERVLGPLPHHMV--IRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKL 377
            +  L ++  VLG     ++  I +D R  KY     R   + W                
Sbjct: 217 YVHQLKLILSVLGSPSEEVLNRIGSD-RVRKYIQNLPRKQPVPWSKIFPKASP------- 268

Query: 378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
                           + +DLL  +L++DP ER+   +AL+HPF  +
Sbjct: 269 ----------------EALDLLSQMLQFDPEERITVEQALQHPFLAQ 299

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score =  109 bits (275), Expect = 7e-27
 Identities = 93/339 (27%), Positives = 147/339 (43%), Gaps = 50/339 (14%)

Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRL 145
            ++ PR + LS +GEG +G V           VAIK +       + +  + EI +L+R 
Sbjct: 1   FDVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRF 60

Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
              +I G   +     F+  N + IV E +   LY  ++     +   D ++    Q+L 
Sbjct: 61  KHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQHLSN---DHIQYFLYQILR 117

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
            + ++H   ++H DLKP N+LL +   +K+ D+  L+R               A    D 
Sbjct: 118 GLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFG-LAR--------------IADPEHDH 162

Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENL 324
                E+      V+TR YRAPE++L   G+    D+WSVGCIL E+ S   LF   + L
Sbjct: 163 TGFLTEY------VATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL 216

Query: 325 EHLAMMERVLGPLPHHMVIRA--DRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
             L ++  VLG  P    +      RA  Y +    L +             W  L  P 
Sbjct: 217 HQLNLILGVLGT-PSQEDLNCIISLRARNYIK---SLPFKPKVP--------WNKL-FP- 262

Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
               + D  A   +DLL  +L ++P +R+   EAL HP+
Sbjct: 263 ----NADPKA---LDLLDKMLTFNPHKRITVEEALAHPY 294

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  107 bits (271), Expect = 7e-27
 Identities = 80/337 (23%), Positives = 142/337 (42%), Gaps = 90/337 (26%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIG 151
           +I+ ++G+G+FG+V         +L  +K +   N   K RE A+ E+ +L++L  H   
Sbjct: 3   EIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL-NHP-- 59

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFL--RKNSYRSFPIDLVRELGRQLLESVA 208
               ++    F+ +  +CIV E   G  L   +  +K   + FP + + +   QL  ++ 
Sbjct: 60  --NIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALK 117

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-S 267
           ++H  +++H D+KP+NI L                 + +G           +KL DFG S
Sbjct: 118 YLHSRKILHRDIKPQNIFL-----------------TSNGL----------VKLGDFGIS 150

Query: 268 TTFEH-QDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
                  D +  VV T +Y +PE+     +NY  D+WS+GC+L ELC+ +  F+  ENL 
Sbjct: 151 KVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFE-GENLL 209

Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
            LA+            +++                                   +P+   
Sbjct: 210 ELAL-----------KILKGQYPP------------------------------IPS--- 225

Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                 + +L +L+  LL+ DP ER    + L+ PF 
Sbjct: 226 ----QYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score =  109 bits (275), Expect = 8e-27
 Identities = 99/347 (28%), Positives = 160/347 (46%), Gaps = 71/347 (20%)

Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-REAAMI--EIDVLQRLARH- 148
           R KI   +G+G++G V    D    E VAIK +  + ++  +A  I  EI +L RL RH 
Sbjct: 1   RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLL-RLLRHP 59

Query: 149 DIGGTRCVQIRNWF------DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGR- 201
           DI     V+I++        ++++ I +VFE +   L+  ++ N       DL  E  + 
Sbjct: 60  DI-----VEIKHIMLPPSRREFKD-IYVVFELMESDLHQVIKAND------DLTPEHHQF 107

Query: 202 ---QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              QLL ++ ++H   + H DLKP+NIL  +   +K+ D+  L+R +     F + P  +
Sbjct: 108 FLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFG-LARVA-----FNDTP--T 159

Query: 259 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEA 316
           AI   D+             V+TR YRAPE+       Y    D+WS+GCI  E+ +G+ 
Sbjct: 160 AIFWTDY-------------VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKP 206

Query: 317 LFQTHENLEHLAMMERVLGPLPHHMVIRA-DRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
           LF     +  L ++  +LG      + R  + +A +Y                 SMR   
Sbjct: 207 LFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYL---------------SSMRK-- 249

Query: 376 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
              + P    Q   ++    + LL+ LL +DP +R  A EAL  P+F
Sbjct: 250 ---KQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYF 293

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score =  108 bits (272), Expect = 1e-26
 Identities = 86/352 (24%), Positives = 145/352 (41%), Gaps = 75/352 (21%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARHDI 150
           +IL K+GEGTFG+V +    +   +VA+K +  ++  ++     A+ EI +L++L   ++
Sbjct: 11  EILGKLGEGTFGEVYKARQIKTGRVVALKKI-LMHNEKDGFPITALREIKILKKLKHPNV 69

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI---DLVRELG------- 200
                V +         I +  E+  P      R + Y   P    DL   L        
Sbjct: 70  -----VPL---------IDMAVER--PDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLT 113

Query: 201 --------RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
                    QLLE + ++HE  ++H D+K  NIL+ +   +K+ D+  L+R         
Sbjct: 114 ESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFG-LARPYDGPPP-- 170

Query: 253 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVE 310
           N            G T      ++ +V TR YR PE++LG    Y    D+W +GC+  E
Sbjct: 171 NPKGGGG------GGTR----KYTNLVVTRWYRPPELLLGER-RYTTAVDIWGIGCVFAE 219

Query: 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 370
           + +   + Q   +++ L ++ ++ G                         WP G  S   
Sbjct: 220 MFTRRPILQGKSDIDQLHLIFKLCGTPTEE-------------------TWP-GWRSLPG 259

Query: 371 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
              V      P  + +       + +DLL  LL  DP +RL A +AL HP+F
Sbjct: 260 CEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score =  107 bits (269), Expect = 2e-26
 Identities = 90/335 (26%), Positives = 138/335 (41%), Gaps = 60/335 (17%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMIEIDVLQRLARHDIGGT 153
           ++++G G +G V +  D      VA+K VR          + + E+ +L+RL   D    
Sbjct: 5   VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNI 64

Query: 154 R-----CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                 C   R   D    + +VFE +   L  +L K      P + +++L RQ L  + 
Sbjct: 65  VRLMDVCATSRT--DRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLD 122

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           F+H   ++H DLKPENIL+ S   VK+ D+      ++  S                   
Sbjct: 123 FLHANCIVHRDLKPENILVTSGGQVKLADFGL----ARIYSC------------------ 160

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
                  + VV T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +   + L 
Sbjct: 161 ---QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG 217

Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLPNLIMQH 387
            +  ++G LP                     DWP D    R +        R P  +   
Sbjct: 218 KIFDLIG-LP------------------PEDDWPRDVTLPRGAFSP-----RGPRPVQSV 253

Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           V         LL  +L ++P +R+ A  AL+HPFF
Sbjct: 254 VPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score =  106 bits (267), Expect = 6e-26
 Identities = 95/355 (26%), Positives = 154/355 (43%), Gaps = 90/355 (25%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARHD--- 149
           L+K+G+GTFG+V +    + K++VA+K V   N+ +E     A+ EI +LQ L +H+   
Sbjct: 17  LAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLL-KHENVV 74

Query: 150 ----IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
               I  T+         Y+    +VFE     L   L  N    F +  ++++ + LL 
Sbjct: 75  NLIEICRTKATPYNR---YKGSFYLVFEFCEHDLAGLL-SNKNVKFTLSEIKKVMKMLLN 130

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
            + ++H  +++H D+K  NIL+                 +KDG           +KL DF
Sbjct: 131 GLYYIHRNKILHRDMKAANILI-----------------TKDG----------ILKLADF 163

Query: 266 G-----STTFEHQDHSYV--VSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEA 316
           G     S +   + + Y   V T  YR PE++LG   +Y  P D+W  GCI+ E+ +   
Sbjct: 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLG-ERDYGPPIDMWGAGCIMAEMWTRSP 222

Query: 317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376
           + Q +     L ++ ++ G +   +                   WP G    +    ++K
Sbjct: 223 IMQGNTEQHQLTLISQLCGSITPEV-------------------WP-GVDKLE----LFK 258

Query: 377 LLRLPNLIMQHV---------DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
            + LP    + V         D  A DLID    LL  DPA+R+ A  AL H FF
Sbjct: 259 KMELPQGQKRKVKERLKPYVKDPHALDLIDK---LLVLDPAKRIDADTALNHDFF 310

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score =  106 bits (266), Expect = 6e-26
 Identities = 95/353 (26%), Positives = 151/353 (42%), Gaps = 89/353 (25%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARHDIG 151
           I+ ++GEGT+GQV +  D +  ELVA+K VR  N+ +E     A+ EI +L++L   +I 
Sbjct: 11  IIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNI- 68

Query: 152 GTRCVQI----RNWFDYRNH---ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
                +I    ++  D++       +VFE +   L   L ++    F  D ++   +QLL
Sbjct: 69  -VNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLL-ESGLVHFSEDHIKSFMKQLL 126

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
           E + + H+   +H D+K  NILL                                IKL D
Sbjct: 127 EGLNYCHKKNFLHRDIKCSNILL---------------------------NNKGQIKLAD 159

Query: 265 FGSTTFEHQDHS--YV--VSTRHYRAPEVILGLGWNYPC-DLWSVGCILVELCSGEALFQ 319
           FG     + + S  Y   V T  YR PE++LG     P  D+WS GCIL EL + + +FQ
Sbjct: 160 FGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQ 219

Query: 320 THENLEHLAMMERVLGP-----------LPHHMVIRADRRAEKYFRRGARLDWPDGATSR 368
            ++ L  L ++ R+ G            LP+   +    + +K +RR  R ++       
Sbjct: 220 ANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTM----KPKKQYRRRLREEF------- 268

Query: 369 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
                                      +DLL  +L  DP++R  A EAL  P+
Sbjct: 269 --------------------SFIPTPALDLLDHMLTLDPSKRCTAEEALNSPW 301

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score =  105 bits (263), Expect = 1e-25
 Identities = 92/346 (26%), Positives = 158/346 (45%), Gaps = 76/346 (21%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARHDIGG 152
           + K+GEGT+G V +  D    E +A+K +R + +  E     A+ EI +L+ +   +I  
Sbjct: 7   VEKIGEGTYGVVYKARDRVTNETIALKKIR-LEQEDEGVPSTAIREISLLKEMQHGNI-- 63

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              V++++       + +VFE L   L   +  +   +    L++    Q+L  +A+ H 
Sbjct: 64  ---VRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS 120

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---- 268
            R++H DLKP+N+L              + R             ++A+KL DFG      
Sbjct: 121 HRVLHRDLKPQNLL--------------IDRR------------TNALKLADFGLARAFG 154

Query: 269 ----TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
               TF H+     V T  YRAPE++LG   ++ P D+WSVGCI  E+ + + LF     
Sbjct: 155 IPVRTFTHE-----VVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSE 209

Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
           ++ L  + R+LG                         WP G TS    ++ +      +L
Sbjct: 210 IDELFKIFRILGTPNEET-------------------WP-GVTSLPDYKSAFPKWPPKDL 249

Query: 384 --IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR 427
             ++  ++ +    +DLL  +LR DP++R+ AR AL H +F +D+ 
Sbjct: 250 ATVVPTLEPAG---VDLLSKMLRLDPSKRITARAALEHEYF-KDLG 291

Length = 294

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score =  104 bits (262), Expect = 2e-25
 Identities = 94/344 (27%), Positives = 148/344 (43%), Gaps = 82/344 (23%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARHDIGG 152
           L K+GEGT+G V +  + E  E+VA+K VR ++   E    +A+ EI +L+ L   +I  
Sbjct: 5   LEKIGEGTYGTVFKAKNRETHEIVALKRVR-LDDDDEGVPSSALREICLLKELKHKNI-- 61

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK-NSYRSFPIDLVRELGRQLLESVAFMH 211
              V++ +       + +VFE     L  +    N      I  V+    QLL+ +AF H
Sbjct: 62  ---VRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEI--VKSFMFQLLKGLAFCH 116

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---ST 268
              ++H DLKP+N+L+                 +K+G           +KL DFG   + 
Sbjct: 117 SHNVLHRDLKPQNLLI-----------------NKNGE----------LKLADFGLARAF 149

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEH 326
               + +S  V T  YR P+V+ G   ++   D+WS GCI  EL  +G  LF  ++  + 
Sbjct: 150 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 209

Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
           L  + R+L                             G  + +S   V KL       M 
Sbjct: 210 LKRIFRLL-----------------------------GTPTEESWPGVSKLPDYKPYPMY 240

Query: 387 HVDHSAGDLI--------DLLQGLLRYDPAERLKAREALRHPFF 422
               S  +++        DLLQ LL  +P +R+ A EAL+HP+F
Sbjct: 241 PATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score =  103 bits (259), Expect = 4e-25
 Identities = 91/331 (27%), Positives = 148/331 (44%), Gaps = 57/331 (17%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLARHDIGG 152
           L K+GEGT+  V +      + LVA+K +R   ++ E A    + E+ +L+ L   +I  
Sbjct: 10  LDKLGEGTYATVFKGRSKLTENLVALKEIRL--EHEEGAPCTAIREVSLLKNLKHANI-- 65

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              V + +       + +VFE L   L  +L  N      +  V+    QLL  +++ H+
Sbjct: 66  ---VTLHDIIHTERCLTLVFEYLDSDLKQYL-DNCGNLMSMHNVKIFMFQLLRGLSYCHK 121

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            +++H DLKP+N+L+     +K+ D+  L+R+       K++P  +              
Sbjct: 122 RKILHRDLKPQNLLINEKGELKLADFG-LARA-------KSVPTKT-------------- 159

Query: 273 QDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
             +S  V T  YR P+V+LG   ++ P D+W VGCIL E+ +G  +F      E L ++ 
Sbjct: 160 --YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIF 217

Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
           R+LG                         WP G TS +  R+          ++ H    
Sbjct: 218 RLLGTPTEE-------------------TWP-GITSNEEFRSYLFPQYRAQPLINHAPRL 257

Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             D IDLL  LL Y+   R+ A  ALRH +F
Sbjct: 258 DTDGIDLLSSLLLYETKSRISAEAALRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  101 bits (255), Expect = 1e-24
 Identities = 69/224 (30%), Positives = 102/224 (45%), Gaps = 43/224 (19%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA---AMIEIDVLQRLARHDIGGTRC 155
            +G G FG V +  + E  + VAIK +       EA    M EID+L+ L   +I     
Sbjct: 7   LIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNI----- 61

Query: 156 VQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V+     +  + + I+ E     SL   ++K  +  FP  LV     Q+L+ +A++HE  
Sbjct: 62  VKYIGSIETSDSLYIILEYAENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQG 119

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT----F 270
           +IH D+K  NIL                  +KDG           +KL DFG  T     
Sbjct: 120 VIHRDIKAANILT-----------------TKDGV----------VKLADFGVATKLNDV 152

Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
              D S VV T ++ APEVI   G +   D+WS+GC ++EL +G
Sbjct: 153 SKDDAS-VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTG 195

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  101 bits (254), Expect = 2e-24
 Identities = 79/337 (23%), Positives = 137/337 (40%), Gaps = 94/337 (27%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L K+GEG  G+V +  D    + VAIK +R   + +E  + EI +++     +I     V
Sbjct: 24  LEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNI-----V 78

Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRE----LGRQLLESVAFMH 211
              + +   + + +V E + G SL D + +N      + +       + R++L+ + ++H
Sbjct: 79  DYYDSYLVGDELWVVMEYMDGGSLTDIITQN-----FVRMNEPQIAYVCREVLQGLEYLH 133

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---ST 268
              +IH D+K +NILL                 SKDGS          +KL DFG     
Sbjct: 134 SQNVIHRDIKSDNILL-----------------SKDGS----------VKLADFGFAAQL 166

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
           T E    + VV T ++ APEVI    +    D+WS+G + +E+  GE             
Sbjct: 167 TKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGE------------- 213

Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS-MRAVWKLLRLPNLIMQH 387
                    P ++                          R+  +RA++ +       +++
Sbjct: 214 ---------PPYL--------------------------REPPLRALFLITTKGIPPLKN 238

Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +  + +  D L   L  DP +R  A E L+HPF  +
Sbjct: 239 PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 99.7 bits (249), Expect = 7e-24
 Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 54/253 (21%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQRLARHDIGGTR 154
           K+G GTFG+V    + +  EL+A+K +R I       +     E+ VL+ L   ++    
Sbjct: 7   KIGGGTFGKVYTAVNLDTGELMAVKEIR-IQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65

Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V++     +R  + I  E   G +L + L     R     ++R    QLLE +A++H  
Sbjct: 66  GVEV-----HREKVYIFMEYCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSH 118

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS------ 267
            ++H D+KP NI L                             +  IKL DFG       
Sbjct: 119 GIVHRDIKPANIFLD---------------------------HNGVIKLGDFGCAVKLKN 151

Query: 268 -TTFEHQDHSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSG----EALFQ 319
            TT   ++   +  T  Y APEVI G    G     D+WS+GC+++E+ +G      L  
Sbjct: 152 NTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN 211

Query: 320 THENLEHLAMMER 332
             + + H+    +
Sbjct: 212 EFQIMFHVGAGHK 224

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score =  100 bits (249), Expect = 2e-23
 Identities = 88/348 (25%), Positives = 155/348 (44%), Gaps = 76/348 (21%)

Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + L+ +G G +G V   +D   ++ VA+K        ++ +   YRE     + +L+ 
Sbjct: 16  RYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRE-----LRLLKH 70

Query: 145 LARHDIGG-----TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
           +   ++ G     T    I N+    N + +V   +G  L + ++    +    + V+ L
Sbjct: 71  MKHENVIGLLDVFTPATSIENF----NEVYLVTNLMGADLNNIVK---CQKLSDEHVQFL 123

Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
             QLL  + ++H   +IH DLKP N+ +                            +   
Sbjct: 124 IYQLLRGLKYIHSAGIIHRDLKPSNVAV---------------------------NEDCE 156

Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF 318
           ++++DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL  G+ALF
Sbjct: 157 LRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALF 216

Query: 319 QTHENLEHLA-MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
             ++ ++ L  +ME V  P P  +   +   A KY +                      L
Sbjct: 217 PGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQ---------------------SL 255

Query: 378 LRLPNLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
             +P   ++ +   A  L IDLL+ +L  D  +R+ A EAL HP+F++
Sbjct: 256 PHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ 303

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 99.6 bits (248), Expect = 3e-23
 Identities = 88/337 (26%), Positives = 141/337 (41%), Gaps = 67/337 (19%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHDIGGT 153
           L ++G G +G V    D    E VAIK + R      + + A  E+ +L+ +   ++ G 
Sbjct: 20  LKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGL 79

Query: 154 RCVQI-----RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
             V         + D        F  + P +   L+K        D V+ L  Q+L  + 
Sbjct: 80  LDVFTSAVSGDEFQD--------FYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLK 131

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++H   +IH DLKP N+ +                            +   +K++DFG  
Sbjct: 132 YIHSAGIIHRDLKPGNLAV---------------------------NEDCELKILDFGLA 164

Query: 269 TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                + +  V TR YRAPEVIL  + +N   D+WSVGCI+ E+ +G+ LF+  + L+ L
Sbjct: 165 RHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL 224

Query: 328 AMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
             + +V G P P  +    D+ A+ Y +                      L + P     
Sbjct: 225 TQILKVTGVPGPEFVQKLEDKAAKSYIK---------------------SLPKYPRKDFS 263

Query: 387 HVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFF 422
            +   A    +DLL+ +L  D  +RL A EAL HP+F
Sbjct: 264 TLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYF 300

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 98.9 bits (247), Expect = 3e-23
 Identities = 90/380 (23%), Positives = 142/380 (37%), Gaps = 118/380 (31%)

Query: 95  KILSKMGEGTFGQVVECF--DNEKKELVAIKIVRSINK---------YREAAMI-EID-- 140
           +I   +G GT+G+V +    + +  +  AIK  +   +          RE A++ E+   
Sbjct: 3   EIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHE 62

Query: 141 ---VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFL------RKNSYRSF 191
               L  +        + V +   FDY  H             D        R+    S 
Sbjct: 63  NVVSLVEVFLEH--ADKSVYLL--FDYAEH-------------DLWQIIKFHRQAKRVSI 105

Query: 192 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251
           P  +V+ L  Q+L  V ++H   ++H DLKP NIL++                  +G   
Sbjct: 106 PPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMG-----------------EG--- 145

Query: 252 KNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSV 304
              P+   +K+ D G     +       D   VV T  YRAPE++LG   +    D+W++
Sbjct: 146 ---PERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAI 202

Query: 305 GCILVELCSGEALFQTHE------NLEHLAMMER---VLGP-----------LPHHMVIR 344
           GCI  EL + E +F+  E      N      +ER   VLG            +P +  + 
Sbjct: 203 GCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLM 262

Query: 345 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI--MQHVDHSAGDLIDLLQGL 402
            D + + Y                             +L   M+          DLL+ L
Sbjct: 263 KDFKTKTY--------------------------PSNSLAKWMEKHKKPDSQGFDLLRKL 296

Query: 403 LRYDPAERLKAREALRHPFF 422
           L YDP +R+ A EAL HP+F
Sbjct: 297 LEYDPTKRITAEEALEHPYF 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 98.7 bits (246), Expect = 6e-23
 Identities = 86/354 (24%), Positives = 153/354 (43%), Gaps = 68/354 (19%)

Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLAR 147
           +L  R   L  +G G+ G V    D++  + VA+K IV +  +  + A+ EI +++RL  
Sbjct: 2   DLGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDH 61

Query: 148 HDI---------GGTRCVQ-IRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVR 197
            +I          G+   + + +  +  + + IV E +   L + L +        +  R
Sbjct: 62  DNIVKVYEVLGPSGSDLTEDVGSLTELNS-VYIVQEYMETDLANVLEQGP---LSEEHAR 117

Query: 198 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 257
               QLL  + ++H   ++H DLKP N+ + + + V                        
Sbjct: 118 LFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLV------------------------ 153

Query: 258 SAIKLIDFG-----STTFEHQDH-SYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVE 310
             +K+ DFG        + H+ + S  + T+ YR+P ++L    +    D+W+ GCI  E
Sbjct: 154 --LKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAE 211

Query: 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 370
           + +G+ LF     LE    M+ +L  +P   V+R + R E            DG   R  
Sbjct: 212 MLTGKPLFAGAHELE---QMQLILESVP---VVREEDRNE-LLNVIPSFVRNDGGEPRRP 264

Query: 371 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
           +R +     LP      V+  A   +D L+ +L ++P +RL A EAL HP+ + 
Sbjct: 265 LRDL-----LPG-----VNPEA---LDFLEQILTFNPMDRLTAEEALMHPYMSC 305

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 96.7 bits (241), Expect = 8e-23
 Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 46/256 (17%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSIN-KYREAAMIEIDVLQRLARHDIG 151
           K+L K+G+G++G V +       +  A+K V   S++ K RE A+ EI +L  +   +I 
Sbjct: 3   KVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNI- 61

Query: 152 GTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSY--RSFPIDLVRELGRQLLESV 207
               +  +  F   N +CIV E    G  L   + K     +  P   +  +  QLL  +
Sbjct: 62  ----ISYKEAFLDGNKLCIVMEYAPFG-DLSKAISKRKKKRKLIPEQEIWRIFIQLLRGL 116

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
             +HE +++H DLK  NILLV+ + VK+ D   +S+  K     KN+ K+          
Sbjct: 117 QALHEQKILHRDLKSANILLVANDLVKIGDLG-ISKVLK-----KNMAKT---------- 160

Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                      + T HY APEV  G  ++Y  D+WS+GC+L E+ +    F+   +++ L
Sbjct: 161 ----------QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEA-RSMQDL 209

Query: 328 AMMERVLG----PLPH 339
               +V      P+P 
Sbjct: 210 RY--KVQRGKYPPIPP 223

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 97.4 bits (243), Expect = 2e-22
 Identities = 85/339 (25%), Positives = 135/339 (39%), Gaps = 67/339 (19%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAA-MIEIDVLQRLARHDIG 151
           ++  +G G FG+V    D +  ++ A+K++R    I + + A    E D+L       I 
Sbjct: 5   VIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWI- 63

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               V++   F    H+ +V E + G  L + L +     FP +  R    +L+ ++  +
Sbjct: 64  ----VKLYYSFQDEEHLYLVMEYMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSV 117

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSR--SSKDGSYFKNLPKSSAIKLIDFGST 268
           H+L  IH D+KP+NIL+ +  ++K+ D+    +   +KD  Y+ N   +   +       
Sbjct: 118 HKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRR 177

Query: 269 TFEHQDHSY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
               Q        V T  Y APEV+ G  +   CD WS+G IL E+  G   F       
Sbjct: 178 RDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFY------ 231

Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL-LRLPNLI 384
                              +D   E Y +                +   WK  LR P   
Sbjct: 232 -------------------SDTLQETYNK---------------IIN--WKESLRFP--- 252

Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLK-AREALRHPFF 422
                 S  + IDL+  LL  DP +RL    E   HPFF
Sbjct: 253 -PDPPVSP-EAIDLICRLLC-DPEDRLGSFEEIKSHPFF 288

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 96.6 bits (240), Expect = 4e-22
 Identities = 81/344 (23%), Positives = 150/344 (43%), Gaps = 68/344 (19%)

Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE  ++      +
Sbjct: 18  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL------K 71

Query: 145 LARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
             +H+  IG           +  N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 72  HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 128

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+ +                            +   +K+
Sbjct: 129 ILRGLKYIHSADIIHRDLKPSNLAV---------------------------NEDCELKI 161

Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 162 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 221

Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G     ++ +    + + +                    +  L ++P
Sbjct: 222 DHIDQLKLILRLVGTPGAELLKKISSESARNY--------------------IQSLTQMP 261

Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 262 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 305

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 97.8 bits (243), Expect = 4e-22
 Identities = 94/353 (26%), Positives = 157/353 (44%), Gaps = 75/353 (21%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR------H 148
           K+ + +G G+FG V E    +  E VAIK V    +Y+     E+ +++ L         
Sbjct: 69  KLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNR---ELLIMKNLNHINIIFLK 125

Query: 149 DIGGTRCVQI--RNWFDYRNHICIVFEKLGPSLYDFLRKNSY--RSFPIDLVRELGRQLL 204
           D   T C +   +N F     + +V E +  +++ +++  +    + P+ LV+    QL 
Sbjct: 126 DYYYTECFKKNEKNIF-----LNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLC 180

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
            ++A++H   + H DLKP+N+L+                           P +  +KL D
Sbjct: 181 RALAYIHSKFICHRDLKPQNLLID--------------------------PNTHTLKLCD 214

Query: 265 FGSTT---FEHQDHSYVVSTRHYRAPEVILGLGWNYPC--DLWSVGCILVELCSGEALFQ 319
           FGS        +  SY+ S R YRAPE++LG   NY    DLWS+GCI+ E+  G  +F 
Sbjct: 215 FGSAKNLLAGQRSVSYICS-RFYRAPELMLG-ATNYTTHIDLWSLGCIIAEMILGYPIFS 272

Query: 320 THENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
              +++ L  + +VLG P    +       A+  F        PD    +D ++ V+   
Sbjct: 273 GQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKF--------PD-VKPKD-LKKVFP-- 320

Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
                       +  D I+ +   L+Y+P +RL   EAL  PFF  D+R P +
Sbjct: 321 ----------KGTPDDAINFISQFLKYEPLKRLNPIEALADPFFD-DLRDPCI 362

Length = 440

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 94.6 bits (236), Expect = 4e-22
 Identities = 79/332 (23%), Positives = 130/332 (39%), Gaps = 88/332 (26%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRCV 156
           G G FG+V       K    A+K V  R I +  +   I  E ++L+    H       V
Sbjct: 2   GVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILE-ECNHPF----IV 56

Query: 157 QIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F  + +I ++ E  LG  L+  LR      F     R     ++ +  ++H   +
Sbjct: 57  KLYRTFKDKKYIYMLMEYCLGGELWTILRDRG--LFDEYTARFYIACVVLAFEYLHNRGI 114

Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+LL S  YVK+ D+ F                    K +  G  T+     
Sbjct: 115 IYRDLKPENLLLDSNGYVKLVDFGF-------------------AKKLKSGQKTWT---- 151

Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 335
                T  Y APE+IL  G+++  D WS+G +L EL +G   F   ++ + + +   +L 
Sbjct: 152 --FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGE-DDEDPMEIYNDIL- 207

Query: 336 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL 395
                             +   +L++P                        ++D +A DL
Sbjct: 208 ------------------KGNGKLEFP-----------------------NYIDKAAKDL 226

Query: 396 IDLLQGLLRYDPAERL-----KAREALRHPFF 422
           I     LLR +P ERL       ++  +H +F
Sbjct: 227 IK---QLLRRNPEERLGNLKGGIKDIKKHKWF 255

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 95.1 bits (236), Expect = 5e-22
 Identities = 86/337 (25%), Positives = 140/337 (41%), Gaps = 63/337 (18%)

Query: 97  LSKMGEGTFGQVVECFD-NEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARHDIG 151
           ++++GEG +G+V +  D       VA+K VR +    E    + + E+ VL+ L   +  
Sbjct: 6   VAEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLETFEHP 64

Query: 152 GTR-----CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                   C   R   D    + +VFE +   L  +L K      P + ++++  QLL  
Sbjct: 65  NVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 122

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + F+H  R++H DLKP+NIL+ S+  +K+ D+                      ++  F 
Sbjct: 123 LDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL-------------------ARIYSFQ 163

Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
                    + VV T  YRAPEV+L   +  P DLWSVGCI  E+   + LF+   +++ 
Sbjct: 164 MAL------TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ 217

Query: 327 LAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
           L  +  V+G P                       DWP                 +   + 
Sbjct: 218 LGKILDVIGLPGEE--------------------DWPRDVALPRQAFHSKSAQPIEKFVT 257

Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
              +       DLL   L ++PA+R+ A  AL HP+F
Sbjct: 258 DIDELGK----DLLLKCLTFNPAKRISAYSALSHPYF 290

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 94.4 bits (235), Expect = 1e-21
 Identities = 89/340 (26%), Positives = 146/340 (42%), Gaps = 72/340 (21%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA---AMIEIDVLQRLAR------ 147
           L K+GEG++  V +       +LVA+K +R +     A   A+ E  +L+ L        
Sbjct: 10  LDKLGEGSYATVYKGRSKLTGQLVALKEIR-LEHEEGAPFTAIREASLLKDLKHANIVTL 68

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           HDI  T           +  + +VFE L   L  ++         +  VR    QLL  +
Sbjct: 69  HDIIHT-----------KKTLTLVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGL 116

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
           A+ H+ R++H DLKP+N+L+     +K+ D+  L+R+       K++P           S
Sbjct: 117 AYCHQRRVLHRDLKPQNLLISERGELKLADFG-LARA-------KSVP-----------S 157

Query: 268 TTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHEN-LE 325
            T+ ++     V T  YR P+V+LG   ++   D+W VGCI  E+ +G  LF    +  +
Sbjct: 158 KTYSNE-----VVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVED 212

Query: 326 HLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
            L  + RVLG P                        WP G +S    +        P  +
Sbjct: 213 QLHKIFRVLGTPTEE--------------------TWP-GVSSNPEFKPYSFPFYPPRPL 251

Query: 385 MQHVDH--SAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           + H           +L    L+Y+P +R+ A EA++HP+F
Sbjct: 252 INHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 93.9 bits (233), Expect = 2e-21
 Identities = 84/331 (25%), Positives = 145/331 (43%), Gaps = 57/331 (17%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLARHDIGG 152
           L K+GEGT+  V +        LVA+K +R   ++ E A    + E+ +L+ L   +I  
Sbjct: 11  LDKLGEGTYATVYKGRSKLTDNLVALKEIRL--EHEEGAPCTAIREVSLLKDLKHANI-- 66

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              V + +       + +VFE L   L  +L  +   S  +  V+    QLL  + + H 
Sbjct: 67  ---VTLHDIIHTEKSLTLVFEYLDKDLKQYL-DDCGNSINMHNVKLFLFQLLRGLNYCHR 122

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            +++H DLKP+N+L+     +K+ D+  L+R+       K++P  +              
Sbjct: 123 RKVLHRDLKPQNLLINERGELKLADFG-LARA-------KSIPTKT-------------- 160

Query: 273 QDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
             +S  V T  YR P+++LG   ++   D+W VGCI  E+ +G  LF      E L  + 
Sbjct: 161 --YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIF 218

Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
           R+LG                         WP G  S +  ++        + +  H    
Sbjct: 219 RILGTPTEET-------------------WP-GILSNEEFKSYNYPKYRADCLHNHAPRL 258

Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             D  +LL  LL+++  +R+ A EA++HP+F
Sbjct: 259 DSDGAELLSKLLQFEGRKRISAEEAMKHPYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 92.3 bits (230), Expect = 3e-21
 Identities = 75/336 (22%), Positives = 129/336 (38%), Gaps = 90/336 (26%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKI--VRSINKYREAAMIEIDVLQRLARHDIGG 152
           + +  +G+G+ G V +       ++ A+K   V    ++R+  + E+  L+      +  
Sbjct: 4   ERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYV-- 61

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V+    F     I IV E + G SL D L+K      P  ++  + RQ+L+ + ++H
Sbjct: 62  ---VKCYGAFYKEGEISIVLEYMDGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLH 116

Query: 212 -ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 269
            +  +IH D+KP N+L+                 +  G           +K+ DFG S  
Sbjct: 117 TKRHIIHRDIKPSNLLI-----------------NSKGE----------VKIADFGISKV 149

Query: 270 FEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
            E+   Q +++V  T  Y +PE I G  ++Y  D+WS+G  L+E   G+  F        
Sbjct: 150 LENTLDQCNTFV-GTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSF 208

Query: 327 LAMMERVL-GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
             +M+ +  GP P                       P    S                  
Sbjct: 209 FELMQAICDGPPP---------------------SLPAEEFSP----------------- 230

Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
                   +  D +   L+ DP +R  A E L+HPF
Sbjct: 231 --------EFRDFISACLQKDPKKRPSAAELLQHPF 258

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 93.6 bits (233), Expect = 3e-21
 Identities = 86/329 (26%), Positives = 148/329 (44%), Gaps = 51/329 (15%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREA--AMIEIDVLQRLARHDIGGTRCV 156
           +G G +G V    ++E  E VAIK I  + +   +A   + EI +L+ L   ++   + +
Sbjct: 13  IGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDI 72

Query: 157 QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLI 216
                 +  N + IV+E +   L+  +R +  ++   D  +    QLL  + ++H   ++
Sbjct: 73  MPPPHREAFNDVYIVYELMDTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSANVL 130

Query: 217 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 276
           H DLKP N+LL +   +K+ D+  L+R++ +   F                         
Sbjct: 131 HRDLKPSNLLLNANCDLKICDFG-LARTTSEKGDFMT----------------------E 167

Query: 277 YVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 335
           YVV TR YRAPE++L    +    D+WSVGCI  EL   + LF   + +  L ++  +LG
Sbjct: 168 YVV-TRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLG 226

Query: 336 -PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 394
            P    +    + +A +Y R           T R S   ++              H+   
Sbjct: 227 SPSEEDLGFIRNEKARRYIRSLPY-------TPRQSFARLFP-------------HANPL 266

Query: 395 LIDLLQGLLRYDPAERLKAREALRHPFFT 423
            IDLL+ +L +DP++R+   EAL HP+  
Sbjct: 267 AIDLLEKMLVFDPSKRITVEEALAHPYLA 295

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 91.8 bits (228), Expect = 5e-21
 Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 35/219 (15%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV------RSINKYREAAMIEIDVLQRLARHDIGGT 153
           +G+G FG+V  C+D +    +A+K V          K   A   EI +L+ L +H+    
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHE---- 64

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
           R VQ          + I  E + G S+ D L+  +Y +    + R+  RQ+LE V ++H 
Sbjct: 65  RIVQYYGCLRDDETLSIFMEYMPGGSVKDQLK--AYGALTETVTRKYTRQILEGVEYLHS 122

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
             ++H D+K  NIL  SA  VK+ D+     +SK         +   I      S T   
Sbjct: 123 NMIVHRDIKGANILRDSAGNVKLGDFG----ASK---------RLQTICS----SGTGM- 164

Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                V  T ++ +PEVI G G+    D+WSVGC +VE+
Sbjct: 165 ---KSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEM 200

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 93.2 bits (232), Expect = 5e-21
 Identities = 93/364 (25%), Positives = 143/364 (39%), Gaps = 75/364 (20%)

Query: 81  HYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSIN 129
            Y   +G++   +  R + L  +G G  G V   +D    + VAIK        +  +  
Sbjct: 2   FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKR 61

Query: 130 KYREAAMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNS 187
            YRE       VL +L  H   IG       +   +    + +V E +  +L   ++   
Sbjct: 62  AYREL------VLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQ--- 112

Query: 188 YRSFPIDLVRE----LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243
                +DL  E    L  Q+L  +  +H   +IH DLKP NI++ S              
Sbjct: 113 -----MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-------------- 153

Query: 244 SSKDGSYFKNLPKSSAIKLIDFG-----STTFEHQDHSYVVSTRHYRAPEVILGLGWNYP 298
                           +K++DFG      T+F      YVV TR+YRAPEVILG+G+   
Sbjct: 154 -------------DCTLKILDFGLARTAGTSFMMTP--YVV-TRYYRAPEVILGMGYKEN 197

Query: 299 CDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFR-RGA 357
            D+WSVGCI+ E+  G  LF   ++++    +   LG      + R       Y   R  
Sbjct: 198 VDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPK 257

Query: 358 RLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL 417
              +       D +         P     H    A    DLL  +L  DP +R+   +AL
Sbjct: 258 YAGYSFEELFPDVL--------FPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDAL 309

Query: 418 RHPF 421
           +HP+
Sbjct: 310 QHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 93.1 bits (232), Expect = 6e-21
 Identities = 86/364 (23%), Positives = 141/364 (38%), Gaps = 118/364 (32%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQRLAR 147
            LS +G G +GQV   FD +    VAIK         + +   YRE          RL +
Sbjct: 19  NLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYREL---------RLLK 69

Query: 148 HDIGGTRCVQIRNWFDYRNHIC------------------IVFEKLGPSLYDFLRKNSYR 189
           H              D+ N I                   +V   +G  L + ++    +
Sbjct: 70  H-------------MDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKC---Q 113

Query: 190 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249
               D ++ L  Q+L  + ++H   +IH DLKP NI                        
Sbjct: 114 KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNI------------------------ 149

Query: 250 YFKNLPKSSAIKLIDFG---STTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVG 305
               + +   +K++DFG    T  E   +   V+TR YRAPE++L  + +N   D+WSVG
Sbjct: 150 ---AVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVG 203

Query: 306 CILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA 365
           CI+ EL +G+ LF   ++++ L  +  ++G     ++ +    + + + +          
Sbjct: 204 CIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQS--------- 254

Query: 366 TSRDSMRAVWKLLRLPNLIMQHVD-------HSAGDLIDLLQGLLRYDPAERLKAREALR 418
                         LP   M   D        +    IDLL+ +L  DP +R+ A EAL 
Sbjct: 255 --------------LP--QMPKKDFKEVFSGANP-LAIDLLEKMLVLDPDKRITAAEALA 297

Query: 419 HPFF 422
           HP+ 
Sbjct: 298 HPYL 301

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 92.3 bits (229), Expect = 1e-20
 Identities = 84/337 (24%), Positives = 147/337 (43%), Gaps = 58/337 (17%)

Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHD 149
           R + L ++G G +G V    D      VAIK + R      + + A  E+ +L+ + +H+
Sbjct: 16  RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-KHE 74

Query: 150 --IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
             IG           D  +   +V   +G  L   ++   +     D ++ L  Q+L+ +
Sbjct: 75  NVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMK---HEKLSEDRIQFLVYQMLKGL 131

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
            ++H   +IH DLKP N L V+ +                            +K++DFG 
Sbjct: 132 KYIHAAGIIHRDLKPGN-LAVNED--------------------------CELKILDFGL 164

Query: 268 TTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
                 + +  V TR YRAPEVIL  + +    D+WSVGCI+ E+ +G+ LF+ H++L+ 
Sbjct: 165 ARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ 224

Query: 327 LAMMERVLGPLPHHMVIR-ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
           L  + +V G      V +     A+ Y ++  R    D  +                 ++
Sbjct: 225 LMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRS-----------------LL 267

Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
            + +  A   +++L+ +L  D   R+ A EAL HP+F
Sbjct: 268 PNANPLA---VNVLEKMLVLDAESRITAAEALAHPYF 301

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 91.8 bits (228), Expect = 1e-20
 Identities = 87/340 (25%), Positives = 144/340 (42%), Gaps = 65/340 (19%)

Query: 90  LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----EIDVLQR 144
           +T R   L  +G G FG V    D    + VAIK  + +  +    +      E+ +L+ 
Sbjct: 8   ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIK--KIMKPFSTPVLAKRTYRELKLLKH 65

Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
           L   +I     + I    D    I  V E LG  L+  L     R      ++    Q+L
Sbjct: 66  LRHENIISLSDIFISPLED----IYFVTELLGTDLHRLLTS---RPLEKQFIQYFLYQIL 118

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
             + ++H   ++H DLKP NIL+                            ++  +K+ D
Sbjct: 119 RGLKYVHSAGVVHRDLKPSNILI---------------------------NENCDLKICD 151

Query: 265 FG-STTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHE 322
           FG +   + Q   YV STR+YRAPE++L    ++   D+WS GCI  E+  G+ LF   +
Sbjct: 152 FGLARIQDPQMTGYV-STRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKD 210

Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL-LRLP 381
           ++   +++  +LG  P  ++                        S +++R V  L  R P
Sbjct: 211 HVNQFSIITDLLGTPPDDVINTI--------------------CSENTLRFVQSLPKREP 250

Query: 382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
               +   ++    IDLL+ +L +DP +R+ A EAL HP+
Sbjct: 251 VPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPY 290

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 89.8 bits (223), Expect = 2e-20
 Identities = 79/332 (23%), Positives = 126/332 (37%), Gaps = 92/332 (27%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI------EIDVLQRLARHDIGGT 153
           +G G+FG V E  + +  +  A+K V   +  +           EI +L +L   +I   
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNI--- 64

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             VQ        +++ I  E + G SL   L+K  Y SFP  ++R   RQ+L  + ++H+
Sbjct: 65  --VQYLGTEREEDNLYIFLELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHD 120

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TF 270
              +H D+K  NIL+                   +G           +KL DFG      
Sbjct: 121 RNTVHRDIKGANILV-----------------DTNG----------VVKLADFGMAKQVV 153

Query: 271 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
           E         + ++ APEVI   G +    D+WS+GC ++E+ +G+  +     LE +A 
Sbjct: 154 EFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWS---QLEGVAA 210

Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
           +                      F+ G   + P                     I  H+ 
Sbjct: 211 V----------------------FKIGRSKELP--------------------PIPDHLS 228

Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
             A D I      L+ DP+ R  A E L HPF
Sbjct: 229 DEAKDFILK---CLQRDPSLRPTAAELLEHPF 257

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 89.6 bits (223), Expect = 3e-20
 Identities = 77/343 (22%), Positives = 126/343 (36%), Gaps = 103/343 (30%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR----LARHDI 150
            +L  +G+G+FG+V +  D    ++VAIK++       E A  EI+ +Q+    L+    
Sbjct: 4   TLLECIGKGSFGEVYKAIDKRTNQVVAIKVID-----LEEAEDEIEDIQQEIQFLS---- 54

Query: 151 GGTRCVQIRNWF-----DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
              R   I  ++       +  + I+ E   G S  D L+           +  + R++L
Sbjct: 55  -QCRSPYITKYYGSFLKGSK--LWIIMEYCGGGSCLDLLK---PGKLDETYIAFILREVL 108

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
             + ++HE   IH D+K  NILL                 S++G           +KL D
Sbjct: 109 LGLEYLHEEGKIHRDIKAANILL-----------------SEEGD----------VKLAD 141

Query: 265 FGST---TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
           FG +   T      +  V T  + APEVI   G++   D+WS+G   +EL  GE      
Sbjct: 142 FGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEP----- 196

Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
                         PL                                 MR ++ + +  
Sbjct: 197 --------------PLSDL----------------------------HPMRVLFLIPKNN 214

Query: 382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
              ++    S     D +   L  DP ER  A+E L+H F  +
Sbjct: 215 PPSLEGNKFSK-PFKDFVSLCLNKDPKERPSAKELLKHKFIKK 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 89.7 bits (222), Expect = 6e-20
 Identities = 84/331 (25%), Positives = 147/331 (44%), Gaps = 57/331 (17%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLARHDIGG 152
           L K+GEGT+  V +      + LVA+K +R   ++ E A    + E+ +L+ L   +I  
Sbjct: 11  LEKLGEGTYATVFKGRSKLTENLVALKEIRL--EHEEGAPCTAIREVSLLKDLKHANI-- 66

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              V + +       + +VFE L   L  ++  +      +  V+    Q+L  +A+ H 
Sbjct: 67  ---VTLHDIVHTDKSLTLVFEYLDKDLKQYM-DDCGNIMSMHNVKIFLYQILRGLAYCHR 122

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            +++H DLKP+N+L+     +K+ D+  L+R+       K++P  +              
Sbjct: 123 RKVLHRDLKPQNLLINERGELKLADFG-LARA-------KSVPTKT-------------- 160

Query: 273 QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
             +S  V T  YR P+V+LG   ++   D+W VGCI  E+ SG  LF      + L ++ 
Sbjct: 161 --YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIF 218

Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
           R+LG                         WP G +S D  +        P  ++ H    
Sbjct: 219 RLLGT-------------------PTEETWP-GISSNDEFKNYNFPKYKPQPLINHAPRL 258

Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             + I+LL   L+Y+  +R+ A EA++H +F
Sbjct: 259 DTEGIELLTKFLQYESKKRISAEEAMKHAYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 87.7 bits (217), Expect = 2e-19
 Identities = 87/334 (26%), Positives = 143/334 (42%), Gaps = 60/334 (17%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMIEIDVLQRLARHDIGGT 153
           L K+GEG++  V +       +LVA+K++ S+         A+ E  +L+ L   +I   
Sbjct: 10  LEKLGEGSYATVYKGISRINGQLVALKVI-SMKTEEGVPFTAIREASLLKGLKHANI--- 65

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V + +    +  +  VFE +   L  ++ ++     P + VR    QLL  +A++H  
Sbjct: 66  --VLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYN-VRLFMFQLLRGLAYIHGQ 122

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTF 270
            ++H DLKP+N+L+                     SY   L      KL DFG   + + 
Sbjct: 123 HILHRDLKPQNLLI---------------------SYLGEL------KLADFGLARAKSI 155

Query: 271 EHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQ-THENLEHLA 328
             Q +S  V T  YR P+V+LG   ++   D+W  GCI +E+  G+  F    +  E L 
Sbjct: 156 PSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLE 215

Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            +  VLG +P         +   Y     + +W      +  +R VWK L  P       
Sbjct: 216 KIWTVLG-VPTEDTWPGVSKLPNY-----KPEWFLPCKPQ-QLRVVWKRLSRPP------ 262

Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                   DL   +L   P +R+ A++AL HP+F
Sbjct: 263 -----KAEDLASQMLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 88.6 bits (220), Expect = 2e-19
 Identities = 61/233 (26%), Positives = 97/233 (41%), Gaps = 50/233 (21%)

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
           D V+    Q+L  + ++H   ++H D+KP N+L+ S                        
Sbjct: 103 DHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS------------------------ 138

Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYV----VSTRHYRAPEVILGLG-WNYPCDLWSVGCIL 308
              +  +K+ DFG    E  D S      V T++YRAPE+++G   +    D+WSVGCI 
Sbjct: 139 ---NCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIF 195

Query: 309 VELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR 368
            EL     LFQ    ++ L ++  +LG      +  A   A  +  RG     P    S 
Sbjct: 196 AELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRG-----PHKPPSL 250

Query: 369 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
             +            +     H A   + LL  +L +DP +R+ A +AL HP+
Sbjct: 251 PVLY----------TLSSQATHEA---VHLLCRMLVFDPDKRISAADALAHPY 290

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 87.0 bits (215), Expect = 8e-19
 Identities = 68/229 (29%), Positives = 99/229 (43%), Gaps = 47/229 (20%)

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++                
Sbjct: 131 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA---------------- 173

Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                 T F      YVV TR+YRAPEVILG+G+    D+WSVGCI+ EL  G  +FQ  
Sbjct: 174 -----CTNFMMT--PYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225

Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD-------WPDGATSRDSMRAV 374
           ++++    +   LG      + R       Y     +         +PD     +S R  
Sbjct: 226 DHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDK 285

Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
            K                    DLL  +L  DP +R+   EALRHP+ T
Sbjct: 286 LK---------------TSQARDLLSKMLVIDPDKRISVDEALRHPYIT 319

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 84.2 bits (209), Expect = 2e-18
 Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 46/228 (20%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
           IL K+GEG++G V +    E  ++VAIK+V  + +  +  + EI +L++           
Sbjct: 7   ILEKLGEGSYGSVYKAIHKETGQVVAIKVV-PVEEDLQEIIKEISILKQ--------CDS 57

Query: 156 VQIRNWFD---YRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
             I  ++        + IV E    G S+ D ++  + ++   + +  +  Q L+ + ++
Sbjct: 58  PYIVKYYGSYFKNTDLWIVMEYCGAG-SVSDIMKITN-KTLTEEEIAAILYQTLKGLEYL 115

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 269
           H  + IH D+K  NILL                 +++G            KL DFG S  
Sbjct: 116 HSNKKIHRDIKAGNILL-----------------NEEG----------QAKLADFGVSGQ 148

Query: 270 FEH--QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
                   + V+ T  + APEVI  +G+N   D+WS+G   +E+  G+
Sbjct: 149 LTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGK 196

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 84.7 bits (209), Expect = 2e-18
 Identities = 89/338 (26%), Positives = 152/338 (44%), Gaps = 66/338 (19%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRLARHDIGGTR 154
           L K+GEG++  V +       +LVA+K++R   +      A+ E  +L+ L   +I    
Sbjct: 10  LEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANI---- 65

Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
            V + +    +  + +VFE +   L  ++ K+     P + V+    QLL  ++++H+  
Sbjct: 66  -VLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHP-ENVKLFLFQLLRGLSYIHQRY 123

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           ++H DLKP+N+L+     +K+ D+  L+R+       K++P           S T+ ++ 
Sbjct: 124 ILHRDLKPQNLLISDTGELKLADFG-LARA-------KSVP-----------SHTYSNE- 163

Query: 275 HSYVVSTRHYRAPEVILGLGWNYPC-DLWSVGCILVELCSGEALFQTHENLE-HLAMMER 332
               V T  YR P+V+LG      C D+W VGCI VE+  G A F   ++++  L  +  
Sbjct: 164 ----VVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFL 219

Query: 333 VLG-------PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
           VLG       P  H +      R   Y              S  ++R  W  L       
Sbjct: 220 VLGTPNEDTWPGVHSLPHFKPERFTLY--------------SPKNLRQAWNKL------- 258

Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
            +V+H+     DL   LL+  P  RL A+ AL H +F+
Sbjct: 259 SYVNHAE----DLASKLLQCFPKNRLSAQAALSHEYFS 292

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 84.4 bits (209), Expect = 5e-18
 Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 62/235 (26%)

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  + ++H   ++H DLKP N+L+ +   +K+ D+  L+R       F   P  +A  
Sbjct: 113 QILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFG-LARG------FSENPGENAGF 165

Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPC----DLWSVGCILVELCSGEAL 317
           + ++             V+TR YRAPE++L            D+WSVGCIL EL   + +
Sbjct: 166 MTEY-------------VATRWYRAPEIMLS---FQSYTKAIDVWSVGCILAELLGRKPV 209

Query: 318 FQTHENLEHLAMMERVLGPLPHHMVIR-ADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376
           F+  + ++ L  + +VLG      + R    +A+ Y R                      
Sbjct: 210 FKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIR---------------------- 247

Query: 377 LLRLPNL-------IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
              LPN+       I  + +  A   +DLL+ LL +DP +R+   EAL HP+   
Sbjct: 248 --SLPNIPKKPFESIFPNANPLA---LDLLEKLLAFDPTKRISVEEALEHPYLAI 297

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 82.5 bits (204), Expect = 8e-18
 Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 40/226 (17%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHDI 150
           KI  K+G+G F  V +        +VA+K V+       K R+  + EID+L++L   ++
Sbjct: 5   KIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNV 64

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLR-----KNSYRSFPIDLVRELGRQLLE 205
                ++    F   N + IV E L  +  D  R     K   R  P   + +   QL  
Sbjct: 65  -----IKYLASFIENNELNIVLE-LADA-GDLSRMIKHFKKQKRLIPERTIWKYFVQLCS 117

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           ++  MH  R++H D+KP N+ + +   VK+ D          G +F     SS       
Sbjct: 118 ALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGL-------GRFF-----SS------- 158

Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
             TT  H     +V T +Y +PE I   G+N+  D+WS+GC+L E+
Sbjct: 159 -KTTAAHS----LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 83.6 bits (206), Expect = 1e-17
 Identities = 98/363 (26%), Positives = 153/363 (42%), Gaps = 60/363 (16%)

Query: 74  RPDDKDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           R    +  Y   IG++   +  R + L  +G G  G V   +D   +  VAIK + R   
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62

Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ VL +   H   IG       +   +    + IV E +  +L   ++ 
Sbjct: 63  NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM 121

Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   + +  L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++
Sbjct: 122 ----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 176

Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
             G+ F   P                     YVV TR+YRAPEVILG+G+    D+WSVG
Sbjct: 177 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVG 212

Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
           CI+ E+  G  LF   ++++    ++E++  P P  M      V        KY      
Sbjct: 213 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFE 272

Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
             +PD     DS               +H    A    DLL  +L  D ++R+   EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317

Query: 419 HPF 421
           HP+
Sbjct: 318 HPY 320

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 83.2 bits (205), Expect = 2e-17
 Identities = 70/227 (30%), Positives = 104/227 (45%), Gaps = 47/227 (20%)

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 177

Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 178 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221

Query: 322 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 277

Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
                      +H    A    DLL  +L  DPA+R+   EAL+HP+
Sbjct: 278 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 81.3 bits (201), Expect = 3e-17
 Identities = 82/339 (24%), Positives = 128/339 (37%), Gaps = 90/339 (26%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA--MIEIDVLQRLARHDIGGT 153
           I+ ++G+G FG+V +    E     A KI++ I    E    M+EID+L    +H     
Sbjct: 9   IIGELGDGAFGKVYKAQHKETGLFAAAKIIQ-IESEEELEDFMVEIDILSEC-KHP---- 62

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V +   + Y N + I+ E       D +     R      +R + RQ+LE++ F+H  
Sbjct: 63  NIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH 122

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TF 270
           ++IH DLK  NILL                   DG           +KL DFG +     
Sbjct: 123 KVIHRDLKAGNILLTL-----------------DGD----------VKLADFGVSAKNKS 155

Query: 271 EHQDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
             Q     + T ++ APEV+         ++Y  D+WS+G  L+EL   E          
Sbjct: 156 TLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEP--------- 206

Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
                       PHH +                          + MR + K+L+     +
Sbjct: 207 ------------PHHEL--------------------------NPMRVLLKILKSEPPTL 228

Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
                 +    D L+  L  DP +R  A E L+HPF + 
Sbjct: 229 DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 82.1 bits (203), Expect = 3e-17
 Identities = 86/345 (24%), Positives = 132/345 (38%), Gaps = 101/345 (29%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKI-----VRSINKYREAAMIEIDVLQRLARHD 149
           +IL+++G+G +GQV      +  E+VA+K      +  +N+ R   + E D+L    + +
Sbjct: 4   QILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHV-LTERDILTT-TKSE 61

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                 V++   F    ++ +  E + G      L  N+      D  R    ++ E+V 
Sbjct: 62  W----LVKLLYAFQDDEYLYLAMEYVPGGDFRTLL--NNLGVLSEDHARFYMAEMFEAVD 115

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-S 267
            +HEL  IH DLKPEN L+                    G           IKL DFG S
Sbjct: 116 ALHELGYIHRDLKPENFLI-----------------DASGH----------IKLTDFGLS 148

Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE-LC-----SGEALFQTH 321
                  +S VV +  Y APEV+ G G+++  D WS+GC+L E LC     SG    +T 
Sbjct: 149 KGIVTYANS-VVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETW 207

Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV-WKLLRL 380
           ENL++                                L  P     R ++    W L+  
Sbjct: 208 ENLKYWKET----------------------------LQRPVYDDPRFNLSDEAWDLIT- 238

Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR-HPFFTR 424
             LI                     DP+ R  + E ++ HPFF  
Sbjct: 239 -KLIN--------------------DPSRRFGSLEDIKNHPFFKE 262

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 79.7 bits (196), Expect = 1e-16
 Identities = 78/344 (22%), Positives = 136/344 (39%), Gaps = 88/344 (25%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDIGGT 153
           +I+ ++G+G FG+V +  + E   L A K++ + ++   E  M+EID+L      +I   
Sbjct: 8   EIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI--- 64

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ + F Y N++ I+ E       D +     R      +R + +Q LE++ ++HE 
Sbjct: 65  --VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN 122

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTF 270
           ++IH DLK  NIL                  + DG           IKL DFG     T 
Sbjct: 123 KIIHRDLKAGNILF-----------------TLDGD----------IKLADFGVSAKNTR 155

Query: 271 EHQDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
             Q     + T ++ APEV++        ++Y  D+WS+G  L+E+   E          
Sbjct: 156 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEP--------- 206

Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
                       PHH +                          + MR + K+ +     +
Sbjct: 207 ------------PHHEL--------------------------NPMRVLLKIAKSEPPTL 228

Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
                 + +  D L+  L  +   R    + L+HPF T +  +P
Sbjct: 229 AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSNKP 272

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 79.1 bits (195), Expect = 1e-16
 Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 43/269 (15%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVR-----SINKYREAAMI-----EIDVLQRLARHD 149
           +G G+FG V    +    EL+A+K V      + +K R+ +M+     EI +L+ L   +
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     VQ        +H+ I  E + G S+   L  N+Y +F   LVR   RQ+L+ + 
Sbjct: 68  I-----VQYLGSSLDADHLNIFLEYVPGGSVAALL--NNYGAFEETLVRNFVRQILKGLN 120

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           ++H   +IH D+K  NIL+ +   +K+ D+   K L  +S         P          
Sbjct: 121 YLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPS--------L 172

Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
             + F             + APEV+    +    D+WS+GC++VE+ +G+  F     L+
Sbjct: 173 QGSVF-------------WMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ 219

Query: 326 HLAMM-ERVLGPLPHHMVIRADRRAEKYF 353
            +  + E     +P ++   A    EK F
Sbjct: 220 AIFKIGENASPEIPSNISSEAIDFLEKTF 248

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 76.7 bits (189), Expect = 8e-16
 Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 33/217 (15%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +G+G FG+       E   LV  K V   R   K R  A+ EI +L  L   +I     +
Sbjct: 8   LGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNI-----I 62

Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
              N F   N + I  E   G +LYD + +   + F  ++V     Q++ +V+++H+  +
Sbjct: 63  AYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGI 122

Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           +H D+K  NI L  A  +K+ D+     S   GS +               + T      
Sbjct: 123 LHRDIKTLNIFLTKAGLIKLGDFGI---SKILGSEYS-------------MAET------ 160

Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 312
             VV T +Y +PE+  G+ +N+  D+W++GC+L EL 
Sbjct: 161 --VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELL 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 76.4 bits (188), Expect = 1e-15
 Identities = 75/337 (22%), Positives = 134/337 (39%), Gaps = 89/337 (26%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSI-------NKYREAAMIEIDVLQRLARHDI-- 150
           +G G F    +  D +   L+A+K V  +        +  EA   EI ++ RL    I  
Sbjct: 8   LGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIR 67

Query: 151 --GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
             G T            +H  +  E + G S+   L K  Y +F   ++     QLL  +
Sbjct: 68  MLGATC---------EDSHFNLFVEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGL 116

Query: 208 AFMHELRLIHTDLKPENILLVS-AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           +++HE ++IH D+K  N+L+ S  + +++ D+                   +A +L   G
Sbjct: 117 SYLHENQIIHRDVKGANLLIDSTGQRLRIADF------------------GAAARLAAKG 158

Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
           +   E Q    ++ T  + APEV+ G  +   CD+WSVGC+++E+ + +  +   ++  H
Sbjct: 159 TGAGEFQGQ--LLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH 216

Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
           LA++                      F+  +    P                 +P     
Sbjct: 217 LALI----------------------FKIASATTAPS----------------IP----- 233

Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
             +H +  L D+    L   P +R  +RE L+HP F 
Sbjct: 234 --EHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 76.7 bits (189), Expect = 1e-15
 Identities = 74/268 (27%), Positives = 111/268 (41%), Gaps = 66/268 (24%)

Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
           F+ + H+C+V E +       L KN   + P+D+ R    + + ++ ++H   ++H DLK
Sbjct: 70  FETKRHLCMVMEYVEGGDCATLLKN-IGALPVDMARMYFAETVLALEYLHNYGIVHRDLK 128

Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVST 281
           P+N+L+ S  ++K+ D+      SK G    +L  +     I+    T E  D   V  T
Sbjct: 129 PDNLLITSMGHIKLTDFGL----SKIG--LMSLTTNLYEGHIE--KDTREFLDKQ-VCGT 179

Query: 282 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHM 341
             Y APEVIL  G+  P D W++G IL E   G   F                G  P  +
Sbjct: 180 PEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPF---------------FGDTPEEL 224

Query: 342 ---VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL 398
              VI  D            ++WP+G  +            LP            D  DL
Sbjct: 225 FGQVISDD------------IEWPEGDEA------------LPA-----------DAQDL 249

Query: 399 LQGLLRYDPAERL---KAREALRHPFFT 423
           +  LLR +P ERL    A E  +H FF 
Sbjct: 250 ISRLLRQNPLERLGTGGAFEVKQHRFFL 277

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 75.8 bits (186), Expect = 2e-15
 Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 43/272 (15%)

Query: 96  ILSKMGEGTFGQ---VVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           +L  +GEG+FG+   V     ++K  +  I++ +S +   E +  E  +L ++   +I  
Sbjct: 4   VLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAV-EDSRKEAVLLAKMKHPNI-- 60

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V  +  F+   H+ IV E   G  L   ++    + FP D + +   Q+   V  +H
Sbjct: 61  ---VAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH 117

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
           E R++H D+K +NI              FL+++ K             +KL DFGS    
Sbjct: 118 EKRVLHRDIKSKNI--------------FLTQNGK-------------VKLGDFGSARLL 150

Query: 272 HQDHSYV---VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH--ENLEH 326
               +Y    V T +Y  PE+   + +N   D+WS+GCIL ELC+ +  FQ +  +NL  
Sbjct: 151 TSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLI- 209

Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGAR 358
           L + +    PLP H         ++ F+R  R
Sbjct: 210 LKVCQGSYKPLPSHYSYELRSLIKQMFKRNPR 241

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 76.8 bits (189), Expect = 2e-15
 Identities = 79/335 (23%), Positives = 127/335 (37%), Gaps = 95/335 (28%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHDIGGTRC 155
           +G+GTFG+V+   +    +  A+KI++   I    E A  + E  VLQ   RH       
Sbjct: 3   LGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQN-TRHPF----L 57

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
             ++  F   + +C V E   G  L+  L +   R F  D  R  G +++ ++ ++H   
Sbjct: 58  TALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCD 115

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +++ DLK EN++L    ++K+ D+       K+G              I  G+T      
Sbjct: 116 VVYRDLKLENLMLDKDGHIKITDFGL----CKEG--------------ISDGATM----- 152

Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMER 332
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 153 -KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 211

Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                                                        +R P  +        
Sbjct: 212 ---------------------------------------------IRFPRTLSP------ 220

Query: 393 GDLIDLLQGLLRYDPAERL-----KAREALRHPFF 422
            +   LL GLL+ DP +RL      A+E + H FF
Sbjct: 221 -EAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFF 254

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 74.5 bits (183), Expect = 4e-15
 Identities = 66/249 (26%), Positives = 106/249 (42%), Gaps = 40/249 (16%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +G G FG V  C     ++LV IK +   +     R AA  E  VL+ L+  +I     +
Sbjct: 8   VGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNI-----I 62

Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           +    F     + IV E   G +L ++++K        D +     Q+L ++  +H   +
Sbjct: 63  EYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLI 122

Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQD 274
           +H DLK +NILL   + V                          +K+ DFG S     + 
Sbjct: 123 LHRDLKTQNILLDKHKMV--------------------------VKIGDFGISKILSSKS 156

Query: 275 HSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM--ME 331
            +Y VV T  Y +PE+  G  +N   D+W++GC+L EL S +  F+   NL  L +  M 
Sbjct: 157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEA-ANLPALVLKIMS 215

Query: 332 RVLGPLPHH 340
               P+   
Sbjct: 216 GTFAPISDR 224

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 74.1 bits (183), Expect = 5e-15
 Identities = 53/233 (22%), Positives = 90/233 (38%), Gaps = 49/233 (21%)

Query: 95  KILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARH 148
            +  K+GEG FG+V +       + K+  VA+K ++     ++      E  ++++L  H
Sbjct: 2   TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKL-DH 60

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
                 +G   C +          + IV E    G  L D+LRKN  +   +  +     
Sbjct: 61  PNIVKLLGV--CTE-------EEPLMIVMEYMPGG-DLLDYLRKNRPKELSLSDLLSFAL 110

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAI 260
           Q+   + ++     IH DL   N L+     VK+ D  F LSR   D  Y+K       I
Sbjct: 111 QIARGMEYLESKNFIHRDLAARNCLVGENLVVKISD--FGLSRDLYDDDYYKVKGGKLPI 168

Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
           +                      + APE +    +    D+WS G +L E+ +
Sbjct: 169 R----------------------WMAPESLKEGKFTSKSDVWSFGVLLWEIFT 199

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 74.7 bits (183), Expect = 5e-15
 Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 45/232 (19%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDIGGT 153
           +I+ ++G+G FG+V +  + E   L A K++ + ++   E  M+EI++L       I   
Sbjct: 15  EIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYI--- 71

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++   F +   + I+ E       D +     R      ++ + RQ+LE++ ++H +
Sbjct: 72  --VKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM 129

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST----- 268
           ++IH DLK  N+LL                 + DG           IKL DFG +     
Sbjct: 130 KIIHRDLKAGNVLL-----------------TLDGD----------IKLADFGVSAKNVK 162

Query: 269 TFEHQDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGE 315
           T + +D    + T ++ APEV++        ++Y  D+WS+G  L+E+   E
Sbjct: 163 TLQRRDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 212

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 74.1 bits (182), Expect = 6e-15
 Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 43/232 (18%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEG+FG+ +     E  +   IK   I +   K RE +  E+ VL  +   +I   
Sbjct: 5   VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNI--- 61

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             VQ +  F+   ++ IV +   G  LY  +       FP D + +   Q+  ++  +H+
Sbjct: 62  --VQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD 119

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-----S 267
            +++H D+K +NI L                 +KDG           IKL DFG     +
Sbjct: 120 RKILHRDIKSQNIFL-----------------TKDG----------TIKLGDFGIARVLN 152

Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
           +T E       + T +Y +PE+     +N   D+W++GC+L E+C+ +  F+
Sbjct: 153 STVELA--RTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFE 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 73.9 bits (181), Expect = 7e-15
 Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 37/221 (16%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVR------SINKYREAAMIEIDVLQRLARHDIGGT 153
           +G+G FG+V  C+D +    +A+K V+        +K   A   EI +L+ L        
Sbjct: 10  LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHE----- 64

Query: 154 RCVQIRNWF-DYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           R VQ      D       +F +  P  S+ D L+  SY +   ++ R+  RQ+LE V+++
Sbjct: 65  RIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLK--SYGALTENVTRKYTRQILEGVSYL 122

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H   ++H D+K  NIL  S   VK+ D+                  S  ++ I    T  
Sbjct: 123 HSNMIVHRDIKGANILRDSVGNVKLGDFG----------------ASKRLQTICLSGTGM 166

Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
           +      V  T ++ +PEVI G G+    D+WSVGC +VE+
Sbjct: 167 KS-----VTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEM 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 73.4 bits (181), Expect = 1e-14
 Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 42/244 (17%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIG 151
           ++L  +G+G+FG V +       +++  K +   N   K ++  + E+++L+ L   +I 
Sbjct: 3   EVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNI- 61

Query: 152 GTRCVQIRNWF-DYRNH-ICIVFEKL-GPSLYDFLRK--NSYRSFPIDLVRELGRQLLES 206
               V+  +   D  N  + IV E   G  L   ++K     +    + +  +  QLL +
Sbjct: 62  ----VRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLA 117

Query: 207 VAFMHEL-----RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           +   H        ++H DLKP NI L +   VK+ D+  L++     S F          
Sbjct: 118 LYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFG-LAKILGHDSSF---------- 166

Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                + T+        V T +Y +PE +  + ++   D+WS+GC++ ELC+    F   
Sbjct: 167 -----AKTY--------VGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTAR 213

Query: 322 ENLE 325
             L+
Sbjct: 214 NQLQ 217

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 72.9 bits (179), Expect = 1e-14
 Identities = 64/265 (24%), Positives = 100/265 (37%), Gaps = 80/265 (30%)

Query: 162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL 220
           F  ++++ +V E L G      ++       P D  ++   +++  V  +H+  +IH D+
Sbjct: 66  FQSKDYLYLVMEYLNGGDCASLIKTLGG--LPEDWAKQYIAEVVLGVEDLHQRGIIHRDI 123

Query: 221 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 280
           KPEN+L+    ++K+ D+  LSR+  +   F                           V 
Sbjct: 124 KPENLLIDQTGHLKLTDFG-LSRNGLENKKF---------------------------VG 155

Query: 281 TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHH 340
           T  Y APE ILG+G +   D WS+GC++ E   G   F                   P  
Sbjct: 156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET---------------PDA 200

Query: 341 MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ 400
           +      R         R++WP+      S  AV                      DL+ 
Sbjct: 201 VFDNILSR---------RINWPEEVKEFCSPEAV----------------------DLIN 229

Query: 401 GLLRYDPAERLKA---REALRHPFF 422
            LL  DPA+RL A   +E   HPFF
Sbjct: 230 RLLCMDPAKRLGANGYQEIKSHPFF 254

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 72.5 bits (178), Expect = 2e-14
 Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 33/227 (14%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSIN-KYREAAMIEIDVLQRLARHDIGG 152
           IL+K+G+G+FG V +      K + A+K +    +N + RE A+ E  VL +L    I  
Sbjct: 4   ILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYI-- 61

Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              ++    F  +  + IV E      L+  L+    R  P D V     Q+L  +A +H
Sbjct: 62  ---IRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH 118

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
             +++H D+K  N+ L + + VK+ D   +++   D + F N                  
Sbjct: 119 SKKILHRDIKSLNLFLDAYDNVKIGDLG-VAKLLSDNTNFANT----------------- 160

Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
                 +V T +Y +PE+     +N   D+W++G +L E C+G+  F
Sbjct: 161 ------IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPF 201

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 72.3 bits (177), Expect = 3e-14
 Identities = 69/266 (25%), Positives = 110/266 (41%), Gaps = 63/266 (23%)

Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREA--AMIEIDVLQRLA 146
           R  +  ++G+G+FG V    D +      +K+++ I        E   A  E  +L +L 
Sbjct: 1   RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD 60

Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR--KNSYRSFPIDLVRELGRQL 203
              I     V+    F  R+  CI+ E   G  L   L   K++ ++   + V E   QL
Sbjct: 61  HPAI-----VKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQL 115

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
           L  V +MH+ R++H DLK +NI L                            K++ +K+ 
Sbjct: 116 LLGVHYMHQRRILHRDLKAKNIFL----------------------------KNNLLKIG 147

Query: 264 DFG-----------STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 312
           DFG           +TTF          T +Y +PE +   G++   D+WS+GCIL E+C
Sbjct: 148 DFGVSRLLMGSCDLATTF--------TGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMC 199

Query: 313 SGEALFQTHENLEHLAMMERVLGPLP 338
                F+    L    ++  V GP P
Sbjct: 200 CLAHAFEGQNFLS--VVLRIVEGPTP 223

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 72.0 bits (176), Expect = 3e-14
 Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 39/222 (17%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV------RSINKYREAAMIEIDVLQRLARHDIGGT 153
           +G G FG+V  C+D +    +A+K V      +  +K   A   EI +L+ L RHD    
Sbjct: 10  LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHD---- 64

Query: 154 RCVQ----IRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           R VQ    +R+  + +  I + +   G S+ D L+  +Y +   ++ R   RQ+L+ V++
Sbjct: 65  RIVQYYGCLRDPEEKKLSIFVEYMP-GGSIKDQLK--AYGALTENVTRRYTRQILQGVSY 121

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H   ++H D+K  NIL  SA  VK+ D+                  S  I+ I    T 
Sbjct: 122 LHSNMIVHRDIKGANILRDSAGNVKLGDFG----------------ASKRIQTICMSGTG 165

Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
            +      V  T ++ +PEVI G G+    D+WSV C +VE+
Sbjct: 166 IKS-----VTGTPYWMSPEVISGEGYGRKADVWSVACTVVEM 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 71.6 bits (176), Expect = 4e-14
 Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 48/239 (20%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDIGG 152
           +++ ++G GT+G V +  D    ELVAIK++  +    +  +I  EI +L+   RH    
Sbjct: 6   ELIQRIGSGTYGDVYKARDIATGELVAIKVI-KLEPGDDFEIIQQEISMLKE-CRHP--- 60

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V     +  R+ + IV E   G SL D  +           +  + R+ L+ +A++H
Sbjct: 61  -NIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLH 118

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG----- 266
           E   IH D+K  NILL                 ++DG           +KL DFG     
Sbjct: 119 ETGKIHRDIKGANILL-----------------TEDGD----------VKLADFGVSAQL 151

Query: 267 STTFEHQDHSYVVSTRHYRAPEVI---LGLGWNYPCDLWSVGCILVELCSGE-ALFQTH 321
           + T         + T ++ APEV       G++  CD+W++G   +EL   +  +F  H
Sbjct: 152 TATI--AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 72.4 bits (178), Expect = 7e-14
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 14/120 (11%)

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS--RSSKDGSYFKNLPKSSAIKLIDFG 266
            +H+L  IH D+KP+N+LL +  ++K+ D+   +  + S    +++ L  +     +DF 
Sbjct: 116 SIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFI 175

Query: 267 STTFEHQD--HSY----------VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           S     +    ++           V T  Y APEV L  G+N  CD WS+G I+ E+  G
Sbjct: 176 SKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 70.8 bits (173), Expect = 8e-14
 Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 40/233 (17%)

Query: 95  KILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDI 150
           +I  K+G G F +V       D +   L  ++I   ++ K R+  + EID+L++L   ++
Sbjct: 5   QIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNV 64

Query: 151 GGTRCVQIRNWFDYRNHICIVFE-----KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
                ++  + F   N + IV E      L   +  F  K   R  P   V +   QL  
Sbjct: 65  -----IKYLDSFIEDNELNIVLELADAGDLSQMIKYF--KKQKRLIPERTVWKYFVQLCS 117

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           +V  MH  R++H D+KP N+ + +   VK+ D          G +F +            
Sbjct: 118 AVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL-------GRFFSS------------ 158

Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
             TT  H     +V T +Y +PE I   G+N+  D+WS+GC+L E+ + ++ F
Sbjct: 159 -KTTAAHS----LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 70.5 bits (172), Expect = 1e-13
 Identities = 66/253 (26%), Positives = 115/253 (45%), Gaps = 39/253 (15%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVR------SINKYREAAMIEIDVLQRLARHDIGGT 153
           +G+G FG+V  C+D +    +A K V+        +K   A   EI +L+ L +H+    
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHE---- 64

Query: 154 RCVQIRNWF-DYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           R VQ      D       +F +  P  S+ D L+  +Y +    + R+  RQ+LE ++++
Sbjct: 65  RIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLK--AYGALTESVTRKYTRQILEGMSYL 122

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H   ++H D+K  NIL  SA  VK+ D+                  S  ++ I    T  
Sbjct: 123 HSNMIVHRDIKGANILRDSAGNVKLGDFG----------------ASKRLQTICMSGTGI 166

Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
                  V  T ++ +PEVI G G+    D+WS+GC +VE+ + +  +  +E +  +  +
Sbjct: 167 RS-----VTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKI 221

Query: 331 --ERVLGPLPHHM 341
             +     LP H+
Sbjct: 222 ATQPTNPQLPSHI 234

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 70.4 bits (173), Expect = 1e-13
 Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 40/225 (17%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR-SIN-KYREAAMIEIDVLQRLARHDIGGTR 154
           L ++G G  G V +       +++A+K +R  IN   ++  + E+D+L +          
Sbjct: 6   LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHK--------CN 57

Query: 155 C---VQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               V     F     I I  E +     D + K      P  ++ ++   +L+ + ++H
Sbjct: 58  SPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLH 117

Query: 212 E-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           E  ++IH D+KP NIL+ S   +K+ D+  +S                  +L++  + TF
Sbjct: 118 EKHKIIHRDVKPSNILVNSRGQIKLCDFG-VSG-----------------QLVNSLAKTF 159

Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
                   V T  Y APE I G  ++   D+WS+G  L+EL +G 
Sbjct: 160 --------VGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGR 196

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 70.3 bits (173), Expect = 1e-13
 Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 50/233 (21%)

Query: 95  KILSKMGEGTFGQVVECF----DNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH 148
            +  K+GEG FG+V +        +KK  VA+K ++  +  +  E  + E  ++++L  H
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKL-DH 60

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
                 +G   C +          + IV E  + G  L  +LRKN  +    DL+     
Sbjct: 61  PNVVKLLGV--CTE-------EEPLYIVMEYMEGG-DLLSYLRKNRPKLSLSDLL-SFAL 109

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAI 260
           Q+   + ++     IH DL   N L+     VK+ D  F LSR   D  Y++       I
Sbjct: 110 QIARGMEYLESKNFIHRDLAARNCLVGENLVVKISD--FGLSRDLYDDDYYRKRGGKLPI 167

Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
           +                      + APE +    +    D+WS G +L E+ +
Sbjct: 168 R----------------------WMAPESLKEGKFTSKSDVWSFGVLLWEIFT 198

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 70.9 bits (173), Expect = 1e-13
 Identities = 85/350 (24%), Positives = 144/350 (41%), Gaps = 66/350 (18%)

Query: 99  KMGEGTFGQVVECF--DNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           K+G GT+G V +    D + ++  A+K +        +A  EI +L+ L   ++   + V
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKHPNVIALQKV 66

Query: 157 QIRN-----W--FDYRNHI---CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
            + +     W  FDY  H     I F +   +             P  +V+ L  Q+L+ 
Sbjct: 67  FLSHSDRKVWLLFDYAEHDLWHIIKFHRASKA------NKKPMQLPRSMVKSLLYQILDG 120

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + ++H   ++H DLKP NIL++                          P+   +K+ D G
Sbjct: 121 IHYLHANWVLHRDLKPANILVMGEG-----------------------PERGRVKIADMG 157

Query: 267 STTFEHQ------DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ 319
                +       D   VV T  YRAPE++LG   +    D+W++GCI  EL + E +F 
Sbjct: 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217

Query: 320 THE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT-SRDSMR 372
             +      N  H   ++R+       M   AD+  E   +       P+  T  +D  R
Sbjct: 218 CRQEDIKTSNPFHHDQLDRIFSV----MGFPADKDWEDIRKM------PEYPTLQKDFRR 267

Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             +    L   + +H       +  LLQ LL  DP +R+ + +AL+ P+F
Sbjct: 268 TTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 70.2 bits (172), Expect = 1e-13
 Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 45/230 (19%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKY-------REAAMI-----EIDVLQRLAR 147
           +G+GT+G+V    +    E++A+K V  +          R+  M+     EI+ L+ L  
Sbjct: 9   IGKGTYGRVYLALNVTTGEMMAVKQVE-LPATIAGRHDSRQKDMVKALRSEIETLKDLDH 67

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
            +I     VQ   +     ++ I  E + G S+   LR   Y  F   LVR    Q+LE 
Sbjct: 68  LNI-----VQYLGFETTEEYLSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEG 120

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           +A++H   ++H DLK +N+L+ +    K+ D+  +S+ S D   + N    S        
Sbjct: 121 LAYLHSKGILHRDLKADNLLVDADGICKISDFG-ISKKSDD--IYDNDQNMS------MQ 171

Query: 267 STTFEHQDHSYVVSTRHYRAPEVI--LGLGWNYPCDLWSVGCILVELCSG 314
            + F             + APEVI     G++   D+WS+GC+++E+ +G
Sbjct: 172 GSVF-------------WMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAG 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 70.5 bits (172), Expect = 2e-13
 Identities = 85/351 (24%), Positives = 144/351 (41%), Gaps = 68/351 (19%)

Query: 99  KMGEGTFGQVVECF--DNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           K+G GT+G V +    D +     A+K +        +A  EI +L+ L   ++   + V
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKV 66

Query: 157 QIRN-----W--FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDL----VRELGRQLLE 205
            + +     W  FDY  H           +  F R +     P+ L    V+ L  Q+L+
Sbjct: 67  FLSHADRKVWLLFDYAEHDLW-------HIIKFHRASKANKKPVQLPRGMVKSLLYQILD 119

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
            + ++H   ++H DLKP NIL++                          P+   +K+ D 
Sbjct: 120 GIHYLHANWVLHRDLKPANILVMGEG-----------------------PERGRVKIADM 156

Query: 266 GSTTFEHQ------DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALF 318
           G     +       D   VV T  YRAPE++LG   +    D+W++GCI  EL + E +F
Sbjct: 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216

Query: 319 QTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT-SRDSM 371
              +      N  H   ++R+     + M   AD+  E   +       P+ +T  +D  
Sbjct: 217 HCRQEDIKTSNPYHHDQLDRIF----NVMGFPADKDWEDIKKM------PEHSTLMKDFR 266

Query: 372 RAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           R  +    L   + +H          LLQ LL  DP +R+ + +A++ P+F
Sbjct: 267 RNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 69.9 bits (172), Expect = 2e-13
 Identities = 75/339 (22%), Positives = 133/339 (39%), Gaps = 96/339 (28%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDI 150
           + +  +G G+FG+V+        +  A+KI+    I K ++   +  E  +LQ + RH  
Sbjct: 4   EFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHPF 62

Query: 151 GGTRCVQIRNWF-DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                V +   F D  N + +V E + G  L+  LRK+    FP  + R    Q++ ++ 
Sbjct: 63  ----LVNLYGSFQDDSN-LYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALE 115

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++H L +++ DLKPEN+LL S  Y+K+ D+ F                    K +   + 
Sbjct: 116 YLHSLDIVYRDLKPENLLLDSDGYIKITDFGF-------------------AKRVKGRTY 156

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
           T        +  T  Y APE+IL  G+    D W++G ++ E+ +G   F        + 
Sbjct: 157 T--------LCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDD---NPIQ 205

Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
           + E++L                       ++ +P                          
Sbjct: 206 IYEKIL---------------------EGKVRFP-----------------------SFF 221

Query: 389 DHSAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 422
                D  DL++ LL+ D  +RL        +   HP+F
Sbjct: 222 S---PDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWF 257

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 69.6 bits (170), Expect = 3e-13
 Identities = 80/342 (23%), Positives = 129/342 (37%), Gaps = 105/342 (30%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEIDVLQRLARHDIG- 151
           +G+G +G V  C    + +L+A+K V        +  K  E    E+D+L+ L   +I  
Sbjct: 8   LGKGAYGTVY-CGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQ 66

Query: 152 --GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
             GT C+         N I I  E + G S+   L  N +   P  +  +  +Q+L+ VA
Sbjct: 67  YLGT-CLD-------DNTISIFMEFVPGGSISSIL--NRFGPLPEPVFCKYTKQILDGVA 116

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++H   ++H D+K  N++L+                            +  IKLIDFG  
Sbjct: 117 YLHNNCVVHRDIKGNNVMLMP---------------------------NGIIKLIDFGCA 149

Query: 269 -----TFEHQDHSYVVSTRH----YRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
                   H  HS ++ + H    + APEVI   G+    D+WS+GC + E+ +G+    
Sbjct: 150 RRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLA 209

Query: 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379
           + + L  +  +    G +P                                        R
Sbjct: 210 SMDRLAAMFYIGAHRGLMP----------------------------------------R 229

Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
           LP       D  +   ID +   L  D  ER  A + LRH F
Sbjct: 230 LP-------DSFSAAAIDFVTSCLTRDQHERPSALQLLRHDF 264

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 69.2 bits (170), Expect = 3e-13
 Identities = 59/253 (23%), Positives = 108/253 (42%), Gaps = 72/253 (28%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN 160
           GEGT+G+V +    +  +LVAIKI+  I    E    E ++L++ + H           N
Sbjct: 15  GEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNH----------PN 64

Query: 161 WFDY------RNHIC------IVFEKL-GPSLYDFLR--KNSYRSFPIDLVRELGRQLLE 205
              +      +N         +V E   G S+ D ++  +   +    + +  + R+ L 
Sbjct: 65  IATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLR 124

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
            +A++HE ++IH D+K +NILL                            K++ +KL+DF
Sbjct: 125 GLAYLHENKVIHRDIKGQNILLT---------------------------KNAEVKLVDF 157

Query: 266 G----STTFEHQDHSYVVSTRHYRAPEVI-----LGLGWNYPCDLWSVGCILVELCSGE- 315
           G      +   + +++ + T ++ APEVI         ++   D+WS+G   +EL  G+ 
Sbjct: 158 GVSAQLDSTLGRRNTF-IGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKP 216

Query: 316 ---------ALFQ 319
                    ALF+
Sbjct: 217 PLCDMHPMRALFK 229

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 71.3 bits (174), Expect = 4e-13
 Identities = 75/263 (28%), Positives = 124/263 (47%), Gaps = 40/263 (15%)

Query: 87  GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA--MIEIDVL 142
           GE+     +++ K+G G FG+V        +E    K +  R + K RE +  +IE++V+
Sbjct: 8   GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVM 66

Query: 143 QRLARHDIGGTRCV-QIRNWFDYRNHICIVFEKLGPSLYDFLR--KNSYRSF-PID--LV 196
           + L   +I   R + +  N  + + +I + F   G    D  R  +  Y+ F  I+   +
Sbjct: 67  RELKHKNI--VRYIDRFLNKANQKLYILMEFCDAG----DLSRNIQKCYKMFGKIEEHAI 120

Query: 197 RELGRQLLESVAFMHEL-------RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249
            ++ RQLL ++A+ H L       R++H DLKP+NI L +           +    K  +
Sbjct: 121 VDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTG----------IRHIGKITA 170

Query: 250 YFKNLPKSSAIKLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSV 304
              NL      K+ DFG   +   E   HS  V T +Y +PE++L    +Y    D+W++
Sbjct: 171 QANNLNGRPIAKIGDFGLSKNIGIESMAHS-CVGTPYYWSPELLLHETKSYDDKSDMWAL 229

Query: 305 GCILVELCSGEALFQTHENLEHL 327
           GCI+ ELCSG+  F    N   L
Sbjct: 230 GCIIYELCSGKTPFHKANNFSQL 252

Length = 1021

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 68.3 bits (168), Expect = 5e-13
 Identities = 53/235 (22%), Positives = 94/235 (40%), Gaps = 51/235 (21%)

Query: 95  KILSKMGEGTFGQVVECF----DNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH 148
           ++  K+GEG FG+V +          +  VA+K ++  +  + RE  + E  ++++L  H
Sbjct: 2   ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKL-SH 60

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
                 +G   C Q          + IV E    G  L DFLRK+      +  + ++  
Sbjct: 61  PNIVRLLGV--CTQ-------GEPLYIVTEYMPGG-DLLDFLRKHG-EKLTLKDLLQMAL 109

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKS-SA 259
           Q+ + + ++     +H DL   N L+     VK+ D  F LSR   +  Y++        
Sbjct: 110 QIAKGMEYLESKNFVHRDLAARNCLVTENLVVKISD--FGLSRDIYEDDYYRKRGGGKLP 167

Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           IK                      + APE +    +    D+WS G +L E+ + 
Sbjct: 168 IK----------------------WMAPESLKDGKFTSKSDVWSFGVLLWEIFTL 200

Length = 258

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 67.8 bits (165), Expect = 1e-12
 Identities = 84/343 (24%), Positives = 133/343 (38%), Gaps = 90/343 (26%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDIG--- 151
           L ++G+G+FG+V +  DN  KE+VAIKI+       E   I  EI VL +     I    
Sbjct: 9   LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYY 68

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           G+     + W        I+ E L G S  D L+        I  +    R++L+ + ++
Sbjct: 69  GSYLKGTKLW--------IIMEYLGGGSALDLLKPGPLEETYIATIL---REILKGLDYL 117

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H  R IH D+K  N+LL     VK+ D+    + +            + IK   F  T F
Sbjct: 118 HSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT-----------DTQIKRNTFVGTPF 166

Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
                        + APEVI    +++  D+WS+G   +EL  GE     + +L  +   
Sbjct: 167 -------------WMAPEVIKQSAYDFKADIWSLGITAIELAKGEP---PNSDLHPM--- 207

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
            RVL  +P +                                        P L  Q+   
Sbjct: 208 -RVLFLIPKN--------------------------------------SPPTLEGQY--- 225

Query: 391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLV 433
            +    + ++  L  DP  R  A+E L+H F TR  ++ + L 
Sbjct: 226 -SKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLT 267

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 67.5 bits (165), Expect = 1e-12
 Identities = 67/250 (26%), Positives = 104/250 (41%), Gaps = 57/250 (22%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           +G+GT+G V    D   +  +AIK I    ++Y +    EI +   L   +I     VQ 
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNI-----VQY 70

Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLR-KNSYRSFPIDLVRELGRQLLESVAFMHELRLI 216
                      I  E++ G SL   LR K          +    +Q+LE + ++H+ +++
Sbjct: 71  LGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIV 130

Query: 217 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-------- 268
           H D+K +N+L        V  Y                  S  +K+ DFG++        
Sbjct: 131 HRDIKGDNVL--------VNTY------------------SGVVKISDFGTSKRLAGINP 164

Query: 269 ---TFEHQDHSYVVSTRHYRAPEVI-LGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN 323
              TF          T  Y APEVI  G  G+  P D+WS+GC +VE+ +G+  F   E 
Sbjct: 165 CTETF--------TGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPF--IEL 214

Query: 324 LEHLAMMERV 333
            E  A M +V
Sbjct: 215 GEPQAAMFKV 224

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 67.9 bits (166), Expect = 1e-12
 Identities = 81/332 (24%), Positives = 132/332 (39%), Gaps = 89/332 (26%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA--MIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+        +  A+K++  ++I K +E    M E +VL +  +H       
Sbjct: 3   IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPF----L 58

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V +   F   + +  V + + G  L+  L++   RSFP    R    ++  ++ ++H L 
Sbjct: 59  VGLHYSFQTADKLYFVLDYVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLN 116

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +I+ DLKPENILL S  +V + D+       K+G              I+   TT     
Sbjct: 117 IIYRDLKPENILLDSQGHVVLTDFGL----CKEG--------------IEHSKTT----- 153

Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 334
            S    T  Y APEV+    ++   D W +G +L E+  G   F + +  E   M + +L
Sbjct: 154 -STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE---MYDNIL 209

Query: 335 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 394
                                                    K LRL   I     H    
Sbjct: 210 N----------------------------------------KPLRLKPNISVSARH---- 225

Query: 395 LIDLLQGLLRYDPAERLKAREALR----HPFF 422
              LL+GLL+ D  +RL A++       H FF
Sbjct: 226 ---LLEGLLQKDRTKRLGAKDDFLEIKNHVFF 254

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 67.4 bits (164), Expect = 2e-12
 Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 36/243 (14%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +G+GTFG+V+   +    +  A+KI++    I K   A  +    + +  RH        
Sbjct: 3   LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPF----LT 58

Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
            ++  F  ++ +C V E + G  L+  L +   R F  D  R  G +++ ++ ++H  ++
Sbjct: 59  SLKYSFQTKDRLCFVMEYVNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKI 116

Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           ++ DLK EN++L    ++K+ D+        D +  K                       
Sbjct: 117 VYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTF--------------------- 155

Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMERV 333
                T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME +
Sbjct: 156 ---CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDI 212

Query: 334 LGP 336
             P
Sbjct: 213 KFP 215

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 66.2 bits (161), Expect = 3e-12
 Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 36/231 (15%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDI 150
           +I  K+G G F +V           VA+K V+  +    K R   + EID+L++L   ++
Sbjct: 5   RIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNV 64

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR--KNSYRSFPIDLVRELGRQLLESV 207
                ++    F   N + IV E      L   ++  K   R  P   V +   QL  ++
Sbjct: 65  -----IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSAL 119

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
             MH  R++H D+KP N+ + +   VK+ D          G +F +              
Sbjct: 120 EHMHSRRVMHRDIKPANVFITATGVVKLGDLGL-------GRFFSS-------------K 159

Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
           TT  H     +V T +Y +PE I   G+N+  D+WS+GC+L E+ + ++ F
Sbjct: 160 TTAAHS----LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 66.6 bits (162), Expect = 4e-12
 Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 44/250 (17%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHDIGGTRC 155
           +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH       
Sbjct: 3   LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPF----L 57

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-EL 213
             ++  F   + +C V E   G  L+  L +   R F  D  R  G +++ ++ ++H E 
Sbjct: 58  TALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK 115

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
            +++ DLK EN++L    ++K+ D+       KDG+  K                TF   
Sbjct: 116 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK----------------TF--- 156

Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMME 331
                  T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME
Sbjct: 157 -----CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 211

Query: 332 -----RVLGP 336
                R L P
Sbjct: 212 EIRFPRTLSP 221

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 65.8 bits (160), Expect = 4e-12
 Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 39/224 (17%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR----LARHDIGG 152
           L ++G+G+FG+V +  DN  +++VAIKI+       E A  EI+ +Q+    L++ D   
Sbjct: 9   LERIGKGSFGEVFKGIDNRTQQVVAIKIID-----LEEAEDEIEDIQQEITVLSQCD--S 61

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               +    +     + I+ E L G S  D LR   +  F I     + +++L+ + ++H
Sbjct: 62  PYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQI---ATMLKEILKGLDYLH 118

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
             + IH D+K  N+LL     VK+ D+    + +            + IK   F  T F 
Sbjct: 119 SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT-----------DTQIKRNTFVGTPF- 166

Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
                       + APEVI    ++   D+WS+G   +EL  GE
Sbjct: 167 ------------WMAPEVIQQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 65.6 bits (160), Expect = 5e-12
 Identities = 73/337 (21%), Positives = 127/337 (37%), Gaps = 94/337 (27%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-------EAAMIEIDVLQRLARHDIGG 152
           +G+G FG+V  C      ++ A K    ++K R       + A+ E  +L++++   I  
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACK---KLDKKRLKKRKGEQMALNEKKILEKVSSRFI-- 55

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V +   F+ ++ +C+V   + G  L   +       FP         Q++  +  +H
Sbjct: 56  ---VSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLH 112

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
           + R+++ DLKPEN+LL     V++ D                     A++L   G     
Sbjct: 113 QRRIVYRDLKPENVLLDDHGNVRISDLGL------------------AVELKG-GKKI-- 151

Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-ENLEHLAMM 330
                    T  Y APEV+ G  +++  D +++GC L E+ +G + F+   E +E   + 
Sbjct: 152 ---KGR-AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELK 207

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
            R L              A +Y         PD  +                        
Sbjct: 208 RRTL------------EMAVEY---------PDKFSP----------------------- 223

Query: 391 SAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 422
              +  DL + LL+ DP +RL      A E   HP F
Sbjct: 224 ---EAKDLCEALLQKDPEKRLGCRGGSADEVREHPLF 257

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 66.2 bits (161), Expect = 5e-12
 Identities = 78/336 (23%), Positives = 124/336 (36%), Gaps = 95/336 (28%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMI-EIDVLQRLARHDIGGTRC 155
           +G+GTFG+V+   +       A+KI+R    I K   A  + E  VLQ   RH       
Sbjct: 3   LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA-- 59

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
             ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ ++ ++H   
Sbjct: 60  --LKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 115

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +++ D+K EN++L    ++K+ D+        DG+  K                TF    
Sbjct: 116 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK----------------TF---- 155

Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMMER 332
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 156 ----CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 211

Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           +                                             R P  +        
Sbjct: 212 I---------------------------------------------RFPRTLSPEAK--- 223

Query: 393 GDLIDLLQGLLRYDPAERL-----KAREALRHPFFT 423
                LL GLL+ DP +RL      A+E + H FF 
Sbjct: 224 ----SLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 255

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 65.9 bits (161), Expect = 5e-12
 Identities = 80/336 (23%), Positives = 134/336 (39%), Gaps = 80/336 (23%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+GEG+ G V    D      VA+K +    + R   +    V+ R  +H       V++
Sbjct: 26  KIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHP----NIVEM 81

Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
            + +   + + +V E L G +L D +         I  V      +L++++F+H   +IH
Sbjct: 82  YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATV---CLAVLKALSFLHAQGVIH 138

Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            D+K ++ILL S   VK+ D+ F ++ SK+      +P+  ++                 
Sbjct: 139 RDIKSDSILLTSDGRVKLSDFGFCAQVSKE------VPRRKSL----------------- 175

Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
            V T ++ APEVI  L +    D+WS+G +++E+  GE     + N   L  M+R+    
Sbjct: 176 -VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEP---PYFNEPPLQAMKRI---- 227

Query: 338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 397
                                         RD+         LP  +      S   L  
Sbjct: 228 ------------------------------RDN---------LPPKLKNLHKVSP-RLRS 247

Query: 398 LLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLV 433
            L  +L  DPA+R  A E L HPF       P+ +V
Sbjct: 248 FLDRMLVRDPAQRATAAELLNHPFL-AKAGPPSSIV 282

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 66.2 bits (161), Expect = 5e-12
 Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 32/227 (14%)

Query: 100 MGEGTFGQVV-ECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           +G G+FG+V+   + NE    VAIK        ++  +  +   +++  + I    CV +
Sbjct: 38  LGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNY-INHPFCVNL 96

Query: 159 RNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
              F   +++ +V E  +G   + FLR+N  + FP D+      Q++    ++  L +++
Sbjct: 97  YGSFKDESYLYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVY 154

Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DLKPEN+LL                  KDG           IK+ DFG           
Sbjct: 155 RDLKPENLLL-----------------DKDG----------FIKMTDFGFAKVVDTRTYT 187

Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
           +  T  Y APE++L +G     D W++G  + E+  G   F  +E L
Sbjct: 188 LCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL 234

Length = 340

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 65.5 bits (160), Expect = 6e-12
 Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 44/232 (18%)

Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH 148
           K + ++GEG FG+V  C      +   E VA+K +      ++R     EI++L+ L   
Sbjct: 7   KFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHE 66

Query: 149 DIGGTRCVQIRNWFD--YRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVREL--GRQL 203
           +I     V+ +   +      + ++ E L   SL D+L+++  +   I+L R L    Q+
Sbjct: 67  NI-----VKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQ---INLKRLLLFSSQI 118

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR--SSKDGSYFKNLPKSSAIK 261
            + + ++   R IH DL   NIL+ S + VK+ D+  L++        Y+   P  S I 
Sbjct: 119 CKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFG-LAKVLPEDKDYYYVKEPGESPIF 177

Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                                 + APE +    ++   D+WS G  L EL +
Sbjct: 178 ----------------------WYAPECLRTSKFSSASDVWSFGVTLYELFT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 65.1 bits (159), Expect = 6e-12
 Identities = 72/343 (20%), Positives = 127/343 (37%), Gaps = 94/343 (27%)

Query: 95  KILSKMGEGTFGQV--VECFDNEKKELVAIKIVRSINKYR---EAAMIEIDVLQRLARHD 149
           +++  +G G    V    C  N   E VAIK +  + K +   +    E+  + +    +
Sbjct: 4   ELIEVIGVGATAVVYAAICLPN--NEKVAIKRI-DLEKCQTSVDELRKEVQAMSQCNHPN 60

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR-KNSYRSFPIDLVRELGRQLLESV 207
           +           F   + + +V   L G SL D ++           ++  + +++L+ +
Sbjct: 61  VVKYYTS-----FVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGL 115

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 266
            ++H    IH D+K  NILL                  +DGS          +K+ DFG 
Sbjct: 116 EYLHSNGQIHRDIKAGNILL-----------------GEDGS----------VKIADFGV 148

Query: 267 -STTFEHQDHSY-----VVSTRHYRAPEVI-LGLGWNYPCDLWSVGCILVELCSGEALFQ 319
            ++  +  D +       V T  + APEV+    G+++  D+WS G   +EL +G A + 
Sbjct: 149 SASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYS 208

Query: 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379
                     M+ ++  L +                    D P   T  D  +   K  R
Sbjct: 209 ------KYPPMKVLMLTLQN--------------------DPPSLETGAD-YKKYSKSFR 241

Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                          +I L    L+ DP++R  A E L+H FF
Sbjct: 242 --------------KMISL---CLQKDPSKRPTAEELLKHKFF 267

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 65.6 bits (160), Expect = 8e-12
 Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 47/237 (19%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRC 155
           +G G+FG+V         E  AIK ++       K  +    E  +L  L+   I     
Sbjct: 26  LGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFI----- 80

Query: 156 VQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V +   F   N +  + E  +G  L+  LRK     FP D+ +    +L+ +  ++H   
Sbjct: 81  VNMMCSFQDENRVYFLLEFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSKD 138

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +I+ DLKPEN+LL +  +VKV D+ F  +                              D
Sbjct: 139 IIYRDLKPENLLLDNKGHVKVTDFGFAKKVP----------------------------D 170

Query: 275 HSYVV-STRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG------EALFQTHENL 324
            ++ +  T  Y APEVI   G     D W++G +L E  +G      +  F+ +E +
Sbjct: 171 RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKI 227

Length = 329

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 64.1 bits (156), Expect = 2e-11
 Identities = 80/348 (22%), Positives = 140/348 (40%), Gaps = 98/348 (28%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV-----RSINKYREAAMIEIDVLQRLARHDIG 151
           L ++G G+FG V    D    E+VAIK +     +S  K+++  + E+  LQ+L RH   
Sbjct: 20  LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDI-IKEVRFLQQL-RH--- 74

Query: 152 GTRCVQIRNWFDYRNHIC-IVFEKLGPSLYDFL--RKNSYRSFPIDLVRELGRQLLESVA 208
               ++ +  +  R H   +V E    S  D L   K   +   I  +       L+ +A
Sbjct: 75  -PNTIEYKGCY-LREHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICH---GALQGLA 129

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++H    IH D+K  NILL                 ++ G+          +KL DFGS 
Sbjct: 130 YLHSHERIHRDIKAGNILL-----------------TEPGT----------VKLADFGSA 162

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELCSGEALFQTHENLE 325
           +     +S+ V T ++ APEVIL +    ++   D+WS+G   +EL              
Sbjct: 163 SLVSPANSF-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL-------------- 207

Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
                              A+R+    F             + ++M A++ + +  +  +
Sbjct: 208 -------------------AERKP-PLF-------------NMNAMSALYHIAQNDSPTL 234

Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLV 433
              D S     + +   L+  P +R  + E L+H F  R+ R PT+++
Sbjct: 235 SSNDWSD-YFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE-RPPTVII 280

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 63.4 bits (154), Expect = 3e-11
 Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 39/244 (15%)

Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHD 149
           R +I+ K+GEG+FG++         E   IK   + +   K +EA+  E+ +L ++   +
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPN 60

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     V     F     + IV E   G  L   + +     F  D +     Q+   + 
Sbjct: 61  I-----VTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLK 115

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
            +H+ +++H D+K +NI              FLS++                KL DFG  
Sbjct: 116 HIHDRKILHRDIKSQNI--------------FLSKNGM------------VAKLGDFGIA 149

Query: 269 TFEHQDHSYV---VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
              +         V T +Y +PE+     +N   D+WS+GC+L ELC+ +  F+ + NL 
Sbjct: 150 RQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN-NLH 208

Query: 326 HLAM 329
            L +
Sbjct: 209 QLVL 212

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 63.1 bits (153), Expect = 4e-11
 Identities = 76/328 (23%), Positives = 129/328 (39%), Gaps = 81/328 (24%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+GEG+ G V         +LVA+K +    + R   +    V+ R  +H+      V++
Sbjct: 27  KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE----NVVEM 82

Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
            N +   + + +V E L G +L D +         I  V      +L++++ +H   +IH
Sbjct: 83  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLKALSVLHAQGVIH 139

Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            D+K ++ILL     VK+ D+ F ++ SK+    K+L                       
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL----------------------- 176

Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
            V T ++ APE+I  L +    D+WS+G +++E+  GE  +     L+ + M+   L P 
Sbjct: 177 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP- 234

Query: 338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 397
                                                    +L NL      H     + 
Sbjct: 235 -----------------------------------------KLKNL------HKVSPSLK 247

Query: 398 -LLQGLLRYDPAERLKAREALRHPFFTR 424
             L  LL  DPA+R  A E L+HPF  +
Sbjct: 248 GFLDRLLVRDPAQRATAAELLKHPFLAK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 63.2 bits (153), Expect = 5e-11
 Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 34/234 (14%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHDIGGTRCVQ 157
           K+G+G  G V    D    + VAIK +    + ++  +I EI V++ L   +I     V 
Sbjct: 26  KIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNI-----VN 80

Query: 158 IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLI 216
             + F   + + +V E L G SL D + +       I  V    R+ L+++ F+H  ++I
Sbjct: 81  FLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAV---CRECLQALEFLHANQVI 137

Query: 217 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 276
           H D+K +N+LL     VK+ D+ F ++                         T E    S
Sbjct: 138 HRDIKSDNVLLGMDGSVKLTDFGFCAQ------------------------ITPEQSKRS 173

Query: 277 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
            +V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  L ++
Sbjct: 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 227

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 63.5 bits (154), Expect = 6e-11
 Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 43/261 (16%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI----GG 152
           +  +G G FG+V      + K L A+K +R     ++  ++   V    A  DI      
Sbjct: 6   IKTLGIGAFGEVCLARKVDTKALYAMKTLR-----KKDVLLRNQVAHVKAERDILAEADN 60

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F  ++++  V + + G  +   L +     FP DL R    +L  +V  +H
Sbjct: 61  EWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGI--FPEDLARFYIAELTCAVESVH 118

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLS--RSSKDGSYFK--NLPKSSAIKLIDFGS 267
           ++  IH D+KP+NIL+    ++K+ D+   +  R + D  Y++  +  +  ++   DF +
Sbjct: 119 KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSM---DFSN 175

Query: 268 --------------------TTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSV 304
                                  +HQ    HS +V T +Y APEV+L  G+   CD WSV
Sbjct: 176 EWGDPANCRCGDRLKPLERRAARQHQRCLAHS-LVGTPNYIAPEVLLRTGYTQLCDWWSV 234

Query: 305 GCILVELCSGEALFQTHENLE 325
           G IL E+  G+  F     LE
Sbjct: 235 GVILYEMLVGQPPFLAQTPLE 255

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 62.5 bits (152), Expect = 7e-11
 Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 47/244 (19%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDIGGTR 154
           L  +G G +G V          +VA+KI+       + + I  E+ +L +L +       
Sbjct: 6   LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNI- 64

Query: 155 CVQIRNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               + +  Y     + I+ E   G S+   ++        I ++    R++L ++ ++H
Sbjct: 65  ---TKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVII---REVLVALKYIH 118

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY----KFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
           ++ +IH D+K  NIL+ +   VK+ D+         SSK                     
Sbjct: 119 KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK--------------------R 158

Query: 268 TTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
           +TF        V T ++ APEVI  G  ++   D+WS+G  + E+ +G   +   +    
Sbjct: 159 STF--------VGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD--AF 208

Query: 327 LAMM 330
            AMM
Sbjct: 209 RAMM 212

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 62.4 bits (151), Expect = 7e-11
 Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 35/241 (14%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+GEG+ G V    +    + VA+K +    + R   +    V+ R   H+      V +
Sbjct: 29  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHE----NVVDM 84

Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
            N +   + + +V E L G +L D +         I  V      +L +++++H   +IH
Sbjct: 85  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATV---CLSVLRALSYLHNQGVIH 141

Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            D+K ++ILL S   +K+ D+ F ++ SK+      +PK  ++                 
Sbjct: 142 RDIKSDSILLTSDGRIKLSDFGFCAQVSKE------VPKRKSL----------------- 178

Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
            V T ++ APEVI  L +    D+WS+G +++E+  GE     + N   L  M R+   L
Sbjct: 179 -VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP---PYFNEPPLQAMRRIRDNL 234

Query: 338 P 338
           P
Sbjct: 235 P 235

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 63.0 bits (153), Expect = 7e-11
 Identities = 72/347 (20%), Positives = 126/347 (36%), Gaps = 78/347 (22%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
            ++  +  G+ G+V       + + V +KI +     +   +IE  +LQ +    +    
Sbjct: 69  TVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQ-----KGTTLIEAMLLQNVNHPSV---- 119

Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
            +++++        C+V       LY +L K S R  PID    + +Q+LE + ++H  R
Sbjct: 120 -IRMKDTLVSGAITCMVLPHYSSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQR 177

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +IH D+K ENI +                                + + D G+  F    
Sbjct: 178 IIHRDVKTENIFINDV---------------------------DQVCIGDLGAAQFPVVA 210

Query: 275 HSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL------------CSGEALFQT 320
            ++  +  T    APEV+    +N   D+WS G +L E+             + E   ++
Sbjct: 211 PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKS 270

Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
             +  HL  +   L   P         R  + F   A L+                  R 
Sbjct: 271 CHS--HLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLE------------------RQ 310

Query: 381 PNL---IMQHVD-HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
           P       Q V+    G+   L+  +L +D A R  A E L +P F 
Sbjct: 311 PYTRYPCFQRVNLPIDGEF--LVHKMLTFDAAMRPSAEEILNYPMFA 355

Length = 357

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 62.1 bits (151), Expect = 9e-11
 Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 46/229 (20%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGTRC 155
           LS++GEG  G V +C       + A+K + +         ++  +L+ L           
Sbjct: 6   LSRLGEGAGGSVTKCRLKNTGMIFALKTITT----DPNPDLQKQILRELEINKSCKSPYI 61

Query: 156 VQIRNWF--DYRNHICIVFEKLG----PSLYDFLRKNSYRSFPIDLVRELGR---QLLES 206
           V+    F  +  + I I  E        S+Y  ++K   R       + LG+    +L+ 
Sbjct: 62  VKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGE----KVLGKIAESVLKG 117

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           ++++H  ++IH D+KP NILL                 ++ G           +KL DFG
Sbjct: 118 LSYLHSRKIIHRDIKPSNILL-----------------TRKG----------QVKLCDFG 150

Query: 267 -STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
            S    +        T  Y APE I G  ++   D+WS+G  L+E+   
Sbjct: 151 VSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQN 199

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 62.4 bits (152), Expect = 9e-11
 Identities = 69/336 (20%), Positives = 122/336 (36%), Gaps = 96/336 (28%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS--INKYR--EAAMIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+        EL A+K+++   I +    E  M E  VL    +H       
Sbjct: 3   LGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPF----L 58

Query: 156 VQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            Q+ + F  ++ +  V E +  G  ++   R      F     R    +++  + F+HE 
Sbjct: 59  TQLHSCFQTKDRLFFVMEYVNGGDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLHER 115

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
            +I+ DLK +N+LL S  ++K+ D+       K+G              I  G TT    
Sbjct: 116 GIIYRDLKLDNVLLDSEGHIKIADFGM----CKEG--------------ILGGVTT---- 153

Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMME 331
             S    T  Y APE++    +    D W++G +L E+ +G++ F     + L    + +
Sbjct: 154 --STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED 211

Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
            V    P  +   A                                              
Sbjct: 212 EVR--YPRWLSKEA---------------------------------------------- 223

Query: 392 AGDLIDLLQGLLRYDPAERLKA-----REALRHPFF 422
                 +L+  L  +P +RL       ++   HPFF
Sbjct: 224 ----KSILKSFLTKNPEKRLGCLPTGEQDIKGHPFF 255

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 62.0 bits (150), Expect = 1e-10
 Identities = 73/325 (22%), Positives = 130/325 (40%), Gaps = 79/325 (24%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+GEG+ G V    +      VA+K++    + R   +    V+ R  +H       V++
Sbjct: 28  KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH----QNVVEM 83

Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
              +     + ++ E L G +L D + +       I  V E    +L+++ ++H   +IH
Sbjct: 84  YKSYLVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCE---SVLQALCYLHSQGVIH 140

Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            D+K ++ILL     VK+ D+ F ++ SKD      +PK  ++                 
Sbjct: 141 RDIKSDSILLTLDGRVKLSDFGFCAQISKD------VPKRKSL----------------- 177

Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
            V T ++ APEVI    +    D+WS+G +++E+  GE                      
Sbjct: 178 -VGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEP--------------------- 215

Query: 338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 397
                         YF             S   ++A+ +L   P   +++    +  L D
Sbjct: 216 -------------PYF-------------SDSPVQAMKRLRDSPPPKLKNAHKISPVLRD 249

Query: 398 LLQGLLRYDPAERLKAREALRHPFF 422
            L+ +L  +P ER  A+E L HPF 
Sbjct: 250 FLERMLTREPQERATAQELLDHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 62.5 bits (152), Expect = 1e-10
 Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 21/148 (14%)

Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS--RSSKDG 248
           F  DL R    +L  ++  +H++  IH D+KP+NIL+    ++K+ D+   +  R + D 
Sbjct: 98  FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157

Query: 249 SYFK--NLPKSSAIKLIDFGS-------TTFE------HQD---HSYVVSTRHYRAPEVI 290
            Y++  +  +  +++  +  S          E      HQ    HS +V T +Y APEV+
Sbjct: 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHS-LVGTPNYIAPEVL 216

Query: 291 LGLGWNYPCDLWSVGCILVELCSGEALF 318
           L  G+   CD WSVG IL E+  G+  F
Sbjct: 217 LRTGYTQLCDWWSVGVILYEMLVGQPPF 244

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 61.2 bits (148), Expect = 1e-10
 Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 43/226 (19%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR----LARHDIGG 152
           L K+G+G+FG+V +  DN  +++VAIKI+       E A  EI+ +Q+    L++ D   
Sbjct: 9   LEKIGKGSFGEVFKGIDNRTQKVVAIKIID-----LEEAEDEIEDIQQEITVLSQCD--S 61

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVAF 209
               +    +     + I+ E L G S  D L        P+D   +  + R++L+ + +
Sbjct: 62  PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDY 116

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H  + IH D+K  N+LL     VK+ D+                           G  T
Sbjct: 117 LHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLT 152

Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
                 +  V T  + APEVI    ++   D+WS+G   +EL  GE
Sbjct: 153 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 61.7 bits (149), Expect = 1e-10
 Identities = 64/242 (26%), Positives = 104/242 (42%), Gaps = 46/242 (19%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHDIGGTRC 155
             K+G+G  G V    D    + VAIK +    + ++  +I EI V++          + 
Sbjct: 24  FEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRE--------NKN 75

Query: 156 VQIRNWFDYR---NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             I N+ D     + + +V E L G SL D + +       I  V    R+ L+++ F+H
Sbjct: 76  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALDFLH 132

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---ST 268
             ++IH D+K +NILL                   DGS          +KL DFG     
Sbjct: 133 SNQVIHRDIKSDNILL-----------------GMDGS----------VKLTDFGFCAQI 165

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
           T E    S +V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  L 
Sbjct: 166 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY 225

Query: 329 MM 330
           ++
Sbjct: 226 LI 227

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 61.2 bits (148), Expect = 2e-10
 Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 58/241 (24%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++  +G GT+GQV +    +  +L AIK++       E   +EI++L++ + H      
Sbjct: 19  ELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHH------ 72

Query: 155 CVQIRNWFDY------------RNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGR 201
               RN   Y             + + +V E  G  S+ D ++     +   D +  + R
Sbjct: 73  ----RNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICR 128

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           ++L  +A +H  ++IH D+K +N+LL                            +++ +K
Sbjct: 129 EILRGLAHLHAHKVIHRDIKGQNVLLT---------------------------ENAEVK 161

Query: 262 LIDFG-STTFEHQ--DHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCS 313
           L+DFG S   +      +  + T ++ APEVI         ++Y  D+WS+G   +E+  
Sbjct: 162 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAE 221

Query: 314 G 314
           G
Sbjct: 222 G 222

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 61.3 bits (148), Expect = 2e-10
 Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 46/242 (19%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHDIGGTRC 155
             K+G+G  G V    D    + VAI+ +    + ++  +I EI V++          + 
Sbjct: 25  FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE--------NKN 76

Query: 156 VQIRNWFDYR---NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             I N+ D     + + +V E L G SL D + +       I  V    R+ L+++ F+H
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLH 133

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---ST 268
             ++IH D+K +NILL                   DGS          +KL DFG     
Sbjct: 134 SNQVIHRDIKSDNILL-----------------GMDGS----------VKLTDFGFCAQI 166

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
           T E    S +V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  L 
Sbjct: 167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226

Query: 329 MM 330
           ++
Sbjct: 227 LI 228

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 60.9 bits (148), Expect = 2e-10
 Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 39/225 (17%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKI--VRSINKYREAAMI--EIDVLQRLARHDI 150
           + +  +G GTFG+V    D   +   A+K+  +  + + ++   +  E  VL+ ++   I
Sbjct: 4   ERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFI 63

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                       D +  + ++ E + G  L+ +LR  +   F          +++ ++ +
Sbjct: 64  IRLFW----TEHD-QRFLYMLMEYVPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEY 116

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H   +++ DLKPENILL    ++K+ D+ F                  A KL D   T 
Sbjct: 117 LHSKEIVYRDLKPENILLDKEGHIKLTDFGF------------------AKKLRDRTWT- 157

Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                   +  T  Y APEVI   G N   D W++G ++ E+  G
Sbjct: 158 --------LCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 60.6 bits (147), Expect = 2e-10
 Identities = 61/264 (23%), Positives = 112/264 (42%), Gaps = 48/264 (18%)

Query: 96  ILSKMGEGTFGQVVEC-FDNEKKELVAIKIV-----------RSINKYREAAMIEIDVLQ 143
           +L  +G G FG V +    N  + L+A+K +           R  +K     + E+ +++
Sbjct: 4   VLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIK 63

Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR--KNSYRSFPIDLVRELG 200
              RH       V+    F   + + IV + + G  L +     K   + F  + +  + 
Sbjct: 64  EQLRH----PNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIF 119

Query: 201 RQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            Q++ ++ ++H E R++H DL P NI+L   + V + D+  L++  +  S   +      
Sbjct: 120 VQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFG-LAKQKQPESKLTS------ 172

Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
                             VV T  Y  PE++    +    D+W+ GCIL ++C+ +  F 
Sbjct: 173 ------------------VVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFY 214

Query: 320 THENLEHLAM--MERVLGPLPHHM 341
           +  N+  LA   +E V  PLP  M
Sbjct: 215 S-TNMLSLATKIVEAVYEPLPEGM 237

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 60.7 bits (147), Expect = 3e-10
 Identities = 79/338 (23%), Positives = 128/338 (37%), Gaps = 99/338 (29%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEID--VLQRLARHDIGGTRCVQ 157
           +G+G+FG+V++     K++   I  +++I K    +  E+   + +R     +     V 
Sbjct: 1   IGKGSFGKVMQV---RKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVP 57

Query: 158 IRNWFDYRNHICIVFEKL-GPSLYDFLRK----NSYRSFPIDLVRELGRQLLESVAFMHE 212
           ++  F     + +V   + G  L+  L++    +  R+      R    +LL ++  +H+
Sbjct: 58  LKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRA------RFYTAELLCALENLHK 111

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
             +I+ DLKPENILL         DY                     I L DFG      
Sbjct: 112 FNVIYRDLKPENILL---------DY------------------QGHIALCDFGLCKLNM 144

Query: 273 QDHSYV---VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
           +D         T  Y APE++LG G+    D W++G +L E+ +G               
Sbjct: 145 KDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTG--------------- 189

Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
                  LP       D    + +R                     K+L+ P       D
Sbjct: 190 -------LPPFY----DENVNEMYR---------------------KILQEPLRFPDGFD 217

Query: 390 HSAGDLIDLLQGLLRYDPAERL---KAREALRHPFFTR 424
             A    DLL GLL  DP  RL    A+E   HPFF++
Sbjct: 218 RDAK---DLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQ 252

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 60.8 bits (148), Expect = 3e-10
 Identities = 75/351 (21%), Positives = 135/351 (38%), Gaps = 85/351 (24%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSI---NKYREAAMIEIDVLQRLARHD 149
           K +  +G+G  G+V         +L A+K++  + +   NK +     E ++L  L  H 
Sbjct: 4   KKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVL-TEQEILATL-DHP 61

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                   +   F    ++C+V +   G  L+  L++   +    ++ R    ++L ++ 
Sbjct: 62  F----LPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALE 117

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY----------KFLSRSSKDGSYFKNLPKSS 258
           ++H L +++ DLKPENILL  + ++ + D+            +S++ + GS   ++    
Sbjct: 118 YLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIP 177

Query: 259 ---AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
                +   F S +F        V T  Y APEVI G G     D W++G +L E+  G 
Sbjct: 178 SETFSEEPSFRSNSF--------VGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGT 229

Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
             F                         +   R E +                       
Sbjct: 230 TPF-------------------------KGSNRDETFSN--------------------- 243

Query: 376 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL----KAREALRHPFF 422
            +L+           S+    DL++ LL  DP++RL     A E  +HPFF
Sbjct: 244 -ILKKEVTFPGSPPVSS-SARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFF 292

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 60.3 bits (146), Expect = 4e-10
 Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 44/224 (19%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G  G V    D    + VAIK +    + ++  +I   ++ R  +H         I
Sbjct: 26  KIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHP-------NI 78

Query: 159 RNWFD---YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
            N+ D     + + +V E L G SL D + +       I  V    R+ L+++ F+H  +
Sbjct: 79  VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQ 135

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFE 271
           +IH D+K +NILL                   DGS          +KL DFG     T E
Sbjct: 136 VIHRDIKSDNILL-----------------GMDGS----------VKLTDFGFCAQITPE 168

Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
               S +V T ++ APEV+    +    D+WS+G + +E+  GE
Sbjct: 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 60.7 bits (147), Expect = 4e-10
 Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 34/225 (15%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +G+GTFGQV +    + + + A+K++  + I   +E A    E ++L R    +      
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDE--SPFI 58

Query: 156 VQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V ++  F   + + +V +   G  L+  L+K     F  D  +    +L+ ++  +H+  
Sbjct: 59  VGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKYD 116

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +++ DLKPENILL +  ++ + D+  LS++        NL  +         + TF    
Sbjct: 117 IVYRDLKPENILLDATGHIALCDFG-LSKA--------NLTDNKT-------TNTF---- 156

Query: 275 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF 318
                 T  Y APEV+L   G+    D WS+G ++ E+C G + F
Sbjct: 157 ----CGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPF 197

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 60.8 bits (147), Expect = 5e-10
 Identities = 82/352 (23%), Positives = 134/352 (38%), Gaps = 79/352 (22%)

Query: 84  FAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQ 143
           F+I E  TP          G  G    C DN+  E V IK  +     R     E  +L+
Sbjct: 94  FSILETFTP----------GAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILR 138

Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
            +    I     +Q++  F Y    C++  +    LY +L   + R+  I  +  + R +
Sbjct: 139 AINHPSI-----IQLKGTFTYNKFTCLILPRYKTDLYCYL--AAKRNIAICDILAIERSV 191

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
           L ++ ++HE R+IH D+K ENI                         F N P    + L 
Sbjct: 192 LRAIQYLHENRIIHRDIKAENI-------------------------FINHPGD--VCLG 224

Query: 264 DFGSTTFE---HQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE-ALF 318
           DFG+  F    + +  Y    T    APE++    +    D+WS G +L E+ +   +LF
Sbjct: 225 DFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLF 284

Query: 319 QTH------ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-SM 371
           +        ++   + ++ R  G  P+   I A    ++ +   A+       +SR    
Sbjct: 285 EKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAK------KSSRKPGS 338

Query: 372 RAVW-KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           R +W  L  LP            DL  L+  +L +D   R  A   L    F
Sbjct: 339 RPLWTNLYELPI-----------DLEYLICKMLAFDAHHRPSAEALLDFAAF 379

Length = 391

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 60.0 bits (145), Expect = 6e-10
 Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 37/245 (15%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDI----G 151
           L  +G G FG+V      +   + A+KI+R      +A M+E + +  + A  DI     
Sbjct: 6   LKVIGRGAFGEVRLVQKKDTGHIYAMKILR------KADMLEKEQVAHIRAERDILVEAD 59

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES---- 206
           G   V++   F  + ++ ++ E L G  +   L K        D + E   Q   +    
Sbjct: 60  GAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKK-------DTLSEEATQFYIAETVL 112

Query: 207 -VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS--RSSKDGSYFKNLPKSSAIKLI 263
            +  +H+L  IH D+KP+N+LL +  +VK+ D+   +  + +    +++NL  +      
Sbjct: 113 AIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDF- 171

Query: 264 DFGSTTFEHQDHSY----------VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
            F +   + +  ++           V T  Y APEV +  G+N  CD WS+G I+ E+  
Sbjct: 172 SFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI 231

Query: 314 GEALF 318
           G   F
Sbjct: 232 GYPPF 236

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 58.5 bits (141), Expect = 1e-09
 Identities = 62/240 (25%), Positives = 104/240 (43%), Gaps = 32/240 (13%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ K+G G FG+V     N   + VA+K ++      E+ + E  ++++L RHD    +
Sbjct: 9   QLIKKLGNGQFGEVWMGTWNGNTK-VAVKTLKPGTMSPESFLEEAQIMKKL-RHD----K 62

Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+    R+  +  + ++  Q+   +A++  +
Sbjct: 63  LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM 121

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+      K+ D+  L+R  +D  Y         IK            
Sbjct: 122 NYIHRDLRSANILVGDGLVCKIADFG-LARLIEDNEYTARQGAKFPIK------------ 168

Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 169 ----------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER 218

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 59.5 bits (144), Expect = 1e-09
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 39/241 (16%)

Query: 100 MGEGTFGQV--VECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQRLARHDIGGT 153
           +G+G FG+V  V+  D  K  + A+K +     +++  +     E DVL   A  D    
Sbjct: 9   IGKGAFGEVRLVQKKDTGK--IYAMKTLLKSEMFKKDQLAHVKAERDVL---AESD--SP 61

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             V +   F    ++ ++ E L G  L   L K  Y +F  D+ R    + + ++  +H+
Sbjct: 62  WVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAVHK 119

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK--DGSYFKNLPKSSAIK--------- 261
           L  IH D+KP+NIL+    ++K+ D+   +   K  D +Y++ L +  + K         
Sbjct: 120 LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSV 179

Query: 262 LIDFGSTTFEHQDH-----------SY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 309
            +D  + T   +D            +Y  V T  Y APE+ L  G+   CD WS+G I+ 
Sbjct: 180 AVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMF 239

Query: 310 E 310
           E
Sbjct: 240 E 240

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 59.2 bits (143), Expect = 1e-09
 Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 38/245 (15%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS---IN-KYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+        +  A+K+++    +N K ++  M E +VL +  +H       
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPF----L 58

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V +   F     +  V + + G  L+  L++   RSFP    R    ++  ++ ++H + 
Sbjct: 59  VGLHYSFQTTEKLYFVLDFVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSIN 116

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +++ DLKPENILL S  +V + D+       K+G           I   D  +TTF    
Sbjct: 117 IVYRDLKPENILLDSQGHVVLTDFGL----CKEG-----------IAQSD-TTTTF---- 156

Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF---QTHENLEHLAMME 331
                 T  Y APEVI    ++   D W +G +L E+  G   F      E  +++    
Sbjct: 157 ----CGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP 212

Query: 332 RVLGP 336
            VL P
Sbjct: 213 LVLRP 217

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 59.0 bits (143), Expect = 1e-09
 Identities = 70/282 (24%), Positives = 116/282 (41%), Gaps = 70/282 (24%)

Query: 97  LSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDI 150
           L  +G+G+FG+V    +    +  +L A+K+++      + R    +E D+L        
Sbjct: 1   LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDIL-------- 52

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLY---DFLRKNSYRSFPIDLVRELGRQLL--- 204
                 ++ + F  + H    F+  G  LY   DFLR         DL   L ++++   
Sbjct: 53  -----AEVNHPFIVKLHY--AFQTEG-KLYLILDFLRGG-------DLFTRLSKEVMFTE 97

Query: 205 ESVAF-----------MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
           E V F           +H L +I+ DLKPENILL    ++K+ D+  LS+ S D      
Sbjct: 98  EDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG-LSKESIDH----- 151

Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                            E + +S+   T  Y APEV+   G     D WS G ++ E+ +
Sbjct: 152 -----------------EKKAYSFC-GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 193

Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 355
           G   FQ  +  E + M+ +    +P  +   A       F+R
Sbjct: 194 GSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFKR 235

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 58.2 bits (140), Expect = 1e-09
 Identities = 51/231 (22%), Positives = 106/231 (45%), Gaps = 38/231 (16%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGGT 153
           +++  +G GT+GQV +    +  +L AIK++       E    EI++L++ + H +I   
Sbjct: 9   ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATY 68

Query: 154 RCVQIR-NWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               I+ N     + + +V E  G  S+ D ++     +   + +  + R++L  ++ +H
Sbjct: 69  YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 128

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
           + ++IH D+K +N+LL                            +++ +KL+DFG +   
Sbjct: 129 QHKVIHRDIKGQNVLLT---------------------------ENAEVKLVDFGVSAQL 161

Query: 272 HQD---HSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSG 314
            +     +  + T ++ APEVI         +++  DLWS+G   +E+  G
Sbjct: 162 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 212

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 58.1 bits (140), Expect = 2e-09
 Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 37/240 (15%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +I+  +G G FG+V        + + A+KI   +NK+      E     R  R+ +    
Sbjct: 4   EIIKVIGRGAFGEVAVVKMKHTERIYAMKI---LNKWEMLKRAETACF-REERNVLVNGD 59

Query: 155 CVQIRNW---FDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           C  I      F   N++ +V +  +G  L   L K   R  P D+ R    +++ ++  +
Sbjct: 60  CQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDR-LPEDMARFYIAEMVLAIHSI 118

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H+L  +H D+KP+N+LL    ++++ D+    + ++DG+                     
Sbjct: 119 HQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV-------------------- 158

Query: 271 EHQDHSYVVSTRHYRAPEVIL----GLGWNYP-CDLWSVGCILVELCSGEALFQTHENLE 325
                S  V T  Y +PE++     G+G   P CD WS+G  + E+  GE  F     +E
Sbjct: 159 ---QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 215

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 57.6 bits (139), Expect = 3e-09
 Identities = 69/286 (24%), Positives = 119/286 (41%), Gaps = 62/286 (21%)

Query: 95  KILSKMGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARH 148
           K +  +GEG FG+V + C+D   +   E+VA+K ++     +       EI++L+ L   
Sbjct: 7   KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHE 66

Query: 149 DI---------GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
           +I          G + +Q+           + +  LG SL D+L K+      ++L + L
Sbjct: 67  NIVKYKGCCSEQGGKGLQL----------IMEYVPLG-SLRDYLPKHK-----LNLAQLL 110

Query: 200 --GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 257
              +Q+ E +A++H    IH DL   N+LL +   VK+ D+  L+++  +G  +  + + 
Sbjct: 111 LFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE- 168

Query: 258 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 317
                 D  S  F             + A E +    ++Y  D+WS G  L EL     L
Sbjct: 169 ------DGDSPVF-------------WYAVECLKENKFSYASDVWSFGVTLYEL-----L 204

Query: 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 363
                        E ++GP    M +    R  +   RG RL  P 
Sbjct: 205 THCDSKQSPPKKFEEMIGPKQGQMTV---VRLIELLERGMRLPCPK 247

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 57.5 bits (139), Expect = 3e-09
 Identities = 51/227 (22%), Positives = 100/227 (44%), Gaps = 35/227 (15%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDIGG 152
           + +S +G G  G V +        ++A K+V   + +  R+  + E+ ++     H+   
Sbjct: 8   ETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIM-----HECRS 62

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH- 211
              V     F   N+IC+  E +     D + K      P++++ ++   ++E + +++ 
Sbjct: 63  PYIVSFYGAFLNENNICMCMEFMDCGSLDRIYK-KGGPIPVEILGKIAVAVVEGLTYLYN 121

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
             R++H D+KP NIL+ S   +K+ D+                    + +LI+  + TF 
Sbjct: 122 VHRIMHRDIKPSNILVNSRGQIKLCDF------------------GVSGELINSIADTF- 162

Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
                  V T  Y +PE I G  +    D+WS+G  ++EL  G+  F
Sbjct: 163 -------VGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPF 202

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 58.1 bits (140), Expect = 3e-09
 Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 25/152 (16%)

Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS--RSSKDG 248
           FP  L R    +L  ++  +H++  IH D+KP+NIL+    ++K+ D+   +  R + + 
Sbjct: 98  FPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157

Query: 249 SYFK--NLPKSSAIKLIDF-----------------GSTTFEHQD---HSYVVSTRHYRA 286
            Y++  +  +  +++  D                     T +HQ    HS +V T +Y A
Sbjct: 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHS-LVGTPNYIA 216

Query: 287 PEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
           PEV+L  G+   CD WSVG IL E+  G+  F
Sbjct: 217 PEVLLRKGYTQLCDWWSVGVILFEMLVGQPPF 248

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 57.5 bits (139), Expect = 4e-09
 Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 42/235 (17%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR- 154
           + S +G G FG+V    +    ++ A+K+++     +   + +  V       DI     
Sbjct: 5   VKSLVGRGHFGEVQVVREKATGDIYAMKVMK-----KSVLLAQETVSFFEEERDILSISN 59

Query: 155 ---CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRS-FPIDLVRELGRQLLESVAF 209
                Q++  F  ++++ +V E   G  L   L  N Y   F  D+ +    +L+ ++  
Sbjct: 60  SPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLL--NRYEDQFDEDMAQFYLAELVLAIHS 117

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H++  +H D+KPEN+L+    ++K+ D+   +R + +      LP              
Sbjct: 118 VHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLP-------------- 163

Query: 270 FEHQDHSYVVSTRHYRAPEVILGLG------WNYPCDLWSVGCILVELCSGEALF 318
                    V T  Y APEV+  +       +   CD WS+G I  E+  G + F
Sbjct: 164 ---------VGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPF 209

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 57.6 bits (139), Expect = 4e-09
 Identities = 65/270 (24%), Positives = 108/270 (40%), Gaps = 53/270 (19%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+      K E  A+K ++     I+   E  M+E  VL     +       
Sbjct: 3   LGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPF----L 58

Query: 156 VQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRE--LGRQLLESVAFMH 211
             +   F  + H+  V E L  G  ++    K  +     DL R      +++  + F+H
Sbjct: 59  THLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRF-----DLYRATFYAAEIVCGLQFLH 113

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---ST 268
              +I+ DLK +N++L                  +DG           IK+ DFG     
Sbjct: 114 SKGIIYRDLKLDNVML-----------------DRDGH----------IKIADFGMCKEN 146

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
            F     S    T  Y APE++ GL + +  D WS G +L E+  G++ F   +  E   
Sbjct: 147 VFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE--- 203

Query: 329 MMERVLGPLPHH---MVIRADRRAEKYFRR 355
           + E +    PH+   +   +    EK F R
Sbjct: 204 LFESIRVDTPHYPRWITKESKDILEKLFER 233

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 56.6 bits (137), Expect = 5e-09
 Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 36/221 (16%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K+  K+G G FG+V     N   + VA+K ++      EA + E  ++++L RHD    +
Sbjct: 9   KLERKLGAGQFGEVWMGTWNGTTK-VAVKTLKPGTMSPEAFLQEAQIMKKL-RHD----K 62

Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+    +   +  + ++  Q+ E +A++   
Sbjct: 63  LVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR 122

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA---IKLIDFGSTTF 270
             IH DL   NIL+      K+ D+  L+R  +D  Y     +  A   IK         
Sbjct: 123 NYIHRDLAARNILVGENLVCKIADFG-LARLIEDDEY---TAREGAKFPIK--------- 169

Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                        + APE      +    D+WS G +L E+
Sbjct: 170 -------------WTAPEAANYGRFTIKSDVWSFGILLTEI 197

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 57.4 bits (138), Expect = 5e-09
 Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 37/245 (15%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDI----G 151
           L  +G G FG+V      +   + A+KI+R      +A M+E + +  + A  DI     
Sbjct: 6   LKVIGRGAFGEVRLVQKKDTGHVYAMKILR------KADMLEKEQVGHIRAERDILVEAD 59

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQL-----LE 205
               V++   F  + ++ ++ E L G  +   L K        D + E   Q      + 
Sbjct: 60  SLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKK-------DTLTEEETQFYIAETVL 112

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS--RSSKDGSYFKNLPKSSAIKLI 263
           ++  +H+L  IH D+KP+N+LL S  +VK+ D+   +  + +    +++NL  S      
Sbjct: 113 AIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFT 172

Query: 264 DFGSTTFEHQDHSY----------VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
            F +   + +  ++           V T  Y APEV +  G+N  CD WS+G I+ E+  
Sbjct: 173 -FQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI 231

Query: 314 GEALF 318
           G   F
Sbjct: 232 GYPPF 236

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 55.6 bits (135), Expect = 9e-09
 Identities = 59/238 (24%), Positives = 95/238 (39%), Gaps = 60/238 (25%)

Query: 99  KMGEGTFGQVVECF---DNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHD---- 149
           K+GEG FG+V +      + K   VA+K ++     + R+  + E  V+++L  H     
Sbjct: 2   KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL-GHPNVVR 60

Query: 150 -IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
            +G   C +          + +V E  + G  L D+LRK+    FP      L  + L S
Sbjct: 61  LLGV--CTE-------EEPLYLVLEYMEGG-DLLDYLRKSR-PVFPSPEKSTLSLKDLLS 109

Query: 207 VA--------FMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKS 257
            A        ++   + +H DL   N L+     VK+ D  F LSR   D  Y++   K 
Sbjct: 110 FAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISD--FGLSRDVYDDDYYR---KK 164

Query: 258 SAIKLIDFGSTTFEHQDHSYVVSTRHYR--APEVILGLGWNYPCDLWSVGCILVELCS 313
           +  KL                      R  APE +    +    D+WS G +L E+ +
Sbjct: 165 TGGKL--------------------PIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFT 202

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 56.2 bits (136), Expect = 9e-09
 Identities = 67/265 (25%), Positives = 107/265 (40%), Gaps = 57/265 (21%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           + L ++G GT GQV +    +   ++A+K + R+ NK  E   I +D+   L  HD    
Sbjct: 18  ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE-ENKRILMDLDVVLKSHD---- 72

Query: 154 RC---VQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
            C   V+   +F   + + I  E +   L D L K      P D+   LG+  +  V  +
Sbjct: 73  -CPYIVKCYGYFITDSDVFICMELMSTCL-DKLLKRIQGPIPEDI---LGKMTVAIVKAL 127

Query: 211 HELR----LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           H L+    +IH D+KP NILL                             S  +KL DFG
Sbjct: 128 HYLKEKHGVIHRDVKPSNILL---------------------------DASGNVKLCDFG 160

Query: 267 STTF--EHQDHSYVVSTRHYRAPEVI----LGLGWNYPCDLWSVGCILVELCSGEALFQT 320
            +    + +  +       Y APE I        ++   D+WS+G  LVEL +G+  F  
Sbjct: 161 ISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ--FPY 218

Query: 321 HENLEHLAMMERVLGP----LPHHM 341
                   ++ ++L      LP + 
Sbjct: 219 KNCKTEFEVLTKILQEEPPSLPPNE 243

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 55.5 bits (134), Expect = 1e-08
 Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 33/241 (13%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++L K+G G FG+V E   N     VA+K ++      +  + E  ++++L RH     +
Sbjct: 9   QLLRKLGAGQFGEVWEGLWNNTTP-VAVKTLKPGTMDPKDFLAEAQIMKKL-RH----PK 62

Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +Q+         I IV E  K G SL ++L+  + R+  +  + ++  Q+   +A++  
Sbjct: 63  LIQLYAVCTLEEPIYIVTELMKYG-SLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA 121

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
              IH DL   N+L+      KV D+  L+R  K+  Y         IK           
Sbjct: 122 QNYIHRDLAARNVLVGENNICKVADFG-LARVIKEDIYEAREGAKFPIK----------- 169

Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMME 331
                      + APE  L   ++   D+WS G +L E+ + G   +    N E L  ++
Sbjct: 170 -----------WTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVD 218

Query: 332 R 332
           +
Sbjct: 219 Q 219

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 55.2 bits (133), Expect = 1e-08
 Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 32/240 (13%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ K+G G FG+V   + N   + VAIK ++  +   EA + E +++++L +H     R
Sbjct: 9   KLVKKLGAGQFGEVWMGYYNGHTK-VAIKSLKQGSMSPEAFLAEANLMKQL-QHP----R 62

Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V++      +  I I+ E +   SL DFL+        I+ + ++  Q+ E +AF+   
Sbjct: 63  LVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK 121

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+      K+ D+  L+R  +D  Y         IK            
Sbjct: 122 NYIHRDLRAANILVSETLCCKIADFG-LARLIEDNEYTAREGAKFPIK------------ 168

Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 169 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLER 218

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 55.3 bits (133), Expect = 1e-08
 Identities = 50/231 (21%), Positives = 100/231 (43%), Gaps = 41/231 (17%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-------EAAMIEIDVLQRLARHDIGG 152
           +G+G FG+V         ++ A K    ++K R       + A++E ++L+++    I  
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACK---KLDKKRLKKKSGEKMALLEKEILEKVNSPFI-- 55

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V +   F+ + H+C+V   + G  L   +     R   ++ V     Q+   +  +H
Sbjct: 56  ---VNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLH 112

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
            + +++ D+KPEN+LL      ++ D                     A++L D  + T  
Sbjct: 113 SMDIVYRDMKPENVLLDDQGNCRLSDLGL------------------AVELKDGKTITQR 154

Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
                    T  Y APE++    ++YP D +++GC + E+ +G   F+ H+
Sbjct: 155 -------AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHK 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 55.1 bits (132), Expect = 2e-08
 Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 34/237 (14%)

Query: 99  KMGEGTFGQV-VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQ 157
           K+G+G FG+V +  ++   K  VAIK ++      EA + E  ++++L RHD    + V 
Sbjct: 13  KLGQGCFGEVWMGTWNGTTK--VAIKTLKPGTMMPEAFLQEAQIMKKL-RHD----KLVP 65

Query: 158 IRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLI 216
           +         I IV E +G  SL DFL++   +   +  + ++  Q+ + +A++  +  I
Sbjct: 66  LYAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYI 124

Query: 217 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 276
           H DL+  NIL+      K+ D+  L+R  +D  Y         IK               
Sbjct: 125 HRDLRAANILVGDNLVCKIADFG-LARLIEDNEYTARQGAKFPIK--------------- 168

Query: 277 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                  + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 169 -------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVER 218

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 55.5 bits (133), Expect = 2e-08
 Identities = 60/242 (24%), Positives = 105/242 (43%), Gaps = 41/242 (16%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQRLARHDI 150
           +IL  +G G FG+V         ++ A+KI+      + A       E DVL        
Sbjct: 4   EILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN------ 57

Query: 151 GGTRCVQIRNW-FDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           G  + +   ++ F   N++ +V +  +G  L   L K   R  P D+ R    +++ ++ 
Sbjct: 58  GDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDR-LPEDMARFYLAEMVIAID 116

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
            +H+L  +H D+KP+NIL+    ++++ D+                   S +KL++ G+ 
Sbjct: 117 SVHQLHYVHRDIKPDNILMDMNGHIRLADF------------------GSCLKLMEDGTV 158

Query: 269 TFEHQDHSYVVSTRHYRAPEVIL----GLGWNYP-CDLWSVGCILVELCSGEALFQTHEN 323
                  S  V T  Y +PE++     G G   P CD WS+G  + E+  GE  F     
Sbjct: 159 -----QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL 213

Query: 324 LE 325
           +E
Sbjct: 214 VE 215

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 55.4 bits (133), Expect = 2e-08
 Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 37/232 (15%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V         +  AIK ++     ++   E  M+E  VL     H       
Sbjct: 3   LGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF----L 58

Query: 156 VQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE--LGRQLLESVAFMHEL 213
             +   F  + ++  V E L      F  ++ ++    DL R      +++  + F+H  
Sbjct: 59  THLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHK---FDLPRATFYAAEIICGLQFLHSK 115

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
            +++ DLK +NILL +  ++K+ D+     +                 L D  + TF   
Sbjct: 116 GIVYRDLKLDNILLDTDGHIKIADFGMCKEN----------------MLGDAKTCTF--- 156

Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
                  T  Y APE++LG  +N   D WS G +L E+  G++ F  H+  E
Sbjct: 157 -----CGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE 203

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 17/158 (10%)

Query: 99  KMGEGTFGQVVEC-FDNEKKEL--VAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT 153
           K+G+G+FG V    +     ++  VA+K ++S       +  + E  ++  L   ++   
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENL--- 58

Query: 154 RCVQIRNWFDYRNH-ICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               IR +     H + +V E L P  SL D LRK++   F I  + +   Q+   + ++
Sbjct: 59  ----IRLYGVVLTHPLMMVTE-LAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYL 113

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
              R IH DL   NILL S + VK+ D+  L R+    
Sbjct: 114 ESKRFIHRDLAARNILLASDDKVKIGDFG-LMRALPQN 150

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 54.6 bits (131), Expect = 2e-08
 Identities = 61/245 (24%), Positives = 106/245 (43%), Gaps = 44/245 (17%)

Query: 99  KMGEGTFGQVVECFDNEKK--ELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGT 153
           ++G G FG V +     KK  + VA+KI+++ N     ++  + E +V+Q+L    I   
Sbjct: 2   ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYI--V 59

Query: 154 RCVQI---RNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           R + I    +W        +V E  +LGP L  FL+KN  +      + EL  Q+   + 
Sbjct: 60  RMIGICEAESWM-------LVMELAELGP-LNKFLQKN--KHVTEKNITELVHQVSMGMK 109

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++ E   +H DL   N+LLV+  Y K+ D+        D +Y+K                
Sbjct: 110 YLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA--------------- 154

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL 327
               + H        + APE +    ++   D+WS G ++ E  S G+  ++  +  E  
Sbjct: 155 ----KTHGK--WPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVT 208

Query: 328 AMMER 332
            M+E 
Sbjct: 209 QMIES 213

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 54.9 bits (132), Expect = 2e-08
 Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 47/248 (18%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-------EAAMIEIDVLQRLARHDIGG 152
           +G+G FG+V  C      +L A K    +NK R       E AM+E  +L ++    I  
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACK---KLNKKRLKKRKGYEGAMVEKRILAKVHSRFI-- 55

Query: 153 TRCVQIRNWFDYRNHICIVFE-----KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
              V +   F  +  +C+V        L   +Y+   +N    FP         Q++  +
Sbjct: 56  ---VSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENP--GFPEPRACFYTAQIISGL 110

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
             +H+ R+I+ DLKPEN+LL +   V++ D                     A++L D  S
Sbjct: 111 EHLHQRRIIYRDLKPENVLLDNDGNVRISDLGL------------------AVELKDGQS 152

Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-ENLEH 326
            T  +        T  + APE++ G  +++  D +++G  L E+ +    F+   E +E+
Sbjct: 153 KTKGY------AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN 206

Query: 327 LAMMERVL 334
             + +R+L
Sbjct: 207 KELKQRIL 214

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 54.7 bits (131), Expect = 3e-08
 Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 43/223 (19%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV-----RSINKYREAAMIEIDVLQRLARHDIG 151
           L ++G G+FG V    D    E+VAIK +     +S  K+++  + E+  LQR+   +  
Sbjct: 30  LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDI-IKEVKFLQRIKHPN-- 86

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               ++ +  +   +   +V E    S  D L  +      +++   +    L+ +A++H
Sbjct: 87  ---SIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AITHGALQGLAYLH 142

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
              +IH D+K  NILL                            +   +KL DFGS +  
Sbjct: 143 SHNMIHRDIKAGNILLT---------------------------EPGQVKLADFGSASIA 175

Query: 272 HQDHSYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVEL 311
              +S+ V T ++ APEVIL +    ++   D+WS+G   +EL
Sbjct: 176 SPANSF-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 217

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 54.2 bits (130), Expect = 3e-08
 Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 42/238 (17%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
            ++ ++G G FG V   +  EK++ VAIK +R      E  + E  V+ +L+       +
Sbjct: 7   TLVQEIGSGQFGLVWLGYWLEKRK-VAIKTIREGAMSEEDFIEEAQVMMKLSH-----PK 60

Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+      R+ IC+VFE +    L D+LR      F  + +  +   + E +A++   
Sbjct: 61  LVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESS 119

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
            +IH DL   N L                           + ++  +K+ DFG T F   
Sbjct: 120 NVIHRDLAARNCL---------------------------VGENQVVKVSDFGMTRFVLD 152

Query: 274 DHSYVVSTR-----HYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325
           D  Y  ST       + +PEV     ++   D+WS G ++ E+ S G+  ++   N E
Sbjct: 153 DQ-YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE 209

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 54.2 bits (130), Expect = 3e-08
 Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 51/239 (21%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +I+  +G+GT+G+V +  + +     A+KI+  I+   E    E ++L+ L+ H      
Sbjct: 21  EIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDH----PN 76

Query: 155 CVQIRNWF---DYRN--HICIVFEKL-GPSLYD----FLRKNSYRSFPIDLVRELGRQLL 204
            V+    +   D +N   + +V E   G S+ D    FL++      PI  +  +  + L
Sbjct: 77  VVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPI--IAYILHEAL 134

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
             +  +H  + IH D+K  NILL +                              +KL+D
Sbjct: 135 MGLQHLHVNKTIHRDVKGNNILLTT---------------------------EGGVKLVD 167

Query: 265 FGST---TFEHQDHSYVVSTRHYRAPEVI-----LGLGWNYPCDLWSVGCILVELCSGE 315
           FG +   T      +  V T  + APEVI     L   ++  CD+WS+G   +EL  G+
Sbjct: 168 FGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGD 226

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 54.3 bits (130), Expect = 3e-08
 Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 32/240 (13%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K+  K+G G FG+V     N K   VA+K ++  +   EA + E +V++ L +HD    +
Sbjct: 9   KLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHD----K 62

Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V++ +    +  I I+ E +   SL DFL+ +     P+  + +   Q+ E +AF+ + 
Sbjct: 63  LVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 121

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+ ++   K+ D+  L+R  +D  Y         IK            
Sbjct: 122 NYIHRDLRAANILVSASLVCKIADFG-LARVIEDNEYTAREGAKFPIK------------ 168

Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L+E+ + G   +    N E +  +ER
Sbjct: 169 ----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 218

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 54.3 bits (130), Expect = 4e-08
 Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 41/222 (18%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSINKYREAAMIEIDVLQRLARHDIGG 152
           L ++G G+FG V    D    E+VAIK +    +  N+  +  + E+  LQ+L RH    
Sbjct: 20  LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RH---- 74

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              +Q R  +   +   +V E    S  D L  +      +++   +    L+ +A++H 
Sbjct: 75  PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHS 133

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
             +IH D+K  NILL                            +   +KL DFGS +   
Sbjct: 134 HNMIHRDVKAGNILLS---------------------------EPGLVKLGDFGSASIMA 166

Query: 273 QDHSYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVEL 311
             + + V T ++ APEVIL +    ++   D+WS+G   +EL
Sbjct: 167 PANXF-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 54.0 bits (130), Expect = 4e-08
 Identities = 58/226 (25%), Positives = 90/226 (39%), Gaps = 39/226 (17%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+        E  AIK ++      +   E  M+E  VL     H       
Sbjct: 3   LGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPF----L 58

Query: 156 VQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +   F  + H+  V E L      F  ++S R F     R    +++  + F+H+  +
Sbjct: 59  THLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGR-FDEARARFYAAEIICGLQFLHKKGI 117

Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE---H 272
           I+ DLK +N+LL                  KDG           IK+ DFG         
Sbjct: 118 IYRDLKLDNVLL-----------------DKDGH----------IKIADFGMCKENMNGE 150

Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
              S    T  Y APE++ G  +N   D WS G +L E+  G++ F
Sbjct: 151 GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 53.9 bits (129), Expect = 4e-08
 Identities = 63/236 (26%), Positives = 100/236 (42%), Gaps = 32/236 (13%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 13  KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 66

Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 67  YAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 125

Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D  Y         IK                
Sbjct: 126 RDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK---------------- 168

Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 169 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 218

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 54.0 bits (130), Expect = 4e-08
 Identities = 62/282 (21%), Positives = 106/282 (37%), Gaps = 84/282 (29%)

Query: 166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPE 223
             I I  E + G SL   L+K      P +++ ++   +L  + ++ E  +++H D+KP 
Sbjct: 72  GEISICMEHMDGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPS 129

Query: 224 NILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRH 283
           NIL+ S   +K+ D+                    + +LID  + +F        V TR 
Sbjct: 130 NILVNSRGEIKLCDF------------------GVSGQLIDSMANSF--------VGTRS 163

Query: 284 YRAPEVILGLGWNYPCDLWSVGCILVELCSG------------EALFQTHENLEHLAMME 331
           Y +PE + G  +    D+WS+G  LVE+  G            EA+F    +        
Sbjct: 164 YMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESH 223

Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL---------RLPN 382
           R +   P                            S   M A+++LL         +LP+
Sbjct: 224 RPVSGHPP--------------------------DSPRPM-AIFELLDYIVNEPPPKLPS 256

Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
                    + +  D +   L+ +P ER   +E  +HPF  R
Sbjct: 257 ------GAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR 292

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 53.7 bits (130), Expect = 4e-08
 Identities = 53/249 (21%), Positives = 86/249 (34%), Gaps = 78/249 (31%)

Query: 176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 235
              L+D L+K          V+++ RQL+E++  +H+  +IH D+K EN+L         
Sbjct: 93  DGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVL--------- 141

Query: 236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW 295
                         Y +   +   I L D+G          Y   T  Y +PE I G  +
Sbjct: 142 --------------YDRAKDR---IYLCDYGLCKIIGTPSCY-DGTLDYFSPEKIKGHNY 183

Query: 296 NYPCDLWSVGCILVELCSGEALFQTHENLE-HLAMMERVLGPLPHHMVIRADRRAEKYFR 354
           +   D W+VG +  EL +G+  F+  E+ E  L  + +                      
Sbjct: 184 DVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLK---------------------- 221

Query: 355 RGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL-KA 413
              R           S  A                       D +Q +L+Y+   RL   
Sbjct: 222 ---RQQKKLPFIKNVSKNAN----------------------DFVQSMLKYNINYRLTNY 256

Query: 414 REALRHPFF 422
            E ++HPF 
Sbjct: 257 NEIIKHPFL 265

Length = 267

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 53.5 bits (128), Expect = 5e-08
 Identities = 55/240 (22%), Positives = 106/240 (44%), Gaps = 31/240 (12%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ K+G G FG+V   + N   + VA+K ++      +A + E ++++ L +HD    +
Sbjct: 9   KLVKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTL-QHD----K 62

Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V++         I I+ E +   SL DFL+ +      +  + +   Q+ E +A++   
Sbjct: 63  LVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 122

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  N+L+  +   K+ D+  L+R  +D  Y         IK            
Sbjct: 123 NYIHRDLRAANVLVSESLMCKIADFG-LARVIEDNEYTAREGAKFPIK------------ 169

Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L E+ + G+  +    N + ++ ++R
Sbjct: 170 ----------WTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQR 219

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 53.9 bits (129), Expect = 6e-08
 Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 35/231 (15%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA--MIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+      +++  A+K++  ++I K +E    M E +VL +  +H       
Sbjct: 3   IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF----L 58

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V +   F   + +  V + + G  L+  L++   R F     R    ++  ++ ++H L 
Sbjct: 59  VGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLN 116

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +++ DLKPENILL S  ++ + D+     +                  I+   TT     
Sbjct: 117 IVYRDLKPENILLDSQGHIVLTDFGLCKEN------------------IEHNGTT----- 153

Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
            S    T  Y APEV+    ++   D W +G +L E+  G   F +    E
Sbjct: 154 -STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 203

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 53.5 bits (129), Expect = 6e-08
 Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 39/235 (16%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMI--EIDVLQRLARHDI 150
           ++L  +G+G FG+V      + K++ A+K +      +      +  E  +LQ L  H  
Sbjct: 3   ELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHPF 61

Query: 151 GGTRCVQIRNWFDYRNHICIVFE-KLGPSL-YDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                V +   F    ++ +V +  LG  L Y   +K     F  + V+    +++ ++ 
Sbjct: 62  ----LVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALE 114

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++H   +IH D+KP+NILL    +V + D+              N+    A K+    + 
Sbjct: 115 YLHSKGIIHRDIKPDNILLDEQGHVHITDF--------------NI----ATKVTP-DTL 155

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
           T           T  Y APEV+   G++   D WS+G    E   G+  ++ H  
Sbjct: 156 TTS------TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSR 204

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 53.5 bits (128), Expect = 6e-08
 Identities = 64/251 (25%), Positives = 104/251 (41%), Gaps = 62/251 (24%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +I+  +G+GT+G+V +  + +   L A+KI+  I+   E    E ++LQ L  H      
Sbjct: 25  EIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNH----PN 80

Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL---GRQLLESV---- 207
            V+    F Y+    +     G  L+  L   +  S   +LV+ L   G++L E++    
Sbjct: 81  VVKFYGMF-YKADKLV-----GGQLWLVLELCNGGSV-TELVKGLLICGQRLDEAMISYI 133

Query: 208 --------AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
                     +H  R+IH D+K  NILL +                              
Sbjct: 134 LYGALLGLQHLHNNRIIHRDVKGNNILLTT---------------------------EGG 166

Query: 260 IKLIDFGST---TFEHQDHSYVVSTRHYRAPEVI-----LGLGWNYPCDLWSVGCILVEL 311
           +KL+DFG +   T      +  V T  + APEVI         ++  CD+WS+G   +EL
Sbjct: 167 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIEL 226

Query: 312 CSGE-ALFQTH 321
             G+  LF  H
Sbjct: 227 GDGDPPLFDMH 237

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 54.1 bits (130), Expect = 7e-08
 Identities = 50/219 (22%), Positives = 102/219 (46%), Gaps = 37/219 (16%)

Query: 96  ILSKMGEGTFGQVVECF---DNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ILS +  G+ G+V  C    D ++K++    IV+++   +     EID+L+ ++   I  
Sbjct: 96  ILSSLTPGSEGEVFVCTKHGDEQRKKV----IVKAVTGGKTPGR-EIDILKTISHRAI-- 148

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              + + + + +++ +C+V  K    L+ ++ ++     P++    + R+LLE++A++H 
Sbjct: 149 ---INLIHAYRWKSTVCMVMPKYKCDLFTYVDRSG--PLPLEQAITIQRRLLEALAYLHG 203

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
             +IH D+K ENI L   E   + D+                   +A KL    +     
Sbjct: 204 RGIIHRDVKTENIFLDEPENAVLGDF------------------GAACKL---DAHPDTP 242

Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
           Q + +   T    +PE++    +    D+WS G +L E+
Sbjct: 243 QCYGW-SGTLETNSPELLALDPYCAKTDIWSAGLVLFEM 280

Length = 392

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 53.1 bits (127), Expect = 9e-08
 Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 35/244 (14%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +G+G FG+V  C      ++ A K +  + I K +  +M   E  +L+++    +     
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFV----- 62

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V +   ++ ++ +C+V   + G  L   +       F          ++   +  +H+ R
Sbjct: 63  VSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER 122

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +++ DLKPENILL    ++++ D               ++P+   IK    G        
Sbjct: 123 IVYRDLKPENILLDDHGHIRISDLGLAV----------HVPEGQTIK----GR------- 161

Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 334
               V T  Y APEV+    + +  D W++GC+L E+ +G++ FQ  +       +ER++
Sbjct: 162 ----VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV 217

Query: 335 GPLP 338
             + 
Sbjct: 218 KEVQ 221

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 52.8 bits (127), Expect = 1e-07
 Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 73/268 (27%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA--MIEIDVLQRLARHDIGGTR 154
           L ++G G FG V +        ++A+K +RS    +E    ++++DV+ R        + 
Sbjct: 9   LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMR-------SSD 61

Query: 155 CVQIRNWFDYRNH-----IC-----IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
           C  I  ++          IC     I  +K    +Y+ L+       P ++   LG+  +
Sbjct: 62  CPYIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSV----IPEEI---LGKIAV 114

Query: 205 ESVAFMH----ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            +V  ++    EL++IH D+KP NILL                            ++  I
Sbjct: 115 ATVKALNYLKEELKIIHRDVKPSNILL---------------------------DRNGNI 147

Query: 261 KLIDFG------STTFEHQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVEL 311
           KL DFG       +  + +D       R Y APE I      G++   D+WS+G  L E+
Sbjct: 148 KLCDFGISGQLVDSIAKTRD----AGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEV 203

Query: 312 CSGEALFQTHENL-EHLAMMERVLGPLP 338
            +G+  +    ++ + L  +  V G  P
Sbjct: 204 ATGKFPYPKWNSVFDQLTQV--VKGDPP 229

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 52.3 bits (125), Expect = 1e-07
 Identities = 57/247 (23%), Positives = 108/247 (43%), Gaps = 33/247 (13%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           +  +G+G++G+V         +   IK   +  +  + R+AA  E  +L +L   +I   
Sbjct: 5   VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAY 64

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
           R     +W      + IV     G  LY  L++   +  P + V E   Q+  ++ ++HE
Sbjct: 65  R----ESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE 120

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
             ++H DLK +N+ L     +KV D   ++R  ++                D  ST    
Sbjct: 121 KHILHRDLKTQNVFLTRTNIIKVGDLG-IARVLENQC--------------DMAST---- 161

Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE-NLEHLAMME 331
                ++ T +Y +PE+     +NY  D+W++GC + E+ + +  F   + N     ++E
Sbjct: 162 -----LIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIE 216

Query: 332 RVLGPLP 338
             L P+P
Sbjct: 217 GKLPPMP 223

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 52.8 bits (126), Expect = 2e-07
 Identities = 50/225 (22%), Positives = 103/225 (45%), Gaps = 37/225 (16%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEID--VLQRLARHD--IGGT 153
           +G G++ +V+     + + + A+K+V+   +N   +   ++ +  V ++ + H   +G  
Sbjct: 3   IGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 62

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            C Q  +    R    I +   G  ++   R+   R  P +  R    ++  ++ ++HE 
Sbjct: 63  SCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER 115

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
            +I+ DLK +N+LL S  ++K+ DY       K+G              +  G TT    
Sbjct: 116 GIIYRDLKLDNVLLDSEGHIKLTDYGM----CKEG--------------LRPGDTT---- 153

Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
             S    T +Y APE++ G  + +  D W++G ++ E+ +G + F
Sbjct: 154 --STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 52.3 bits (125), Expect = 2e-07
 Identities = 60/238 (25%), Positives = 104/238 (43%), Gaps = 41/238 (17%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA--MIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+           A+K++  ++I K +E    M E +VL +  +H       
Sbjct: 3   IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPF----L 58

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V +   F     +  V + + G  L+  L++   R F     R    ++  ++ ++H L 
Sbjct: 59  VGLHYSFQTAEKLYFVLDYVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLN 116

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +I+ DLKPENILL S  +V + D+       K+G              ++   TT     
Sbjct: 117 IIYRDLKPENILLDSQGHVVLTDFGL----CKEG--------------VEPEETT----- 153

Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF------QTHENLEH 326
            S    T  Y APEV+    ++   D W +G +L E+  G   F      Q ++N+ H
Sbjct: 154 -STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH 210

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 52.4 bits (125), Expect = 2e-07
 Identities = 83/345 (24%), Positives = 140/345 (40%), Gaps = 65/345 (18%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR 154
           +S++G G  G V +        ++A K++    K   R   + E+ VL     H+     
Sbjct: 10  ISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPY 64

Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V     F     I I  E + G SL   L++   +  P +++ ++   +L  +A++ E 
Sbjct: 65  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREK 122

Query: 214 -RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            +++H D+KP NIL+ S   +K+ D+                    + +LID  + +F  
Sbjct: 123 HQIMHRDVKPSNILVNSRGEIKLCDF------------------GVSGQLIDSMANSF-- 162

Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                 V TR Y +PE + G  ++   D+WS+G  LVEL  G       +  E  A+  R
Sbjct: 163 ------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGR 216

Query: 333 VL----GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL---------R 379
            +       PH +  R         R   R     G  SR +M A+++LL         +
Sbjct: 217 PVVDGEEGEPHSISPRP--------RPPGRPVSGHGMDSRPAM-AIFELLDYIVNEPPPK 267

Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
           LPN +         D  + +   L  +PAER   +  + H F  R
Sbjct: 268 LPNGVF------TPDFQEFVNKCLIKNPAERADLKMLMNHTFIKR 306

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 51.7 bits (124), Expect = 2e-07
 Identities = 64/244 (26%), Positives = 103/244 (42%), Gaps = 52/244 (21%)

Query: 95  KILSKMGEGTFGQVVEC-FD---NEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K + ++G+G FG V  C +D   +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 7   KFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDN 66

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           I   + V    +   R ++ +V E L P  SL D+L+K+  R     L+     Q+ + +
Sbjct: 67  IVKYKGV---CYSAGRRNLRLVMEYL-PYGSLRDYLQKHRERLDHRKLL-LYASQICKGM 121

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
            ++   R +H DL   NIL+ S   VK+                            DFG 
Sbjct: 122 EYLGSKRYVHRDLATRNILVESENRVKIG---------------------------DFGL 154

Query: 268 TTFEHQDHSYVV------STRHYRAPEVILGLGWNYPCDLWSVGCILVEL-------CSG 314
           T    QD  Y        S   + APE +    ++   D+WS G +L EL       CS 
Sbjct: 155 TKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSP 214

Query: 315 EALF 318
            A F
Sbjct: 215 PAEF 218

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 51.2 bits (122), Expect = 4e-07
 Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 41/222 (18%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSINKYREAAMIEIDVLQRLARHDIGG 152
           L ++G G+FG V    ++   E+VA+K +    +  N+  +  + E+  LQ+L   +   
Sbjct: 26  LHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNT-- 83

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              ++ +  +   +   +V E    S  D L  +      +++   +    L+ +A++H 
Sbjct: 84  ---IEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AITHGALQGLAYLHS 139

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
             +IH D+K  NILL                            +   +KL DFGS +   
Sbjct: 140 HNMIHRDIKAGNILLT---------------------------EPGQVKLADFGSASKSS 172

Query: 273 QDHSYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVEL 311
             +S+ V T ++ APEVIL +    ++   D+WS+G   +EL
Sbjct: 173 PANSF-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 213

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 51.0 bits (122), Expect = 4e-07
 Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 42/222 (18%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIGGTR 154
              +G G  G V + +    + ++A+K++      + ++  M E+++L +     I    
Sbjct: 6   QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYI---- 61

Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            +     F   N I I  E + G SL      + YR  P  ++  +   +++ + ++  L
Sbjct: 62  -IGFYGAFFVENRISICTEFMDGGSL------DVYRKIPEHVLGRIAVAVVKGLTYLWSL 114

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 272
           +++H D+KP N+L+ +   V                           KL DFG ST   +
Sbjct: 115 KILHRDVKPSNMLVNTRGQV---------------------------KLCDFGVSTQLVN 147

Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                 V T  Y APE I G  +    D+WS+G   +EL  G
Sbjct: 148 SIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALG 189

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 51.6 bits (123), Expect = 4e-07
 Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 42/209 (20%)

Query: 117 KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLG 176
           + L+A K V++ ++       EI  L RL   +I     ++I        +  ++ +K  
Sbjct: 193 ERLIA-KRVKAGSRAAIQLENEILALGRLNHENI-----LKIEEILRSEANTYMITQKYD 246

Query: 177 PSLYDFLRKNS--YRSFP-IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV 233
             LY F+   +  ++  P +   R + +QLL +V ++H+ +LIH D+K ENI L      
Sbjct: 247 FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL------ 300

Query: 234 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS-TTFEHQ----DHSYVVSTRHYRAPE 288
                      + DG           I L DFG+   FE +    D+ +V  T    +PE
Sbjct: 301 -----------NCDGK----------IVLGDFGTAMPFEKEREAFDYGWV-GTVATNSPE 338

Query: 289 VILGLGWNYPCDLWSVGCILVELCSGEAL 317
           ++ G G+    D+WS G IL+++ S +  
Sbjct: 339 ILAGDGYCEITDIWSCGLILLDMLSHDFC 367

Length = 501

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 50.4 bits (121), Expect = 5e-07
 Identities = 64/260 (24%), Positives = 100/260 (38%), Gaps = 78/260 (30%)

Query: 100 MGEGTFGQVVECFDNEK--KEL-VAIKIVR--SINKYREAAMIEIDVLQRLARHDIGGTR 154
           +G G FG VV+     K  KE+ VA+K ++   I   ++  + E  V+ +L         
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL--------- 53

Query: 155 CVQIRNWFDYRNHICIV----------------FEKLGPSLYDFLRKNSYRSFPIDLVRE 198
                      +H CIV                   LGP L  +L+K   R  P+  ++E
Sbjct: 54  -----------DHPCIVRLIGVCKGEPLMLVMELAPLGP-LLKYLKKR--REIPVSDLKE 99

Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
           L  Q+   +A++     +H DL   N+LLV+    K+ D+  +SR+   GS         
Sbjct: 100 LAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFG-MSRALGAGS--------- 149

Query: 259 AIKLIDFGSTTFEHQDHSYVVSTRHYR------APEVILGLGWNYPCDLWSVGCILVELC 312
                             Y  +T   R      APE I    ++   D+WS G  L E  
Sbjct: 150 -----------------DYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAF 192

Query: 313 S-GEALFQTHENLEHLAMME 331
           S G   +   +  E +AM+E
Sbjct: 193 SYGAKPYGEMKGAEVIAMLE 212

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 50.8 bits (121), Expect = 6e-07
 Identities = 46/221 (20%), Positives = 100/221 (45%), Gaps = 29/221 (13%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G++ +V+     +  ++ A+K+V+    + +  +  +   + +          V + 
Sbjct: 3   IGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLH 62

Query: 160 NWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
           + F   + + +V E +  G  ++   R+   R  P +  R    ++  ++ F+HE  +I+
Sbjct: 63  SCFQTTSRLFLVIEYVNGGDLMFHMQRQ---RKLPEEHARFYAAEICIALNFLHERGIIY 119

Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DLK +N+LL +  ++K+ DY       K+G              +  G TT      S 
Sbjct: 120 RDLKLDNVLLDADGHIKLTDYGM----CKEG--------------LGPGDTT------ST 155

Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
              T +Y APE++ G  + +  D W++G ++ E+ +G + F
Sbjct: 156 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 50.1 bits (119), Expect = 7e-07
 Identities = 51/234 (21%), Positives = 103/234 (44%), Gaps = 39/234 (16%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ ++G GT+G V +  +    EL AIK+++ +    + A+++ +++      D   + 
Sbjct: 12  ELIQRIGSGTYGDVYKARNVNTGELAAIKVIK-LEPGEDFAVVQQEIIMM---KDCKHSN 67

Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPID--LVRELGRQLLESVAFMH 211
            V     +  R+ + I  E  G  SL D      + + P+    +  + R+ L+ + ++H
Sbjct: 68  IVAYFGSYLRRDKLWICMEFCGGGSLQDIY----HVTGPLSESQIAYVSRETLQGLYYLH 123

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
               +H D+K  NILL    +VK+ D+   ++ +   +  K+                  
Sbjct: 124 SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSF----------------- 166

Query: 272 HQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGE-ALFQTH 321
                  + T ++ APEV       G+N  CD+W+VG   +EL   +  +F  H
Sbjct: 167 -------IGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLH 213

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 50.2 bits (120), Expect = 8e-07
 Identities = 64/267 (23%), Positives = 110/267 (41%), Gaps = 54/267 (20%)

Query: 95  KILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLA 146
           ++L  +G G +G+V    +   ++  +L A+K+++        K  E    E  VL+ + 
Sbjct: 3   ELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVR 62

Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           R        V +   F     + ++ + + G  L+  L +  +  F    VR    +++ 
Sbjct: 63  RCPF----LVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREH--FTESEVRVYIAEIVL 116

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           ++  +H+L +I+ D+K ENILL                   +G           + L DF
Sbjct: 117 ALDHLHQLGIIYRDIKLENILL-----------------DSEGH----------VVLTDF 149

Query: 266 G-STTF----EHQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALF 318
           G S  F    E + +S+   T  Y APEVI G   G +   D WS+G +  EL +G + F
Sbjct: 150 GLSKEFLAEEEERAYSF-CGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPF 208

Query: 319 QTH-ENLEHLAMMERVLG---PLPHHM 341
               E      +  R+L    P P  M
Sbjct: 209 TVDGEQNSQSEISRRILKSKPPFPKTM 235

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 49.9 bits (119), Expect = 8e-07
 Identities = 72/297 (24%), Positives = 122/297 (41%), Gaps = 56/297 (18%)

Query: 95  KILSKMGEGTFGQVVEC-FDNE---KKELVAIKIVRSINKYREAAMI--EIDVLQRLARH 148
           K +  +GEG FG+V  C +D E     E VA+K ++  +     A +  EI++L+ L   
Sbjct: 7   KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 66

Query: 149 DIGGTR--CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL--GRQL 203
           +I   +  C +     D  N I ++ E L   SL ++L +N  +   I+L ++L    Q+
Sbjct: 67  NIVKYKGICTE-----DGGNGIKLIMEFLPSGSLKEYLPRNKNK---INLKQQLKYAVQI 118

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
            + + ++   + +H DL   N+L+ S   VK+ D+        D  Y+        +K  
Sbjct: 119 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYY-------TVK-D 170

Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL---CSGEALFQT 320
           D  S  F             + APE ++   +    D+WS G  L EL   C  E+    
Sbjct: 171 DLDSPVF-------------WYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSES---- 213

Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVW 375
                 + +  +++GP    M +    R  +    G RL  P          MR  W
Sbjct: 214 ----SPMTLFLKMIGPTHGQMTV---TRLVRVLEEGKRLPRPPNCPEEVYQLMRKCW 263

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 49.9 bits (119), Expect = 2e-06
 Identities = 71/272 (26%), Positives = 103/272 (37%), Gaps = 67/272 (24%)

Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDL--VRELGRQLLESVAFMHELRLIHTDLKPENIL 226
           C+V  K    LY +L     R  P+ L  V  + RQLL ++ ++H   +IH D+K EN+L
Sbjct: 236 CLVLPKYRSDLYTYL---GARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVL 292

Query: 227 LVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY-----VVST 281
           +                         N P+   I L DFG+  F     S      +  T
Sbjct: 293 V-------------------------NGPED--ICLGDFGAACFARGSWSTPFHYGIAGT 325

Query: 282 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA-LFQTHENLEHLAMMERVL------ 334
               APEV+ G  +    D+WS G ++ E     A LF      E      ++L      
Sbjct: 326 VDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQA 385

Query: 335 ----GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
                  P H      R   +Y  R AR   P  A +R +    +KL    +L +++   
Sbjct: 386 QVHVDEFPQHA---GSRLVSQYRHRAARNRRP--AYTRPAWTRYYKL----DLDVEY--- 433

Query: 391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                  L+   L +D A R  A E LR P F
Sbjct: 434 -------LVCRALTFDGARRPSAAELLRLPLF 458

Length = 461

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 36/222 (16%)

Query: 96  ILSKMGEGTFGQVVE-CFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHDIGGT 153
           +  K+G G FG+V E  + N  +  VAIKI++S +  ++     E+  L+RL RH     
Sbjct: 10  LERKLGSGYFGEVWEGLWKNRVR--VAIKILKSDDLLKQQDFQKEVQALKRL-RHK---- 62

Query: 154 RCVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             + +         + I+ E +   SL  FLR    +  P+  + ++  Q+ E +A++ E
Sbjct: 63  HLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEE 122

Query: 213 LRLIHTDLKPENILLVSAEYV-KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
              IH DL   NI LV  + V KV D+  L+R  K+  Y   L     I           
Sbjct: 123 QNSIHRDLAARNI-LVGEDLVCKVADFG-LARLIKEDVY---LSSDKKIPY--------- 168

Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                       + APE      ++   D+WS G +L E+ +
Sbjct: 169 -----------KWTAPEAASHGTFSTKSDVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 49.4 bits (118), Expect = 2e-06
 Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 27/121 (22%)

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           +++ ++  +H +  IH D+KP+N+LL  + ++K+ D+    +   +G             
Sbjct: 150 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV----------- 198

Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEAL 317
                       D +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  
Sbjct: 199 ----------RCDTA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 246

Query: 318 F 318
           F
Sbjct: 247 F 247

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 48.7 bits (116), Expect = 2e-06
 Identities = 48/225 (21%), Positives = 94/225 (41%), Gaps = 35/225 (15%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +G+G FG+V  C      ++ A K +  + I K +  AM   E  +L++     +     
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK-----VNSRFV 62

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V +   ++ ++ +C+V   + G  L   +       F  +       ++   +  +H  R
Sbjct: 63  VSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER 122

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +++ DLKPENILL    ++++ D   L+    +G   +                      
Sbjct: 123 IVYRDLKPENILLDDYGHIRISDLG-LAVEIPEGETIRGR-------------------- 161

Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
               V T  Y APEV+    + +  D W +GC++ E+  G++ F+
Sbjct: 162 ----VGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFR 202

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 48.6 bits (116), Expect = 3e-06
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 25/114 (21%)

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H+  +I+ DLKPENILL +  +VK+ D+               L K S    I  G+ T
Sbjct: 116 LHQQGIIYRDLKPENILLDAQGHVKLTDF--------------GLCKES----IHEGTVT 157

Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
                H++   T  Y APE+++  G     D WS+G ++ ++ +G   F T EN
Sbjct: 158 -----HTF-CGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPF-TAEN 204

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 48.3 bits (115), Expect = 4e-06
 Identities = 56/234 (23%), Positives = 91/234 (38%), Gaps = 48/234 (20%)

Query: 13  NMDKRPRKRPRLTWDVP---PPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTG 69
               RPR+RP LT  +P   P L  P  LP             P  + SS    +     
Sbjct: 19  TTKSRPRRRPDLTLPLPQRDPSLAVPLPLP-------------PPSSSSSSSSSSSASGS 65

Query: 70  SPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV--RS 127
           +P       +   V              +++G G  G V +        L A+K++    
Sbjct: 66  APSAAKSLSELERV--------------NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH 111

Query: 128 INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNS 187
            +  R     EI++L R   H       V+  + FD+   I ++ E        F+   S
Sbjct: 112 EDTVRRQICREIEIL-RDVNH----PNVVKCHDMFDHNGEIQVLLE--------FMDGGS 158

Query: 188 YRSFPIDLVREL---GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
                I   + L    RQ+L  +A++H   ++H D+KP N+L+ SA+ VK+ D+
Sbjct: 159 LEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADF 212

Length = 353

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 47.8 bits (114), Expect = 5e-06
 Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 36/230 (15%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRL--ARH 148
           + L+ +G G FG+V+     +  EL AIK ++          E+ M E  + +     RH
Sbjct: 2   RCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERH 61

Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                  V +   F   +H+C V E    +  D +       F           ++  + 
Sbjct: 62  PF----LVNLFACFQTEDHVCFVMEYA--AGGDLMMHIHTDVFSEPRAVFYAACVVLGLQ 115

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++HE ++++ DLK +N+LL +  +VK+ D+       K+G              + FG  
Sbjct: 116 YLHENKIVYRDLKLDNLLLDTEGFVKIADFGL----CKEG--------------MGFGDR 157

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
           T      S    T  + APEV+    +    D W +G ++ E+  GE+ F
Sbjct: 158 T------STFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPF 201

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 47.9 bits (114), Expect = 5e-06
 Identities = 70/297 (23%), Positives = 115/297 (38%), Gaps = 75/297 (25%)

Query: 100 MGEGTFGQVVE--CFDNEKKEL---VAIKIVRSINKY--REAAMIEIDVLQRLARHDIGG 152
           +G G FG+VVE   +   K +    VA+K+++       REA M E+ ++  L  H+   
Sbjct: 43  LGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHE--- 99

Query: 153 TRCVQIRNWFDYRNH---ICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
                I N          I ++ E    G  L +FLR+       ++ +     Q+ + +
Sbjct: 100 ----NIVNLLGACTIGGPILVITEYCCYG-DLLNFLRRKRESFLTLEDLLSFSYQVAKGM 154

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
           AF+     IH DL   N+LL   + VK+ D+  L+R   +                    
Sbjct: 155 AFLASKNCIHRDLAARNVLLTHGKIVKICDFG-LARDIMN-------------------- 193

Query: 268 TTFEHQDHSYVV--STR---HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
                 D +YVV  + R    + APE I    + +  D+WS G +L E+ S         
Sbjct: 194 ------DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS--------- 238

Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWKL 377
                      LG  P+  +   D +  K  + G R+  P+ A +   D M+  W  
Sbjct: 239 -----------LGSNPYPGMP-VDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDA 283

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 47.2 bits (112), Expect = 5e-06
 Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 35/246 (14%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
            L ++G G FG VV+      +  VAIK+++  +   +  + E  V+ +L+   +     
Sbjct: 8   FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKL----- 61

Query: 156 VQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           VQ+      +  I IV E +    L ++LR++  R  P  L+ E+ + + E +A++   +
Sbjct: 62  VQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLL-EMCKDVCEGMAYLESKQ 120

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
            IH DL   N L+     VKV D+  LSR   D  Y  ++     ++             
Sbjct: 121 FIHRDLAARNCLVDDQGCVKVSDFG-LSRYVLDDEYTSSVGSKFPVR------------- 166

Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEA---LFQTHENLEHLAMM 330
                    +  PEV+L   ++   D+W+ G ++ E+ S G+     F   E +E ++  
Sbjct: 167 ---------WSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQG 217

Query: 331 ERVLGP 336
            R+  P
Sbjct: 218 LRLYRP 223

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 47.3 bits (112), Expect = 6e-06
 Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 32/239 (13%)

Query: 99  KMGEGTFGQVVE-CFDNEKKEL-VAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR 154
           ++G G FG V +  +   KK++ VAIK++++ N+   R+  M E +++ +L    I    
Sbjct: 2   ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYI---- 57

Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
            V++    +    + ++    G  L  FL         +  V EL  Q+   + ++    
Sbjct: 58  -VRMIGVCEAEALMLVMEMASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKN 115

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
            +H DL   N+LLV+  Y K+ D+        D SY+K   +S        G    +   
Sbjct: 116 FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK--ARS-------AGKWPLK--- 163

Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                    + APE I    ++   D+WS G  + E  S G+  ++  +  E ++ +E+
Sbjct: 164 ---------WYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQ 213

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 47.5 bits (113), Expect = 7e-06
 Identities = 58/237 (24%), Positives = 102/237 (43%), Gaps = 45/237 (18%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-----EAAMI--EIDVLQRLAR 147
           +IL  +G G FG+V         ++ A+KI   +NK+      E A    E DVL    R
Sbjct: 4   EILKVIGRGAFGEVAVVKMKNTGQVYAMKI---LNKWEMLKRAETACFREERDVLVNGDR 60

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             I       +   F   N++ +V +  +G  L   L K   R  P D+ R    +++ +
Sbjct: 61  RWI-----TNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDR-LPEDMARFYLAEMVLA 114

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           +  +H+L  +H D+KP+N+LL    ++++ D+                   S ++L+  G
Sbjct: 115 IDSVHQLGYVHRDIKPDNVLLDKNGHIRLADF------------------GSCLRLLADG 156

Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALF 318
           +        +  V T  Y +PE++  +      +   CD WS+G  + E+  GE  F
Sbjct: 157 TV-----QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPF 208

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 47.5 bits (113), Expect = 7e-06
 Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 24/130 (18%)

Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
           R  P +  R    ++  ++ F+HE  +I+ DLK +N+LL +  ++K+ DY       + G
Sbjct: 91  RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG 150

Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 308
                             ++TF          T +Y APE++ G  + +  D W++G ++
Sbjct: 151 DT----------------TSTF--------CGTPNYIAPEILRGEDYGFSVDWWALGVLM 186

Query: 309 VELCSGEALF 318
            E+ +G + F
Sbjct: 187 FEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 46.9 bits (111), Expect = 7e-06
 Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 42/225 (18%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDIGG 152
           +++ ++G GT+G V +  +    EL A+KI++ +    + ++I  EI +++     +I  
Sbjct: 12  ELIQRVGSGTYGDVYKARNLHTGELAAVKIIK-LEPGDDFSLIQQEIFMVKECKHCNI-- 68

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPID--LVRELGRQLLESVAF 209
              V     +  R  + I  E  G  SL D      + + P+    +  + R+ L+ +A+
Sbjct: 69  ---VAYFGSYLSREKLWICMEYCGGGSLQDIY----HVTGPLSELQIAYVCRETLQGLAY 121

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H    +H D+K  NILL     VK+ D+   ++ +   +  K+                
Sbjct: 122 LHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSF--------------- 166

Query: 270 FEHQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVEL 311
                    + T ++ APEV       G+N  CD+W+VG   +EL
Sbjct: 167 ---------IGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 47.2 bits (112), Expect = 8e-06
 Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 36/233 (15%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+     E   L A+K+++      +   E  M E  +L     H       
Sbjct: 3   LGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPF----L 58

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
            Q+   F   + +  V E + G  L   ++K+  R F     R    ++  ++ F+H+  
Sbjct: 59  TQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKG 116

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +I+ DLK +N+LL    + K+ D+        +G                  ++TF    
Sbjct: 117 IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT----------------TSTF---- 156

Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                 T  Y APE++  + +    D W++G +L E+  G A F+  EN + L
Sbjct: 157 ----CGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEA-ENEDDL 204

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 46.9 bits (111), Expect = 8e-06
 Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 25/113 (22%)

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +   R+++ DLKPENILL    ++++ D     +          +P+   ++    G   
Sbjct: 118 LQRERIVYRDLKPENILLDDRGHIRISDLGLAVQ----------IPEGETVR----GR-- 161

Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
                    V T  Y APEVI    + +  D W +GC++ E+  G++ F+  +
Sbjct: 162 ---------VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRK 205

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 46.9 bits (111), Expect = 1e-05
 Identities = 48/225 (21%), Positives = 96/225 (42%), Gaps = 35/225 (15%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +G+G FG+V  C      ++ A K +  + I K +  +M   E  +L+++    +     
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFV----- 62

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V +   ++ ++ +C+V   + G  L   +       F  +       ++L  +  +H   
Sbjct: 63  VNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN 122

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
            ++ DLKPENILL    ++++ D     +          +P+  +I+    G        
Sbjct: 123 TVYRDLKPENILLDDYGHIRISDLGLAVK----------IPEGESIR----GR------- 161

Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
               V T  Y APEV+    +    D W +GC++ E+  G++ F+
Sbjct: 162 ----VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFR 202

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 46.5 bits (110), Expect = 1e-05
 Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 36/229 (15%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G G FG+V  C   +  ++ A+K +      + +    A+ E  +L  ++  D     C
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 61

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           +     F   + +C + + + G  L+  L ++    F    +R    +++  +  MH   
Sbjct: 62  MTYA--FHTPDKLCFILDLMNGGDLHYHLSQHGV--FSEKEMRFYATEIILGLEHMHNRF 117

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +++ DLKP NILL    +V++ D       SK        P +S                
Sbjct: 118 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------PHAS---------------- 155

Query: 275 HSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
               V T  Y APEV+  G  ++   D +S+GC+L +L  G + F+ H+
Sbjct: 156 ----VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHK 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 46.3 bits (110), Expect = 1e-05
 Identities = 56/262 (21%), Positives = 97/262 (37%), Gaps = 81/262 (30%)

Query: 170 IVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENIL 226
           I  E +  SL  F +K  +   + P D++ ++   +++++ ++H  L +IH D+KP N+L
Sbjct: 77  ICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVL 136

Query: 227 LVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRA 286
           +     VK+ D+               L  S A K ID G               + Y A
Sbjct: 137 INRNGQVKLCDF----------GISGYLVDSVA-KTIDAGC--------------KPYMA 171

Query: 287 PEVILG----LGWNYPCDLWSVGCILVELCSGEALFQT-HENLEHLAMMERVLGPLPHHM 341
           PE I       G++   D+WS+G  ++EL +G   + +     + L  +  V  P P   
Sbjct: 172 PERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQV--VEEPSP--- 226

Query: 342 VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG 401
                                                +LP       +  + +  D +  
Sbjct: 227 -------------------------------------QLPA------EKFSPEFQDFVNK 243

Query: 402 LLRYDPAERLKAREALRHPFFT 423
            L+ +  ER    E L+HPFF 
Sbjct: 244 CLKKNYKERPNYPELLQHPFFE 265

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 46.0 bits (109), Expect = 1e-05
 Identities = 56/273 (20%), Positives = 94/273 (34%), Gaps = 89/273 (32%)

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V +  +    + + +V +   G  L+  + K  + + P + V+    +++ ++  +H   
Sbjct: 48  VCLHKYIVSEDSVFLVLQHAEGGKLWSHISK--FLNIPEECVKRWAAEMVVALDALHREG 105

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           ++  DL P NILL    ++++             +YF                +  E   
Sbjct: 106 IVCRDLNPNNILLDDRGHIQL-------------TYFSRW-------------SEVEDSC 139

Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 334
               V    Y APEV         CD WS+G IL EL +G+ L + H             
Sbjct: 140 DGEAVE-NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECH------------- 185

Query: 335 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 394
                                      P G  +  +       L +P    + V   A  
Sbjct: 186 ---------------------------PSGINTHTT-------LNIP----EWVSEEARS 207

Query: 395 LIDLLQGLLRYDPAERLKAREA-----LRHPFF 422
           L+   Q LL+++P ERL A  A       HPFF
Sbjct: 208 LL---QQLLQFNPTERLGAGVAGVEDIKSHPFF 237

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 46.4 bits (110), Expect = 2e-05
 Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 39/246 (15%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+        E+ AIK+++     +    +  M E  +L   A+H       
Sbjct: 3   LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPF----L 58

Query: 156 VQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             +   F  ++ +  V E +  G  ++   R    R F     R    ++  ++ F+H  
Sbjct: 59  TALHCCFQTKDRLFFVMEYVNGGDLMFQIQRS---RKFDEPRSRFYAAEVTLALMFLHRH 115

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
            +I+ DLK +NILL +  + K+ D+        +G                  +TTF   
Sbjct: 116 GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT----------------TTTF--- 156

Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT--HENLEHLAMME 331
                  T  Y APE++  L +    D W++G ++ E+ +G+  F+    ++L    + +
Sbjct: 157 -----CGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD 211

Query: 332 RVLGPL 337
            VL P+
Sbjct: 212 DVLYPV 217

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 51/219 (23%), Positives = 79/219 (36%), Gaps = 79/219 (36%)

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           MH   +++ DLKP NILL    +V++ D            + K  P +S           
Sbjct: 113 MHNRFVVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKPHAS----------- 155

Query: 270 FEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
                    V T  Y APEV+  G+ ++   D +S+GC+L +L  G + F+ H+  +   
Sbjct: 156 ---------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE 206

Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
           +                DR           ++ PD  +                      
Sbjct: 207 I----------------DRMTLT-----MAVELPDSFSP--------------------- 224

Query: 389 DHSAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 422
                +L  LL+GLL+ D   RL      A+E   HPFF
Sbjct: 225 -----ELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFF 258

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 37/228 (16%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGG 152
           L  +G+G+FG+V+        EL AIKI++      +   E  M+E  VL    +     
Sbjct: 5   LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPF-- 62

Query: 153 TRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               Q+ + F   + +  V E +  G  +Y   +   ++  P  +      ++   + F+
Sbjct: 63  --LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKE-PQAVF--YAAEISVGLFFL 117

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H   +I+ DLK +N++L S  ++K+ D+        DG                  + TF
Sbjct: 118 HRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG----------------VTTRTF 161

Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
                     T  Y APE+I    +    D W+ G +L E+ +G+  F
Sbjct: 162 --------CGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 201

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 37/222 (16%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR 154
           +S++G G  G V +        ++A K++    K   R   + E+ VL     H+     
Sbjct: 10  ISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPY 64

Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V     F     I I  E + G SL   L+K      P  ++ ++   +++ + ++ E 
Sbjct: 65  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREK 122

Query: 214 -RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            +++H D+KP NIL+ S   +K+ D+                    + +LID  + +F  
Sbjct: 123 HKIMHRDVKPSNILVNSRGEIKLCDF------------------GVSGQLIDSMANSF-- 162

Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                 V TR Y +PE + G  ++   D+WS+G  LVE+  G
Sbjct: 163 ------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIG 198

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 45.0 bits (106), Expect = 5e-05
 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 27/113 (23%)

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H +  IH D+KP+N+LL  + ++K+ D+    + +K+G    +                
Sbjct: 158 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT--------------- 202

Query: 270 FEHQDHSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALF 318
                    V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 203 --------AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 44.5 bits (105), Expect = 5e-05
 Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 42/233 (18%)

Query: 95  KILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRS--INKYREAAMIEIDVLQRLAR 147
           KI   +G G FG+V  C        +++  VAIK ++S    K R   + E  ++ +   
Sbjct: 7   KIEEVIGAGEFGEV--CRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 64

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
            +I     V  ++       + I+ E +   +L  FLR+N  +   I LV  L R +   
Sbjct: 65  PNIIHLEGVVTKS-----RPVMIITEFMENGALDSFLRQNDGQFTVIQLVGML-RGIAAG 118

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLI 263
           + ++ E+  +H DL   NIL+ S    KV D+   +FL   + D +Y  +L     I+  
Sbjct: 119 MKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIR-- 176

Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE 315
                               + APE I    +    D+WS G ++ E+ S GE
Sbjct: 177 --------------------WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 209

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 44.1 bits (104), Expect = 5e-05
 Identities = 53/238 (22%), Positives = 96/238 (40%), Gaps = 32/238 (13%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           + ++G G FG VV       +  VAIK +       E  + E  V+ +L+       + V
Sbjct: 9   MKELGSGQFG-VVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSH-----PKLV 62

Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           Q+      +  + IV E +    L ++LR+        D++  + + + E + ++     
Sbjct: 63  QLYGVCTQQKPLYIVTEFMENGCLLNYLRQR-QGKLSKDMLLSMCQDVCEGMEYLERNSF 121

Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           IH DL   N L+ S   VKV D+  ++R   D  Y  +      +K              
Sbjct: 122 IHRDLAARNCLVSSTGVVKVSDFG-MTRYVLDDEYTSSSGAKFPVK-------------- 166

Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                   +  PEV     ++   D+WS G ++ E+ + G+  F+   N E + M+ R
Sbjct: 167 --------WSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISR 216

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 44.0 bits (104), Expect = 7e-05
 Identities = 58/246 (23%), Positives = 99/246 (40%), Gaps = 47/246 (19%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEID------VLQRLARHDI 150
           L ++G G FG VV       K  VAIK++R      E AM E D      V+ +L+  ++
Sbjct: 9   LKELGSGQFG-VVHLGKWRGKIDVAIKMIR------EGAMSEDDFIEEAKVMMKLSHPNL 61

Query: 151 GGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                VQ+      +  I IV E    G  L ++LR+   +    + + ++   + E++ 
Sbjct: 62  -----VQLYGVCTKQRPIFIVTEYMANG-CLLNYLRERKGK-LGTEWLLDMCSDVCEAME 114

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++     IH DL   N L+     VKV D+  L+R   D  Y  +      +K       
Sbjct: 115 YLESNGFIHRDLAARNCLVGEDNVVKVSDFG-LARYVLDDQYTSSQGTKFPVK------- 166

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
                          +  PEV     ++   D+WS G ++ E+ S   +   +E   +  
Sbjct: 167 ---------------WAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKM--PYERFSNSE 209

Query: 329 MMERVL 334
           ++E V 
Sbjct: 210 VVESVS 215

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 44.2 bits (104), Expect = 8e-05
 Identities = 55/238 (23%), Positives = 95/238 (39%), Gaps = 52/238 (21%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMI--EIDVLQRLARHDIG 151
           ++  +G G FG+V        +++ A+K++      K  ++A    E D++         
Sbjct: 47  VVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-----AN 101

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               VQ+   F    ++ +V E + G  L + +   S    P    +    +++ ++  +
Sbjct: 102 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM---SNYDVPEKWAKFYTAEVVLALDAI 158

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS--- 267
           H + LIH D+KP+N+LL                            K   +KL DFG+   
Sbjct: 159 HSMGLIHRDVKPDNMLL---------------------------DKHGHLKLADFGTCMK 191

Query: 268 ---TTFEHQDHSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALF 318
              T     D +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 192 MDETGMVRCDTA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 44.2 bits (104), Expect = 9e-05
 Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 39/234 (16%)

Query: 95  KILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR-LARHDI 150
           ++L  +G G +G+V    +   ++  +L A+K+++     ++A  +E    +R +  H  
Sbjct: 3   ELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVR 62

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                V +   F     + ++ + + G  ++  L +     F  D VR    +++ ++  
Sbjct: 63  QSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDN--FSEDEVRFYSGEIILALEH 120

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 268
           +H+L +++ D+K ENILL S  +V                            L DFG S 
Sbjct: 121 LHKLGIVYRDIKLENILLDSEGHVV---------------------------LTDFGLSK 153

Query: 269 TF--EHQDHSY-VVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF 318
            F  E ++ +Y    T  Y APE+I G  G     D WS+G ++ EL +G + F
Sbjct: 154 EFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPF 207

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 43.8 bits (103), Expect = 9e-05
 Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 39/236 (16%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGG 152
           L  +G+G+FG+V+        EL AIKI++      +   E  M+E  VL    +     
Sbjct: 5   LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPF-- 62

Query: 153 TRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRS-FPIDLVRELGRQLLESVAF 209
               Q+ + F   + +  V E +  G  +Y   +   ++    +    E+   L     F
Sbjct: 63  --LTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLF----F 116

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H   +I+ DLK +N++L S  ++K+ D+     +  DG   K                T
Sbjct: 117 LHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTK----------------T 160

Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
           F          T  Y APE+I    +    D W+ G +L E+ +G+A F+  +  E
Sbjct: 161 F--------CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 208

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 42.3 bits (99), Expect = 3e-04
 Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 28/168 (16%)

Query: 100 MGEGTFGQVVECF--DNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGTR 154
           +GEG FGQV+      +  K   AIK+++   S N +R+ A  E++VL +L  H      
Sbjct: 10  IGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAG-ELEVLCKLGHH----PN 64

Query: 155 CVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELG-------RQLLE 205
            + +    + R ++ I  E   P  +L DFLRK+          +E G       +QLL+
Sbjct: 65  IINLLGACENRGYLYIAIE-YAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQ 123

Query: 206 -------SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246
                   + ++ E + IH DL   N+L+      K+ D+  LSR  +
Sbjct: 124 FASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFG-LSRGEE 170

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 42.3 bits (99), Expect = 3e-04
 Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 37/191 (19%)

Query: 92  PRCKIL--SKMGEGTFGQVVEC---------------FDNEKKELVAIKIVRS-INKY-R 132
           PR ++    K+GEG FG+V  C               FD  +  LVA+K++R+ + K  R
Sbjct: 3   PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDG-QPVLVAVKMLRADVTKTAR 61

Query: 133 EAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRK------ 185
              + EI ++ RL   +I     V + +     + +C++ E +    L  FL +      
Sbjct: 62  NDFLKEIKIMSRLKNPNIIRLLGVCVSD-----DPLCMITEYMENGDLNQFLSQREIEST 116

Query: 186 ----NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241
               N+  S  I  +  +  Q+   + ++  L  +H DL   N L+ +   +K+ D+  +
Sbjct: 117 FTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFG-M 175

Query: 242 SRSSKDGSYFK 252
           SR+   G Y++
Sbjct: 176 SRNLYSGDYYR 186

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 50/233 (21%), Positives = 96/233 (41%), Gaps = 48/233 (20%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGG 152
           +L ++G+G +G V +         +A+K +R     +K+ +  M E+D+L +     I  
Sbjct: 5   VLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIM-ELDILHKAVSPYI-- 61

Query: 153 TRCVQIRNWFDYRN--HICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
              V     F      ++C+ +   G    LY      +    P D++R +   +++ + 
Sbjct: 62  ---VDFYGAFFIEGAVYMCMEYMDAGSLDKLYA--GGVATEGIPEDVLRRITYAVVKGLK 116

Query: 209 FMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
           F+ E   +IH D+KP N+L+     VK+ D+         G+   +L K++         
Sbjct: 117 FLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGV------SGNLVASLAKTN--------- 161

Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLG------WNYPCDLWSVGCILVELCSG 314
                      +  + Y APE I   G      +    D+WS+G  ++E+  G
Sbjct: 162 -----------IGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALG 203

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 41.9 bits (98), Expect = 3e-04
 Identities = 53/246 (21%), Positives = 96/246 (39%), Gaps = 65/246 (26%)

Query: 100 MGEGTFGQVVECFDNEKKEL-----VAIKIVR---SINKYREAAMIEIDVLQRLARHDI- 150
           +GEG FG+VV+      K       VA+K+++   S ++ R   + E ++L+++    + 
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELR-DLLSEFNLLKQVNHPHVI 66

Query: 151 ---GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLR---------------KNSY---- 188
              G   C Q     D    + + + K G SL  FLR               +NS     
Sbjct: 67  KLYGA--CSQ-----DGPLLLIVEYAKYG-SLRSFLRESRKVGPSYLGSDGNRNSSYLDN 118

Query: 189 ---RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
              R+  +  +     Q+   + ++ E++L+H DL   N+L+     +K+ D+       
Sbjct: 119 PDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVY 178

Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
           ++ SY K       +K +   S      DH Y   +                  D+WS G
Sbjct: 179 EEDSYVKRSKGRIPVKWMAIESLF----DHIYTTQS------------------DVWSFG 216

Query: 306 CILVEL 311
            +L E+
Sbjct: 217 VLLWEI 222

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 41.9 bits (98), Expect = 4e-04
 Identities = 38/142 (26%), Positives = 58/142 (40%), Gaps = 37/142 (26%)

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H+L +I+ D+K ENILL S                 +G           + L DFG + 
Sbjct: 121 LHKLGIIYRDIKLENILLDS-----------------NGH----------VVLTDFGLSK 153

Query: 270 FEHQDHSY----VVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALFQTH-E 322
             H+D          T  Y AP+++ G   G +   D WS+G ++ EL +G + F    E
Sbjct: 154 EFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE 213

Query: 323 NLEHLAMMERVLG---PLPHHM 341
                 +  R+L    P P  M
Sbjct: 214 KNSQAEISRRILKSEPPYPQEM 235

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 41.6 bits (98), Expect = 4e-04
 Identities = 52/221 (23%), Positives = 90/221 (40%), Gaps = 37/221 (16%)

Query: 95  KILSKMGEGTFGQVVE-CFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           K+ + +G+G FG V+   +  +K   VA+K ++  +   +A + E  V+  L RH     
Sbjct: 9   KLGATIGKGEFGDVMLGDYRGQK---VAVKCLKDDSTAAQAFLAEASVMTTL-RHP---- 60

Query: 154 RCVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             VQ+       N + IV E +   SL D+LR        +         + E + ++ E
Sbjct: 61  NLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEE 120

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
              +H DL   N+L+      KV D+  L++ +  G     LP    +K           
Sbjct: 121 KNFVHRDLAARNVLVSEDLVAKVSDFG-LAKEASQGQDSGKLP----VK----------- 164

Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                      + APE +    ++   D+WS G +L E+ S
Sbjct: 165 -----------WTAPEALREKKFSTKSDVWSFGILLWEIYS 194

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 42.2 bits (99), Expect = 4e-04
 Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 29/141 (20%)

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L +V  +H   +IH D+K  NILL S   VK+ D+ F               K  A  
Sbjct: 151 QVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGF--------------SKMYAAT 196

Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
           + D    TF          T +Y APE+     ++   D++S+G +L EL + +  F   
Sbjct: 197 VSDDVGRTF--------CGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDG- 247

Query: 322 ENLEHLAMMERVLG----PLP 338
           EN+E +  M + L     PLP
Sbjct: 248 ENMEEV--MHKTLAGRYDPLP 266

Length = 496

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 41.7 bits (98), Expect = 4e-04
 Identities = 50/228 (21%), Positives = 93/228 (40%), Gaps = 37/228 (16%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGG 152
           L  +G+G+FG+V+        EL AIKI++      +   E  M+E  VL    +     
Sbjct: 5   LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGK----P 60

Query: 153 TRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               Q+ + F   + +  V E +  G  +Y   +   ++  P  +      ++   + F+
Sbjct: 61  PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKE-PHAVF--YAAEIAIGLFFL 117

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H   +I+ DLK +N++L +  ++K+ D+     +   G   +                TF
Sbjct: 118 HSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTR----------------TF 161

Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
                     T  Y APE+I    +    D W+ G +L E+ +G+  F
Sbjct: 162 --------CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPF 201

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 41.6 bits (97), Expect = 4e-04
 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 28/168 (16%)

Query: 100 MGEGTFGQVVECFDNEK--KELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGTR 154
           +GEG FGQV++    +   +   AIK ++   S + +R+ A  E++VL +L  H      
Sbjct: 3   IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG-ELEVLCKLGHH----PN 57

Query: 155 CVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELG-------RQLLE 205
            + +    ++R ++ +  E   P  +L DFLRK+                     +QLL 
Sbjct: 58  IINLLGACEHRGYLYLAIE-YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 116

Query: 206 -------SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246
                   + ++ + + IH DL   NIL+      K+ D+  LSR  +
Sbjct: 117 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG-LSRGQE 163

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 64/227 (28%), Positives = 91/227 (40%), Gaps = 48/227 (21%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD-----IG 151
           K+G+G FG V +       E VA+K  RS      +   + E ++L++   H      IG
Sbjct: 2   KIGKGNFGDVYKGVLKGNTE-VAVKTCRSTLPPDLKRKFLQEAEILKQY-DHPNIVKLIG 59

Query: 152 GTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              CVQ       +  I IV E   G SL  FLRK   R      V++L +  L++ A M
Sbjct: 60  --VCVQ-------KQPIYIVMELVPGGSLLTFLRKKKNRL----TVKKLLQMSLDAAAGM 106

Query: 211 HELR---LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
             L     IH DL   N L+     +K+ D+  +SR  + G Y      S  +K I    
Sbjct: 107 EYLESKNCIHRDLAARNCLVGENNVLKISDFG-MSREEEGGIY----TVSDGLKQIPIKW 161

Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           T                 APE +    +    D+WS G +L E  S 
Sbjct: 162 T-----------------APEALNYGRYTSESDVWSYGILLWETFSL 191

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 41.5 bits (97), Expect = 7e-04
 Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 25/133 (18%)

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q++ ++  +H  +++H DLK  NI L+    +K+ D+ F  + S   S            
Sbjct: 177 QIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS------------ 224

Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
            +D  S+            T +Y APE+     ++   D+WS+G IL EL +    F+  
Sbjct: 225 -LDVASS---------FCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP 274

Query: 322 ENLEHLAMMERVL 334
              E   +M++VL
Sbjct: 275 SQRE---IMQQVL 284

Length = 478

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 23/133 (17%)

Query: 179 LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           L D++R+N  R    DL+     Q+ + ++++ E+RL+H DL   N+L+ S  +VK+ D+
Sbjct: 95  LLDYVRENKDRIGSQDLL-NWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDF 153

Query: 239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP 298
                                 +L+D   T + H D   V     + A E IL   + + 
Sbjct: 154 GL-------------------ARLLDIDETEY-HADGGKV--PIKWMALESILHRRFTHQ 191

Query: 299 CDLWSVGCILVEL 311
            D+WS G  + EL
Sbjct: 192 SDVWSYGVTVWEL 204

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)

Query: 168 ICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI 225
           + IV E   LG  L  +L+ N Y S  +  +     QL  ++A++   R +H D+   N+
Sbjct: 81  VWIVMELAPLG-ELRSYLQVNKY-SLDLASLILYSYQLSTALAYLESKRFVHRDIAARNV 138

Query: 226 LLVSAEYVKVPDYKFLSRSSKDGSYFK 252
           L+ S + VK+ D+  LSR  +D SY+K
Sbjct: 139 LVSSPDCVKLGDFG-LSRYLEDESYYK 164

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 40.9 bits (96), Expect = 0.001
 Identities = 56/267 (20%), Positives = 95/267 (35%), Gaps = 104/267 (38%)

Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
           +++ + RQ+L ++  +H   ++H D+KP+NI+                            
Sbjct: 256 IIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFS-------------------------- 289

Query: 255 PKSSAIKLIDFGSTT-----FEHQDHSYVVSTRHYRAPE---------------VILGLG 294
             S + K+ID G+         +    +++  R Y APE               V   L 
Sbjct: 290 EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPR-YAAPEQYIMSTQTPSAPSAPVATALS 348

Query: 295 ---W--NYP--CDLWSVGCILVELC-----SGEALFQTHENLEH----LAMMERVLGPLP 338
              W  N P   D++S G I +++      S   L Q +  L+     L    +++ P  
Sbjct: 349 PVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEP-- 406

Query: 339 HHMVIRADRRAEKYFRRGAR-LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 397
                    RA    RRG   LD   GA         W                     +
Sbjct: 407 ---------RASPDLRRGFEVLDLDGGAG--------W---------------------E 428

Query: 398 LLQGLLRYDPAERLKAREALRHPFFTR 424
           LL+ ++R+   +R+ A+ AL HP+F R
Sbjct: 429 LLKSMMRFKGRQRISAKAALAHPYFDR 455

Length = 566

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 54/233 (23%), Positives = 91/233 (39%), Gaps = 34/233 (14%)

Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
           +G G FG+V          K+  VAIK ++     K R+  + E  ++ + + H+I    
Sbjct: 13  IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNI---- 68

Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYD-FLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            +++           I+ E +     D +LR +        LV  L R +   + ++ ++
Sbjct: 69  -IRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGML-RGIAAGMKYLSDM 126

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             +H DL   NIL+ S    KV D+  LSR                  L D    T+   
Sbjct: 127 NYVHRDLAARNILVNSNLECKVSDFG-LSRV-----------------LEDDPEGTYTTS 168

Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325
                +    + APE I    +    D+WS G ++ E+ S GE  +    N E
Sbjct: 169 GGKIPI---RWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE 218

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 40.6 bits (95), Expect = 0.001
 Identities = 36/148 (24%), Positives = 69/148 (46%), Gaps = 12/148 (8%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMI-EIDVLQRLARHDIG 151
           I+  +  G FG+V         +L A+K+V+    INK     +  E D L  L++    
Sbjct: 8   IVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALA-LSKSPF- 65

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               V +       N++ +V E L G  +   L    Y  F  ++  +   ++  ++ ++
Sbjct: 66  ---IVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGY--FDEEMAVKYISEVALALDYL 120

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H   +IH DLKP+N+L+ +  ++K+ D+
Sbjct: 121 HRHGIIHRDLKPDNMLISNEGHIKLTDF 148

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 57/248 (22%), Positives = 99/248 (39%), Gaps = 42/248 (16%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     VQ+
Sbjct: 13  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL-----VQL 67

Query: 159 RNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                      I+ E +   +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH
Sbjct: 68  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 127

Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL   N L+     VKV D+  LSR     +Y  +      IK                
Sbjct: 128 RDLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK---------------- 170

Query: 278 VVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCS-------GEALFQTHENLEHL 327
                 + APE    L +N      D+W+ G +L E+ +       G  L Q +E LE  
Sbjct: 171 ------WTAPE---SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG 221

Query: 328 AMMERVLG 335
             MER  G
Sbjct: 222 YRMERPEG 229

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 38.9 bits (91), Expect = 0.003
 Identities = 38/141 (26%), Positives = 56/141 (39%), Gaps = 28/141 (19%)

Query: 178 SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           SL  FLR+N  +     LV  L R +   + ++ E+  +H DL   NIL+ S    KV D
Sbjct: 91  SLDKFLRENDGKFTVGQLVGML-RGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSD 149

Query: 238 YKFLSR--SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW 295
           +  LSR     + +Y     K                           + APE I    +
Sbjct: 150 FG-LSRRLEDSEATYTTKGGKIPI-----------------------RWTAPEAIAYRKF 185

Query: 296 NYPCDLWSVGCILVELCS-GE 315
               D+WS G ++ E+ S GE
Sbjct: 186 TSASDVWSFGIVMWEVMSYGE 206

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 8/67 (11%)

Query: 162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL 220
            D  N I IV E + G  L D +  NS     ++L RE+GR     V  +H   +IH DL
Sbjct: 69  VDPENFI-IVMEYIEGEPLKDLI--NSNGMEELELSREIGRL----VGKLHSAGIIHGDL 121

Query: 221 KPENILL 227
              N++L
Sbjct: 122 TTSNMIL 128

Length = 211

>gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional

 Score = 38.8 bits (90), Expect = 0.004
 Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 37/185 (20%)

Query: 95  KILSKMGEGTFGQV--VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           KI   +G G FG V   +C  +      A+  + ++    E  ++E  V   +   D   
Sbjct: 15  KIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLEN--ETIVMETLVYNNIYDID--- 69

Query: 153 TRCVQIRNWFDYRN--HI-------C------------IVFEKLGPSLYDFLRKNSYRSF 191
               +I  W +  N  H+       C            I+ EKL  +  +  ++   +  
Sbjct: 70  ----KIALWKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKR--IKCK 123

Query: 192 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR---SSKDG 248
              L++ + + +L ++ ++HE  + H D+KPENI++       + DY   S      K  
Sbjct: 124 NKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHI 183

Query: 249 SYFKN 253
            Y K 
Sbjct: 184 EYSKE 188

Length = 294

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	438
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG1290	590	consensus Serine/threonine protein kinase [Signal	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
PTZ00284	467	protein kinase; Provisional	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
PLN03224	507	probable serine/threonine protein kinase; Provisio	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG1167	418	consensus Serine/threonine protein kinase of the C	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
KOG1027	903	consensus Serine/threonine protein kinase and endo	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG1152	772	consensus Signal transduction serine/threonine kin	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG0576	829	consensus Mitogen-activated protein kinase kinase	100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.97
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.97
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.97
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.96
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.96
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.96
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.96
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.94
PRK09188	365	serine/threonine protein kinase; Provisional	99.94
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.93
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.93
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.93
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.91
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.91
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.9
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.9
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.9
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.89
PRK10345	210	hypothetical protein; Provisional	99.89
PRK12274	218	serine/threonine protein kinase; Provisional	99.88
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.88
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.84
smart00090	237	RIO RIO-like kinase.	99.84
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.84
PRK14879	211	serine/threonine protein kinase; Provisional	99.81
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.78
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.78
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.75
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.75
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.74
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.73
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.71
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.71
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.67
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.65
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.54
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.54
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.51
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.5
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.48
KOG1243	690	consensus Protein kinase [General function predict	99.42
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.4
KOG3087	229	consensus Serine/threonine protein kinase [General	99.34
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.24
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.23
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.21
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.14
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.13
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.11
PRK09902	216	hypothetical protein; Provisional	98.99
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.92
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.83
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.78
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.77
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.65
PF01636	239	APH: Phosphotransferase enzyme family This family	98.63
COG4248	637	Uncharacterized protein with protein kinase and he	98.58
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.54
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.53
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.51
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	98.46
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.29
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.23
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.19
KOG2270	520	consensus Serine/threonine protein kinase involved	98.18
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.17
PLN02876	822	acyl-CoA dehydrogenase	98.15
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	98.07
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.05
KOG1093	725	consensus Predicted protein kinase (contains TBC a	97.93
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.85
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.81
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.78
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.75
PRK05231	319	homoserine kinase; Provisional	97.63
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.59
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.52
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	97.38
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.35
PLN02236	344	choline kinase	97.33
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	97.24
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.15
PRK10593	297	hypothetical protein; Provisional	97.08
PRK12396	409	5-methylribose kinase; Reviewed	97.03
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	97.03
PLN02756	418	S-methyl-5-thioribose kinase	96.84
PRK11768	325	serine/threonine protein kinase; Provisional	96.8
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.76
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	96.72
PTZ00384	383	choline kinase; Provisional	96.43
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	96.39
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	96.24
PTZ00296	442	choline kinase; Provisional	95.92
KOG1236	565	consensus Predicted unusual protein kinase [Genera	95.85
COG2334	331	Putative homoserine kinase type II (protein kinase	95.85
PRK06148	1013	hypothetical protein; Provisional	95.79
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	95.41
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	95.26
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	95.0

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-65  Score=461.44  Aligned_cols=350  Identities=60%  Similarity=1.035  Sum_probs=311.3

Q ss_pred             CCCCCCCCCCCCCCCceeeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHH
Q 013678           66 PRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL  145 (438)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l  145 (438)
                      .+...+++.+++..|+|++..++.+..||.++..||+|.||.|..+.+..++..||||+++.....++..+.|+++|++|
T Consensus        63 ~~~~~~~~~~dD~dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki  142 (415)
T KOG0671|consen   63 ARLESRPGRPDDKDGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKI  142 (415)
T ss_pred             ccccCCCCCCCCCCceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            45667788889999999999999999999999999999999999999999999999999999899999999999999999


Q ss_pred             HhcC-CCCcceEEecceeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCc
Q 013678          146 ARHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN  224 (438)
Q Consensus       146 ~~~~-i~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  224 (438)
                      .+.. -+...|+++.+||+..++.|||+|.+|.|+++++..++...++...++.+++||+.+++|||+.+++|.||||+|
T Consensus       143 ~~~DP~g~~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPEN  222 (415)
T KOG0671|consen  143 NESDPNGKFRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPEN  222 (415)
T ss_pred             HhcCCCCceEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChhe
Confidence            7765 344678999999999999999999999999999999888899999999999999999999999999999999999


Q ss_pred             EEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHH
Q 013678          225 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSV  304 (438)
Q Consensus       225 Ili~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  304 (438)
                      ||+.+....+..+.+..       ..+....++..++++|||.|+...+..++.+.|..|+|||++++.+++.++||||+
T Consensus       223 ILfvss~~~~~~~~k~~-------~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSi  295 (415)
T KOG0671|consen  223 ILFVSSEYFKTYNPKKK-------VCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSI  295 (415)
T ss_pred             EEEeccceEEEeccCCc-------cceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceee
Confidence            99988877766554432       11122345668999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhh
Q 013678          305 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  384 (438)
Q Consensus       305 G~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (438)
                      ||||+|+++|...|+..++.+++++|++++|++|..+..+..  .+++|..+ +++|++....+. .+..++..+.....
T Consensus       296 GCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~--~~Kyf~~~-rldw~e~~~~~~-~k~v~~~ckpl~~~  371 (415)
T KOG0671|consen  296 GCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTR--KEKYFRRG-RLDWPEVSSKGK-SKYVFEPCKPLKKY  371 (415)
T ss_pred             eeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhh--hHhhhhcc-cccCcccccccc-chhhhcCCccHHHH
Confidence            999999999999999999999999999999999999987765  77888888 999999887775 44555555555555


Q ss_pred             hhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       385 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +...+....++.|||++||.+||.+|+|+.|+|.||||+.-.
T Consensus       372 ~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~  413 (415)
T KOG0671|consen  372 MLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT  413 (415)
T ss_pred             hccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence            555566667899999999999999999999999999998753

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=8.1e-61  Score=462.31  Aligned_cols=324  Identities=39%  Similarity=0.695  Sum_probs=272.9

Q ss_pred             CCCCCCceeeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHH-hcCCCCc
Q 013678           75 PDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGT  153 (438)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~  153 (438)
                      .++.++.|.+..++.+..||.|++.||+|+||.|.+|.+..|++.||||++++......+...|+.+|..|+ |.+-...
T Consensus       169 ~~~~~~dY~~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~  248 (586)
T KOG0667|consen  169 FDDEDGDYQLVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKY  248 (586)
T ss_pred             CCCCCCceeEEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCe
Confidence            445667799999999999999999999999999999999999999999999998888899999999999999 6666678


Q ss_pred             ceEEecceeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccc
Q 013678          154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  233 (438)
Q Consensus       154 ~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~  233 (438)
                      |+|+++++|...+|+|||+|.+..+|+++++.+....++...++.++.||+.||.+||+.||||+||||+|||+...+  
T Consensus       249 n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~--  326 (586)
T KOG0667|consen  249 NIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPK--  326 (586)
T ss_pred             eEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCC--
Confidence            999999999999999999999999999999998888899999999999999999999999999999999999997643  


Q ss_pred             ccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh
Q 013678          234 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  313 (438)
Q Consensus       234 kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt  313 (438)
                                             ...+||+|||+|.+.....-+.+.+..|+|||+++|.+|+.+.||||||||++||++
T Consensus       327 -----------------------r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~t  383 (586)
T KOG0667|consen  327 -----------------------RSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFT  383 (586)
T ss_pred             -----------------------cCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhc
Confidence                                   448999999999998887778899999999999999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcC-CCcccCCCCCC-----ChhhHHHHHHhc----cch--
Q 013678          314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR-GARLDWPDGAT-----SRDSMRAVWKLL----RLP--  381 (438)
Q Consensus       314 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~----~~~--  381 (438)
                      |.+.|.+.+..+++..|.+++|.+|..++..+.+. .+||.+ ...........     .....+......    +.+  
T Consensus       384 G~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~-~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~  462 (586)
T KOG0667|consen  384 GEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKA-HKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPG  462 (586)
T ss_pred             CccccCCCCHHHHHHHHHHHhCCCCHHHHHhcccc-ceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCC
Confidence            99999999999999999999998888887776554 555555 32222111111     001111111111    111  


Q ss_pred             --hhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          382 --NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       382 --~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                        .............+.|||++||.+||.+|+|+.++|+||||++
T Consensus       463 ~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~  507 (586)
T KOG0667|consen  463 SRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTG  507 (586)
T ss_pred             CcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccc
Confidence              1111112234567899999999999999999999999999994

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.2e-60  Score=432.55  Aligned_cols=261  Identities=30%  Similarity=0.472  Sum_probs=221.1

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh--------hHHHHHHHHHHHHHHHhcCCCCcceEEecc
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--------YREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~  160 (438)
                      .+.+.|.+.+.||+|+||.|-+|..+.||+.||||++++...        ......+|+++|++|+||+|     |++++
T Consensus       169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~I-----V~~~d  243 (475)
T KOG0615|consen  169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNI-----VRIKD  243 (475)
T ss_pred             hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCE-----EEEee
Confidence            466789999999999999999999999999999999975221        22345799999999999988     99999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                      +|+..+..||||||+ ||+|.+++-.++  .+.+...+.+++||+.||.|||++||+||||||+|||+..+.        
T Consensus       244 ~f~~~ds~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~--------  313 (475)
T KOG0615|consen  244 FFEVPDSSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDA--------  313 (475)
T ss_pred             eeecCCceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCC--------
Confidence            999999999999999 999999998876  788999999999999999999999999999999999997642        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccC--CCCcccccCCCcchhHHHhCCC---CCcchhHHHHHHHHHHHHhC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~elltg  314 (438)
                                      .+..+||+|||+|+..+  ....+.+||+.|.|||++.+..   +..++||||+||+||-+++|
T Consensus       314 ----------------e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG  377 (475)
T KOG0615|consen  314 ----------------EDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSG  377 (475)
T ss_pred             ----------------cceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEecc
Confidence                            45679999999999885  3456789999999999998765   34588999999999999999


Q ss_pred             CCCCCCCChHH-HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchh
Q 013678          315 EALFQTHENLE-HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  393 (438)
Q Consensus       315 ~~pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (438)
                      .+||.+..... ...+|.+....+                                              ....+..+++
T Consensus       378 ~pPFS~~~~~~sl~eQI~~G~y~f----------------------------------------------~p~~w~~Ise  411 (475)
T KOG0615|consen  378 YPPFSEEYTDPSLKEQILKGRYAF----------------------------------------------GPLQWDRISE  411 (475)
T ss_pred             CCCcccccCCccHHHHHhcCcccc----------------------------------------------cChhhhhhhH
Confidence            99998754433 444443321111                                              1122346688


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +.++||.+||..||++|||+.|+|+||||+...
T Consensus       412 ea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  412 EALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             HHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            999999999999999999999999999999654

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.6e-58  Score=438.52  Aligned_cols=254  Identities=31%  Similarity=0.510  Sum_probs=229.0

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec----chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      .+|...+.||+|||+.||.+++..+|+.||+|++.+    ....++...+||+|.+.|+|+||     |+++++|++.++
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnI-----V~f~~~FEDs~n   92 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNI-----VQFYHFFEDSNN   92 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcE-----EeeeeEeecCCc
Confidence            689999999999999999999999999999999986    45677889999999999999988     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|||+|+| .++|..+++++.  .++|.+++.+++||+.||.|||+++|+|||||..|+|+++                 
T Consensus        93 VYivLELC~~~sL~el~Krrk--~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~-----------------  153 (592)
T KOG0575|consen   93 VYIVLELCHRGSLMELLKRRK--PLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNE-----------------  153 (592)
T ss_pred             eEEEEEecCCccHHHHHHhcC--CCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecC-----------------
Confidence            99999999 999999998654  8999999999999999999999999999999999999954                 


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                +.++||+|||+|....   +...+.+||+.|+|||++....++..+||||+||+||.||.|++||...+-
T Consensus       154 ----------~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v  223 (592)
T KOG0575|consen  154 ----------NMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV  223 (592)
T ss_pred             ----------cCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH
Confidence                      4578999999998765   455678999999999999999999999999999999999999999998888


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .+.+..|...-..+|                                                  ...+.++++||.+||
T Consensus       224 kety~~Ik~~~Y~~P--------------------------------------------------~~ls~~A~dLI~~lL  253 (592)
T KOG0575|consen  224 KETYNKIKLNEYSMP--------------------------------------------------SHLSAEAKDLIRKLL  253 (592)
T ss_pred             HHHHHHHHhcCcccc--------------------------------------------------cccCHHHHHHHHHHh
Confidence            888877766544333                                                  245778999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          404 RYDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      +.||.+|||+++||.|+||++.....
T Consensus       254 ~~~P~~Rpsl~~vL~h~Ff~~g~~p~  279 (592)
T KOG0575|consen  254 RPNPSERPSLDEVLDHPFFKSGFTPA  279 (592)
T ss_pred             cCCcccCCCHHHHhcCHhhhCCCcCC
Confidence            99999999999999999997765443

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-59  Score=432.70  Aligned_cols=291  Identities=30%  Similarity=0.509  Sum_probs=240.8

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHH--HHHHHHHHHHH-hcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA--MIEIDVLQRLA-RHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~--~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+.+||.++++||.|+||.||+|+.+.+++.||||.+++.-...++.  .||+..|++|+ |+||     +++.+++.+.
T Consensus         7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpni-----ikL~Evi~d~   81 (538)
T KOG0661|consen    7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNI-----IKLKEVIRDN   81 (538)
T ss_pred             hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcc-----hhhHHHhhcc
Confidence            35589999999999999999999999999999999997644333333  58999999999 8877     9999999888


Q ss_pred             C-eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 N-HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~-~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      + ++|+|||||..+|+++++.+ ++.|++..++.|++||++||+|+|.+|+.||||||+||||..               
T Consensus        82 ~~~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~---------------  145 (538)
T KOG0661|consen   82 DRILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG---------------  145 (538)
T ss_pred             CceEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc---------------
Confidence            7 99999999999999999987 589999999999999999999999999999999999999953               


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                  +..+||+|||+|+......  +.++.|.+|+|||+++.. -|+.+.||||+|||++|+.+-++.|.|.
T Consensus       146 ------------~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~  213 (538)
T KOG0661|consen  146 ------------NDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGA  213 (538)
T ss_pred             ------------cceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCC
Confidence                        3368999999998876554  447999999999998865 5899999999999999999999999999


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      ++.+++.+|.+++|.+-...+........     .-.+.+|...               +.......+..+.++.+||.+
T Consensus       214 sE~Dqi~KIc~VLGtP~~~~~~eg~~La~-----~mnf~~P~~~---------------~~~l~~L~p~~s~~~~~li~~  273 (538)
T KOG0661|consen  214 SEIDQIYKICEVLGTPDKDSWPEGYNLAS-----AMNFRFPQVK---------------PSPLKDLLPNASSEAASLIER  273 (538)
T ss_pred             cHHHHHHHHHHHhCCCccccchhHHHHHH-----HhccCCCcCC---------------CCChHHhCcccCHHHHHHHHH
Confidence            99999999999999887554433211111     0111222111               111222334578899999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCCCCceee
Q 013678          402 LLRYDPAERLKAREALRHPFFTRDVRRPTLL  432 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f~~~~~~~~~~  432 (438)
                      ||.|||.+||||+|+|+||||+........+
T Consensus       274 ll~WDP~kRpTA~~al~~pffq~~~~~~~~a  304 (538)
T KOG0661|consen  274 LLAWDPDKRPTASQALQHPFFQVGRASGSSA  304 (538)
T ss_pred             HhcCCCccCccHHHHhcCccccccccccccc
Confidence            9999999999999999999999876654433

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=8.4e-58  Score=401.25  Aligned_cols=281  Identities=30%  Similarity=0.580  Sum_probs=231.9

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ++|+.+.++|+|+||+||+|+++.||+.||||++..+   ....+.+++|++.|++|.|+|+     |.++++|.....+
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NL-----VnLiEVFrrkrkl   76 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENL-----VNLIEVFRRKRKL   76 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchH-----HHHHHHHHhccee
Confidence            4688999999999999999999999999999998643   3456788999999999999998     9999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||+|||..++.+-+.+.. ..++.+.++.|++|++.|+.|+|+++||||||||+||||+.+|                 
T Consensus        77 hLVFE~~dhTvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~g-----------------  138 (396)
T KOG0593|consen   77 HLVFEYCDHTVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNG-----------------  138 (396)
T ss_pred             EEEeeecchHHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCC-----------------
Confidence            9999999888888888776 4699999999999999999999999999999999999998766                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                .+||||||+|+....   ..+..+.|.+|+|||.+.+ ..|+.++||||+||++.||++|.+.|.+.++.
T Consensus       139 ----------vvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDi  208 (396)
T KOG0593|consen  139 ----------VVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDI  208 (396)
T ss_pred             ----------cEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchH
Confidence                      566677777665542   2234689999999999998 57999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +++..|...+|.+++....-.  ....+|..   ...|+...              +.......+..+.-+.||+++||.
T Consensus       209 DQLy~I~ktLG~L~prhq~iF--~~N~~F~G---v~lP~~~~--------------~epLe~k~p~~s~~~ld~~k~cL~  269 (396)
T KOG0593|consen  209 DQLYLIRKTLGNLIPRHQSIF--SSNPFFHG---VRLPEPEH--------------PEPLERKYPKISNVLLDLLKKCLK  269 (396)
T ss_pred             HHHHHHHHHHcccCHHHHHHh--ccCCceee---eecCCCCC--------------ccchhhhcccchHHHHHHHHHHhc
Confidence            999999999999887543211  11112211   11222111              111112234556688999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~  424 (438)
                      .||++|++.+|+|.|+||.+
T Consensus       270 ~dP~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  270 MDPDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             CCccccccHHHHhcChHHHH
Confidence            99999999999999999954

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-57  Score=410.67  Aligned_cols=257  Identities=25%  Similarity=0.433  Sum_probs=220.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEee--cchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC-eE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN-HI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~-~~  168 (438)
                      ...+.++.||+|..|+||+++++.|++.+|+|++.  .....++++.+|+++++..+|++|     |.+|+.|.+++ .+
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyI-----V~~ygaF~~~~~~i  153 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYI-----VGFYGAFYSNGEEI  153 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCe-----eeEeEEEEeCCceE
Confidence            45678899999999999999999999999999994  345677889999999999988877     99999999988 59


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|+|||| +|+|.+++...+  .+++.....++.++++||.|||+ ++||||||||+|||++..|               
T Consensus       154 sI~mEYMDgGSLd~~~k~~g--~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskG---------------  216 (364)
T KOG0581|consen  154 SICMEYMDGGSLDDILKRVG--RIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKG---------------  216 (364)
T ss_pred             EeehhhcCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCC---------------
Confidence            9999999 999999998764  79999999999999999999995 9999999999999997766               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCC-CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC--Ch
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH--EN  323 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~--~~  323 (438)
                                  .+||||||.+...-. ...+++||..|||||.+.+..|+.++||||||++++|+++|+.||...  ..
T Consensus       217 ------------eVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~  284 (364)
T KOG0581|consen  217 ------------EVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPY  284 (364)
T ss_pred             ------------CEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCC
Confidence                        688888888876543 446789999999999999999999999999999999999999999774  23


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccC-CchhHHHHHHHHc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD-HSAGDLIDLLQGL  402 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ll~~~  402 (438)
                      ...+..+..+...+|+.                                              .+. .+++++++||..|
T Consensus       285 ~~~~~Ll~~Iv~~ppP~----------------------------------------------lP~~~fS~ef~~FV~~C  318 (364)
T KOG0581|consen  285 LDIFELLCAIVDEPPPR----------------------------------------------LPEGEFSPEFRSFVSCC  318 (364)
T ss_pred             CCHHHHHHHHhcCCCCC----------------------------------------------CCcccCCHHHHHHHHHH
Confidence            34444455544433321                                              112 3688999999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      |++||.+|+|++|+++|||+++....
T Consensus       319 L~Kdp~~R~s~~qLl~Hpfi~~~~~~  344 (364)
T KOG0581|consen  319 LRKDPSERPSAKQLLQHPFIKKFEDP  344 (364)
T ss_pred             hcCCcccCCCHHHHhcCHHHhhcccc
Confidence            99999999999999999999976543

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=2.4e-56  Score=385.63  Aligned_cols=278  Identities=30%  Similarity=0.543  Sum_probs=235.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh---hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .||..+++||+|.||.||+|++..+|+.||||+++..+.   ....+.+||+.|+.++|+||     +.++++|.+.+.+
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nI-----i~LiD~F~~~~~l   76 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNI-----IELIDVFPHKSNL   76 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcch-----hhhhhhccCCCce
Confidence            578999999999999999999999999999999975432   35678899999999999988     9999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      .||+||+..+|+..++.+. ..++...++.++.++++||+|||++.|+||||||.|+||+++|                 
T Consensus        77 ~lVfEfm~tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g-----------------  138 (318)
T KOG0659|consen   77 SLVFEFMPTDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDG-----------------  138 (318)
T ss_pred             EEEEEeccccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCC-----------------
Confidence            9999999999999998765 6799999999999999999999999999999999999998777                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                .+||+|||+|+......   ...+-|.+|+|||++.|.. |+..+||||.|||+.||+.|.+.|.+.++.
T Consensus       139 ----------~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi  208 (318)
T KOG0659|consen  139 ----------QLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI  208 (318)
T ss_pred             ----------cEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH
Confidence                      56677777776654332   2247899999999999874 999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhh-hhccCCchhHHHHHHHHcc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI-MQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ll~~~L  403 (438)
                      +++..|.+.+|++-++                   .||+...-++..+-.    ..+... .......+.++.||+.+||
T Consensus       209 dQL~~If~~LGTP~~~-------------------~WP~~~~lpdY~~~~----~~P~~~~~~lf~aas~d~ldLl~~m~  265 (318)
T KOG0659|consen  209 DQLSKIFRALGTPTPD-------------------QWPEMTSLPDYVKIQ----QFPKPPLNNLFPAASSDALDLLSKML  265 (318)
T ss_pred             HHHHHHHHHcCCCCcc-------------------cCccccccccHHHHh----cCCCCccccccccccHHHHHHHHhhh
Confidence            9999999999987643                   455544443332221    111111 1145566778899999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCC
Q 013678          404 RYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .+||.+|+|+.|+|+|+||++.
T Consensus       266 ~ynP~~Rita~qaL~~~yf~~~  287 (318)
T KOG0659|consen  266 TYNPKKRITASQALKHPYFKSL  287 (318)
T ss_pred             ccCchhcccHHHHhcchhhhcC
Confidence            9999999999999999999974

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-56  Score=401.60  Aligned_cols=253  Identities=30%  Similarity=0.494  Sum_probs=220.1

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      .+.|++++.||+|+||+||+++.+.+++.||+|++++..    ...+....|..||..++||.|     |.++..|++.+
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFi-----v~l~ysFQt~~   98 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFI-----VKLIYSFQTEE   98 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcE-----eeeEEecccCC
Confidence            367899999999999999999999999999999998633    345677889999999988888     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      .+|||+||+ ||.|..+|++.+  .+++..++.|+..|+.||.|||++|||||||||+|||++.+|              
T Consensus        99 kLylVld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~G--------------  162 (357)
T KOG0598|consen   99 KLYLVLDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQG--------------  162 (357)
T ss_pred             eEEEEEeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCC--------------
Confidence            999999999 999999999876  899999999999999999999999999999999999998777              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCccc---CCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFE---HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                   +++|+|||+++..   +....+++||+.|||||++.+.+|+.++|+||||+++|||++|.+||.+.+
T Consensus       163 -------------Hi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~  229 (357)
T KOG0598|consen  163 -------------HIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED  229 (357)
T ss_pred             -------------cEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc
Confidence                         4566666666532   223445799999999999999999999999999999999999999999998


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      .......|.+.....+                                                 +.-.+.++++||+++
T Consensus       230 ~~~~~~~I~~~k~~~~-------------------------------------------------p~~ls~~ardll~~L  260 (357)
T KOG0598|consen  230 VKKMYDKILKGKLPLP-------------------------------------------------PGYLSEEARDLLKKL  260 (357)
T ss_pred             HHHHHHHHhcCcCCCC-------------------------------------------------CccCCHHHHHHHHHH
Confidence            8888777765431111                                                 122567899999999


Q ss_pred             cccCCCCCC----CHHHHhcCCCCCCCC
Q 013678          403 LRYDPAERL----KAREALRHPFFTRDV  426 (438)
Q Consensus       403 L~~dP~~Rp----ta~ell~hp~f~~~~  426 (438)
                      |..||++|.    .+.+|-+||||.+-.
T Consensus       261 L~rdp~~RLg~~~d~~~ik~HpfF~~in  288 (357)
T KOG0598|consen  261 LKRDPRQRLGGPGDAEEIKRHPFFKGIN  288 (357)
T ss_pred             hccCHHHhcCCCCChHHhhcCcccccCC
Confidence            999999996    699999999998753

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.1e-56  Score=414.12  Aligned_cols=286  Identities=30%  Similarity=0.476  Sum_probs=236.4

Q ss_pred             cCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           86 IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      .+....+.|+.+++||+|.||.||+|++..+|+.||+|+++...   .......+||.||++|.|+||     +++.+..
T Consensus       111 w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNI-----ikL~eiv  185 (560)
T KOG0600|consen  111 WGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNI-----IKLEEIV  185 (560)
T ss_pred             ccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcc-----cceeeEE
Confidence            34455678999999999999999999999999999999997543   445677899999999999988     9999988


Q ss_pred             ccC--CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          163 DYR--NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       163 ~~~--~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                      ...  ..+|||+|||..||..++.... -.|++.+++.|++||+.||+|||++||+|||||.+||||+.+|         
T Consensus       186 t~~~~~siYlVFeYMdhDL~GLl~~p~-vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G---------  255 (560)
T KOG0600|consen  186 TSKLSGSIYLVFEYMDHDLSGLLSSPG-VKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNG---------  255 (560)
T ss_pred             EecCCceEEEEEecccchhhhhhcCCC-cccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCC---------
Confidence            765  6999999999999999987643 5799999999999999999999999999999999999998777         


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCC
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~  315 (438)
                                        .+||+|||+|++....    .+..+-|.+|+|||+++|. .|+.++|+||.||||.||++|+
T Consensus       256 ------------------~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gk  317 (560)
T KOG0600|consen  256 ------------------VLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGK  317 (560)
T ss_pred             ------------------CEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCC
Confidence                              5677777777754322    3446889999999999987 4999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      +.|++.++.+++..|.+++|.+.+..|...            .+.+.......         ..+.....+.....+...
T Consensus       318 PI~~G~tEveQl~kIfklcGSP~e~~W~~~------------kLP~~~~~kp~---------~~y~r~l~E~~~~~~~~~  376 (560)
T KOG0600|consen  318 PILQGRTEVEQLHKIFKLCGSPTEDYWPVS------------KLPHATIFKPQ---------QPYKRRLRETFKDFPASA  376 (560)
T ss_pred             CCcCCccHHHHHHHHHHHhCCCChhccccc------------cCCcccccCCC---------CcccchHHHHhccCCHHH
Confidence            999999999999999999999988764411            11111110000         111222233355667889


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          396 IDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .+|+..||..||.+|.||.++|+|+||+..
T Consensus       377 l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~  406 (560)
T KOG0600|consen  377 LDLLEKLLSLDPDKRGTASSALQSEYFTTE  406 (560)
T ss_pred             HHHHHHHhccCccccccHHHHhcCcccccC
Confidence            999999999999999999999999999443

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-54  Score=392.01  Aligned_cols=283  Identities=27%  Similarity=0.489  Sum_probs=236.2

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc-
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-  164 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-  164 (438)
                      .+..+|..++.||+|+||.|+.|.++.+|+.||||++..   .....+...+|+++|+.++|+||     +.+.+++.. 
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNI-----i~l~di~~p~   93 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENI-----IGLLDIFRPP   93 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCc-----ceEEeecccc
Confidence            456778888999999999999999999999999999862   34456778899999999999988     888888764 


Q ss_pred             ----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          165 ----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       165 ----~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                          -+.+|+|+|+|+.+|.+.++.+.  .++...+..+++||++||+|+|+.||+||||||+|+|++.+.         
T Consensus        94 ~~~~f~DvYiV~elMetDL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c---------  162 (359)
T KOG0660|consen   94 SRDKFNDVYLVFELMETDLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADC---------  162 (359)
T ss_pred             cccccceeEEehhHHhhHHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCC---------
Confidence                35799999999999999998764  699999999999999999999999999999999999996544         


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccC-----CCCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhC
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH-----QDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg  314 (438)
                                        .+||+|||+|+...     ...+..+.|.+|+|||++... .|+.++||||+||||.||++|
T Consensus       163 ------------------~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~g  224 (359)
T KOG0660|consen  163 ------------------DLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTG  224 (359)
T ss_pred             ------------------CEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcC
Confidence                              56888888887763     233557889999999998764 699999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHh-hhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchh
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRAD-RRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  393 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (438)
                      ++.|.|.+..+++..|...+|.++++.+.... .....|.......                    -........+..++
T Consensus       225 kplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~--------------------p~~~f~~~fp~a~p  284 (359)
T KOG0660|consen  225 KPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQI--------------------PKQPFSSIFPNANP  284 (359)
T ss_pred             CCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCC--------------------CCCCHHHHcCCCCH
Confidence            99999999999999999999999888776554 2222233221100                    01112234457788


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .+.|||++||.+||.+|+|++|+|+||||..-
T Consensus       285 ~AidLlekmL~fdP~kRita~eAL~hPYl~~~  316 (359)
T KOG0660|consen  285 LAIDLLEKMLVFDPKKRITAEEALAHPYLAPY  316 (359)
T ss_pred             HHHHHHHHHhccCccccCCHHHHhcChhhhhh
Confidence            99999999999999999999999999999763

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-54  Score=406.44  Aligned_cols=269  Identities=26%  Similarity=0.379  Sum_probs=223.4

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ..+|.+.+.||+|+|++|++|+++.+++.||||++.+.-    ...+-+.+|-.+|.+|.    +||.|++|+-.|++..
T Consensus        72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~----~hPgivkLy~TFQD~~  147 (604)
T KOG0592|consen   72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS----GHPGIVKLYFTFQDEE  147 (604)
T ss_pred             hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh----CCCCeEEEEEEeeccc
Confidence            367899999999999999999999999999999997532    22344667999999994    2345599999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      .+|+|+||+ +|+|.++|.+.+  .|++..++.++.||+.||+|||++|||||||||+|||++.++.++|+|||-++...
T Consensus       148 sLYFvLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~  225 (604)
T KOG0592|consen  148 SLYFVLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILS  225 (604)
T ss_pred             ceEEEEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCC
Confidence            999999999 999999999886  89999999999999999999999999999999999999888866666666554433


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                      .......           .+-..........+++||..|.+||++.....++.+|||+||||||.|+.|.+||.+.++..
T Consensus       226 ~~~~~~~-----------~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl  294 (604)
T KOG0592|consen  226 PSQKSQE-----------NPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL  294 (604)
T ss_pred             hhhcccc-----------CccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH
Confidence            2211000           00000001111245799999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .++.|..+...+|+                                                  ..++.++|||+++|..
T Consensus       295 iFqkI~~l~y~fp~--------------------------------------------------~fp~~a~dLv~KLLv~  324 (604)
T KOG0592|consen  295 IFQKIQALDYEFPE--------------------------------------------------GFPEDARDLIKKLLVR  324 (604)
T ss_pred             HHHHHHHhcccCCC--------------------------------------------------CCCHHHHHHHHHHHcc
Confidence            99999988666654                                                  3356899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~  426 (438)
                      ||.+|+|++||.+||||.+..
T Consensus       325 dp~~Rlt~~qIk~HpFF~~Vd  345 (604)
T KOG0592|consen  325 DPSDRLTSQQIKAHPFFEGVD  345 (604)
T ss_pred             CccccccHHHHhhCcccccCC
Confidence            999999999999999998743

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-54  Score=394.23  Aligned_cols=263  Identities=28%  Similarity=0.480  Sum_probs=225.2

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ..++|.+.++||+|+||+||+|+++.++..||||.+.+.   .+..+.+..|+.+|+.|+|+||     |.++++.+..+
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nI-----V~l~d~~~~~~   82 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNI-----VRLLDCIEDDD   82 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcce-----eeEEEEEecCC
Confidence            346789999999999999999999999999999998653   4566778899999999999888     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ++||||||| ||+|.+|+++++  .+++..++.++.||+.||++||+++||||||||+||||+....             
T Consensus        83 ~i~lVMEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~-------------  147 (429)
T KOG0595|consen   83 FIYLVMEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTAR-------------  147 (429)
T ss_pred             eEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCC-------------
Confidence            999999999 999999999886  8999999999999999999999999999999999999976421             


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                              .+....+||+|||+|+......  .+.+|++.|||||++..+.|+.|+|+||+|+|||++++|+.||...+.
T Consensus       148 --------~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~  219 (429)
T KOG0595|consen  148 --------NDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP  219 (429)
T ss_pred             --------CCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence                    0111579999999999877543  457999999999999999999999999999999999999999998888


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .+.+..+.+.-...|                                               ......+..+.+|+...|
T Consensus       220 ~eL~~~~~k~~~~~~-----------------------------------------------~~~~~~s~~~~~Ll~~ll  252 (429)
T KOG0595|consen  220 KELLLYIKKGNEIVP-----------------------------------------------VLPAELSNPLRELLISLL  252 (429)
T ss_pred             HHHHHHHhccccccC-----------------------------------------------chhhhccCchhhhhhHHH
Confidence            777665543221111                                               112234556779999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          404 RYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      +.||.+|.+..+-+.|+++..+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~l~~~p~  276 (429)
T KOG0595|consen  253 QRNPKDRISFEDFFDHPFLAANPQ  276 (429)
T ss_pred             hcCccccCchHHhhhhhhcccCcc
Confidence            999999999999999999987653

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.2e-54  Score=386.08  Aligned_cols=285  Identities=27%  Similarity=0.441  Sum_probs=231.6

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      +-.+.|+.+++|++|+||.||+|+|+.|++.||+|.++...   ...-...+||.+|.+++|+||     |.+.++....
T Consensus        73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NI-----V~vkEVVvG~  147 (419)
T KOG0663|consen   73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNI-----VEVKEVVVGS  147 (419)
T ss_pred             ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCe-----eeeEEEEecc
Confidence            34478999999999999999999999999999999997533   233456899999999999988     9998887643


Q ss_pred             --CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          166 --NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       166 --~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                        +.+|||||||..+|..++..-. ..|...+++.++.|++.||+|||.+.|+|||||++|+|++..|            
T Consensus       148 ~~d~iy~VMe~~EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G------------  214 (419)
T KOG0663|consen  148 NMDKIYIVMEYVEHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKG------------  214 (419)
T ss_pred             ccceeeeeHHHHHhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCC------------
Confidence              5799999999999999998765 6899999999999999999999999999999999999997766            


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                     .+||+|||+|+..+..   .+..+-|.+|+|||++.+.. |+.++|+||+|||+.||+++.+.|.
T Consensus       215 ---------------~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~  279 (419)
T KOG0663|consen  215 ---------------ILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFP  279 (419)
T ss_pred             ---------------cEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCC
Confidence                           5788888888776665   45568899999999999875 9999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC-chhHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH-SAGDLIDL  398 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l  398 (438)
                      +.+..+++..|.+.+|.+.+..|...                   ...+..-..........++....... .++...+|
T Consensus       280 G~sE~dQl~~If~llGtPte~iwpg~-------------------~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~L  340 (419)
T KOG0663|consen  280 GKSEIDQLDKIFKLLGTPSEAIWPGY-------------------SELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDL  340 (419)
T ss_pred             CCchHHHHHHHHHHhCCCccccCCCc-------------------cccchhhccccCCCCchhhhhhccccccchhHHHH
Confidence            99999999999999998876543221                   11111000000000011111111111 46788999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          399 LQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      +..+|.+||.+|.||.|.|+|.||.+.
T Consensus       341 ln~llt~dP~kR~tA~~~L~h~~F~e~  367 (419)
T KOG0663|consen  341 LNKLLTYDPGKRITAEDGLKHEYFRET  367 (419)
T ss_pred             HHHHhccCccccccHHHhhcccccccC
Confidence            999999999999999999999999984

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-54  Score=377.35  Aligned_cols=251  Identities=26%  Similarity=0.427  Sum_probs=227.0

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++++.||.|+||.|.+++.+.+|..+|+|++++..    +..+...+|..+|+.+.||.+     +++++.|.+.++
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFl-----v~l~~t~~d~~~  118 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFL-----VKLYGTFKDNSN  118 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCcee-----EEEEEeeccCCe
Confidence            67899999999999999999999999999999998643    345667889999999999888     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||||. ||.|..++++.+  .+++..++.++.||+.||+|||+++|++|||||+|||++.+|               
T Consensus       119 lymvmeyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G---------------  181 (355)
T KOG0616|consen  119 LYMVMEYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNG---------------  181 (355)
T ss_pred             EEEEEeccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCC---------------
Confidence            99999999 999999999875  899999999999999999999999999999999999997666               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                                  .+||+|||+|+......-+.|||+.|+|||++...+|+.++|+|||||++|||+.|.+||...+....
T Consensus       182 ------------~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~i  249 (355)
T KOG0616|consen  182 ------------HIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQI  249 (355)
T ss_pred             ------------cEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHH
Confidence                        67888888888888777778999999999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      ..+|.+.--.+|.                                                  ..+.++++||+++|+.|
T Consensus       250 Y~KI~~~~v~fP~--------------------------------------------------~fs~~~kdLl~~LL~vD  279 (355)
T KOG0616|consen  250 YEKILEGKVKFPS--------------------------------------------------YFSSDAKDLLKKLLQVD  279 (355)
T ss_pred             HHHHHhCcccCCc--------------------------------------------------ccCHHHHHHHHHHHhhh
Confidence            8888765444442                                                  44678999999999999


Q ss_pred             CCCCC-----CHHHHhcCCCCCCCC
Q 013678          407 PAERL-----KAREALRHPFFTRDV  426 (438)
Q Consensus       407 P~~Rp-----ta~ell~hp~f~~~~  426 (438)
                      -.+|.     ...+|.+||||++..
T Consensus       280 ~t~R~gnlknG~~dIk~H~wF~~v~  304 (355)
T KOG0616|consen  280 LTKRFGNLKNGVEDIKNHPWFKGVD  304 (355)
T ss_pred             hHhhhcCcCCCccccccCccccccc
Confidence            99994     578999999999754

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=3.7e-53  Score=398.86  Aligned_cols=283  Identities=27%  Similarity=0.414  Sum_probs=228.4

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      .+.|++++.||+|+||.||+|+.+.||..+|+|+++++..    ..+.+..|..+|....++.+     |+++-.|++..
T Consensus       140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~v-----VKLyYsFQD~~  214 (550)
T KOG0605|consen  140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWV-----VKLYYSFQDKE  214 (550)
T ss_pred             cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcE-----EEEEEEecCCC
Confidence            4789999999999999999999999999999999987553    34556678888887666555     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ++||||||+ ||++..+|.+.+  .|++..++.++.+++.|++.||+.|+|||||||+|+||+..|++||+||||+.-..
T Consensus       215 ~LYLiMEylPGGD~mTLL~~~~--~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~  292 (550)
T KOG0605|consen  215 YLYLIMEYLPGGDMMTLLMRKD--TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD  292 (550)
T ss_pred             eeEEEEEecCCccHHHHHHhcC--cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhh
Confidence            999999999 999999999876  89999999999999999999999999999999999999999999999999985433


Q ss_pred             CCCCccc------CCCCCCCeEEecCCCC--cccC--C----------C---CcccccCCCcchhHHHhCCCCCcchhHH
Q 013678          246 KDGSYFK------NLPKSSAIKLIDFGST--TFEH--Q----------D---HSYVVSTRHYRAPEVILGLGWNYPCDLW  302 (438)
Q Consensus       246 ~~~~~~~------~~~~~~~~kl~Dfg~a--~~~~--~----------~---~~~~~gt~~y~aPE~~~~~~~~~~~Diw  302 (438)
                      .......      .-......+-.||...  ....  .          .   .-..+|||.|||||++.+.+|+..+|+|
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW  372 (550)
T KOG0605|consen  293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW  372 (550)
T ss_pred             hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence            2221110      0001112344455431  1100  0          0   1126999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchh
Q 013678          303 SVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN  382 (438)
Q Consensus       303 SlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (438)
                      |||||+||||.|.+||.+.+..+....|......                      +.+|.                   
T Consensus       373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~----------------------l~fP~-------------------  411 (550)
T KOG0605|consen  373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET----------------------LKFPE-------------------  411 (550)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh----------------------ccCCC-------------------
Confidence            9999999999999999999999988888654211                      11111                   


Q ss_pred             hhhhccCCchhHHHHHHHHccccCCCCCCC---HHHHhcCCCCCCCCC
Q 013678          383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLK---AREALRHPFFTRDVR  427 (438)
Q Consensus       383 ~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt---a~ell~hp~f~~~~~  427 (438)
                           ....++++.|||.+||. ||++|..   ++||.+||||++...
T Consensus       412 -----~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W  453 (550)
T KOG0605|consen  412 -----EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDW  453 (550)
T ss_pred             -----cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCc
Confidence                 12446799999999999 9999994   999999999998653

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-52  Score=385.84  Aligned_cols=343  Identities=31%  Similarity=0.569  Sum_probs=268.5

Q ss_pred             CCCCCceeeecCCccC-CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcC---CC
Q 013678           76 DDKDGHYVFAIGENLT-PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---IG  151 (438)
Q Consensus        76 ~~~~~~~~~~~~~~~~-~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~---i~  151 (438)
                      .-.+|++++.+|+.+. +||.+.++||.|.|++||+|.|..+.+.||+|+++......+..+.||++|++++...   .+
T Consensus        61 Y~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~  140 (590)
T KOG1290|consen   61 YRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPG  140 (590)
T ss_pred             hhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            3457999999999999 9999999999999999999999999999999999988888899999999999998754   34


Q ss_pred             CcceEEecceecc----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEE
Q 013678          152 GTRCVQIRNWFDY----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENIL  226 (438)
Q Consensus       152 ~~~iv~~~~~~~~----~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIl  226 (438)
                      ..+||++++.|..    +.|+|||+|++|.+|..+|.....+.++...++.|++||+.||.|||. .||||-||||+|||
T Consensus       141 ~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvL  220 (590)
T KOG1290|consen  141 KKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVL  220 (590)
T ss_pred             CceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceee
Confidence            4688999999985    459999999999999999999888899999999999999999999995 69999999999999


Q ss_pred             EecCcc-----------cc------------c--------------CCc-------------------------------
Q 013678          227 LVSAEY-----------VK------------V--------------PDY-------------------------------  238 (438)
Q Consensus       227 i~~~~~-----------~k------------l--------------~df-------------------------------  238 (438)
                      +.....           +.            -              .++                               
T Consensus       221 l~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~  300 (590)
T KOG1290|consen  221 LCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQ  300 (590)
T ss_pred             eeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccc
Confidence            964410           00            0              000                               


Q ss_pred             ---------ccc----ccCC----------------CC------------------------CCccc-------------
Q 013678          239 ---------KFL----SRSS----------------KD------------------------GSYFK-------------  252 (438)
Q Consensus       239 ---------~l~----~~~~----------------~~------------------------~~~~~-------------  252 (438)
                               ..-    ..+.                +.                        ++...             
T Consensus       301 ~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v  380 (590)
T KOG1290|consen  301 ESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLV  380 (590)
T ss_pred             cccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCcccccccccc
Confidence                     000    0000                00                        00000             


Q ss_pred             -----CCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCC------C
Q 013678          253 -----NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT------H  321 (438)
Q Consensus       253 -----~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~------~  321 (438)
                           ......++||+|||.|...+...+.-+.|..|+|||++.+.+|+..+||||++|++|||+||...|..      .
T Consensus       381 ~p~~~~~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~  460 (590)
T KOG1290|consen  381 NPDIPLPECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYS  460 (590)
T ss_pred             CCCCCCCccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCC
Confidence                 01224569999999999988887778999999999999999999999999999999999999999954      3


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcc-cCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARL-DWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      .+.+.++.|.+++|.+|..+.... ++++.||.+.+.+ +......++.. +-+.+       ......+...++.+||.
T Consensus       461 rDEDHiA~i~ELLG~iPr~ia~~G-k~SRdFFnr~G~LrhI~~LK~WpL~-~VL~e-------KY~~s~e~A~~fsdFL~  531 (590)
T KOG1290|consen  461 RDEDHIALIMELLGKIPRKIALGG-KYSRDFFNRRGELRHIRRLKPWPLY-EVLIE-------KYEWSEEDAQQFSDFLS  531 (590)
T ss_pred             ccHHHHHHHHHHHhhccHHHHhcC-cchHhhhccccceecccccCCCcHH-HHHHH-------HhCCCHHHHHHHHHHHH
Confidence            467899999999999999877655 4455555554332 22222211111 11111       11222344668999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          401 GLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      -||+++|++|+||.++|+|||+.....
T Consensus       532 PmLef~PeKR~tA~~cl~hPwLn~~~~  558 (590)
T KOG1290|consen  532 PMLEFDPEKRPTAAQCLKHPWLNPVAG  558 (590)
T ss_pred             HHHhcCccccccHHHHhcCccccCCCC
Confidence            999999999999999999999997554

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=6.7e-53  Score=381.77  Aligned_cols=288  Identities=32%  Similarity=0.536  Sum_probs=234.3

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh---hHHHHHHHHHHHHHHHhcC-CCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD-IGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~-i~~~~iv~~~~~~~~~~  166 (438)
                      ...|..+++||+|+||+||+|+++.+|+.||+|+++...+   ......+|+.+|+.|+|+| |     +.+++++...+
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~i-----v~L~dv~~~~~   84 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHI-----VRLHDVIHTSN   84 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcce-----EEEEeeeeecc
Confidence            3457888999999999999999999999999999976433   4567799999999999997 6     99999998776


Q ss_pred             ------eEEEEEccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCc
Q 013678          167 ------HICIVFEKLGPSLYDFLRKNSY--RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  238 (438)
Q Consensus       167 ------~~~lv~e~~~~~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df  238 (438)
                            .+++||||+..+|.+++.....  ..++...++.+++||+.||+|||+++|+||||||.||||+..|       
T Consensus        85 ~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G-------  157 (323)
T KOG0594|consen   85 NHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSG-------  157 (323)
T ss_pred             cccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCC-------
Confidence                  8999999999999999987653  3588899999999999999999999999999999999997766       


Q ss_pred             cccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhC
Q 013678          239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       239 ~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg  314 (438)
                                          .+||+|||+|+...-+   .+..++|.+|+|||++.+. .|+...||||+|||++||+++
T Consensus       158 --------------------~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~  217 (323)
T KOG0594|consen  158 --------------------VLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTR  217 (323)
T ss_pred             --------------------cEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhC
Confidence                                5677777777644322   3446899999999999998 699999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      +..|.+.++.+++..|.+.+|.+.+..                   ||.....+.... .+.....+.......+..+++
T Consensus       218 ~~LFpG~se~~ql~~If~~lGtP~e~~-------------------Wp~v~~~~~~k~-~f~~~~~~~~l~~~~~~~~~~  277 (323)
T KOG0594|consen  218 RPLFPGDSEIDQLFRIFRLLGTPNEKD-------------------WPGVSSLPDYKA-PFPKWPGPKDLSSILPKLDPD  277 (323)
T ss_pred             CCCCCCCcHHHHHHHHHHHcCCCCccC-------------------CCCccccccccc-cCcCCCCccchHHhccccCcc
Confidence            999999999999999999999887533                   433322221111 000111122223333444578


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCCce
Q 013678          395 LIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT  430 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~~~  430 (438)
                      ..+++.+||++||.+|.||+.+|+||||.+.....+
T Consensus       278 ~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~~  313 (323)
T KOG0594|consen  278 GIELLSKLLQYDPAKRISAKGALTHPYFSELPEKSS  313 (323)
T ss_pred             HHHHHHHHhccCcccCcCHHHHhcChhhcccccchh
Confidence            999999999999999999999999999999765543

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-52  Score=398.44  Aligned_cols=253  Identities=31%  Similarity=0.478  Sum_probs=218.0

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc-----h-hhHHHHHHHHHHHHHHH-hcCCCCcceEEecce
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-----N-KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNW  161 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~-~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~  161 (438)
                      ...++|.+.+.||+|+||.|++|.+..+++.||+|++++.     . ...+.+.+|+.+++.+. |+||     ++++++
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI-----~~l~ev   88 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNI-----IRLLEV   88 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCE-----eEEEEE
Confidence            4557899999999999999999999999999999987653     1 23456678999999999 7766     999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                      +.....+|+||||| ||+|.+++...+  .+.+..++.++.||+.|++|||++||+||||||+|||++.+.         
T Consensus        89 ~~t~~~~~ivmEy~~gGdL~~~i~~~g--~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~---------  157 (370)
T KOG0583|consen   89 FATPTKIYIVMEYCSGGDLFDYIVNKG--RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE---------  157 (370)
T ss_pred             EecCCeEEEEEEecCCccHHHHHHHcC--CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC---------
Confidence            99999999999999 999999999854  899999999999999999999999999999999999997650         


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCC-CC-cchhHHHHHHHHHHHHhCC
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLG-WN-YPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DiwSlG~il~elltg~  315 (438)
                                       ..+||+|||++....   ....+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|.
T Consensus       158 -----------------~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~  220 (370)
T KOG0583|consen  158 -----------------GNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGR  220 (370)
T ss_pred             -----------------CCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCC
Confidence                             367888888887662   3445679999999999999987 85 8999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCc-hhH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS-AGD  394 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  394 (438)
                      .||...+.......|.+....+|                                                  ..+ +.+
T Consensus       221 ~PF~d~~~~~l~~ki~~~~~~~p--------------------------------------------------~~~~S~~  250 (370)
T KOG0583|consen  221 LPFDDSNVPNLYRKIRKGEFKIP--------------------------------------------------SYLLSPE  250 (370)
T ss_pred             CCCCCccHHHHHHHHhcCCccCC--------------------------------------------------CCcCCHH
Confidence            99998766666655544322222                                                  233 779


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          395 LIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      +++||.+||..||.+|+|+.++++||||+.
T Consensus       251 ~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  251 ARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            999999999999999999999999999997

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=2.2e-50  Score=404.72  Aligned_cols=326  Identities=38%  Similarity=0.677  Sum_probs=247.2

Q ss_pred             CCceeeecCCcc---CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCC-Ccc
Q 013678           79 DGHYVFAIGENL---TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG-GTR  154 (438)
Q Consensus        79 ~~~~~~~~~~~~---~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~-~~~  154 (438)
                      .+.+.+..++.+   .++|+++++||+|+||+||+|.+..+++.||||+++...........|+.+++.+.|.++. +.+
T Consensus       113 ~~~~~~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~  192 (467)
T PTZ00284        113 EGHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFP  192 (467)
T ss_pred             CCceeEecCCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcc
Confidence            345555556544   5899999999999999999999999999999999976555556678899999999988753 456


Q ss_pred             eEEecceeccC-CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcc
Q 013678          155 CVQIRNWFDYR-NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEY  232 (438)
Q Consensus       155 iv~~~~~~~~~-~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~  232 (438)
                      ++.++++|... +++|||||+++++|.+++.+..  .+++..++.|+.||+.||+|||+ .|||||||||+|||++.++.
T Consensus       193 i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~  270 (467)
T PTZ00284        193 LMKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHG--PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDT  270 (467)
T ss_pred             eeeeEEEEEcCCceEEEEEeccCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCc
Confidence            88999988764 5899999999999999998764  79999999999999999999998 59999999999999987653


Q ss_pred             cccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHH
Q 013678          233 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC  312 (438)
Q Consensus       233 ~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell  312 (438)
                      ..  ++....         ........+||+|||.+..........+||+.|+|||++.+..++.++|||||||++|||+
T Consensus       271 ~~--~~~~~~---------~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~ell  339 (467)
T PTZ00284        271 VV--DPVTNR---------ALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELY  339 (467)
T ss_pred             cc--cccccc---------ccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHH
Confidence            21  111100         0012334699999999876655556678999999999999999999999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhh-hhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCc
Q 013678          313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRR-AEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  391 (438)
Q Consensus       313 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (438)
                      +|+.||.+.+..+.+..+.+.+|.+|..|...+... ...++........   ..................      ...
T Consensus       340 tG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~------~~~  410 (467)
T PTZ00284        340 TGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRP---CTDPKHLARIARARPVRE------VIR  410 (467)
T ss_pred             hCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccc---cCCHHHHHhhhcccchhh------hhc
Confidence            999999999999999999999999998876543211 1122221111110   000011100000000000      012


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       392 ~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      ++.+.|||.+||++||++|||++|+|+||||.+..
T Consensus       411 ~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~  445 (467)
T PTZ00284        411 DDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYY  445 (467)
T ss_pred             hHHHHHHHHHhCCcChhhCCCHHHHhcCccccccC
Confidence            45789999999999999999999999999998743

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.1e-53  Score=371.73  Aligned_cols=242  Identities=31%  Similarity=0.480  Sum_probs=208.3

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCcceEEecc-eeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRN-WFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~-~~~~~~  166 (438)
                      ...|+|+++||+|+||+||++++..+|..||.|.++-   +...++....|+.+|++|+|+||     |++++ .|..++
T Consensus        18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNI-----VqYy~~~f~~~~   92 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNI-----VQYYAHSFIEDN   92 (375)
T ss_pred             HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchH-----HHHHHHhhhccc
Confidence            3568999999999999999999999999999999863   34566788899999999999988     99998 555555


Q ss_pred             e-EEEEEccC-CCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHh--CC--ceecCCCCCcEEEecCcccccCCc
Q 013678          167 H-ICIVFEKL-GPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHE--LR--LIHTDLKPENILLVSAEYVKVPDY  238 (438)
Q Consensus       167 ~-~~lv~e~~-~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~--~~--ivHrDlkp~NIli~~~~~~kl~df  238 (438)
                      . ++|||||| +|+|.+.++.  ...+.+++..+++++.|++.||.++|+  ..  |+||||||.||+++.+|       
T Consensus        93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~g-------  165 (375)
T KOG0591|consen   93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANG-------  165 (375)
T ss_pred             hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCC-------
Confidence            5 99999999 9999999974  344689999999999999999999999  44  99999999999997766       


Q ss_pred             cccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCc---ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCC
Q 013678          239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS---YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       239 ~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~  315 (438)
                                          .+||+|||+++......+   +.+|||+||+||.+.+.+|+.+|||||+||++|||+.-+
T Consensus       166 --------------------vvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~  225 (375)
T KOG0591|consen  166 --------------------VVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQ  225 (375)
T ss_pred             --------------------ceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcC
Confidence                                578888888887765543   479999999999999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCC-CChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          316 ALFQTHENLEHLAMMERVLGP-LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      +||.+.+-.+...+|.+.-.+ +|.                                                 ..+|.+
T Consensus       226 ~PF~g~n~~~L~~KI~qgd~~~~p~-------------------------------------------------~~YS~~  256 (375)
T KOG0591|consen  226 SPFYGDNLLSLCKKIEQGDYPPLPD-------------------------------------------------EHYSTD  256 (375)
T ss_pred             CCcccccHHHHHHHHHcCCCCCCcH-------------------------------------------------HHhhhH
Confidence            999999777777777654221 221                                                 245779


Q ss_pred             HHHHHHHccccCCCCCCCH
Q 013678          395 LIDLLQGLLRYDPAERLKA  413 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta  413 (438)
                      +..||..|+..||+.||+.
T Consensus       257 l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  257 LRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             HHHHHHHHccCCcccCCCc
Confidence            9999999999999999984

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.6e-52  Score=380.46  Aligned_cols=283  Identities=26%  Similarity=0.361  Sum_probs=233.0

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ..|++++.||.|.-|+||+|+...++..+|+|++.+..    ....+++.|-+||+.+.||.+     +.+|..|+.++.
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFl-----PTLYa~fet~~~  151 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFL-----PTLYASFETDKY  151 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCcc-----chhhheeeccce
Confidence            67899999999999999999999999999999997643    334566779999999999988     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      .|+||||| ||+|..+++++.++.+++..++.|+..++.||+|||-.|||+|||||+||||.++|++.|+||.|+.++..
T Consensus       152 ~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~  231 (459)
T KOG0610|consen  152 SCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPV  231 (459)
T ss_pred             eEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence            99999999 99999999999989999999999999999999999999999999999999999999999999999876643


Q ss_pred             CCCcccCCC-----CCCCeE---E----------------ecCCC--------CcccCCCCcccccCCCcchhHHHhCCC
Q 013678          247 DGSYFKNLP-----KSSAIK---L----------------IDFGS--------TTFEHQDHSYVVSTRHYRAPEVILGLG  294 (438)
Q Consensus       247 ~~~~~~~~~-----~~~~~k---l----------------~Dfg~--------a~~~~~~~~~~~gt~~y~aPE~~~~~~  294 (438)
                      ........+     ....+.   +                .|.+.        |...+.....++||-.|.|||++.|.+
T Consensus       232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G  311 (459)
T KOG0610|consen  232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG  311 (459)
T ss_pred             CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence            221111100     000000   1                12221        111122234479999999999999999


Q ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHH
Q 013678          295 WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV  374 (438)
Q Consensus       295 ~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (438)
                      .+.++|+|+|||+||||+.|..||.+.+..+.+..|....-.+|.                                   
T Consensus       312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~-----------------------------------  356 (459)
T KOG0610|consen  312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPE-----------------------------------  356 (459)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCC-----------------------------------
Confidence            999999999999999999999999999998888777543322221                                   


Q ss_pred             HHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCC----HHHHhcCCCCCCCCC
Q 013678          375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK----AREALRHPFFTRDVR  427 (438)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt----a~ell~hp~f~~~~~  427 (438)
                                   ...++.+++|||+++|.+||++|..    |.||.+||||+....
T Consensus       357 -------------~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnW  400 (459)
T KOG0610|consen  357 -------------EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNW  400 (459)
T ss_pred             -------------CCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCCh
Confidence                         1245678999999999999999998    999999999997543

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.9e-52  Score=399.47  Aligned_cols=254  Identities=28%  Similarity=0.495  Sum_probs=224.3

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      .+-|++.+-||.|+-|.|-+|++..||+.+|||++.+.    ......+.+||-||+.|.|||+     +++++++++..
T Consensus        11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnV-----l~LydVwe~~~   85 (786)
T KOG0588|consen   11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNV-----LRLYDVWENKQ   85 (786)
T ss_pred             ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCe-----eeeeeeeccCc
Confidence            35578999999999999999999999999999999754    2345667899999999999988     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ++|+|.||+ ||.|++++.+++  .+++.++.+++.||+.|+.|||..+|+||||||+|+|++..+              
T Consensus        86 ~lylvlEyv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~--------------  149 (786)
T KOG0588|consen   86 HLYLVLEYVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKN--------------  149 (786)
T ss_pred             eEEEEEEecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhccc--------------
Confidence            999999999 999999999886  899999999999999999999999999999999999996544              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                   ++||+|||+|......  -.+.||++.|.|||++.|.+| +.++||||+|||||.||+|..||.+.+
T Consensus       150 -------------nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN  216 (786)
T KOG0588|consen  150 -------------NIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN  216 (786)
T ss_pred             -------------CEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc
Confidence                         5899999999875433  355799999999999999998 489999999999999999999999877


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      -...+.++++....+                                                  +..++.++++||.+|
T Consensus       217 ir~LLlKV~~G~f~M--------------------------------------------------Ps~Is~eaQdLLr~m  246 (786)
T KOG0588|consen  217 IRVLLLKVQRGVFEM--------------------------------------------------PSNISSEAQDLLRRM  246 (786)
T ss_pred             HHHHHHHHHcCcccC--------------------------------------------------CCcCCHHHHHHHHHH
Confidence            777777666543332                                                  346788999999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      |..||++|+|.+||++|||+.....-
T Consensus       247 l~VDp~~RiT~~eI~kHP~l~g~~~~  272 (786)
T KOG0588|consen  247 LDVDPSTRITTEEILKHPFLSGYTSL  272 (786)
T ss_pred             hccCccccccHHHHhhCchhhcCCCC
Confidence            99999999999999999999876543

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-53  Score=364.10  Aligned_cols=260  Identities=25%  Similarity=0.410  Sum_probs=226.0

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+.+.|++.+.||+|.|+.|+++.+..+|+.+|+|+++.   .....+.+.+|+.|-+.|+||||     +++++.+...
T Consensus         8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~I-----vrL~~ti~~~   82 (355)
T KOG0033|consen    8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI-----VRLHDSIQEE   82 (355)
T ss_pred             ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcE-----eehhhhhccc
Confidence            467889999999999999999999999999999999863   23456788899999999999888     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +..|||+|++ |++|..-|-.+.  .+++..+-.+++||+.||.|+|.+||||||+||+|+++.+.              
T Consensus        83 ~~~ylvFe~m~G~dl~~eIV~R~--~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK--------------  146 (355)
T KOG0033|consen   83 SFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASK--------------  146 (355)
T ss_pred             ceeEEEEecccchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeec--------------
Confidence            9999999999 999987665543  68999999999999999999999999999999999999653              


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                ++...+||+|||+|.......  ...+||+.|||||++...+|+..+|||+.|||||-|+.|.+||++.+
T Consensus       147 ----------~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~  216 (355)
T KOG0033|consen  147 ----------AKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED  216 (355)
T ss_pred             ----------cCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc
Confidence                      244568999999998776332  23689999999999999999999999999999999999999999988


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ....++.|.+.-...|.                                              ..++.+++++++|+++|
T Consensus       217 ~~rlye~I~~g~yd~~~----------------------------------------------~~w~~is~~Ak~LvrrM  250 (355)
T KOG0033|consen  217 QHRLYEQIKAGAYDYPS----------------------------------------------PEWDTVTPEAKSLIRRM  250 (355)
T ss_pred             HHHHHHHHhccccCCCC----------------------------------------------cccCcCCHHHHHHHHHH
Confidence            88888887765433331                                              12356788999999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      |..||++|+|+.|+|+|||+.+.
T Consensus       251 L~~dP~kRIta~EAL~HpWi~~r  273 (355)
T KOG0033|consen  251 LTVNPKKRITADEALKHPWICNR  273 (355)
T ss_pred             hccChhhhccHHHHhCCchhcch
Confidence            99999999999999999999874

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.5e-51  Score=392.69  Aligned_cols=252  Identities=25%  Similarity=0.404  Sum_probs=216.4

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      .++|++++.||+|+||+|+++..+.+++.+|||++++.    +...+..+.|.+|+....    .||.++.++..|++.+
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~----~HPFL~~L~~~fQT~~  442 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN----RHPFLVNLFSCFQTKE  442 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc----cCCeEeecccccccCC
Confidence            47899999999999999999999999999999999874    345677888999998887    3455599999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ++|+||||+ ||++..+.+.   ..+++..++.|+..|+.||+|||++|||+||||.+|||++.+|+             
T Consensus       443 ~l~fvmey~~Ggdm~~~~~~---~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh-------------  506 (694)
T KOG0694|consen  443 HLFFVMEYVAGGDLMHHIHT---DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGH-------------  506 (694)
T ss_pred             eEEEEEEecCCCcEEEEEec---ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCc-------------
Confidence            999999999 8885444333   36999999999999999999999999999999999999988775             


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcc---cCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTF---EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                    +||+|||+++.   .+...++++||+.|||||++.+..|+.++|+|||||+||||+.|+.||.+.+
T Consensus       507 --------------~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd  572 (694)
T KOG0694|consen  507 --------------VKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD  572 (694)
T ss_pred             --------------EEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence                          55555555543   2344567899999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ..+....|...-...|                                                  ..++.++.++|+++
T Consensus       573 Eee~FdsI~~d~~~yP--------------------------------------------------~~ls~ea~~il~~l  602 (694)
T KOG0694|consen  573 EEEVFDSIVNDEVRYP--------------------------------------------------RFLSKEAIAIMRRL  602 (694)
T ss_pred             HHHHHHHHhcCCCCCC--------------------------------------------------CcccHHHHHHHHHH
Confidence            9999888865433322                                                  34577999999999


Q ss_pred             cccCCCCCCC-----HHHHhcCCCCCCCC
Q 013678          403 LRYDPAERLK-----AREALRHPFFTRDV  426 (438)
Q Consensus       403 L~~dP~~Rpt-----a~ell~hp~f~~~~  426 (438)
                      |..||++|..     +.+|.+||||+.-.
T Consensus       603 l~k~p~kRLG~~e~d~~~i~~hpFFr~i~  631 (694)
T KOG0694|consen  603 LRKNPEKRLGSGERDAEDIKKHPFFRSID  631 (694)
T ss_pred             hccCcccccCCCCCCchhhhhCCccccCC
Confidence            9999999995     68999999998753

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=5e-52  Score=391.54  Aligned_cols=251  Identities=29%  Similarity=0.512  Sum_probs=216.7

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+..   +..+...+|++|++.|+|+||     +.++++|+...++
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpni-----v~m~esfEt~~~~   76 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNI-----VEMLESFETSAHL   76 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcch-----hhHHHhhcccceE
Confidence            47889999999999999999999999999999997543   344567889999999999988     9999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      |+|+|||-|+|..++...+  .++++.++.++.|++.||.|||+.+|+|||+||.|||+...|                 
T Consensus        77 ~vVte~a~g~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~-----------------  137 (808)
T KOG0597|consen   77 WVVTEYAVGDLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGG-----------------  137 (808)
T ss_pred             EEEehhhhhhHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCC-----------------
Confidence            9999999669999998876  899999999999999999999999999999999999997666                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                .+|+||||+|+......   +.+.||+.|||||++.+.+|+..+|+||||||+||+++|++||...+-.+
T Consensus       138 ----------~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~  207 (808)
T KOG0597|consen  138 ----------TLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQ  207 (808)
T ss_pred             ----------ceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHH
Confidence                      56666666666554433   34689999999999999999999999999999999999999998766666


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....|..-...                        ||                          ...+..+.+||+.+|.+
T Consensus       208 Lv~~I~~d~v~------------------------~p--------------------------~~~S~~f~nfl~gLL~k  237 (808)
T KOG0597|consen  208 LVKSILKDPVK------------------------PP--------------------------STASSSFVNFLQGLLIK  237 (808)
T ss_pred             HHHHHhcCCCC------------------------Cc--------------------------ccccHHHHHHHHHHhhc
Confidence            55555432211                        11                          24577899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~  426 (438)
                      ||.+|+|..+++.|||+++..
T Consensus       238 dP~~RltW~~Ll~HpF~k~~~  258 (808)
T KOG0597|consen  238 DPAQRLTWTDLLGHPFWKGKI  258 (808)
T ss_pred             ChhhcccHHHHhcChHHhhhh
Confidence            999999999999999998754

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.5e-51  Score=372.37  Aligned_cols=281  Identities=28%  Similarity=0.527  Sum_probs=228.3

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC----
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR----  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~----  165 (438)
                      ..-.|.-.+.+|.|+||.||+|....+++.||||++-.+..   --.+|+.+|+.+.|+||     |++.-+|...    
T Consensus        22 ~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r---~knrEl~im~~l~HpNI-----V~L~~~f~~~~~~d   93 (364)
T KOG0658|consen   22 VEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR---YKNRELQIMRKLDHPNI-----VRLLYFFSSSTESD   93 (364)
T ss_pred             eEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC---cCcHHHHHHHhcCCcCe-----eeEEEEEEecCCCc
Confidence            33468899999999999999999999999999999865433   23469999999999888     9998887632    


Q ss_pred             -CeEEEEEccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          166 -NHICIVFEKLGPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       166 -~~~~lv~e~~~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                       -...+||||+..+|.++++..  .+..++.-.++-+++||++||.|||+.||+||||||.|||++.             
T Consensus        94 ~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~-------------  160 (364)
T KOG0658|consen   94 EVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDP-------------  160 (364)
T ss_pred             hhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcC-------------
Confidence             256799999999999999852  2357999999999999999999999999999999999999975             


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                   ..+.+||||||+|+.....  ..+...|..|+|||.+.|. .|+.+.||||.||++.||+.|++.|.
T Consensus       161 -------------~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFp  227 (364)
T KOG0658|consen  161 -------------DTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFP  227 (364)
T ss_pred             -------------CCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccC
Confidence                         3457999999999876543  3446789999999999987 49999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      |.+..+++..|.+++|.+..+..........       ...+|.-...      .|.        .-.....++++.+|+
T Consensus       228 G~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~-------~~~~p~ik~~------~~~--------~~~~~~~~~d~~dll  286 (364)
T KOG0658|consen  228 GDSSVDQLVEIIKVLGTPTREDIKSMNPNYT-------EFKFPQIKAH------PWH--------KVFFKRLPPDALDLL  286 (364)
T ss_pred             CCCHHHHHHHHHHHhCCCCHHHHhhcCcccc-------cccCcccccc------cce--------eecccCCCHHHHHHH
Confidence            9999999999999999998766544332211       0011110000      000        012345678999999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          400 QGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .++|+++|.+|.++.|++.||||..-
T Consensus       287 ~~~L~Y~P~~R~~~~~~l~h~fFdel  312 (364)
T KOG0658|consen  287 SKLLQYSPSKRLSALEALAHPFFDEL  312 (364)
T ss_pred             HHHhccChhhcCCHHHHhcchhhHHh
Confidence            99999999999999999999999864

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-50  Score=372.89  Aligned_cols=273  Identities=23%  Similarity=0.334  Sum_probs=222.6

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .+.|++.+.||.|.-++||+|+...+++.||||+++..+  ...+.+.+|+..++.++||||     ++++..|..+..+
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNI-----v~~~~sFvv~~~L   99 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNI-----VTYHCSFVVDSEL   99 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCc-----ceEEEEEEeccee
Confidence            367999999999999999999999999999999997543  335778899999999999988     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |+||.|| +|++.++++..-...+++..+..|+++++.||.|||.+|.||||||+.||||+.+|.+||+|||..      
T Consensus       100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvs------  173 (516)
T KOG0582|consen  100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVS------  173 (516)
T ss_pred             EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceee------
Confidence            9999999 999999999876677999999999999999999999999999999999999999998888888763      


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                  +-|.|-| .+..... .+++||++|||||++...  +|+.|+||||||++.+||.+|..||.......
T Consensus       174 ------------a~l~~~G-~R~~~rf-~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk  239 (516)
T KOG0582|consen  174 ------------ASLFDSG-DRQVTRF-NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK  239 (516)
T ss_pred             ------------eeecccC-ceeeEee-ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH
Confidence                        3344433 1111111 456999999999996643  69999999999999999999999998877665


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+.  ..+-+.+|.-...                      ..                ..+....++..++++|..||+.
T Consensus       240 vLl--~tLqn~pp~~~t~----------------------~~----------------~~d~~k~~~ksf~e~i~~CL~k  279 (516)
T KOG0582|consen  240 VLL--LTLQNDPPTLLTS----------------------GL----------------DKDEDKKFSKSFREMIALCLVK  279 (516)
T ss_pred             HHH--HHhcCCCCCcccc----------------------cC----------------ChHHhhhhcHHHHHHHHHHhhc
Confidence            543  3333444421100                      00                0011123355899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      ||++||||+++|+|+||+....+
T Consensus       280 DP~kRptAskLlkh~FFk~~k~~  302 (516)
T KOG0582|consen  280 DPSKRPTASKLLKHAFFKKAKSK  302 (516)
T ss_pred             CcccCCCHHHHhccHHHhhccch
Confidence            99999999999999999987654

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=1.4e-49  Score=374.55  Aligned_cols=278  Identities=30%  Similarity=0.503  Sum_probs=221.0

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ++|++.++||.|+||.||+|++..+++.||+|+++...  .....+.+|+.+++.++|+|+     +++++++.+.+..+
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~   79 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANI-----VTLHDIIHTERCLT   79 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCE-----eeEEEEEcCCCeEE
Confidence            56999999999999999999999999999999986432  234567789999999988877     99999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      +||||+.++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++                  
T Consensus        80 lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~------------------  140 (288)
T cd07871          80 LVFEYLDSDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG------------------  140 (288)
T ss_pred             EEEeCCCcCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC------------------
Confidence            999999779999987654 4589999999999999999999999999999999999997665                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                               .+||+|||++......   .....||..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+
T Consensus       141 ---------~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~  211 (288)
T cd07871         141 ---------ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE  211 (288)
T ss_pred             ---------CEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                     4666666666543221   123467899999999876 458999999999999999999999999998888


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..+.+..+.++...+........ +..    ..++..               ............+.++++||.+||++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~---------------~~~~~~~~~~~~~~~~~dll~~mL~~  271 (288)
T cd07871         212 ELHLIFRLLGTPTEETWPGITSNEE-FRS----YLFPQY---------------RAQPLINHAPRLDTDGIDLLSSLLLY  271 (288)
T ss_pred             HHHHHHHHhCCCChHHhhccccchh-hhc----cccCcc---------------CCCchHHhCCCCCHHHHHHHHHhcCc
Confidence            8888888888887765443221100 000    000000               00011122335677899999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 013678          406 DPAERLKAREALRHPFF  422 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f  422 (438)
                      ||.+|||++|+|+||||
T Consensus       272 dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         272 ETKSRISAEAALRHSYF  288 (288)
T ss_pred             CcccCCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.9e-51  Score=375.15  Aligned_cols=255  Identities=32%  Similarity=0.475  Sum_probs=206.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh-hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC--eE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN--HI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~--~~  168 (438)
                      .+|...+.||+|+||.||++.+..+|+..|||.+...+. ..+.+.+|+.+|.+++|++|     |++++......  .+
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~I-----V~~~G~~~~~~~~~~   91 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNI-----VQYYGSSSSRENDEY   91 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCE-----EeeCCccccccCeee
Confidence            457788999999999999999999999999999875421 14568899999999998877     99999755444  69


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec-CcccccCCccccccCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~-~~~~kl~df~l~~~~~~  246 (438)
                      +|.|||+ +|+|.+++.+.++ .+++..++.+++||+.||+|||++|||||||||+|||++. ++               
T Consensus        92 ~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~---------------  155 (313)
T KOG0198|consen   92 NIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNG---------------  155 (313)
T ss_pred             EeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCC---------------
Confidence            9999999 9999999998875 7999999999999999999999999999999999999977 45               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCC------CCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                  .+||+|||++.....      ......||+.|||||++..+ ...+++|||||||++.||+||..||.
T Consensus       156 ------------~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~  223 (313)
T KOG0198|consen  156 ------------DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWS  223 (313)
T ss_pred             ------------eEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcch
Confidence                        466677776654431      12346899999999999963 34469999999999999999999997


Q ss_pred             CC-ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          320 TH-ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       320 ~~-~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      .. .....+..+...                                                ......+..+++++++|
T Consensus       224 ~~~~~~~~~~~ig~~------------------------------------------------~~~P~ip~~ls~~a~~F  255 (313)
T KOG0198|consen  224 EFFEEAEALLLIGRE------------------------------------------------DSLPEIPDSLSDEAKDF  255 (313)
T ss_pred             hhcchHHHHHHHhcc------------------------------------------------CCCCCCCcccCHHHHHH
Confidence            63 222222111100                                                00113345578899999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          399 LQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      |.+||..||++||||.++|+|||.++...
T Consensus       256 l~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  256 LRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             HHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence            99999999999999999999999988765

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3e-51  Score=388.80  Aligned_cols=255  Identities=27%  Similarity=0.429  Sum_probs=219.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh-hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ...|...++||+|+.|.||.|....+++.||||.+..... .++-+.+|+.+|+..+|+||     |.+++.|-..+.+|
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~Ni-----Vnfl~Sylv~deLW  346 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNI-----VNFLDSYLVGDELW  346 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHH-----HHHHHHhcccceeE
Confidence            4678999999999999999999999999999999976544 34667899999999999988     99999999889999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ ||+|.|.+...   .+++.++..|++++++||+|||.+||+|||||.+|||++.+|.                
T Consensus       347 VVMEym~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~----------------  407 (550)
T KOG0578|consen  347 VVMEYMEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGS----------------  407 (550)
T ss_pred             EEEeecCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCc----------------
Confidence            999999 99999999875   4999999999999999999999999999999999999987764                


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                 +||+|||++.....   ...+.+||++|||||++....|++++||||||++++||+.|++||-..+...
T Consensus       408 -----------vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr  476 (550)
T KOG0578|consen  408 -----------VKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR  476 (550)
T ss_pred             -----------EEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHH
Confidence                       66666666554333   3456799999999999999999999999999999999999999998776666


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..|..- |                                              .........+|..+++||.+||+.
T Consensus       477 AlyLIa~n-g----------------------------------------------~P~lk~~~klS~~~kdFL~~cL~~  509 (550)
T KOG0578|consen  477 ALYLIATN-G----------------------------------------------TPKLKNPEKLSPELKDFLDRCLVV  509 (550)
T ss_pred             HHHHHhhc-C----------------------------------------------CCCcCCccccCHHHHHHHHHHhhc
Confidence            65555321 1                                              112234456789999999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      |+.+|++|.|+|+||||+....
T Consensus       510 dv~~RasA~eLL~HpFl~~a~p  531 (550)
T KOG0578|consen  510 DVEQRASAKELLEHPFLKMAKP  531 (550)
T ss_pred             chhcCCCHHHHhcChhhhhcCC
Confidence            9999999999999999976543

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.5e-50  Score=376.57  Aligned_cols=250  Identities=25%  Similarity=0.337  Sum_probs=213.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++....    ...+.+.+|+.+++.+.|+||     +++++++.+.+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~~   75 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFI-----IRLFWTEHDQRF   75 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcH-----hhhHhhhccCCe
Confidence            46899999999999999999999999999999986432    234567789999999998887     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|+||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.+|               
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~---------------  138 (291)
T cd05612          76 LYMLMEYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG---------------  138 (291)
T ss_pred             EEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC---------------
Confidence            99999999 999999998764  799999999999999999999999999999999999996654               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                                  .+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus       139 ------------~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~  206 (291)
T cd05612         139 ------------HIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI  206 (291)
T ss_pred             ------------CEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                        57888888877655544456899999999999998899999999999999999999999988776555


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      ...+......                                                  .+...+..+++||++||+.|
T Consensus       207 ~~~i~~~~~~--------------------------------------------------~~~~~~~~~~~li~~~l~~d  236 (291)
T cd05612         207 YEKILAGKLE--------------------------------------------------FPRHLDLYAKDLIKKLLVVD  236 (291)
T ss_pred             HHHHHhCCcC--------------------------------------------------CCccCCHHHHHHHHHHcCCC
Confidence            5444321111                                                  11234668999999999999


Q ss_pred             CCCCCC-----HHHHhcCCCCCCC
Q 013678          407 PAERLK-----AREALRHPFFTRD  425 (438)
Q Consensus       407 P~~Rpt-----a~ell~hp~f~~~  425 (438)
                      |.+|++     ++++++||||+..
T Consensus       237 p~~R~~~~~~~~~~~l~h~~~~~~  260 (291)
T cd05612         237 RTRRLGNMKNGADDVKNHRWFKSV  260 (291)
T ss_pred             HHHccCCccCCHHHHhcCccccCC
Confidence            999995     9999999999753

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=6.3e-49  Score=369.90  Aligned_cols=280  Identities=32%  Similarity=0.614  Sum_probs=220.0

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ++|++.+.||+|+||.||+|++..+++.||+|++....   ...+.+.+|+.+++.++|+|+     +++++++...+.+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~   75 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENI-----VELKEAFRRRGKL   75 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccc-----cchhhhEecCCEE
Confidence            47999999999999999999999999999999987532   334567889999999998887     9999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      |+||||+.+++.+.+.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++                 
T Consensus        76 ~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~-----------------  137 (287)
T cd07848          76 YLVFEYVEKNMLELLEEMP-NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHND-----------------  137 (287)
T ss_pred             EEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC-----------------
Confidence            9999999444444444332 4699999999999999999999999999999999999997655                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                .+||+|||++......    .....||..|+|||++.+..++.++|||||||++|+|++|+.||.+.+..
T Consensus       138 ----------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~  207 (287)
T cd07848         138 ----------VLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEI  207 (287)
T ss_pred             ----------cEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH
Confidence                      4666677766543221    12347899999999999988999999999999999999999999998888


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +....+....+++|............  +   ....++......             ..........+.++.+||++||+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~-------------~~~~~~~~~~s~~~~dll~~~L~  269 (287)
T cd07848         208 DQLFTIQKVLGPLPAEQMKLFYSNPR--F---HGLRFPAVNHPQ-------------SLERRYLGILSGVLLDLMKNLLK  269 (287)
T ss_pred             HHHHHHHHhhCCCCHHHHHhhhccch--h---cccccCcccCcc-------------cHHHhhhcccCHHHHHHHHHHcc
Confidence            88888888888888765432211100  0   011111111000             00111223467789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCC
Q 013678          405 YDPAERLKAREALRHPFF  422 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f  422 (438)
                      +||++|||++|+|+||||
T Consensus       270 ~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         270 LNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             CCcccCCCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=1.4e-49  Score=381.57  Aligned_cols=250  Identities=27%  Similarity=0.414  Sum_probs=213.4

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++.+.||+|+||.||+|++..+++.||+|++....    ...+.+.+|+.+++.++|+||     +++++++.+++.
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~~   92 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFI-----VNMMCSFQDENR   92 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCC-----CcEEEEEEcCCE
Confidence            67999999999999999999999999999999997532    234567889999999998887     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++               
T Consensus        93 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~---------------  155 (329)
T PTZ00263         93 VYFLLEFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKG---------------  155 (329)
T ss_pred             EEEEEcCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCC---------------
Confidence            99999999 999999998764  789999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                                  .+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus       156 ------------~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~  223 (329)
T PTZ00263        156 ------------HVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI  223 (329)
T ss_pred             ------------CEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH
Confidence                        57788888777655555556899999999999999999999999999999999999999987766554


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      ...+.....                                                  ..+..++..+.+||.+||+.|
T Consensus       224 ~~~i~~~~~--------------------------------------------------~~p~~~~~~~~~li~~~L~~d  253 (329)
T PTZ00263        224 YEKILAGRL--------------------------------------------------KFPNWFDGRARDLVKGLLQTD  253 (329)
T ss_pred             HHHHhcCCc--------------------------------------------------CCCCCCCHHHHHHHHHHhhcC
Confidence            444322110                                                  011234668899999999999


Q ss_pred             CCCCCC-----HHHHhcCCCCCCC
Q 013678          407 PAERLK-----AREALRHPFFTRD  425 (438)
Q Consensus       407 P~~Rpt-----a~ell~hp~f~~~  425 (438)
                      |.+|++     ++++++||||++.
T Consensus       254 P~~R~~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        254 HTKRLGTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             HHHcCCCCCCCHHHHhcCCccCCC
Confidence            999997     7999999999873

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-49  Score=368.25  Aligned_cols=258  Identities=27%  Similarity=0.389  Sum_probs=209.7

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---------------hhHHHHHHHHHHHHHHHhcCCCCc
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------------KYREAAMIEIDVLQRLARHDIGGT  153 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~E~~~l~~l~~~~i~~~  153 (438)
                      ..-.+|++++.||+|.||.|-+|++..+++.||||++.+..               ...+...+||.||++|.|+|+   
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV---  170 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV---  170 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe---
Confidence            34578999999999999999999999999999999996422               123578899999999999888   


Q ss_pred             ceEEecceeccC--CeEEEEEccC-CCCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 013678          154 RCVQIRNWFDYR--NHICIVFEKL-GPSLYDFLRKNSYRS-FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  229 (438)
Q Consensus       154 ~iv~~~~~~~~~--~~~~lv~e~~-~~~L~~~l~~~~~~~-l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  229 (438)
                        |+++++.++.  +.+|||+||| .|.+...=   .... +++.+++.|+++++.||+|||.+|||||||||+|+|++.
T Consensus       171 --V~LiEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~  245 (576)
T KOG0585|consen  171 --VKLIEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSS  245 (576)
T ss_pred             --eEEEEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcC
Confidence              9999999874  5899999999 77654332   2234 899999999999999999999999999999999999988


Q ss_pred             CcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC--------CCcccccCCCcchhHHHhCCC----CCc
Q 013678          230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--------DHSYVVSTRHYRAPEVILGLG----WNY  297 (438)
Q Consensus       230 ~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--------~~~~~~gt~~y~aPE~~~~~~----~~~  297 (438)
                      +|.+||                           +|||.+.....        .-...+||+.|+|||...++.    .+.
T Consensus       246 ~g~VKI---------------------------sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~  298 (576)
T KOG0585|consen  246 DGTVKI---------------------------SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGF  298 (576)
T ss_pred             CCcEEe---------------------------eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccch
Confidence            775554                           55554433211        112269999999999998742    358


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHh
Q 013678          298 PCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL  377 (438)
Q Consensus       298 ~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (438)
                      +.||||+||+||.|+.|+.||-+....+...+|....-.+|                        +              
T Consensus       299 a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP------------------------~--------------  340 (576)
T KOG0585|consen  299 ALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFP------------------------E--------------  340 (576)
T ss_pred             hhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCC------------------------C--------------
Confidence            89999999999999999999998888887777765422222                        1              


Q ss_pred             ccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       378 ~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                                .+++.+.++|||.+||.+||++|++..+|..|||..+....+
T Consensus       341 ----------~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~~~  382 (576)
T KOG0585|consen  341 ----------NPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGDSP  382 (576)
T ss_pred             ----------cccccHHHHHHHHHHhhcChhheeehhhheecceeccCCCCC
Confidence                      224567899999999999999999999999999999875443

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-49  Score=379.19  Aligned_cols=266  Identities=32%  Similarity=0.503  Sum_probs=230.6

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh----hHHHHHHHHHHHHHHH-hcCCCCcceEEecce
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLA-RHDIGGTRCVQIRNW  161 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~  161 (438)
                      ...+...|++.+.||+|.||.||+|+++.+|+.+|+|++.+...    ..+.+.+|+.+|+++. |+|+     |.+++.
T Consensus        30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpni-----v~l~~~  104 (382)
T KOG0032|consen   30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNI-----VQLKDA  104 (382)
T ss_pred             cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCE-----EEEEEE
Confidence            45667889999999999999999999999999999999975332    4468899999999998 7766     999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                      |++...+++|||+| ||.|.+.+...   .+++..+..++.||+.|++|||+.||+||||||+|+|+....         
T Consensus       105 ~e~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~---------  172 (382)
T KOG0032|consen  105 FEDPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKD---------  172 (382)
T ss_pred             EEcCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeecccc---------
Confidence            99999999999999 99999999876   299999999999999999999999999999999999996542         


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCC--CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                    ..+..+|++|||+|.....  .....+||+.|+|||++....|+..+||||+||++|.|+.|..||
T Consensus       173 --------------~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF  238 (382)
T KOG0032|consen  173 --------------EGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPF  238 (382)
T ss_pred             --------------CCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCC
Confidence                          1235799999999988766  345579999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      .+.+.......+...-..+                                              ....++.++..+.+|
T Consensus       239 ~~~~~~~~~~~i~~~~~~f----------------------------------------------~~~~w~~is~~akd~  272 (382)
T KOG0032|consen  239 WGETEFEIFLAILRGDFDF----------------------------------------------TSEPWDDISESAKDF  272 (382)
T ss_pred             cCCChhHHHHHHHcCCCCC----------------------------------------------CCCCccccCHHHHHH
Confidence            9988877776554432211                                              122345668899999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          399 LQGLLRYDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      |.+||..||.+|+||.++|+|||+++....+
T Consensus       273 i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~  303 (382)
T KOG0032|consen  273 IRKLLEFDPRKRLTAAQALQHPWIKSIGEAT  303 (382)
T ss_pred             HHHhcccCcccCCCHHHHhcCccccCCcccc
Confidence            9999999999999999999999999864443

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=100.00  E-value=4.7e-50  Score=374.71  Aligned_cols=320  Identities=33%  Similarity=0.579  Sum_probs=265.9

Q ss_pred             CCCCCCceeeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCC-CCc
Q 013678           75 PDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI-GGT  153 (438)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i-~~~  153 (438)
                      .++..|+|.+.+|+.+..||.+....|+|-|++|..|.+..-|..||||+++.+..-.+.-++|++||++|+...- +..
T Consensus       415 WdDaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~  494 (752)
T KOG0670|consen  415 WDDAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKF  494 (752)
T ss_pred             cccccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhh
Confidence            3566799999999999999999999999999999999999999999999999887777888899999999998654 346


Q ss_pred             ceEEecceeccCCeEEEEEccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcc
Q 013678          154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY  232 (438)
Q Consensus       154 ~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~  232 (438)
                      ||++++-.|.+.+|+|||+|-+..+|.++|++.+ +..|....++.|+.|++.||..|-.+||+|.||||+|||++..  
T Consensus       495 Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~--  572 (752)
T KOG0670|consen  495 HCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNES--  572 (752)
T ss_pred             HHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccC--
Confidence            8899999999999999999999999999999765 3568899999999999999999999999999999999999763  


Q ss_pred             cccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCc-ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHH
Q 013678          233 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS-YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL  311 (438)
Q Consensus       233 ~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  311 (438)
                                              ...+||||||.|........ .+.-+..|+|||+++|.+|+...|+||.||+||||
T Consensus       573 ------------------------k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYEl  628 (752)
T KOG0670|consen  573 ------------------------KNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYEL  628 (752)
T ss_pred             ------------------------cceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEe
Confidence                                    34689999999988766543 35667889999999999999999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCC--------------CCCChhhHHHHHHh
Q 013678          312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD--------------GATSRDSMRAVWKL  377 (438)
Q Consensus       312 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~  377 (438)
                      +||+..|.+.++.+++..+..+-|.+|..++.........|....-.+....              ....+.....+...
T Consensus       629 YtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~  708 (752)
T KOG0670|consen  629 YTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAV  708 (752)
T ss_pred             eccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhcc
Confidence            9999999999999999999999999999999887766655543321111111              11112222222222


Q ss_pred             ccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       378 ~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      .+++...    ...-.++.+||.+||..||++|.|..++|+||||+.
T Consensus       709 q~~~deq----~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  709 QRLPDEQ----PKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             CCCCchh----HHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence            2222221    123457999999999999999999999999999975

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.8e-48  Score=375.50  Aligned_cols=280  Identities=30%  Similarity=0.501  Sum_probs=218.8

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC----
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR----  165 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~----  165 (438)
                      +|++.++||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.++|+|+     +++++++...    
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~~~~~   75 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDI-----VEIKHIMLPPSRRE   75 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCE-----eeecceEeccCCCC
Confidence            689999999999999999999999999999998642   2233567889999999998887     9998887532    


Q ss_pred             -CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 -NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 -~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                       ..+|+|||||+++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.            
T Consensus        76 ~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~------------  141 (338)
T cd07859          76 FKDIYVVFELMESDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCK------------  141 (338)
T ss_pred             CceEEEEEecCCCCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCc------------
Confidence             3589999999889999997654  6999999999999999999999999999999999999977664            


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC------CcccccCCCcchhHHHhC--CCCCcchhHHHHHHHHHHHHhCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~  316 (438)
                                     +||+|||++......      ....+||..|+|||++.+  ..++.++|||||||++|+|++|+.
T Consensus       142 ---------------~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~  206 (338)
T cd07859         142 ---------------LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKP  206 (338)
T ss_pred             ---------------EEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCC
Confidence                           555666655432111      123478999999999876  568999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhh-hhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRA-EKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      ||.+.+....+..+....+.++........... ..++..                  ...  ..+..........++.+
T Consensus       207 pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------------~~~--~~~~~~~~~~~~~~~~~  266 (338)
T cd07859         207 LFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSS------------------MRK--KQPVPFSQKFPNADPLA  266 (338)
T ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHh------------------hcc--cCCCchHHhcCCCChHH
Confidence            999988888888888888887766544332110 000000                  000  00000111223456789


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          396 IDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      .+||.+||+.||++|||++|+++||||++-.
T Consensus       267 ~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~  297 (338)
T cd07859         267 LRLLERLLAFDPKDRPTAEEALADPYFKGLA  297 (338)
T ss_pred             HHHHHHHcCcCcccCCCHHHHhcCchhhhcC
Confidence            9999999999999999999999999997643

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.6e-50  Score=343.45  Aligned_cols=252  Identities=27%  Similarity=0.453  Sum_probs=224.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++.+.||+|-||.||+|+.+.++..||+|++.++.    ....++.+|++|...|+||||     +++|++|.+...
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpni-----lrlY~~fhd~~r   96 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNI-----LRLYGYFHDSKR   96 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccH-----Hhhhhheeccce
Confidence            57899999999999999999999999999999997643    345678899999999999888     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||++||. .|+|+..|.......+++..+..+++|++.||.|+|.++||||||||+|+|++.+|               
T Consensus        97 iyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~---------------  161 (281)
T KOG0580|consen   97 IYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAG---------------  161 (281)
T ss_pred             eEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCC---------------
Confidence            99999999 99999999977667899999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccC-CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEH-QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                  .+||+|||.+.... ....+.+||..|.+||...+..++..+|+|++|++.||++.|.+||...+..+
T Consensus       162 ------------~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e  229 (281)
T KOG0580|consen  162 ------------ELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE  229 (281)
T ss_pred             ------------CeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH
Confidence                        67888888887664 44566899999999999999999999999999999999999999999888777


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..|.+..-..|                                                  ..++.++.|||.+||..
T Consensus       230 tYkrI~k~~~~~p--------------------------------------------------~~is~~a~dlI~~ll~~  259 (281)
T KOG0580|consen  230 TYKRIRKVDLKFP--------------------------------------------------STISGGAADLISRLLVK  259 (281)
T ss_pred             HHHHHHHccccCC--------------------------------------------------cccChhHHHHHHHHhcc
Confidence            7777766533332                                                  35677999999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~  425 (438)
                      +|.+|.+..|++.|||+...
T Consensus       260 ~p~~r~~l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  260 NPIERLALTEVMDHPWIVAN  279 (281)
T ss_pred             CccccccHHHHhhhHHHHhc
Confidence            99999999999999998754

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.3e-48  Score=370.64  Aligned_cols=286  Identities=28%  Similarity=0.447  Sum_probs=214.7

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ++|++.++||+|+||.||+|++..+++.||||+++...  .....+.+|+.+++.+.|+|+     +++++++.+....|
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~   79 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANI-----VLLHDIIHTKETLT   79 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCc-----CeEEEEEecCCeEE
Confidence            67999999999999999999999999999999986432  223456789999999998887     99999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      +||||++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++                  
T Consensus        80 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~------------------  140 (303)
T cd07869          80 LVFEYVHTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTG------------------  140 (303)
T ss_pred             EEEECCCcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC------------------
Confidence            999999889999887653 4689999999999999999999999999999999999997665                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCh-H
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN-L  324 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~-~  324 (438)
                               .+||+|||++.....   ......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+..+ .
T Consensus       141 ---------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  211 (303)
T cd07869         141 ---------ELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ  211 (303)
T ss_pred             ---------CEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH
Confidence                     466666666543221   11234689999999998764 588999999999999999999999987544 3


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +.+..+....+.+....+...... ..+...    .+.  ...+......+           .....++++.+||.+||+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~--~~~~~~~~~~~-----------~~~~~~~~~~dli~~mL~  273 (303)
T cd07869         212 DQLERIFLVLGTPNEDTWPGVHSL-PHFKPE----RFT--LYSPKNLRQAW-----------NKLSYVNHAEDLASKLLQ  273 (303)
T ss_pred             HHHHHHHHHhCCCChhhccchhhc-cccccc----ccc--ccCCccHHHHh-----------hccCCChHHHHHHHHHhc
Confidence            455556555555443221111000 000000    000  00000001111           011245688999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      .||++|||+.|+|+||||++...+
T Consensus       274 ~dp~~R~s~~~~l~h~~f~~~~~~  297 (303)
T cd07869         274 CFPKNRLSAQAALSHEYFSDLPPR  297 (303)
T ss_pred             cCchhccCHHHHhcCcccccCChh
Confidence            999999999999999999986544

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=7.4e-48  Score=374.17  Aligned_cols=302  Identities=28%  Similarity=0.471  Sum_probs=230.5

Q ss_pred             CCceeeecCC---ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCC
Q 013678           79 DGHYVFAIGE---NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGG  152 (438)
Q Consensus        79 ~~~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~  152 (438)
                      .++|.+..++   .+.++|++.+.||+|+||.||+|.+..+|+.||+|++...   ......+.+|+.+++.++|+||  
T Consensus         5 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni--   82 (359)
T cd07876           5 SQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI--   82 (359)
T ss_pred             CCcceecccchhhhhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCE--
Confidence            3456666666   4668999999999999999999999999999999998642   2344567789999999988877  


Q ss_pred             cceEEecceeccC------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEE
Q 013678          153 TRCVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL  226 (438)
Q Consensus       153 ~~iv~~~~~~~~~------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  226 (438)
                         +++++++...      ..+|+||||++++|.+.+..    .+++..+..++.||+.||+|||++||+||||||+|||
T Consensus        83 ---v~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl  155 (359)
T cd07876          83 ---ISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV  155 (359)
T ss_pred             ---eeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEE
Confidence               9999988643      35899999998788887743    4889999999999999999999999999999999999


Q ss_pred             EecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHH
Q 013678          227 LVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSV  304 (438)
Q Consensus       227 i~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  304 (438)
                      ++.+|                           .+||+|||++......  .....||..|+|||++.+..++.++|||||
T Consensus       156 ~~~~~---------------------------~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSl  208 (359)
T cd07876         156 VKSDC---------------------------TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV  208 (359)
T ss_pred             ECCCC---------------------------CEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHH
Confidence            97665                           4667777766543222  223578999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhh
Q 013678          305 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  384 (438)
Q Consensus       305 G~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (438)
                      ||++|+|++|..||.+.+..+....+.+.++.++..+..........+......  ++..     .....+.....+ ..
T Consensus       209 G~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~-~~  280 (359)
T cd07876         209 GCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQ--YPGI-----SFEELFPDWIFP-SE  280 (359)
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCC--CCCc-----chhhhccccccc-cc
Confidence            999999999999999988888888888888888777665544333333322111  1100     000000000000 00


Q ss_pred             hhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       385 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      .......+.++++||.+||+.||++|||+.|+|+||||..
T Consensus       281 ~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         281 SERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             cccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence            0111234668999999999999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.6e-48  Score=381.42  Aligned_cols=281  Identities=23%  Similarity=0.372  Sum_probs=216.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      ..+|++++.||+|+||.||+|.+..+++.||+|...     ...+.+|+.+++.++|+||     ++++++|..+...|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnI-----v~~~~~~~~~~~~~l  160 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSI-----IQLKGTFTYNKFTCL  160 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCC-----CCEeEEEEECCeeEE
Confidence            468999999999999999999999999999999753     2456789999999999887     999999999999999


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       171 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||+++++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++                   
T Consensus       161 v~e~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~-------------------  219 (391)
T PHA03212        161 ILPRYKTDLYCYLAAKR--NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPG-------------------  219 (391)
T ss_pred             EEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCC-------------------
Confidence            99999889999987654  689999999999999999999999999999999999997655                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCC----CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC-----
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQ----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-----  321 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~-----  321 (438)
                              .++|+|||+|.....    ......||+.|+|||++.+..++.++|||||||++|||++|..||...     
T Consensus       220 --------~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~  291 (391)
T PHA03212        220 --------DVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDG  291 (391)
T ss_pred             --------CEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccc
Confidence                    467777777654221    122357999999999999989999999999999999999999887543     


Q ss_pred             --ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          322 --ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       322 --~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                        ....++..+....|..|..+...........+...... .....              ............+.++.+||
T Consensus       292 ~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~l~~Li  356 (391)
T PHA03212        292 DCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKK-SSRKP--------------GSRPLWTNLYELPIDLEYLI  356 (391)
T ss_pred             cCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhc-cCCCC--------------CCCCCHHHHhhhhhhHHHHH
Confidence              23456777777777776544222111111111000000 00000              00000111123456899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          400 QGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .+||++||++||||+|+|+||||++.
T Consensus       357 ~~mL~~dP~~Rpta~elL~hp~f~~~  382 (391)
T PHA03212        357 CKMLAFDAHHRPSAEALLDFAAFQDI  382 (391)
T ss_pred             HHHhcCChhhCCCHHHHhcChhhccC
Confidence            99999999999999999999999874

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=1.3e-48  Score=375.82  Aligned_cols=251  Identities=25%  Similarity=0.393  Sum_probs=211.8

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCC-cEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .++|++.+.||+|+||.||+|.+..++ ..||+|++....    ...+.+.+|+.++..++|+||     +++++++.++
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~I-----v~~~~~~~~~  103 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFC-----VNLYGSFKDE  103 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCC-----cceEEEEEeC
Confidence            467999999999999999999876654 689999986532    234567789999999998887     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.+|             
T Consensus       104 ~~~~lv~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~-------------  168 (340)
T PTZ00426        104 SYLYLVLEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG-------------  168 (340)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC-------------
Confidence            9999999999 999999998764  699999999999999999999999999999999999996655             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                    .+||+|||++...........||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..
T Consensus       169 --------------~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~  234 (340)
T PTZ00426        169 --------------FIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL  234 (340)
T ss_pred             --------------CEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH
Confidence                          577777877766554445568999999999999988999999999999999999999999887665


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      .....+......                                                  .+...++.+.++|++||+
T Consensus       235 ~~~~~i~~~~~~--------------------------------------------------~p~~~~~~~~~li~~~l~  264 (340)
T PTZ00426        235 LIYQKILEGIIY--------------------------------------------------FPKFLDNNCKHLMKKLLS  264 (340)
T ss_pred             HHHHHHhcCCCC--------------------------------------------------CCCCCCHHHHHHHHHHcc
Confidence            544444321111                                                  122346688999999999


Q ss_pred             cCCCCCC-----CHHHHhcCCCCCCC
Q 013678          405 YDPAERL-----KAREALRHPFFTRD  425 (438)
Q Consensus       405 ~dP~~Rp-----ta~ell~hp~f~~~  425 (438)
                      .||++|+     |++++++||||++.
T Consensus       265 ~dp~~R~~~~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        265 HDLTKRYGNLKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             cCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            9999996     89999999999864

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=4.5e-48  Score=364.62  Aligned_cols=279  Identities=31%  Similarity=0.500  Sum_probs=212.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECC-CCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceec----
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD----  163 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~----  163 (438)
                      .+|++.+.||+|+||.||+|++.. +++.||+|+++...   .......+|+.+++.+..  +.|+|++++++++.    
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~hpniv~~~~~~~~~~~   78 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET--FEHPNVVRLFDVCTVSRT   78 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcc--cCCCCcceEEEEEecccC
Confidence            479999999999999999999854 56889999986432   223456678888877741  12344499999874    


Q ss_pred             -cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          164 -YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       164 -~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                       ....+++||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++           
T Consensus        79 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~-----------  147 (290)
T cd07862          79 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-----------  147 (290)
T ss_pred             CCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCC-----------
Confidence             34579999999988999999876555689999999999999999999999999999999999997665           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                      .++|+|||++......  .....||..|+|||++.+..++.++|||||||++|||++|..||.+
T Consensus       148 ----------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~  211 (290)
T cd07862         148 ----------------QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG  211 (290)
T ss_pred             ----------------CEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCC
Confidence                            4666666666543222  2335789999999999988999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      .++.+.+..+....+.++...+..........+.                       ..............+..+.+||.
T Consensus       212 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~li~  268 (290)
T cd07862         212 SSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFH-----------------------SKSAQPIEKFVTDIDELGKDLLL  268 (290)
T ss_pred             CCHHHHHHHHHHHhCCCChhhchhhhcccchhcc-----------------------CCCCCCHHHHccCCCHHHHHHHH
Confidence            9888888888877665443221111000000000                       00001111222356778999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCC
Q 013678          401 GLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      +||+.||++|||+.|+|+||||
T Consensus       269 ~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         269 KCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             HHhccCchhcCCHHHHhcCCCC
Confidence            9999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=6e-48  Score=383.12  Aligned_cols=282  Identities=27%  Similarity=0.483  Sum_probs=219.9

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc----
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY----  164 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~----  164 (438)
                      ....+|++.+.||+|+||.||+|.+..+++.||||++....   ....+|+.+++.++|+|+     +++++++..    
T Consensus        63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~ni-----v~l~~~~~~~~~~  134 (440)
T PTZ00036         63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINI-----IFLKDYYYTECFK  134 (440)
T ss_pred             CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCC-----cceeeeEeecccc
Confidence            34578999999999999999999999999999999886432   234579999999999888     888877632    


Q ss_pred             ----CCeEEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCc
Q 013678          165 ----RNHICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  238 (438)
Q Consensus       165 ----~~~~~lv~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df  238 (438)
                          ...+++||||++++|.+++..  .....+++..++.++.||+.||+|||++||+||||||+|||++.++       
T Consensus       135 ~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~-------  207 (440)
T PTZ00036        135 KNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNT-------  207 (440)
T ss_pred             cCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCC-------
Confidence                235789999998889888763  2235799999999999999999999999999999999999996432       


Q ss_pred             cccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCC
Q 013678          239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       239 ~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~  315 (438)
                                         ..+||+|||+|......  .....||+.|+|||++.+. .++.++|||||||++|||++|.
T Consensus       208 -------------------~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~  268 (440)
T PTZ00036        208 -------------------HTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGY  268 (440)
T ss_pred             -------------------CceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence                               24788888887654322  2335789999999998765 6899999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      +||.+.+..+.+..+.+.++.++............       ...++...              ...+....+...+.++
T Consensus       269 ~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~-------~~~~~~~~--------------~~~l~~~~p~~~~~~~  327 (440)
T PTZ00036        269 PIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYA-------DIKFPDVK--------------PKDLKKVFPKGTPDDA  327 (440)
T ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhh-------cccCCccC--------------chhHHHHhccCCCHHH
Confidence            99999999899999988888877654432211100       01111100              0011111233467789


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          396 IDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .+||.+||++||.+|+|+.|+|+||||.+-
T Consensus       328 ~~li~~~L~~dP~~R~ta~e~l~hp~f~~~  357 (440)
T PTZ00036        328 INFISQFLKYEPLKRLNPIEALADPFFDDL  357 (440)
T ss_pred             HHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence            999999999999999999999999999764

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=2.9e-48  Score=364.98  Aligned_cols=255  Identities=23%  Similarity=0.358  Sum_probs=208.1

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .|++.+.||+|+||.||+|.+..+++.||+|++....    .....+.+|+.++..++|+++     +.+++++.+.+..
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i-----v~~~~~~~~~~~~   75 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFV-----VSLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcE-----EEEEEEEccCCeE
Confidence            3788999999999999999999999999999986432    223456789999999988877     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |+||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++                
T Consensus        76 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~----------------  139 (285)
T cd05631          76 CLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRG----------------  139 (285)
T ss_pred             EEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC----------------
Confidence            9999999 99999888765445689999999999999999999999999999999999996655                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                 .++|+|||++......  .....||..|+|||++.+..++.++|||||||++|+|++|+.||...+...
T Consensus       140 -----------~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~  208 (285)
T cd05631         140 -----------HIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV  208 (285)
T ss_pred             -----------CEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch
Confidence                       5677777777654322  123578999999999999999999999999999999999999998765433


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+......                                              .........+.++.+||++||+.
T Consensus       209 ~~~~~~~~~~~----------------------------------------------~~~~~~~~~s~~~~~li~~~l~~  242 (285)
T cd05631         209 KREEVDRRVKE----------------------------------------------DQEEYSEKFSEDAKSICRMLLTK  242 (285)
T ss_pred             hHHHHHHHhhc----------------------------------------------ccccCCccCCHHHHHHHHHHhhc
Confidence            22222211100                                              00112234577899999999999


Q ss_pred             CCCCCCC-----HHHHhcCCCCCCC
Q 013678          406 DPAERLK-----AREALRHPFFTRD  425 (438)
Q Consensus       406 dP~~Rpt-----a~ell~hp~f~~~  425 (438)
                      ||.+|+|     ++++++||||.+.
T Consensus       243 ~P~~R~~~~~~~~~~~~~h~~~~~~  267 (285)
T cd05631         243 NPKERLGCRGNGAAGVKQHPIFKNI  267 (285)
T ss_pred             CHHHhcCCCCCCHHHHhcCHhhcCC
Confidence            9999997     9999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.2e-48  Score=374.24  Aligned_cols=244  Identities=25%  Similarity=0.427  Sum_probs=203.4

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEc
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e  173 (438)
                      +.||+|+||.||+|.+..+|+.||||+++...    .....+.+|+.+++.++|++|     +++++++..++.+|||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i-----~~~~~~~~~~~~~~lv~e   75 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFL-----TALKYSFQTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC-----CCEEEEEEcCCEEEEEEe
Confidence            46899999999999999999999999997532    233456789999999998887     999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCccc
Q 013678          174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  252 (438)
Q Consensus       174 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~  252 (438)
                      |+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++                     
T Consensus        76 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~---------------------  132 (323)
T cd05571          76 YANGGELFFHLSRER--VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDG---------------------  132 (323)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC---------------------
Confidence            99 999999998654  789999999999999999999999999999999999997655                     


Q ss_pred             CCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013678          253 NLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  329 (438)
Q Consensus       253 ~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~  329 (438)
                            .+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||...+.......
T Consensus       133 ------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~  206 (323)
T cd05571         133 ------HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL  206 (323)
T ss_pred             ------CEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHH
Confidence                  46677777665421   122335799999999999999999999999999999999999999987665444433


Q ss_pred             HHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCC
Q 013678          330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  409 (438)
Q Consensus       330 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  409 (438)
                      +.....                                                  ..+..+++++.+||.+||+.||++
T Consensus       207 ~~~~~~--------------------------------------------------~~p~~~~~~~~~li~~~L~~dP~~  236 (323)
T cd05571         207 ILMEEI--------------------------------------------------RFPRTLSPEAKSLLAGLLKKDPKQ  236 (323)
T ss_pred             HHcCCC--------------------------------------------------CCCCCCCHHHHHHHHHHccCCHHH
Confidence            321100                                                  112345778999999999999999


Q ss_pred             CC-----CHHHHhcCCCCCCC
Q 013678          410 RL-----KAREALRHPFFTRD  425 (438)
Q Consensus       410 Rp-----ta~ell~hp~f~~~  425 (438)
                      ||     ++.++++||||++.
T Consensus       237 R~~~~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         237 RLGGGPEDAKEIMEHRFFASI  257 (323)
T ss_pred             cCCCCCCCHHHHHcCCCcCCC
Confidence            99     89999999999873

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=7e-48  Score=373.43  Aligned_cols=253  Identities=25%  Similarity=0.415  Sum_probs=199.5

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ..|+++++||+|+||.||+|++..+++.||||++...  ......+.+|+.+++.++|+||     +++++++...+.++
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~  148 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNV-----VKCHDMFDHNGEIQ  148 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCc-----ceeeeEeccCCeEE
Confidence            5678899999999999999999999999999998643  2345678899999999998887     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+.      ...++..+..++.||+.||+|||++||+||||||+|||++.++                 
T Consensus       149 lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-----------------  205 (353)
T PLN00034        149 VLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAK-----------------  205 (353)
T ss_pred             EEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC-----------------
Confidence            999999 8888643      2467788899999999999999999999999999999997665                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhC-----CCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                .+||+|||++......   ....+||..|+|||++..     ...+.++|||||||++|||++|+.||..
T Consensus       206 ----------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~  275 (353)
T PLN00034        206 ----------NVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGV  275 (353)
T ss_pred             ----------CEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence                      4666666666543322   223578999999998753     2245789999999999999999999974


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      ....+....+.......                                              .......++.++.+||.
T Consensus       276 ~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~l~~li~  309 (353)
T PLN00034        276 GRQGDWASLMCAICMSQ----------------------------------------------PPEAPATASREFRHFIS  309 (353)
T ss_pred             CCCccHHHHHHHHhccC----------------------------------------------CCCCCCccCHHHHHHHH
Confidence            33222211111110000                                              00112345678999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          401 GLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      +||+.||++|||+.|+|+||||.+...+
T Consensus       310 ~~l~~~P~~Rpt~~ell~hp~~~~~~~~  337 (353)
T PLN00034        310 CCLQREPAKRWSAMQLLQHPFILRAQPG  337 (353)
T ss_pred             HHccCChhhCcCHHHHhcCcccccCCcc
Confidence            9999999999999999999999997544

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.2e-49  Score=360.33  Aligned_cols=257  Identities=28%  Similarity=0.455  Sum_probs=222.8

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      ..+..||++.+.||+|.||.|-+|++...|+.||||.++++.    ...-.+.+||+|+..|+||+|     +.+|++|+
T Consensus        49 hnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhI-----I~IyEVFE  123 (668)
T KOG0611|consen   49 HNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHI-----IQIYEVFE  123 (668)
T ss_pred             cchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCce-----eehhhhhc
Confidence            356689999999999999999999999999999999997643    233456789999999999988     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      +.+.+.|||||. +|.|+||+.+.+  .+++.+++.+++||++|+.|||.++++|||||.+|||++.++           
T Consensus       124 NkdKIvivMEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~-----------  190 (668)
T KOG0611|consen  124 NKDKIVIVMEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNN-----------  190 (668)
T ss_pred             CCceEEEEEEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCC-----------
Confidence            999999999999 999999999876  899999999999999999999999999999999999996655           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCC-CcchhHHHHHHHHHHHHhCCCCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                      ++||+|||++......  ..+++|++.|.+||++.|.+| ++.+|.|||||+||.|+.|..||.
T Consensus       191 ----------------NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFD  254 (668)
T KOG0611|consen  191 ----------------NIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFD  254 (668)
T ss_pred             ----------------CeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccC
Confidence                            6788888887665443  366899999999999999997 589999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      +.+....+.+|.+.-..-|                                                   ..+.++.-||
T Consensus       255 G~Dhk~lvrQIs~GaYrEP---------------------------------------------------~~PSdA~gLI  283 (668)
T KOG0611|consen  255 GRDHKRLVRQISRGAYREP---------------------------------------------------ETPSDASGLI  283 (668)
T ss_pred             CchHHHHHHHhhcccccCC---------------------------------------------------CCCchHHHHH
Confidence            9988877777754322111                                                   2234678999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          400 QGLLRYDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      +.||..||++|.|+++|.+|-|++=....+
T Consensus       284 RwmLmVNP~RRATieDiAsHWWvNwgy~~~  313 (668)
T KOG0611|consen  284 RWMLMVNPERRATIEDIASHWWVNWGYNMP  313 (668)
T ss_pred             HHHHhcCcccchhHHHHhhhheeecccccc
Confidence            999999999999999999999997655443

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=2.6e-47  Score=369.91  Aligned_cols=302  Identities=27%  Similarity=0.435  Sum_probs=229.5

Q ss_pred             CceeeecCC---ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCc
Q 013678           80 GHYVFAIGE---NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGT  153 (438)
Q Consensus        80 ~~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~  153 (438)
                      ++|.+..++   .+.++|++.+.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.++|+|+   
T Consensus         2 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni---   78 (355)
T cd07874           2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI---   78 (355)
T ss_pred             cceeeccCchhhhhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCch---
Confidence            345666666   3568999999999999999999999999999999998642   2334567789999999999888   


Q ss_pred             ceEEecceeccC------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEE
Q 013678          154 RCVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL  227 (438)
Q Consensus       154 ~iv~~~~~~~~~------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli  227 (438)
                        +++++++...      ..+|+||||+.++|.+.+..    .+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus        79 --v~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill  152 (355)
T cd07874          79 --ISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV  152 (355)
T ss_pred             --hceeeeeeccccccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE
Confidence              8998887543      36899999997788887753    48899999999999999999999999999999999999


Q ss_pred             ecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHH
Q 013678          228 VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVG  305 (438)
Q Consensus       228 ~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  305 (438)
                      +.++                           .+||+|||++......  .....||..|+|||++.+..++.++||||||
T Consensus       153 ~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG  205 (355)
T cd07874         153 KSDC---------------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG  205 (355)
T ss_pred             CCCC---------------------------CEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHH
Confidence            7655                           4677777776654332  2235789999999999998999999999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhh
Q 013678          306 CILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  385 (438)
Q Consensus       306 ~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (438)
                      |++|+|++|+.||.+.+..+....+.+.++.++.++..........+........  . ...+    .... ........
T Consensus       206 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~----~~~~-~~~~~~~~  277 (355)
T cd07874         206 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYA--G-LTFP----KLFP-DSLFPADS  277 (355)
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccc--c-ccch----hhcc-cccccccc
Confidence            9999999999999998888888888887777776665554433333332211100  0 0000    0000 00000011


Q ss_pred             hccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       386 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      ......+.++++||.+||+.||++|||+.|+|+||||...
T Consensus       278 ~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         278 EHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             ccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence            1122345688999999999999999999999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.6e-48  Score=370.73  Aligned_cols=258  Identities=27%  Similarity=0.389  Sum_probs=215.0

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++++.||+|+||.||+|++..+++.||||+++...    .....+.+|+.++..++|++|     +++++++...+.
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----v~~~~~~~~~~~   75 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWL-----VKLLYAFQDDEY   75 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCC-----ccEEEEEEcCCE
Confidence            46899999999999999999999999999999997532    234567789999999988887     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++               
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~---------------  138 (333)
T cd05600          76 LYLAMEYVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG---------------  138 (333)
T ss_pred             EEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC---------------
Confidence            99999999 999999997654  689999999999999999999999999999999999996654               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                                  .+||+|||++...........||+.|+|||++.+..++.++|||||||++|||++|..||...+..+.
T Consensus       139 ------------~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~  206 (333)
T cd05600         139 ------------HIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET  206 (333)
T ss_pred             ------------CEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH
Confidence                        57888888877655544556899999999999999999999999999999999999999988776665


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      ...+......+                      ..+..                    ......++.++.+||.+||..+
T Consensus       207 ~~~i~~~~~~~----------------------~~~~~--------------------~~~~~~~s~~~~~li~~~l~~~  244 (333)
T cd05600         207 WENLKYWKETL----------------------QRPVY--------------------DDPRFNLSDEAWDLITKLINDP  244 (333)
T ss_pred             HHHHHhccccc----------------------cCCCC--------------------CccccccCHHHHHHHHHHhhCh
Confidence            54443211000                      00000                    0000245678999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 013678          407 PAERLKAREALRHPFFTRD  425 (438)
Q Consensus       407 P~~Rpta~ell~hp~f~~~  425 (438)
                      |.+|+|+.++++||||++.
T Consensus       245 ~~rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         245 SRRFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             hhhcCCHHHHHhCcccCCC
Confidence            9999999999999999874

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=1.4e-47  Score=372.54  Aligned_cols=279  Identities=23%  Similarity=0.301  Sum_probs=212.2

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++++.||+|+||+||+|++..+++.||||++++..    .....+.+|+.++..++|+++     +++++.+.+...
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~i-----v~~~~~~~~~~~   75 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWV-----VKMFYSFQDKLN   75 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCc-----ceEEEEEecCCe
Confidence            46899999999999999999999999999999997532    233556789999999988877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||||| +++|.+++.+..  .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~  153 (363)
T cd05628          76 LYLIMEFLPGGDMMTLLMKKD--TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK  153 (363)
T ss_pred             EEEEEcCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence            99999999 999999998754  799999999999999999999999999999999999999999988888888764332


Q ss_pred             CCCcccCCCCCCCeEEecCCCCccc------------CCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFE------------HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg  314 (438)
                      ....... .........|+......            .......+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus       154 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G  232 (363)
T cd05628         154 AHRTEFY-RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG  232 (363)
T ss_pred             ccccccc-ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhC
Confidence            1100000 00000001111111000            0011235899999999999999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      ..||.+.+..+....+......+                      .+|                        ....++++
T Consensus       233 ~~Pf~~~~~~~~~~~i~~~~~~~----------------------~~p------------------------~~~~~s~~  266 (363)
T cd05628         233 YPPFCSETPQETYKKVMNWKETL----------------------IFP------------------------PEVPISEK  266 (363)
T ss_pred             CCCCCCCCHHHHHHHHHcCcCcc----------------------cCC------------------------CcCCCCHH
Confidence            99998877666555443311100                      000                        01134678


Q ss_pred             HHHHHHHccccCCC---CCCCHHHHhcCCCCCCC
Q 013678          395 LIDLLQGLLRYDPA---ERLKAREALRHPFFTRD  425 (438)
Q Consensus       395 l~~ll~~~L~~dP~---~Rpta~ell~hp~f~~~  425 (438)
                      +.+||.+|+. +|.   .||+++|+++||||++.
T Consensus       267 ~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~  299 (363)
T cd05628         267 AKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV  299 (363)
T ss_pred             HHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence            9999999775 454   45899999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.6e-49  Score=343.01  Aligned_cols=253  Identities=29%  Similarity=0.485  Sum_probs=214.5

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---------hhhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      .+|.-.+.||.|..++|-++.++.+|..+|+|++.-.         ....+....|+.||+++.    +||+|+++.++|
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~----GHP~II~l~D~y   92 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVM----GHPYIIDLQDVY   92 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhc----CCCcEEEeeeec
Confidence            5677888999999999999999999999999998521         123466678999999986    557779999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      +.+..+++|+|.| .|.|.|++...-  .+++...++|++|++.|++|||.++||||||||+|||+++            
T Consensus        93 es~sF~FlVFdl~prGELFDyLts~V--tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILldd------------  158 (411)
T KOG0599|consen   93 ESDAFVFLVFDLMPRGELFDYLTSKV--TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDD------------  158 (411)
T ss_pred             cCcchhhhhhhhcccchHHHHhhhhe--eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeecc------------
Confidence            9999999999999 999999998775  8999999999999999999999999999999999999954            


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhC------CCCCcchhHHHHHHHHHHHHh
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILG------LGWNYPCDLWSVGCILVELCS  313 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~ellt  313 (438)
                                     +.+++|+|||+|.......  ...+||+.|.|||.+.-      .+|+..+|+||+|||+|.|+.
T Consensus       159 ---------------n~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLa  223 (411)
T KOG0599|consen  159 ---------------NMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLA  223 (411)
T ss_pred             ---------------ccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHc
Confidence                           4578888888887765544  34799999999999863      258899999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchh
Q 013678          314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  393 (438)
Q Consensus       314 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (438)
                      |.+||......-.+..|.+.-..+.                                              .+.+.+++.
T Consensus       224 GcpPFwHRkQmlMLR~ImeGkyqF~----------------------------------------------speWadis~  257 (411)
T KOG0599|consen  224 GCPPFWHRKQMLMLRMIMEGKYQFR----------------------------------------------SPEWADISA  257 (411)
T ss_pred             CCCchhHHHHHHHHHHHHhcccccC----------------------------------------------Ccchhhccc
Confidence            9999988766666666655322211                                              122345677


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALRHPFFT  423 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~hp~f~  423 (438)
                      ..+|||.+||+.||.+|+|++|+|+||||.
T Consensus       258 ~~KdLIsrlLqVdp~~Ritake~LaHpff~  287 (411)
T KOG0599|consen  258 TVKDLISRLLQVDPTKRITAKEALAHPFFI  287 (411)
T ss_pred             cHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence            899999999999999999999999999993

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=6.5e-47  Score=368.27  Aligned_cols=300  Identities=27%  Similarity=0.447  Sum_probs=228.0

Q ss_pred             ceeeecCC---ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcc
Q 013678           81 HYVFAIGE---NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR  154 (438)
Q Consensus        81 ~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~  154 (438)
                      .+.+..++   .+.++|++.+.||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.++|+|+    
T Consensus        10 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i----   85 (364)
T cd07875          10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI----   85 (364)
T ss_pred             ceeeecCcchhchhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCc----
Confidence            44444444   3468999999999999999999999999999999998642   2344567789999999999887    


Q ss_pred             eEEecceeccC------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe
Q 013678          155 CVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  228 (438)
Q Consensus       155 iv~~~~~~~~~------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~  228 (438)
                       +++++++...      ..+|+||||++++|.+.+..    .+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus        86 -i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~  160 (364)
T cd07875          86 -IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  160 (364)
T ss_pred             -cccceeecccccccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEEC
Confidence             8888876543      46899999998889888753    488999999999999999999999999999999999997


Q ss_pred             cCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHH
Q 013678          229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGC  306 (438)
Q Consensus       229 ~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  306 (438)
                      .++                           .+||+|||++.......  ....||..|+|||++.+..++.++|||||||
T Consensus       161 ~~~---------------------------~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~  213 (364)
T cd07875         161 SDC---------------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC  213 (364)
T ss_pred             CCC---------------------------cEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHH
Confidence            655                           56777777776543322  2357899999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhh
Q 013678          307 ILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ  386 (438)
Q Consensus       307 il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (438)
                      ++|+|++|+.||.+.+..+....+...++.++..+..........+........-.       ......... .......
T Consensus       214 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~  285 (364)
T cd07875         214 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGY-------SFEKLFPDV-LFPADSE  285 (364)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCC-------ChHhhCccc-ccccccc
Confidence            99999999999999998888888888888877766555443333332221110000       000000000 0000011


Q ss_pred             ccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       387 ~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      .....+.++++||.+||+.||.+|||+.|+|+||||..
T Consensus       286 ~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         286 HNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             ccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence            11223568899999999999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=3.5e-47  Score=361.90  Aligned_cols=284  Identities=28%  Similarity=0.488  Sum_probs=224.3

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ++|++.++||+|+||.||+|++..+++.||+|.++...  .....+.+|+.+++.++|+|+     +++++++..++..|
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~   80 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI-----VTLHDIVHTDKSLT   80 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCc-----ceEEEEEeeCCeEE
Confidence            67999999999999999999999999999999987432  233457789999999998887     99999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      +||||+.++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++                  
T Consensus        81 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~------------------  141 (309)
T cd07872          81 LVFEYLDKDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERG------------------  141 (309)
T ss_pred             EEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC------------------
Confidence            999999779999887654 4589999999999999999999999999999999999997655                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                               .++|+|||++......   .....+|..|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+
T Consensus       142 ---------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~  212 (309)
T cd07872         142 ---------ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED  212 (309)
T ss_pred             ---------CEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence                     4666666666543221   1224678999999998764 58899999999999999999999999988888


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..+.+.++.++...+........ +..    ...+.               ..+.........++.++.+||.+||+.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~---------------~~~~~~~~~~~~~~~~~~~li~~~L~~  272 (309)
T cd07872         213 ELHLIFRLLGTPTEETWPGISSNDE-FKN----YNFPK---------------YKPQPLINHAPRLDTEGIELLTKFLQY  272 (309)
T ss_pred             HHHHHHHHhCCCCHHHHhhhcchhh-hhh----hhcCc---------------cCCCchhhhccCCCHHHHHHHHHhccC
Confidence            8888888888777655433221110 000    00000               000111122345677899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      ||.+|||+.|+++||||+....+
T Consensus       273 dp~~R~t~~e~l~h~~~~~~~~~  295 (309)
T cd07872         273 ESKKRISAEEAMKHAYFRSLGTR  295 (309)
T ss_pred             ChhhCCCHHHHhcChhhhhcccc
Confidence            99999999999999999976543

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=2.4e-47  Score=372.34  Aligned_cols=281  Identities=26%  Similarity=0.438  Sum_probs=221.4

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC---
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN---  166 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~---  166 (438)
                      .|++.++||+|+||.||+|.+..+++.||||++...   ......+.+|+.+++.++|+|+     +++++++...+   
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~   75 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV-----LSALDILQPPHIDP   75 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCc-----CCHhheecCCCccc
Confidence            367899999999999999999999999999998642   2234567889999999998887     99999988766   


Q ss_pred             --eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          167 --HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       167 --~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                        .+|+||||++++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.            
T Consensus        76 ~~~~~lv~e~~~~~l~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~------------  141 (372)
T cd07853          76 FEEIYVVTELMQSDLHKIIVSPQ--PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCV------------  141 (372)
T ss_pred             cceEEEEeeccccCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCC------------
Confidence              899999999889999886654  7999999999999999999999999999999999999976664            


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                     +||+|||++......    .....+|..|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus       142 ---------------~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  206 (372)
T cd07853         142 ---------------LKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQ  206 (372)
T ss_pred             ---------------EEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCC
Confidence                           566666655433221    1224678999999999875 47899999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      +.+..+++..+...+|..+...+.........++...... .+                 ............++++.+||
T Consensus       207 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~~~~~~~~~~~~li  268 (372)
T cd07853         207 AQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHK-PP-----------------SLPVLYTLSSQATHEAVHLL  268 (372)
T ss_pred             CCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCC-CC-----------------chHHhcccCCCCCHHHHHHH
Confidence            9999999999999988877655443322222222111000 00                 00001112234577899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          400 QGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .+||+.||++|||+.|+|+||||++.
T Consensus       269 ~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         269 CRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             HHhCCCChhhCcCHHHHhcCHhhCCC
Confidence            99999999999999999999999884

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-48  Score=363.11  Aligned_cols=260  Identities=25%  Similarity=0.444  Sum_probs=230.2

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+++-|.+.+.||+|.|+.|-+|++.-||+.||||++.+.+   -....+..|++.|+.++|+||     |++|++.+..
T Consensus        15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNi-----VRLYEViDTQ   89 (864)
T KOG4717|consen   15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNI-----VRLYEVIDTQ   89 (864)
T ss_pred             ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCe-----eeeeehhccc
Confidence            45677999999999999999999999999999999997643   345677889999999999988     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      ..+|||+|+- +|+|+|||.++. ..+.++.+++|+.||+.|+.|+|+..+|||||||+||.+.+               
T Consensus        90 TKlyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFE---------------  153 (864)
T KOG4717|consen   90 TKLYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFE---------------  153 (864)
T ss_pred             ceEEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEee---------------
Confidence            9999999999 999999998776 57999999999999999999999999999999999998854               


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccC--CCCcccccCCCcchhHHHhCCCCC-cchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                 +-+-+||.|||++....  ..-.+.+|+..|-|||+++|..|+ +++||||||||||-|+.|++||+..
T Consensus       154 -----------KlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA  222 (864)
T KOG4717|consen  154 -----------KLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA  222 (864)
T ss_pred             -----------ecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccc
Confidence                       34457888888775433  334567999999999999999987 7899999999999999999999999


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      ++.+.+.+|..+-...|.                                                  .++.++++||..
T Consensus       223 NDSETLTmImDCKYtvPs--------------------------------------------------hvS~eCrdLI~s  252 (864)
T KOG4717|consen  223 NDSETLTMIMDCKYTVPS--------------------------------------------------HVSKECRDLIQS  252 (864)
T ss_pred             cchhhhhhhhcccccCch--------------------------------------------------hhhHHHHHHHHH
Confidence            999999998877666654                                                  457899999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCCCCce
Q 013678          402 LLRYDPAERLKAREALRHPFFTRDVRRPT  430 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f~~~~~~~~  430 (438)
                      ||+.||.+|.|.+||..|+|++...+.++
T Consensus       253 MLvRdPkkRAslEeI~s~~Wlq~~D~~~s  281 (864)
T KOG4717|consen  253 MLVRDPKKRASLEEIVSTSWLQAGDRGLS  281 (864)
T ss_pred             HHhcCchhhccHHHHhccccccCCCCCcc
Confidence            99999999999999999999998766544

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-48  Score=341.46  Aligned_cols=268  Identities=26%  Similarity=0.434  Sum_probs=220.6

Q ss_pred             ccCCceEEE-eeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc---
Q 013678           89 NLTPRCKIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY---  164 (438)
Q Consensus        89 ~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~---  164 (438)
                      .+.+.|++. ++||-|-.|.|..|.++.|++.+|+|++...    ..+.+|++..-..+    +|+|||.++++|++   
T Consensus        58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s----~h~~iV~IidVyeNs~~  129 (400)
T KOG0604|consen   58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMAS----GHPHIVSIIDVYENSYQ  129 (400)
T ss_pred             cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhc----CCCceEEeehhhhhhcc
Confidence            356777775 5799999999999999999999999997543    45677888765544    45677999999875   


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          165 -RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       165 -~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                       ...+.||||.+ ||.|++.++.++...+++.++..|++||..|+.|||+.+|.||||||+|+|++..+           
T Consensus       130 ~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~-----------  198 (400)
T KOG0604|consen  130 GRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTS-----------  198 (400)
T ss_pred             CceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCC-----------
Confidence             45789999999 99999999999888899999999999999999999999999999999999997654           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCC--CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                   .+..+||+|||+|+....  ...+.+-|++|.|||++....|+..+|+||+||++|-|+.|.+||.+
T Consensus       199 -------------~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS  265 (400)
T KOG0604|consen  199 -------------PNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS  265 (400)
T ss_pred             -------------CCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccc
Confidence                         466799999999988663  33456889999999999999999999999999999999999999987


Q ss_pred             CChHH----HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          321 HENLE----HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       321 ~~~~~----~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      .....    ....|......+|+                                              +.++.+|+..+
T Consensus       266 ~hg~aispgMk~rI~~gqy~FP~----------------------------------------------pEWs~VSe~aK  299 (400)
T KOG0604|consen  266 NHGLAISPGMKRRIRTGQYEFPE----------------------------------------------PEWSCVSEAAK  299 (400)
T ss_pred             cCCccCChhHHhHhhccCccCCC----------------------------------------------hhHhHHHHHHH
Confidence            54422    22222222222222                                              22356788999


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCCCCCceeeee
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVA  434 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~~~~~~~  434 (438)
                      |+|+++|..+|.+|.|+.++++|||+.+...-|...+.
T Consensus       300 dlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tpl~  337 (400)
T KOG0604|consen  300 DLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTPLS  337 (400)
T ss_pred             HHHHHHhcCCchhheeHHHhhcCchhcccccCCCCCch
Confidence            99999999999999999999999999987766654443

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-47  Score=373.94  Aligned_cols=280  Identities=25%  Similarity=0.391  Sum_probs=214.6

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++++.||+|+||.||+|++..+++.||||++....    .....+.+|+.++..++|++|     +++++++.++++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~i-----v~~~~~~~~~~~   75 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWV-----VKLYYSFQDENY   75 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC-----cceEEEEEcCCe
Confidence            36899999999999999999999999999999997532    233456789999999988877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||||| +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++.....
T Consensus        76 ~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  153 (364)
T cd05599          76 LYLIMEYLPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK  153 (364)
T ss_pred             EEEEECCCCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence            99999999 999999998754  699999999999999999999999999999999999999999999999988764332


Q ss_pred             CCCc--ccCCCCCCCeEEecCCCCcccCC------------CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHH
Q 013678          247 DGSY--FKNLPKSSAIKLIDFGSTTFEHQ------------DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC  312 (438)
Q Consensus       247 ~~~~--~~~~~~~~~~kl~Dfg~a~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell  312 (438)
                      ....  ..........-..++........            .....+||+.|+|||++.+..++.++|||||||++|||+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~  233 (364)
T cd05599         154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML  233 (364)
T ss_pred             cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence            1110  00000000000011111100000            111247999999999999999999999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCch
Q 013678          313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  392 (438)
Q Consensus       313 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (438)
                      +|..||.+.+..+....+......                      ...+                        ....++
T Consensus       234 ~G~~Pf~~~~~~~~~~~i~~~~~~----------------------~~~~------------------------~~~~~s  267 (364)
T cd05599         234 VGYPPFCSDNPQETYRKIINWKET----------------------LQFP------------------------DEVPLS  267 (364)
T ss_pred             cCCCCCCCCCHHHHHHHHHcCCCc----------------------cCCC------------------------CCCCCC
Confidence            999999887765544433221100                      0000                        111346


Q ss_pred             hHHHHHHHHccccCCCCCCC---HHHHhcCCCCCCC
Q 013678          393 GDLIDLLQGLLRYDPAERLK---AREALRHPFFTRD  425 (438)
Q Consensus       393 ~~l~~ll~~~L~~dP~~Rpt---a~ell~hp~f~~~  425 (438)
                      +++.+||.+||. ||.+|++   +.|+++||||+..
T Consensus       268 ~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         268 PEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             HHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            789999999997 9999998   9999999999864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=3.4e-47  Score=358.27  Aligned_cols=278  Identities=31%  Similarity=0.517  Sum_probs=213.0

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc-----
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-----  164 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-----  164 (438)
                      +|++.+.||+|+||.||+|++..+++.||+|.++...   .......+|+.+++.+.+-  .|+|++++++++..     
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~h~ni~~~~~~~~~~~~~~   78 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAF--DHPNIVRLMDVCATSRTDR   78 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhc--CCCCeeeeeeeeccccCCC
Confidence            5899999999999999999999999999999986422   2234566788888877532  34555999998764     


Q ss_pred             CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          165 RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       165 ~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      ...+++||||+.++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++             
T Consensus        79 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~-------------  145 (288)
T cd07863          79 ETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG-------------  145 (288)
T ss_pred             CceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC-------------
Confidence            3468999999977999999876545699999999999999999999999999999999999997665             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                    .+||+|||++......  .....||..|+|||++.+..++.++|||||||++|+|++|.+||.+..
T Consensus       146 --------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~  211 (288)
T cd07863         146 --------------QVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS  211 (288)
T ss_pred             --------------CEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCC
Confidence                          4666666666544322  123478999999999999899999999999999999999999999888


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ..+.+..+....+.+....+....             ..+.....          .............++..+.+||.+|
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~li~~~  268 (288)
T cd07863         212 EADQLGKIFDLIGLPPEDDWPRDV-------------TLPRGAFS----------PRGPRPVQSVVPEIEESGAQLLLEM  268 (288)
T ss_pred             HHHHHHHHHHHhCCCChhhCcccc-------------cccccccC----------CCCCCchHHhCcCcCHHHHHHHHHH
Confidence            888887777766654432211100             00000000          0000111122345677899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCC
Q 013678          403 LRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f  422 (438)
                      |++||++|||+.|+++||||
T Consensus       269 L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         269 LTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             hccCcccCCCHHHHhcCCCC
Confidence            99999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-50  Score=369.88  Aligned_cols=254  Identities=27%  Similarity=0.422  Sum_probs=213.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ..|+.++.||+|+||.||+|.+..+++.||+|++...  ....++...|+.+|..+++++|     .++|+.|..+..++
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~i-----t~yygsyl~g~~Lw   87 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNI-----TEYYGSYLKGTKLW   87 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchH-----HhhhhheeecccHH
Confidence            4578889999999999999999999999999999753  3345778899999999998877     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      ++|||| ||++.+.++...  .+.+..+..++++++.||.|||.++.+|||||+.|||+..+|                 
T Consensus        88 iiMey~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g-----------------  148 (467)
T KOG0201|consen   88 IIMEYCGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESG-----------------  148 (467)
T ss_pred             HHHHHhcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccC-----------------
Confidence            999999 999999998765  558899999999999999999999999999999999997766                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                .+||+|||.+......   ..+++||+.|||||++.+..|+.++||||||++.+||++|.+|+.......
T Consensus       149 ----------~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr  218 (467)
T KOG0201|consen  149 ----------DVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR  218 (467)
T ss_pred             ----------cEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce
Confidence                      5677777776554332   356799999999999998899999999999999999999999998766533


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..|-+   ..|                                              ......+++.+++||..||++
T Consensus       219 vlflIpk---~~P----------------------------------------------P~L~~~~S~~~kEFV~~CL~k  249 (467)
T KOG0201|consen  219 VLFLIPK---SAP----------------------------------------------PRLDGDFSPPFKEFVEACLDK  249 (467)
T ss_pred             EEEeccC---CCC----------------------------------------------CccccccCHHHHHHHHHHhhc
Confidence            3222211   000                                              011225678899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      ||+.||||.++|+|+|++...+.
T Consensus       250 ~P~~RpsA~~LLKh~FIk~a~k~  272 (467)
T KOG0201|consen  250 NPEFRPSAKELLKHKFIKRAKKT  272 (467)
T ss_pred             CcccCcCHHHHhhhHHHHhcCCc
Confidence            99999999999999999985443

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=3.3e-47  Score=364.42  Aligned_cols=250  Identities=25%  Similarity=0.376  Sum_probs=207.1

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      +|++++.||+|+||.||+|++..+++.||||++.+..    ...+.+..|+.++..+.|++    +++.+++++.+.+.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~----~i~~~~~~~~~~~~~   76 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPP----FLTQLHSCFQTMDRL   76 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCC----ceeeeEEEEEcCCEE
Confidence            4889999999999999999999999999999997532    33456678888888887653    358899999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |+||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.+|                
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~----------------  138 (324)
T cd05587          77 YFVMEYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEG----------------  138 (324)
T ss_pred             EEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCC----------------
Confidence            9999999 999999997654  689999999999999999999999999999999999997665                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                 .++|+|||++....   ......+||..|+|||++.+..++.++|||||||++|+|++|+.||.+.+..
T Consensus       139 -----------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~  207 (324)
T cd05587         139 -----------HIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED  207 (324)
T ss_pred             -----------CEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH
Confidence                       46667777654321   1223357999999999999999999999999999999999999999887766


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +....+......                                                  .+..++.++.+||.+||.
T Consensus       208 ~~~~~i~~~~~~--------------------------------------------------~~~~~~~~~~~li~~~l~  237 (324)
T cd05587         208 ELFQSIMEHNVS--------------------------------------------------YPKSLSKEAVSICKGLLT  237 (324)
T ss_pred             HHHHHHHcCCCC--------------------------------------------------CCCCCCHHHHHHHHHHhh
Confidence            655544332111                                                  112456789999999999


Q ss_pred             cCCCCCCCH-----HHHhcCCCCCCC
Q 013678          405 YDPAERLKA-----REALRHPFFTRD  425 (438)
Q Consensus       405 ~dP~~Rpta-----~ell~hp~f~~~  425 (438)
                      .||.+|+++     +++++||||++.
T Consensus       238 ~~P~~R~~~~~~~~~~~~~hp~~~~~  263 (324)
T cd05587         238 KHPAKRLGCGPTGERDIREHAFFRRI  263 (324)
T ss_pred             cCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            999999976     899999999863

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-47  Score=364.73  Aligned_cols=242  Identities=30%  Similarity=0.492  Sum_probs=201.6

Q ss_pred             eeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678          100 MGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      ||+|+||.||+|.+..+++.||+|+++..    ......+.+|+.++..++|+||     +++++++.+.+..|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~lv~e~~   75 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFI-----VPLKFSFQSPEKLYLVLAFI   75 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcE-----eceeeEEecCCeEEEEEcCC
Confidence            69999999999999999999999998753    2234556789999999988777     99999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCC
Q 013678          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  254 (438)
Q Consensus       176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~  254 (438)
                       +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++                       
T Consensus        76 ~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~-----------------------  130 (312)
T cd05585          76 NGGELFHHLQREG--RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQG-----------------------  130 (312)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCC-----------------------
Confidence             999999998754  699999999999999999999999999999999999997655                       


Q ss_pred             CCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 013678          255 PKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  331 (438)
Q Consensus       255 ~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~  331 (438)
                          .++|+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+.
T Consensus       131 ----~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~  206 (312)
T cd05585         131 ----HIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKIL  206 (312)
T ss_pred             ----cEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHH
Confidence                567777777654321   1223579999999999999999999999999999999999999998766554443332


Q ss_pred             HHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCC
Q 013678          332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  411 (438)
Q Consensus       332 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  411 (438)
                      ...                                                  ...+..+++++.+||.+||+.||++|+
T Consensus       207 ~~~--------------------------------------------------~~~~~~~~~~~~~li~~~L~~dp~~R~  236 (312)
T cd05585         207 QEP--------------------------------------------------LRFPDGFDRDAKDLLIGLLSRDPTRRL  236 (312)
T ss_pred             cCC--------------------------------------------------CCCCCcCCHHHHHHHHHHcCCCHHHcC
Confidence            110                                                  011234567899999999999999997


Q ss_pred             ---CHHHHhcCCCCCCC
Q 013678          412 ---KAREALRHPFFTRD  425 (438)
Q Consensus       412 ---ta~ell~hp~f~~~  425 (438)
                         ++.|+++||||++.
T Consensus       237 ~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         237 GYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             CCCCHHHHHcCCCcCCC
Confidence               58999999999974

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.2e-47  Score=367.49  Aligned_cols=281  Identities=28%  Similarity=0.523  Sum_probs=222.0

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+.++|++++.||+|+||.||+|.+..+++.||||++....   .....+.+|+.+++.++|+||     +++++++...
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~   86 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENV-----IGLLDVFTPA   86 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCch-----hhhhhhhccc
Confidence            34578999999999999999999999999999999986532   233556789999999998887     9998887532


Q ss_pred             ------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          166 ------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       166 ------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                            ...|++|++++++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++        
T Consensus        87 ~~~~~~~~~~~~~~~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~--------  155 (343)
T cd07878          87 TSIENFNEVYLVTNLMGADLNNIVKCQ---KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC--------  155 (343)
T ss_pred             ccccccCcEEEEeecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCC--------
Confidence                  468999999999999888643   599999999999999999999999999999999999997655        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                         .+||+|||++..........+||..|+|||++.+ ..++.++|||||||++|+|++|..||
T Consensus       156 -------------------~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf  216 (343)
T cd07878         156 -------------------ELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALF  216 (343)
T ss_pred             -------------------CEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCC
Confidence                               5677777777665555555689999999999987 46899999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhh-hhhhhcCCCcccCCCCCCChhhHHHHHHhccch-hhhhhccCCchhHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRR-AEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP-NLIMQHVDHSAGDLI  396 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~  396 (438)
                      .+.+..+.+..+....+..+.......... ...+....     +                ..+ ..........++.+.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----------------~~~~~~~~~~~~~~~~~~~  275 (343)
T cd07878         217 PGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSL-----P----------------HMPQQDLKKIFRGANPLAI  275 (343)
T ss_pred             CCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhcc-----c----------------cccchhHHHhccCCCHHHH
Confidence            998888888888887777665544322111 01110000     0                000 000111223456789


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      +||.+||+.||.+|||+.|+|+||||...
T Consensus       276 ~li~~mL~~dp~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         276 DLLEKMLVLDSDKRISASEALAHPYFSQY  304 (343)
T ss_pred             HHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence            99999999999999999999999999864

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=3.7e-47  Score=371.99  Aligned_cols=280  Identities=24%  Similarity=0.364  Sum_probs=211.3

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .|++++.||+|+||+||+|++..+++.||||++.+..    .....+.+|+.+++.++|++|     +++++++.+.+++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~i-----v~l~~~~~~~~~~   76 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWV-----VKLYYSFQDKDNL   76 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCe-----eeeEEEEecCCEE
Confidence            5899999999999999999999999999999997532    234567889999999988877     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+||||+.++.++|+|||++......
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~  154 (381)
T cd05626          77 YFVMDYIPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT  154 (381)
T ss_pred             EEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence            9999999 999999998754  6899999999999999999999999999999999999999999999999986533211


Q ss_pred             CC--cccC------CCCCC-----CeEEecCCCC-------cc---cCCCCcccccCCCcchhHHHhCCCCCcchhHHHH
Q 013678          248 GS--YFKN------LPKSS-----AIKLIDFGST-------TF---EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSV  304 (438)
Q Consensus       248 ~~--~~~~------~~~~~-----~~kl~Dfg~a-------~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  304 (438)
                      ..  .+..      .....     ....+.++..       ..   ........+||..|+|||++.+..++.++|||||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl  234 (381)
T cd05626         155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV  234 (381)
T ss_pred             cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence            10  0000      00000     0000111100       00   0001123579999999999999899999999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhh
Q 013678          305 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  384 (438)
Q Consensus       305 G~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (438)
                      ||++|||++|..||...+..+....+......+                      .                        
T Consensus       235 G~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~----------------------~------------------------  268 (381)
T cd05626         235 GVILFEMLVGQPPFLAPTPTETQLKVINWENTL----------------------H------------------------  268 (381)
T ss_pred             hhHHHHHHhCCCCCcCCCHHHHHHHHHcccccc----------------------C------------------------
Confidence            999999999999998766554443332211000                      0                        


Q ss_pred             hhccCCchhHHHHHHHHcc--ccCCCCCCCHHHHhcCCCCCCC
Q 013678          385 MQHVDHSAGDLIDLLQGLL--RYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       385 ~~~~~~~~~~l~~ll~~~L--~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      ......+++++.+||.+||  ..+|..|+++.|+++||||++.
T Consensus       269 ~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~  311 (381)
T cd05626         269 IPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV  311 (381)
T ss_pred             CCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence            0111245778999999955  4555569999999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-47  Score=373.51  Aligned_cols=278  Identities=24%  Similarity=0.357  Sum_probs=212.6

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|+++++||+|+||.||+|.+..+++.||||++.+..    ...+.+.+|+.++..+.|++|     +++++++.+.++
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i-----v~~~~~~~~~~~   75 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWV-----VSLYYSFQDAQY   75 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEEcCCe
Confidence            36899999999999999999999999999999986532    233556789999999888877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.++++|||++.....
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~  153 (377)
T cd05629          76 LYLIMEFLPGGDLMTMLIKYD--TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK  153 (377)
T ss_pred             eEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence            99999999 999999997654  789999999999999999999999999999999999999999999999998754322


Q ss_pred             CCCc--ccC----------CCCCCC-------------eEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhH
Q 013678          247 DGSY--FKN----------LPKSSA-------------IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDL  301 (438)
Q Consensus       247 ~~~~--~~~----------~~~~~~-------------~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  301 (438)
                      ....  +..          .+....             .++.+++.+...  .....+||+.|+|||++.+..++.++||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di  231 (377)
T cd05629         154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRL--MAYSTVGTPDYIAPEIFLQQGYGQECDW  231 (377)
T ss_pred             ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc--cccccCCCccccCHHHHccCCCCCceee
Confidence            1100  000          000000             001111111100  0112479999999999999899999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccch
Q 013678          302 WSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP  381 (438)
Q Consensus       302 wSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (438)
                      |||||++|||++|..||.+.+..+....+.....                      ...+|                   
T Consensus       232 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~----------------------~~~~p-------------------  270 (377)
T cd05629         232 WSLGAIMFECLIGWPPFCSENSHETYRKIINWRE----------------------TLYFP-------------------  270 (377)
T ss_pred             EecchhhhhhhcCCCCCCCCCHHHHHHHHHccCC----------------------ccCCC-------------------
Confidence            9999999999999999987766555444432110                      00111                   


Q ss_pred             hhhhhccCCchhHHHHHHHHccccCCCCC---CCHHHHhcCCCCCCC
Q 013678          382 NLIMQHVDHSAGDLIDLLQGLLRYDPAER---LKAREALRHPFFTRD  425 (438)
Q Consensus       382 ~~~~~~~~~~~~~l~~ll~~~L~~dP~~R---pta~ell~hp~f~~~  425 (438)
                           ....++.++.+||.+||. +|.+|   +|+.|+++||||++.
T Consensus       271 -----~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~  311 (377)
T cd05629         271 -----DDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV  311 (377)
T ss_pred             -----CCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence                 112356789999999998 77775   599999999999863

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-47  Score=370.88  Aligned_cols=280  Identities=26%  Similarity=0.392  Sum_probs=213.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++.+.||+|+||.||+|++..+++.||||+++...    .....+.+|+.++..+.|+++     +++++++.++++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~   75 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWI-----VKLYYSFQDEEH   75 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCc-----cchhhheecCCe
Confidence            47999999999999999999999999999999997532    334567789999999988877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~  153 (350)
T cd05573          76 LYLVMEYMPGGDLMNLLIRKD--VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNK  153 (350)
T ss_pred             EEEEEcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence            99999999 999999998763  799999999999999999999999999999999999999888777777777654332


Q ss_pred             CCCcccCCCCCCC-eEEecCC----CCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          247 DGSYFKNLPKSSA-IKLIDFG----STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       247 ~~~~~~~~~~~~~-~kl~Dfg----~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                      ............. .......    .............||+.|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~  233 (350)
T cd05573         154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD  233 (350)
T ss_pred             cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence            2210000000000 0000000    0000001112357899999999999999999999999999999999999999887


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +.......+.......                      ..                        .....+++++.+||.+
T Consensus       234 ~~~~~~~~i~~~~~~~----------------------~~------------------------p~~~~~~~~~~~li~~  267 (350)
T cd05573         234 TLQETYNKIINWKESL----------------------RF------------------------PPDPPVSPEAIDLICR  267 (350)
T ss_pred             CHHHHHHHHhccCCcc----------------------cC------------------------CCCCCCCHHHHHHHHH
Confidence            7655444443211000                      00                        0111257789999999


Q ss_pred             ccccCCCCCCC-HHHHhcCCCCCCC
Q 013678          402 LLRYDPAERLK-AREALRHPFFTRD  425 (438)
Q Consensus       402 ~L~~dP~~Rpt-a~ell~hp~f~~~  425 (438)
                      ||. ||.+|++ ++++++||||++.
T Consensus       268 ll~-dp~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         268 LLC-DPEDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             Hcc-ChhhcCCCHHHHhcCCCcCCC
Confidence            998 9999999 9999999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=7.2e-47  Score=363.07  Aligned_cols=303  Identities=23%  Similarity=0.293  Sum_probs=214.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .++|++++.||+|+||.||++++..++..||+|++...  ....+.+.+|+.+++.++|+|+     +++++++..++.+
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~   78 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI-----VGFYGAFYSDGEI   78 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCC-----CeEEEEEEECCEE
Confidence            47899999999999999999999999999999998753  2345678899999999998887     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      ++||||+ +++|.+++....  .+++..+..++.|++.||.|||++ +|+||||||+|||++.++               
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~---------------  141 (331)
T cd06649          79 SICMEHMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG---------------  141 (331)
T ss_pred             EEEeecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC---------------
Confidence            9999999 999999998754  689999999999999999999986 699999999999997766               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCC-CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                  .++|+|||++..... ......||..|+|||++.+..++.++|||||||++|+|++|+.||...+..+
T Consensus       142 ------------~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~  209 (331)
T cd06649         142 ------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE  209 (331)
T ss_pred             ------------cEEEccCcccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                        456666666554322 2233578999999999999899999999999999999999999997765544


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+............................ ..... .........................+++++++||.+||++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~  287 (331)
T cd06649         210 LEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSG-HGMDS-RPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIK  287 (331)
T ss_pred             HHHHhcccccccccCCccccCcccccccccccc-ccccc-ccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccC
Confidence            322221100000000000000000000000000 00000 0000000000000000000001124677899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          406 DPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      ||++|||+.|+++||||+......
T Consensus       288 ~P~~Rpt~~ell~h~~~~~~~~~~  311 (331)
T cd06649         288 NPAERADLKMLMNHTFIKRSEVEE  311 (331)
T ss_pred             CcccCCCHHHHhcChHHhhccccc
Confidence            999999999999999998765443

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=2e-47  Score=366.31  Aligned_cols=244  Identities=26%  Similarity=0.440  Sum_probs=202.6

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEc
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e  173 (438)
                      +.||+|+||.||+|++..+++.||+|++.+..    .....+.+|+.+++.+.|+++     +++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~~~~lv~E   75 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFL-----TSLKYSFQTKDRLCFVME   75 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC-----cceEEEEEcCCEEEEEEe
Confidence            46899999999999999999999999997532    234567789999999988887     999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCccc
Q 013678          174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  252 (438)
Q Consensus       174 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~  252 (438)
                      |+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++                     
T Consensus        76 y~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~---------------------  132 (328)
T cd05593          76 YVNGGELFFHLSRER--VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG---------------------  132 (328)
T ss_pred             CCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCC---------------------
Confidence            99 999999887654  799999999999999999999999999999999999997655                     


Q ss_pred             CCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013678          253 NLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  329 (438)
Q Consensus       253 ~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~  329 (438)
                            .+||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......
T Consensus       133 ------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~  206 (328)
T cd05593         133 ------HIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL  206 (328)
T ss_pred             ------cEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHH
Confidence                  467777776654221   12235799999999999998999999999999999999999999987665544333


Q ss_pred             HHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCC
Q 013678          330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  409 (438)
Q Consensus       330 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  409 (438)
                      +.....                                                  ..+..++.++.+||.+||+.||++
T Consensus       207 ~~~~~~--------------------------------------------------~~p~~~~~~~~~li~~~L~~dP~~  236 (328)
T cd05593         207 ILMEDI--------------------------------------------------KFPRTLSADAKSLLSGLLIKDPNK  236 (328)
T ss_pred             hccCCc--------------------------------------------------cCCCCCCHHHHHHHHHHcCCCHHH
Confidence            221100                                                  112345678999999999999999


Q ss_pred             CC-----CHHHHhcCCCCCCC
Q 013678          410 RL-----KAREALRHPFFTRD  425 (438)
Q Consensus       410 Rp-----ta~ell~hp~f~~~  425 (438)
                      |+     ++.|+++||||.+.
T Consensus       237 R~~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         237 RLGGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             cCCCCCCCHHHHhcCCCcCCC
Confidence            97     89999999999764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=2.7e-47  Score=373.23  Aligned_cols=278  Identities=27%  Similarity=0.411  Sum_probs=213.1

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      +|+++++||+|+||.||+|++..+++.||+|++.+..    .....+.+|+.+++.+.|++|     +++++.+.+++.+
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~i-----v~~~~~~~~~~~~   76 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWV-----VRLYYSFQDKDNL   76 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcC-----CeEEEEEEeCCEE
Confidence            6899999999999999999999999999999997532    234567789999999988877     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |+||||| +|+|.+++.+..  .+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++......
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~  154 (382)
T cd05625          77 YFVMDYIPGGDMMSLLIRMG--IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT  154 (382)
T ss_pred             EEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence            9999999 999999997754  6899999999999999999999999999999999999999999999999986532211


Q ss_pred             CC--cccCCCCCCCeEEecCCC---------------------Ccc-cCCCCcccccCCCcchhHHHhCCCCCcchhHHH
Q 013678          248 GS--YFKNLPKSSAIKLIDFGS---------------------TTF-EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWS  303 (438)
Q Consensus       248 ~~--~~~~~~~~~~~kl~Dfg~---------------------a~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS  303 (438)
                      ..  .... .....-...+|..                     +.. ........+||+.|+|||++.+..++.++||||
T Consensus       155 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS  233 (382)
T cd05625         155 HDSKYYQS-GDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS  233 (382)
T ss_pred             cccccccc-ccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEe
Confidence            10  0000 0000000001100                     000 000112357999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhh
Q 013678          304 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL  383 (438)
Q Consensus       304 lG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (438)
                      |||++|||++|..||.+.+..+....+......+                      .                       
T Consensus       234 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~----------------------~-----------------------  268 (382)
T cd05625         234 VGVILYEMLVGQPPFLAQTPLETQMKVINWQTSL----------------------H-----------------------  268 (382)
T ss_pred             chHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCc----------------------C-----------------------
Confidence            9999999999999998876655444332211000                      0                       


Q ss_pred             hhhccCCchhHHHHHHHHccccCCCCCCC---HHHHhcCCCCCCC
Q 013678          384 IMQHVDHSAGDLIDLLQGLLRYDPAERLK---AREALRHPFFTRD  425 (438)
Q Consensus       384 ~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt---a~ell~hp~f~~~  425 (438)
                       ......+++++.+||.+|+ .||.+|++   ++|+++||||+..
T Consensus       269 -~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~  311 (382)
T cd05625         269 -IPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI  311 (382)
T ss_pred             -CCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence             0111245778999999986 59999997   9999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=2.9e-47  Score=364.51  Aligned_cols=244  Identities=25%  Similarity=0.416  Sum_probs=201.5

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEc
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e  173 (438)
                      +.||+|+||.||++++..+|+.||+|+++...    .....+.+|+.+++.++|+++     +++++++...+.+|||||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----~~~~~~~~~~~~~~lv~E   75 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL-----TALKYAFQTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC-----cceeeEEecCCEEEEEEe
Confidence            46899999999999999999999999997532    233456789999999998887     999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCccc
Q 013678          174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  252 (438)
Q Consensus       174 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~  252 (438)
                      |+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.                    
T Consensus        76 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--------------------  133 (323)
T cd05595          76 YANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH--------------------  133 (323)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCC--------------------
Confidence            99 999999887654  7999999999999999999999999999999999999977664                    


Q ss_pred             CCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013678          253 NLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  329 (438)
Q Consensus       253 ~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~  329 (438)
                             +||+|||++.....   ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......
T Consensus       134 -------~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~  206 (323)
T cd05595         134 -------IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL  206 (323)
T ss_pred             -------EEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                   55555555443211   11234789999999999998999999999999999999999999987665554443


Q ss_pred             HHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCC
Q 013678          330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  409 (438)
Q Consensus       330 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  409 (438)
                      +.....                                                  ..+..+++++.+||.+||+.||++
T Consensus       207 ~~~~~~--------------------------------------------------~~p~~~~~~~~~li~~~L~~dP~~  236 (323)
T cd05595         207 ILMEEI--------------------------------------------------RFPRTLSPEAKSLLAGLLKKDPKQ  236 (323)
T ss_pred             HhcCCC--------------------------------------------------CCCCCCCHHHHHHHHHHccCCHHH
Confidence            321110                                                  112345678999999999999999


Q ss_pred             CC-----CHHHHhcCCCCCCC
Q 013678          410 RL-----KAREALRHPFFTRD  425 (438)
Q Consensus       410 Rp-----ta~ell~hp~f~~~  425 (438)
                      |+     ++.++++||||.+.
T Consensus       237 R~~~~~~~~~~~l~h~~~~~~  257 (323)
T cd05595         237 RLGGGPSDAKEVMEHRFFLSI  257 (323)
T ss_pred             hCCCCCCCHHHHHcCCCcCCC
Confidence            98     89999999999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=2.6e-47  Score=372.71  Aligned_cols=278  Identities=24%  Similarity=0.375  Sum_probs=211.6

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ..|+++++||+|+||.||+|++..+++.||||++.+..    .....+.+|+.++..+.|+++     +++++.+.+++.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~i-----v~~~~~~~~~~~   75 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWV-----VKLYYSFQDKDN   75 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCc-----ceEEEEEEcCCE
Confidence            36899999999999999999999999999999986532    234567789999999998887     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||||| +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus        76 ~~lv~E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~  153 (376)
T cd05598          76 LYFVMDYIPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW  153 (376)
T ss_pred             EEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence            99999999 999999998764  689999999999999999999999999999999999999999998999888643211


Q ss_pred             C--CCcccCCCCCCCeEEecCCCC---------------c---ccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHH
Q 013678          247 D--GSYFKNLPKSSAIKLIDFGST---------------T---FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC  306 (438)
Q Consensus       247 ~--~~~~~~~~~~~~~kl~Dfg~a---------------~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  306 (438)
                      .  ...+.. .........+....               .   .........+||+.|+|||++.+..++.++|||||||
T Consensus       154 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv  232 (376)
T cd05598         154 THDSKYYQK-GDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV  232 (376)
T ss_pred             ccccccccc-ccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccc
Confidence            0  000000 00000000000000               0   0000112357999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhh
Q 013678          307 ILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ  386 (438)
Q Consensus       307 il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (438)
                      ++|+|++|..||.+.+..+....+.......                                              ...
T Consensus       233 ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~----------------------------------------------~~~  266 (376)
T cd05598         233 ILYEMLVGQPPFLADTPAETQLKVINWETTL----------------------------------------------HIP  266 (376)
T ss_pred             eeeehhhCCCCCCCCCHHHHHHHHhccCccc----------------------------------------------cCC
Confidence            9999999999998876655443332110000                                              001


Q ss_pred             ccCCchhHHHHHHHHccccCCCCCC---CHHHHhcCCCCCC
Q 013678          387 HVDHSAGDLIDLLQGLLRYDPAERL---KAREALRHPFFTR  424 (438)
Q Consensus       387 ~~~~~~~~l~~ll~~~L~~dP~~Rp---ta~ell~hp~f~~  424 (438)
                      ....++.++.+||.+|+ .+|.+|+   |+.|+++||||+.
T Consensus       267 ~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~  306 (376)
T cd05598         267 SQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKG  306 (376)
T ss_pred             CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence            11245678899999977 5999999   9999999999986

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=1.1e-46  Score=360.70  Aligned_cols=250  Identities=24%  Similarity=0.384  Sum_probs=202.5

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      |++++.||+|+||.||+|.+..+++.||||++++..    ...+.+.+|+.++..+.  .+.|+|++++++++.+.+++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~--~l~hp~i~~~~~~~~~~~~~~   78 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETAN--SERHPFLVNLFACFQTEDHVC   78 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc--ccCCCChhceeeEEEcCCEEE
Confidence            688999999999999999999999999999997532    22345666776665443  123445599999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|..++...   .+++..+..++.||+.||+|||++||+||||||+|||++.++                 
T Consensus        79 lv~E~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~-----------------  138 (324)
T cd05589          79 FVMEYAAGGDLMMHIHTD---VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEG-----------------  138 (324)
T ss_pred             EEEcCCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC-----------------
Confidence            999999 99999888653   599999999999999999999999999999999999997766                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                .+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus       139 ----------~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~  208 (324)
T cd05589         139 ----------FVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE  208 (324)
T ss_pred             ----------cEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH
Confidence                      45666666654321   12234579999999999999899999999999999999999999998877665


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+......                                                  .+..++..+.+||.+||+.
T Consensus       209 ~~~~i~~~~~~--------------------------------------------------~p~~~~~~~~~li~~~L~~  238 (324)
T cd05589         209 VFDSIVNDEVR--------------------------------------------------YPRFLSREAISIMRRLLRR  238 (324)
T ss_pred             HHHHHHhCCCC--------------------------------------------------CCCCCCHHHHHHHHHHhhc
Confidence            55444321111                                                  1123567889999999999


Q ss_pred             CCCCCC-----CHHHHhcCCCCCCC
Q 013678          406 DPAERL-----KAREALRHPFFTRD  425 (438)
Q Consensus       406 dP~~Rp-----ta~ell~hp~f~~~  425 (438)
                      ||++||     ++.++++||||++.
T Consensus       239 dP~~R~~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         239 NPERRLGSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             CHhHcCCCCCCCHHHHhhCCCcCCC
Confidence            999999     79999999999863

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=5e-47  Score=362.38  Aligned_cols=244  Identities=25%  Similarity=0.389  Sum_probs=200.9

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +.||+|+||.||+|+++.+++.||||++++..    ...+.+..|..++..+ .|+++     +++++++...+.+|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----v~~~~~~~~~~~~~iv~   75 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL-----TQLYCCFQTPDRLFFVM   75 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCch-----hceeeEEEcCCEEEEEE
Confidence            46899999999999999999999999997532    2345566788888766 46555     99999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++                    
T Consensus        76 Ey~~~g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~--------------------  133 (320)
T cd05590          76 EFVNGGDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG--------------------  133 (320)
T ss_pred             cCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--------------------
Confidence            999 999999987654  799999999999999999999999999999999999997665                    


Q ss_pred             cCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  328 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~  328 (438)
                             .++|+|||++....   .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+...
T Consensus       134 -------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~  206 (320)
T cd05590         134 -------HCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFE  206 (320)
T ss_pred             -------cEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHH
Confidence                   46666666654321   12233578999999999998889999999999999999999999998877666554


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+......                                                  .+..++.++.+||.+||+.||+
T Consensus       207 ~i~~~~~~--------------------------------------------------~~~~~~~~~~~li~~~L~~dP~  236 (320)
T cd05590         207 AILNDEVV--------------------------------------------------YPTWLSQDAVDILKAFMTKNPT  236 (320)
T ss_pred             HHhcCCCC--------------------------------------------------CCCCCCHHHHHHHHHHcccCHH
Confidence            44321111                                                  1123467899999999999999


Q ss_pred             CCCCH------HHHhcCCCCCCC
Q 013678          409 ERLKA------REALRHPFFTRD  425 (438)
Q Consensus       409 ~Rpta------~ell~hp~f~~~  425 (438)
                      +|+++      +++++||||+..
T Consensus       237 ~R~~~~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         237 MRLGSLTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             HCCCCCCCCCHHHHHcCCCcCCC
Confidence            99998      999999999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=7.7e-47  Score=367.83  Aligned_cols=255  Identities=24%  Similarity=0.398  Sum_probs=208.4

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      .++|++.+.||+|+||.||+|++..+++.||+|++.+..    .....+.+|+.+++.++|+++     +++++++.+++
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~i-----v~~~~~~~~~~  116 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWI-----VQLHYAFQDDK  116 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCc-----ceEEEEEecCC
Confidence            468999999999999999999999999999999997532    223456789999999988887     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      .+|+||||+ +++|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||++.++              
T Consensus       117 ~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--------------  179 (370)
T cd05596         117 YLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--------------  179 (370)
T ss_pred             EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCC--------------
Confidence            999999999 99999998764   489999999999999999999999999999999999997665              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCC----CCCcchhHHHHHHHHHHHHhCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL----GWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~----~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                   .+||+|||++......    ....+||+.|+|||++.+.    .++.++|||||||++|||++|..|
T Consensus       180 -------------~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~P  246 (370)
T cd05596         180 -------------HLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP  246 (370)
T ss_pred             -------------CEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCC
Confidence                         4666777766543221    1235799999999999764    378999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+.+.......+.....                      ...++                        ....++.++.+
T Consensus       247 f~~~~~~~~~~~i~~~~~----------------------~~~~~------------------------~~~~~s~~~~~  280 (370)
T cd05596         247 FYADSLVGTYSKIMDHKN----------------------SLTFP------------------------DDIEISKQAKD  280 (370)
T ss_pred             cCCCCHHHHHHHHHcCCC----------------------cCCCC------------------------CcCCCCHHHHH
Confidence            988776555444432110                      01111                        11245778999


Q ss_pred             HHHHccccCCCC--CCCHHHHhcCCCCCCCC
Q 013678          398 LLQGLLRYDPAE--RLKAREALRHPFFTRDV  426 (438)
Q Consensus       398 ll~~~L~~dP~~--Rpta~ell~hp~f~~~~  426 (438)
                      ||.+||+.+|.+  |+|++|+++||||++..
T Consensus       281 li~~~L~~~p~r~~R~s~~ell~h~~~~~~~  311 (370)
T cd05596         281 LICAFLTDREVRLGRNGVDEIKSHPFFKNDQ  311 (370)
T ss_pred             HHHHHccChhhccCCCCHHHHhcCcccCCCC
Confidence            999999999988  99999999999998743

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=8.3e-47  Score=360.21  Aligned_cols=244  Identities=26%  Similarity=0.398  Sum_probs=198.0

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +.||+|+||.||+|++..+++.||+|+++...    ........|..++..+ .|+++     +++++++.+.+++|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i-----~~~~~~~~~~~~~~lv~   75 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFL-----THLYCTFQTKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCc-----cCeeEEEEeCCEEEEEE
Confidence            46999999999999999999999999997532    2334556677777654 55555     99999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++.                   
T Consensus        76 E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~-------------------  134 (316)
T cd05620          76 EFLNGGDLMFHIQDKG--RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGH-------------------  134 (316)
T ss_pred             CCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCC-------------------
Confidence            999 999999987754  6899999999999999999999999999999999999976664                   


Q ss_pred             cCCCCCCCeEEecCCCCccc---CCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFE---HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  328 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~  328 (438)
                              ++|+|||++...   ........||..|+|||++.+..++.++|||||||++|+|++|..||.+.+......
T Consensus       135 --------~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~  206 (316)
T cd05620         135 --------IKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFE  206 (316)
T ss_pred             --------EEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                    566666655432   112234578999999999999999999999999999999999999998776655444


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+......                                                  .+..++.++.+||.+||+.||+
T Consensus       207 ~~~~~~~~--------------------------------------------------~~~~~~~~~~~li~~~l~~dP~  236 (316)
T cd05620         207 SIRVDTPH--------------------------------------------------YPRWITKESKDILEKLFERDPT  236 (316)
T ss_pred             HHHhCCCC--------------------------------------------------CCCCCCHHHHHHHHHHccCCHH
Confidence            33221111                                                  1123467899999999999999


Q ss_pred             CCCCH-HHHhcCCCCCCC
Q 013678          409 ERLKA-REALRHPFFTRD  425 (438)
Q Consensus       409 ~Rpta-~ell~hp~f~~~  425 (438)
                      +|+++ +++++||||+..
T Consensus       237 ~R~~~~~~~~~h~~f~~~  254 (316)
T cd05620         237 RRLGVVGNIRGHPFFKTI  254 (316)
T ss_pred             HcCCChHHHHcCCCcCCC
Confidence            99997 589999999874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=4.9e-46  Score=360.58  Aligned_cols=302  Identities=27%  Similarity=0.462  Sum_probs=232.6

Q ss_pred             CceeeecCC---ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCc
Q 013678           80 GHYVFAIGE---NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGT  153 (438)
Q Consensus        80 ~~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~  153 (438)
                      |+|++..|+   .+.++|++.+.||+|+||.||+|.+..+++.||||++.+.   ......+.+|+.+++.++|+|+   
T Consensus         1 ~~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i---   77 (353)
T cd07850           1 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNI---   77 (353)
T ss_pred             CceeecccchhhhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCC---
Confidence            467777777   5679999999999999999999999999999999998642   2334567789999999998887   


Q ss_pred             ceEEecceeccC------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEE
Q 013678          154 RCVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL  227 (438)
Q Consensus       154 ~iv~~~~~~~~~------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli  227 (438)
                        +++++++...      ...|+||||+.++|.+.+..    .+++..+..++.||+.||+|||++||+||||||+||++
T Consensus        78 --v~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~  151 (353)
T cd07850          78 --IGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV  151 (353)
T ss_pred             --cceeeeeccCCCccccCcEEEEEeccCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE
Confidence              9998887543      36899999998899998864    38899999999999999999999999999999999999


Q ss_pred             ecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHH
Q 013678          228 VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVG  305 (438)
Q Consensus       228 ~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  305 (438)
                      +.++                           .++|+|||++.......  ....++..|+|||++.+..++.++||||||
T Consensus       152 ~~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG  204 (353)
T cd07850         152 KSDC---------------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG  204 (353)
T ss_pred             CCCC---------------------------CEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHH
Confidence            7665                           46666666665443322  224678899999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhh
Q 013678          306 CILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  385 (438)
Q Consensus       306 ~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (438)
                      |++|+|++|+.||...+.......+...++.++..+..........+..........       ...........+....
T Consensus       205 ~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~  277 (353)
T cd07850         205 CIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGY-------SFEELFPDVLFPPDSE  277 (353)
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCc-------chhhhCcccccCcccc
Confidence            999999999999999888888888888889888877666554444333222111000       0000000000000011


Q ss_pred             hccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       386 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      ......+..+.+||.+||+.||++|||+.|+|+||||+.
T Consensus       278 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~  316 (353)
T cd07850         278 SHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV  316 (353)
T ss_pred             cccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence            112345678899999999999999999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=9.5e-47  Score=358.25  Aligned_cols=244  Identities=27%  Similarity=0.367  Sum_probs=200.3

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcE-EEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC-eE
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN-HI  168 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~-vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~-~~  168 (438)
                      ..+.+.||+|+||+||+|...  |.. ||+|++....   ...+.+.+|+.+|.+++|+||     |+++|++.... .+
T Consensus        43 l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNI-----V~f~G~~~~~~~~~  115 (362)
T KOG0192|consen   43 LPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNI-----VQFYGACTSPPGSL  115 (362)
T ss_pred             hhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCe-----eeEEEEEcCCCCce
Confidence            355566999999999999875  444 9999997533   225689999999999999988     99999999887 79


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR-LIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|||||+ +|+|.+++.......++...+..++.||++||.|||+++ ||||||||+|||++.++               
T Consensus       116 ~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~---------------  180 (362)
T KOG0192|consen  116 CIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG---------------  180 (362)
T ss_pred             EEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC---------------
Confidence            9999999 999999998844468999999999999999999999999 99999999999996643               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHh--CCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVIL--GLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                 ..+||+|||+++....   ..+...||+.|||||++.  ...|+.|+||||||++||||+||+.||.+.
T Consensus       181 -----------~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~  249 (362)
T KOG0192|consen  181 -----------KTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDL  249 (362)
T ss_pred             -----------CEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCC
Confidence                       2577888888776553   334468999999999999  558999999999999999999999999988


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      ...+....+.. .+..|                                               ..+..+++.+..||.+
T Consensus       250 ~~~~~~~~v~~-~~~Rp-----------------------------------------------~~p~~~~~~l~~l~~~  281 (362)
T KOG0192|consen  250 APVQVASAVVV-GGLRP-----------------------------------------------PIPKECPPHLSSLMER  281 (362)
T ss_pred             CHHHHHHHHHh-cCCCC-----------------------------------------------CCCccCCHHHHHHHHH
Confidence            77444333321 11111                                               1122356789999999


Q ss_pred             ccccCCCCCCCHHHHhc
Q 013678          402 LLRYDPAERLKAREALR  418 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~  418 (438)
                      ||..||.+||++.+++.
T Consensus       282 CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  282 CWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             hCCCCCCcCCCHHHHHH
Confidence            99999999999988763

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=7.1e-46  Score=367.28  Aligned_cols=275  Identities=25%  Similarity=0.331  Sum_probs=202.5

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      ..+|.+.+.||+|+||.||+|.+..+++.||||....     ....+|+.++++|+|+||     +++++++..++..|+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~HpnI-----v~l~~~~~~~~~~~l  237 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLSHPAV-----LALLDVRVVGGLTCL  237 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCCCCCC-----CcEEEEEEECCEEEE
Confidence            4589999999999999999999999999999996432     345689999999999888     999999999999999


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       171 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||++.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||||+.++                   
T Consensus       238 v~e~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~-------------------  297 (461)
T PHA03211        238 VLPKYRSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPE-------------------  297 (461)
T ss_pred             EEEccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCC-------------------
Confidence            99999889999987643 3699999999999999999999999999999999999997655                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC---
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE---  322 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~---  322 (438)
                              .++|+|||++......     .....||..|+|||++.+..++.++|||||||+||||++|..++....   
T Consensus       298 --------~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~  369 (461)
T PHA03211        298 --------DICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGD  369 (461)
T ss_pred             --------CEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCccc
Confidence                    4566666666543221     112469999999999999999999999999999999999876543221   


Q ss_pred             ----hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHH---h---ccchhhhhhccCCch
Q 013678          323 ----NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---L---LRLPNLIMQHVDHSA  392 (438)
Q Consensus       323 ----~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~  392 (438)
                          ...++..+.+..+.....                    ++.....+ .......   .   .......+......+
T Consensus       370 ~~~~~~~~l~~~i~~~~~~~~~--------------------~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (461)
T PHA03211        370 ERRPYDAQILRIIRQAQVHVDE--------------------FPQHAGSR-LVSQYRHRAARNRRPAYTRPAWTRYYKLD  428 (461)
T ss_pred             ccCCcHHHHHHHHHhhcccccc--------------------CCCCcchH-HHHHHHhhhhcccCCccCCcchhhhcccc
Confidence                122333333222111000                    00000000 0000000   0   000000111112345


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       393 ~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      .++.+||.+||++||.+|||+.|+|+||||++
T Consensus       429 ~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        429 LDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             chHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence            68899999999999999999999999999975

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=5.1e-46  Score=352.63  Aligned_cols=286  Identities=28%  Similarity=0.473  Sum_probs=222.7

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ++|++.++||+|+||.||+|.+..+++.||+|.++...  .....+.+|+.+++.++|+||     +++++++...+..|
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-----~~~~~~~~~~~~~~   80 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI-----VTLHDIIHTEKSLT   80 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCc-----ceEEEEEecCCeEE
Confidence            57999999999999999999999999999999986432  234467789999999998887     99999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      +||||+.++|.+++.... ..+++..++.++.||+.||+|||++||+|+||||+||+++.++                  
T Consensus        81 lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~------------------  141 (301)
T cd07873          81 LVFEYLDKDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG------------------  141 (301)
T ss_pred             EEEeccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCC------------------
Confidence            999999889999987653 4689999999999999999999999999999999999997665                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                               .++|+|||++......   .....++..|+|||++.+. .++.++|||||||++|+|++|..||...+..+
T Consensus       142 ---------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~  212 (301)
T cd07873         142 ---------ELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE  212 (301)
T ss_pred             ---------cEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                     4566666665443221   1223568899999998764 47899999999999999999999999888888


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+...++.++...+........ + .   ...++..               ...........+++.+.+||.+||+.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~-~-~---~~~~~~~---------------~~~~~~~~~~~~~~~~~~li~~ml~~  272 (301)
T cd07873         213 QLHFIFRILGTPTEETWPGILSNEE-F-K---SYNYPKY---------------RADCLHNHAPRLDSDGAELLSKLLQF  272 (301)
T ss_pred             HHHHHHHHcCCCChhhchhhhcccc-c-c---ccccCcc---------------ccccHHhhcCCCCHHHHHHHHHHhcC
Confidence            8888887777665543322111000 0 0   0000000               00011122345677899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCCCce
Q 013678          406 DPAERLKAREALRHPFFTRDVRRPT  430 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~~~~~  430 (438)
                      ||.+|||++|+|+||||+.-..+-+
T Consensus       273 dp~~R~t~~eil~h~~f~~~~~~~~  297 (301)
T cd07873         273 EGRKRISAEEAMKHPYFHCLGERIH  297 (301)
T ss_pred             CcccCcCHHHHhcCcccccccchhh
Confidence            9999999999999999988765543

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1e-47  Score=362.79  Aligned_cols=251  Identities=30%  Similarity=0.535  Sum_probs=224.5

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe-
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH-  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~-  167 (438)
                      ++|.+++++|+|+||.+++++++..+..||+|.+..   ....++.+..|+.+++++.||||     |.+.+.|..++. 
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~i-----v~y~ds~~~~~~~   78 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNI-----VEYKDSFEEDGQL   78 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCe-----eeeccchhcCCce
Confidence            578999999999999999999999999999999864   33455678899999999999988     999999998887 


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||+|| ||+|.+.+.+..+..++++.+..++.||+.|+.|||+++|+|||||+.|||++.++               
T Consensus        79 l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~---------------  143 (426)
T KOG0589|consen   79 LCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDK---------------  143 (426)
T ss_pred             EEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccC---------------
Confidence            99999999 99999999987777899999999999999999999999999999999999996554               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                  .|+|+|||+|+......   .+.+||+.||.||++.+.+|+.|+|||||||++|||++-+.+|.+.+.
T Consensus       144 ------------~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m  211 (426)
T KOG0589|consen  144 ------------KVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM  211 (426)
T ss_pred             ------------ceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch
Confidence                        57888888888776554   457999999999999999999999999999999999999999999988


Q ss_pred             HHHHHHHHHHh-CCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          324 LEHLAMMERVL-GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       324 ~~~~~~i~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      .....+|.+.. .++                                                  +..++.+++.||+.|
T Consensus       212 ~~Li~ki~~~~~~Pl--------------------------------------------------p~~ys~el~~lv~~~  241 (426)
T KOG0589|consen  212 SELILKINRGLYSPL--------------------------------------------------PSMYSSELRSLVKSM  241 (426)
T ss_pred             HHHHHHHhhccCCCC--------------------------------------------------CccccHHHHHHHHHH
Confidence            88887776654 222                                                  235677999999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      |..+|..||++.++|.+|.+..
T Consensus       242 l~~~P~~RPsa~~LL~~P~l~~  263 (426)
T KOG0589|consen  242 LRKNPEHRPSALELLRRPHLLR  263 (426)
T ss_pred             hhcCCccCCCHHHHhhChhhhh
Confidence            9999999999999999998874

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=5.5e-47  Score=363.05  Aligned_cols=244  Identities=25%  Similarity=0.426  Sum_probs=201.4

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEc
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e  173 (438)
                      +.||+|+||.||+|.+..+++.||+|++....    .....+.+|+.++..+.|++|     +++++++...+.+|||||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i-----~~~~~~~~~~~~~~lv~E   75 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL-----TALKYSFQTHDRLCFVME   75 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC-----CceEEEEEcCCEEEEEEe
Confidence            46899999999999999999999999997532    233456778999998888877     999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       174 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      |+ +++|.+++....  .+++..++.++.||+.||+|||+ +||+||||||+|||++.+|                    
T Consensus        76 ~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~--------------------  133 (325)
T cd05594          76 YANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--------------------  133 (325)
T ss_pred             CCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCC--------------------
Confidence            99 999999887654  79999999999999999999997 7999999999999997665                    


Q ss_pred             cCCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  328 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~  328 (438)
                             .+||+|||++.....   ......||..|+|||++.+..++.++|||||||++|+|++|..||.+.+......
T Consensus       134 -------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~  206 (325)
T cd05594         134 -------HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE  206 (325)
T ss_pred             -------CEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHH
Confidence                   466777776653211   1223579999999999999899999999999999999999999998766554443


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+.....                                                  ..+..+++++.+||.+||+.||+
T Consensus       207 ~i~~~~~--------------------------------------------------~~p~~~~~~~~~li~~~L~~dP~  236 (325)
T cd05594         207 LILMEEI--------------------------------------------------RFPRTLSPEAKSLLSGLLKKDPK  236 (325)
T ss_pred             HHhcCCC--------------------------------------------------CCCCCCCHHHHHHHHHHhhcCHH
Confidence            3321110                                                  11224567899999999999999


Q ss_pred             CCC-----CHHHHhcCCCCCCC
Q 013678          409 ERL-----KAREALRHPFFTRD  425 (438)
Q Consensus       409 ~Rp-----ta~ell~hp~f~~~  425 (438)
                      +|+     ++.++++||||.+.
T Consensus       237 ~R~~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         237 QRLGGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             HhCCCCCCCHHHHhcCCCcCCC
Confidence            997     99999999999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=7.1e-47  Score=363.14  Aligned_cols=253  Identities=27%  Similarity=0.420  Sum_probs=206.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++.+.||+|+||.||+|.+..+++.||+|+++....    ....+.+|+.++..+.|+++     +++++++.+.+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i-----~~~~~~~~~~~~   75 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWI-----PQLQYAFQDKDN   75 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC-----cceeeEEecCCe
Confidence            468999999999999999999999999999999975332    44567789999998888877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|               
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~---------------  139 (330)
T cd05601          76 LYLVMEYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTG---------------  139 (330)
T ss_pred             EEEEECCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCC---------------
Confidence            99999999 999999998753 3699999999999999999999999999999999999997665               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHh------CCCCCcchhHHHHHHHHHHHHhCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVIL------GLGWNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~------~~~~~~~~DiwSlG~il~elltg~~  316 (438)
                                  .+||+|||++.......    ....||+.|+|||++.      +..++.++|||||||++|+|++|..
T Consensus       140 ------------~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~  207 (330)
T cd05601         140 ------------HIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRS  207 (330)
T ss_pred             ------------CEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCC
Confidence                        46666676665433221    1246899999999987      4457899999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||...+....+..+.....                      ...++                        ....++.++.
T Consensus       208 Pf~~~~~~~~~~~i~~~~~----------------------~~~~~------------------------~~~~~~~~~~  241 (330)
T cd05601         208 PFHEGTSAKTYNNIMNFQR----------------------FLKFP------------------------EDPKVSSDFL  241 (330)
T ss_pred             CCCCCCHHHHHHHHHcCCC----------------------ccCCC------------------------CCCCCCHHHH
Confidence            9987766555444332100                      00011                        1124567899


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      +||.+||. ||.+|||++++++||||+.
T Consensus       242 ~li~~ll~-~p~~R~t~~~l~~h~~~~~  268 (330)
T cd05601         242 DLIQSLLC-GQKERLGYEGLCCHPFFSK  268 (330)
T ss_pred             HHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence            99999998 9999999999999999986

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.5e-46  Score=365.52  Aligned_cols=255  Identities=24%  Similarity=0.398  Sum_probs=207.2

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ..++|++.+.||+|+||.||+|++..+++.||+|++.+..    .....+.+|+.+++.++|+++     +++++++.++
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~i-----v~~~~~~~~~  115 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV-----VQLFCAFQDD  115 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCE-----eeEEEEEEcC
Confidence            3578999999999999999999999999999999986522    233456789999999988877     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+|+||||| +++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++             
T Consensus       116 ~~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~-------------  179 (370)
T cd05621         116 KYLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG-------------  179 (370)
T ss_pred             CEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC-------------
Confidence            9999999999 99999999754   489999999999999999999999999999999999997655             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCCC----CCcchhHHHHHHHHHHHHhCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~il~elltg~~  316 (438)
                                    .+||+|||++......    ....+||+.|+|||++.+..    ++.++|||||||++|+|++|..
T Consensus       180 --------------~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~  245 (370)
T cd05621         180 --------------HLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDT  245 (370)
T ss_pred             --------------CEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCC
Confidence                          5677777776554322    12457999999999998643    7889999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||.+.+.......+.....                      ...++.                        ...++..++
T Consensus       246 Pf~~~~~~~~~~~i~~~~~----------------------~~~~p~------------------------~~~~s~~~~  279 (370)
T cd05621         246 PFYADSLVGTYSKIMDHKN----------------------SLNFPE------------------------DVEISKHAK  279 (370)
T ss_pred             CCCCCCHHHHHHHHHhCCc----------------------ccCCCC------------------------cccCCHHHH
Confidence            9988776555544432111                      011111                        123467899


Q ss_pred             HHHHHccccCCCC--CCCHHHHhcCCCCCCC
Q 013678          397 DLLQGLLRYDPAE--RLKAREALRHPFFTRD  425 (438)
Q Consensus       397 ~ll~~~L~~dP~~--Rpta~ell~hp~f~~~  425 (438)
                      ++|.+||..++.+  |+|+.|+++||||+..
T Consensus       280 ~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         280 NLICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             HHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence            9999999865544  8899999999999874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=3.3e-46  Score=356.56  Aligned_cols=283  Identities=25%  Similarity=0.464  Sum_probs=206.0

Q ss_pred             EeeeeeecceEEEEEEEC--CCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc--CCeEEEEE
Q 013678           97 LSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RNHICIVF  172 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--~~~~~lv~  172 (438)
                      .++||+|+||.||+|+++  .+++.||+|.+.... ......+|+.+++.++|+|+     +++++++..  +..+|+||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~~~lv~   79 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELKHPNV-----ISLQKVFLSHADRKVWLLF   79 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhcCCCCC-----cceeeeEecCCCcEEEEEE
Confidence            368999999999999965  467889999986532 23457789999999999888     999998853  56799999


Q ss_pred             ccCCCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          173 EKLGPSLYDFLRKNS-------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       173 e~~~~~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ||++++|.+++....       ...+++..++.++.||+.||+|||++||+||||||+|||+...+              
T Consensus        80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~--------------  145 (317)
T cd07868          80 DYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG--------------  145 (317)
T ss_pred             eccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCC--------------
Confidence            999889999886421       13589999999999999999999999999999999999995432              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCC------CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                               +....+||+|||++......      .....||+.|+|||++.+. .++.++|||||||++|+|++|+.||
T Consensus       146 ---------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f  216 (317)
T cd07868         146 ---------PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF  216 (317)
T ss_pred             ---------CCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCc
Confidence                     23446888888888654322      1235789999999999875 5899999999999999999999999


Q ss_pred             CCCCh---------HHHHHHHHHHhCCCChHHHHHHhhhhhh--hhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhc
Q 013678          319 QTHEN---------LEHLAMMERVLGPLPHHMVIRADRRAEK--YFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH  387 (438)
Q Consensus       319 ~~~~~---------~~~~~~i~~~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (438)
                      .....         ..++..+...+|.++...+.........  .........+.              ...........
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~  282 (317)
T cd07868         217 HCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYT--------------NCSLIKYMEKH  282 (317)
T ss_pred             cCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccC--------------cccccchHHhc
Confidence            75432         3456666677776655443322110000  00000000000              00000001111


Q ss_pred             cCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q 013678          388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       388 ~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      ....+.++.+||.+||++||.+|||++|+|+||||
T Consensus       283 ~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         283 KVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             CCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            12235578999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=1.4e-47  Score=337.92  Aligned_cols=289  Identities=29%  Similarity=0.512  Sum_probs=228.6

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCC----cEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKK----ELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      ..|+++++||+|.||.||+|....++    +.+|||.++...   .....+.+|+.+++.|+|+|+     +.+..+|-.
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nv-----i~Lv~Vfl~   98 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNV-----ISLVKVFLS   98 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcc-----hhHHHHHhc
Confidence            56899999999999999999665543    378999987542   344678899999999999988     999998876


Q ss_pred             -CCeEEEEEccCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          165 -RNHICIVFEKLGPSLYDFLRKNS---YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       165 -~~~~~lv~e~~~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                       +..+++++||...+|.+.|+-+.   .+.++...++.|+.||+.|+.|||++-|+||||||+|||+..+|         
T Consensus        99 ~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdg---------  169 (438)
T KOG0666|consen   99 HDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDG---------  169 (438)
T ss_pred             cCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccC---------
Confidence             78999999999999999997432   24689999999999999999999999999999999999998876         


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHh
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCS  313 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~ellt  313 (438)
                                    ...+++||+|||+++.....-      ..++-|.+|+|||++.|.. |+.+.||||+|||+.||+|
T Consensus       170 --------------perG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLt  235 (438)
T KOG0666|consen  170 --------------PERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLT  235 (438)
T ss_pred             --------------CccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHc
Confidence                          457789999999998765542      2357799999999999975 9999999999999999999


Q ss_pred             CCCCCCCCC---------hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhc------
Q 013678          314 GEALFQTHE---------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL------  378 (438)
Q Consensus       314 g~~pf~~~~---------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  378 (438)
                      -++.|.+..         ..+++..|.+++|.+..                   ..||+...-++....+....      
T Consensus       236 l~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~-------------------~~Wp~lkk~Pe~q~~ls~f~~~~~~n  296 (438)
T KOG0666|consen  236 LEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTD-------------------KDWPDLKKMPEYQTLLSDFRRHYYDN  296 (438)
T ss_pred             cCccccchhhhcccCCCchHHHHHHHHHHcCCCcc-------------------ccchhhhhCcchHHHHHHhHHhhcCc
Confidence            999997643         24678888888887764                   34554443333211111110      


Q ss_pred             -cchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          379 -RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       379 -~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                       .+.+. ......-++...+||.+||++||.+|+|++++|+|+||++....
T Consensus       297 ~sL~~~-~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp  346 (438)
T KOG0666|consen  297 VSLHKY-YHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP  346 (438)
T ss_pred             chHHHH-HHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence             01111 11122335568999999999999999999999999999987433

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1.1e-46  Score=360.24  Aligned_cols=244  Identities=22%  Similarity=0.353  Sum_probs=200.9

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +.||+|+||.||+|++..+++.||||++++..    ...+.+..|..++..+ .|+++     +++++++.+++.+|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i-----~~~~~~~~~~~~~~lv~   75 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFL-----TALHCCFQTKDRLFFVM   75 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCc-----cceeeEEEcCCeEEEEE
Confidence            46899999999999999999999999997532    2334566788888765 45555     99999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++                    
T Consensus        76 E~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~--------------------  133 (321)
T cd05591          76 EYVNGGDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG--------------------  133 (321)
T ss_pred             eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--------------------
Confidence            999 999999987654  799999999999999999999999999999999999997665                    


Q ss_pred             cCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  328 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~  328 (438)
                             .++|+|||++....   .......||..|+|||++.+..++.++|||||||++|+|++|+.||...+..+...
T Consensus       134 -------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~  206 (321)
T cd05591         134 -------HCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFE  206 (321)
T ss_pred             -------CEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHH
Confidence                   46667777665321   11233578999999999999899999999999999999999999998877766555


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+......                                                  .+...+.++.+||.+||+.||+
T Consensus       207 ~i~~~~~~--------------------------------------------------~p~~~~~~~~~ll~~~L~~dp~  236 (321)
T cd05591         207 SILHDDVL--------------------------------------------------YPVWLSKEAVSILKAFMTKNPN  236 (321)
T ss_pred             HHHcCCCC--------------------------------------------------CCCCCCHHHHHHHHHHhccCHH
Confidence            44321111                                                  1123466899999999999999


Q ss_pred             CCC-------CHHHHhcCCCCCCC
Q 013678          409 ERL-------KAREALRHPFFTRD  425 (438)
Q Consensus       409 ~Rp-------ta~ell~hp~f~~~  425 (438)
                      +|+       +++++++||||...
T Consensus       237 ~R~~~~~~~~~~~~~~~hp~~~~~  260 (321)
T cd05591         237 KRLGCVASQGGEDAIKQHPFFKEI  260 (321)
T ss_pred             HcCCCCCCCCCHHHHhcCCccCCC
Confidence            999       99999999999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-46  Score=351.45  Aligned_cols=255  Identities=24%  Similarity=0.376  Sum_probs=207.9

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      +|++.+.||+|+||.||++.+..+++.||+|++....    .....+.+|+.+++.++|+++     +++++.+..++++
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~   75 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFV-----VSLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCE-----eeeeeeecCCCeE
Confidence            4889999999999999999999999999999986532    123456789999999988877     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |+||||+ +++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++                
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~----------------  139 (285)
T cd05605          76 CLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYG----------------  139 (285)
T ss_pred             EEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCC----------------
Confidence            9999999 99999988765445799999999999999999999999999999999999997655                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                 .++|+|||++.......  ....|+..|+|||++.+..++.++||||+||++|+|++|..||.+.+...
T Consensus       140 -----------~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~  208 (285)
T cd05605         140 -----------HIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV  208 (285)
T ss_pred             -----------CEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh
Confidence                       46677777665533221  23478999999999998889999999999999999999999998765543


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+.......+                                              ......++..+.+||.+||+.
T Consensus       209 ~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~~l~~  242 (285)
T cd05605         209 KREEVERRVKEDQ----------------------------------------------EEYSEKFSEAARSICRQLLTK  242 (285)
T ss_pred             HHHHHHHHhhhcc----------------------------------------------cccCcccCHHHHHHHHHHccC
Confidence            3333322110000                                              011234567899999999999


Q ss_pred             CCCCCC-----CHHHHhcCCCCCCC
Q 013678          406 DPAERL-----KAREALRHPFFTRD  425 (438)
Q Consensus       406 dP~~Rp-----ta~ell~hp~f~~~  425 (438)
                      ||++||     +++++++||||...
T Consensus       243 ~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05605         243 DPGFRLGCRGEGAEEVKAHPFFRTA  267 (285)
T ss_pred             CHHHhcCCCCCCHHHHhcCcCccCC
Confidence            999999     99999999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=4.4e-46  Score=356.45  Aligned_cols=250  Identities=25%  Similarity=0.366  Sum_probs=204.9

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      +|++.+.||+|+||.||+|++..+++.||||++++..    ...+....|..++..+.|+    ++++++++++.+.+.+
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~----~~i~~~~~~~~~~~~~   76 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKP----PFLTQLHSCFQTMDRL   76 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC----CeEeeEEEEEecCCEE
Confidence            4789999999999999999999999999999987532    2233456677777766533    4558999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |+||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++                
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~----------------  138 (323)
T cd05616          77 YFVMEYVNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG----------------  138 (323)
T ss_pred             EEEEcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCC----------------
Confidence            9999999 999999987654  699999999999999999999999999999999999997665                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                 .+||+|||++....   .......||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..
T Consensus       139 -----------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~  207 (323)
T cd05616         139 -----------HIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED  207 (323)
T ss_pred             -----------cEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH
Confidence                       46666666665322   1223357899999999999999999999999999999999999999887776


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      .....+......+                                                  +...+.++.+||.+||+
T Consensus       208 ~~~~~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~~l~  237 (323)
T cd05616         208 ELFQSIMEHNVAY--------------------------------------------------PKSMSKEAVAICKGLMT  237 (323)
T ss_pred             HHHHHHHhCCCCC--------------------------------------------------CCcCCHHHHHHHHHHcc
Confidence            6655544321111                                                  12356789999999999


Q ss_pred             cCCCCCCC-----HHHHhcCCCCCCC
Q 013678          405 YDPAERLK-----AREALRHPFFTRD  425 (438)
Q Consensus       405 ~dP~~Rpt-----a~ell~hp~f~~~  425 (438)
                      .||++|++     ..++++||||+..
T Consensus       238 ~~p~~R~~~~~~~~~~i~~h~~~~~~  263 (323)
T cd05616         238 KHPGKRLGCGPEGERDIKEHAFFRYI  263 (323)
T ss_pred             cCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence            99999997     4899999999753

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=1.5e-46  Score=365.01  Aligned_cols=279  Identities=24%  Similarity=0.342  Sum_probs=212.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      +.|++++.||+|+||.||+|.+..+++.||||+++...    .....+.+|+.++..++|+++     +++++.+.+.++
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----v~~~~~~~~~~~   75 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWV-----VKMFYSFQDKRN   75 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCE-----eeEEEEEEcCCE
Confidence            36899999999999999999999999999999997532    234566789999999888776     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||||+ +++|.+++.+..  .+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++.....
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~  153 (360)
T cd05627          76 LYLIMEFLPGGDMMTLLMKKD--TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK  153 (360)
T ss_pred             EEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence            99999999 999999998654  699999999999999999999999999999999999999999999999988764322


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcc------------cCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTF------------EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg  314 (438)
                      ........ ......-.++.....            ........+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus       154 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG  232 (360)
T cd05627         154 AHRTEFYR-NLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG  232 (360)
T ss_pred             cccccccc-ccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccC
Confidence            11000000 000000001110000            00011235799999999999999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      ..||.+.+.......+.....                      ...+|                        .....+.+
T Consensus       233 ~~Pf~~~~~~~~~~~i~~~~~----------------------~~~~p------------------------~~~~~s~~  266 (360)
T cd05627         233 YPPFCSETPQETYRKVMNWKE----------------------TLVFP------------------------PEVPISEK  266 (360)
T ss_pred             CCCCCCCCHHHHHHHHHcCCC----------------------ceecC------------------------CCCCCCHH
Confidence            999988766555444332100                      00000                        01135678


Q ss_pred             HHHHHHHccccCCCCCC---CHHHHhcCCCCCCC
Q 013678          395 LIDLLQGLLRYDPAERL---KAREALRHPFFTRD  425 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rp---ta~ell~hp~f~~~  425 (438)
                      +.+||.+|+. ||.+|+   +++|+++||||++.
T Consensus       267 ~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         267 AKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             HHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence            9999999874 999999   48999999999874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=3.5e-46  Score=358.42  Aligned_cols=300  Identities=22%  Similarity=0.308  Sum_probs=213.4

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ..++|++.++||+|+||.||+|.+..++..+|+|++...  ......+.+|+++++.++|+||     +++++++..+++
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~   77 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI-----VGFYGAFYSDGE   77 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcc-----cceeEEEEECCE
Confidence            347899999999999999999999999999999998753  2344678899999999998887     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      +|+||||+ +++|.+++....  .+++..+..++.|++.||.|||++ +|+||||||+|||++.++              
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~--------------  141 (333)
T cd06650          78 ISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--------------  141 (333)
T ss_pred             EEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC--------------
Confidence            99999999 999999998754  689999999999999999999975 799999999999997655              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCC-CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                   .+||+|||++..... ......||..|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus       142 -------------~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~  208 (333)
T cd06650         142 -------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK  208 (333)
T ss_pred             -------------CEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh
Confidence                         467777776654322 223357899999999999888999999999999999999999999865543


Q ss_pred             HHHHHHHHH-hCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          325 EHLAMMERV-LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       325 ~~~~~i~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      +....+... .+..+...........     ......+..............................+.++.+||.+||
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  283 (333)
T cd06650         209 ELELMFGCPVEGDPAESETSPRPRPP-----GRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCL  283 (333)
T ss_pred             HHHHHhcCcccCCccccccCcccCCc-----cchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhc
Confidence            332221110 1111000000000000     0000000000000000000000000000000001235678999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          404 RYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      ++||++|||+.|+++||||+....+
T Consensus       284 ~~~P~~Rpt~~ell~h~~~~~~~~~  308 (333)
T cd06650         284 IKNPAERADLKQLMVHAFIKRSEAE  308 (333)
T ss_pred             cCCcccCcCHHHHhhCHHHhcCccc
Confidence            9999999999999999999876543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=3.3e-46  Score=355.96  Aligned_cols=244  Identities=25%  Similarity=0.393  Sum_probs=198.3

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +.||+|+||.||+|++..+++.||||+++...    ........|..++..+ .|+++     +++++++.+.+.+|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i-----v~~~~~~~~~~~~~lv~   75 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL-----THLYCTFQTKENLFFVM   75 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcC-----cceEEEEEeCCEEEEEE
Confidence            46999999999999999999999999997532    2334556677777654 66665     99999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++                    
T Consensus        76 ey~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~--------------------  133 (316)
T cd05619          76 EYLNGGDLMFHIQSCH--KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDG--------------------  133 (316)
T ss_pred             eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--------------------
Confidence            999 999999998653  689999999999999999999999999999999999997665                    


Q ss_pred             cCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  328 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~  328 (438)
                             .++|+|||++....   .......||..|+|||++.+..++.++|||||||++|+|++|..||.+.+..+...
T Consensus       134 -------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~  206 (316)
T cd05619         134 -------HIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQ  206 (316)
T ss_pred             -------CEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                   46666666654321   12233578999999999999899999999999999999999999998776655444


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+......                                                  .+..++.++.+||.+||+.||+
T Consensus       207 ~i~~~~~~--------------------------------------------------~~~~~~~~~~~li~~~l~~~P~  236 (316)
T cd05619         207 SIRMDNPC--------------------------------------------------YPRWLTREAKDILVKLFVREPE  236 (316)
T ss_pred             HHHhCCCC--------------------------------------------------CCccCCHHHHHHHHHHhccCHh
Confidence            33221100                                                  1123456889999999999999


Q ss_pred             CCCCHH-HHhcCCCCCCC
Q 013678          409 ERLKAR-EALRHPFFTRD  425 (438)
Q Consensus       409 ~Rpta~-ell~hp~f~~~  425 (438)
                      +|+++. ++++||||++.
T Consensus       237 ~R~~~~~~l~~h~~~~~~  254 (316)
T cd05619         237 RRLGVKGDIRQHPFFREI  254 (316)
T ss_pred             hcCCChHHHHcCcccCCC
Confidence            999996 89999999874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=2.1e-46  Score=360.25  Aligned_cols=253  Identities=27%  Similarity=0.418  Sum_probs=199.4

Q ss_pred             ceEEEeeeeeecceEEEEEEEC---CCCcEEEEEEeecch-----hhHHHHHHHHHHHHHHH-hcCCCCcceEEecceec
Q 013678           93 RCKILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~  163 (438)
                      +|+++++||+|+||.||++++.   .+++.||+|++.+..     ...+.+..|+.++..+. |+++     +++++++.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i-----~~~~~~~~   75 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFL-----VTLHYAFQ   75 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCc-----ccEEEEEe
Confidence            4899999999999999999864   478999999987532     23345678999999885 5555     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      .++.+++||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++           
T Consensus        76 ~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~-----------  142 (332)
T cd05614          76 TEAKLHLILDYVSGGEMFTHLYQRD--NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG-----------  142 (332)
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC-----------
Confidence            999999999999 999999997654  699999999999999999999999999999999999997665           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHhCCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~p  317 (438)
                                      .+||+|||++......    .....||..|+|||++.+.. ++.++|||||||++|||++|..|
T Consensus       143 ----------------~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~p  206 (332)
T cd05614         143 ----------------HVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASP  206 (332)
T ss_pred             ----------------CEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCC
Confidence                            4667777766542211    12357999999999998754 78999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |...........+.....                                              .........++..+.+
T Consensus       207 f~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~~~  240 (332)
T cd05614         207 FTLEGERNTQSEVSRRIL----------------------------------------------KCDPPFPSFIGPEAQD  240 (332)
T ss_pred             CCCCCCCCCHHHHHHHHh----------------------------------------------cCCCCCCCCCCHHHHH
Confidence            965332111111111000                                              0001112345778999


Q ss_pred             HHHHccccCCCCCC-----CHHHHhcCCCCCCC
Q 013678          398 LLQGLLRYDPAERL-----KAREALRHPFFTRD  425 (438)
Q Consensus       398 ll~~~L~~dP~~Rp-----ta~ell~hp~f~~~  425 (438)
                      ||.+||+.||++|+     +++++++||||++.
T Consensus       241 li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         241 LLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             HHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            99999999999999     88999999999874

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=3.9e-46  Score=355.60  Aligned_cols=244  Identities=27%  Similarity=0.390  Sum_probs=197.8

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +.||+|+||.||+|++..+++.||||+++...    ...+....|..++..+ .|++|     +++++++..++.+|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i-----~~~~~~~~~~~~~~lv~   75 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFL-----THLFCTFQTKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCc-----cceeeEEEcCCEEEEEE
Confidence            46999999999999999999999999997532    2233445566666543 45555     99999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++                    
T Consensus        76 e~~~gg~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~--------------------  133 (316)
T cd05592          76 EYLNGGDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG--------------------  133 (316)
T ss_pred             cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC--------------------
Confidence            999 999999997654  799999999999999999999999999999999999997655                    


Q ss_pred             cCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  328 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~  328 (438)
                             .+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+...
T Consensus       134 -------~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~  206 (316)
T cd05592         134 -------HIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFD  206 (316)
T ss_pred             -------CEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                   46777777665422   12233579999999999999899999999999999999999999998877665554


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+......                                                  .+..++.++.+||.+||+.||+
T Consensus       207 ~i~~~~~~--------------------------------------------------~~~~~~~~~~~ll~~~l~~~P~  236 (316)
T cd05592         207 SILNDRPH--------------------------------------------------FPRWISKEAKDCLSKLFERDPT  236 (316)
T ss_pred             HHHcCCCC--------------------------------------------------CCCCCCHHHHHHHHHHccCCHH
Confidence            44321111                                                  1123466889999999999999


Q ss_pred             CCCCH-HHHhcCCCCCCC
Q 013678          409 ERLKA-REALRHPFFTRD  425 (438)
Q Consensus       409 ~Rpta-~ell~hp~f~~~  425 (438)
                      +|+++ .++++||||...
T Consensus       237 ~R~~~~~~l~~h~~~~~~  254 (316)
T cd05592         237 KRLGVDGDIRQHPFFRGI  254 (316)
T ss_pred             HcCCChHHHHcCcccCCC
Confidence            99986 589999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=5.4e-47  Score=309.67  Aligned_cols=280  Identities=31%  Similarity=0.504  Sum_probs=225.6

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +|.-.++||+|.||+||+|++..+++.||+|.++..+   .......+|+-+|+.+.|.||     |+++++...++.+.
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhkni-----vrl~dvlhsdkklt   77 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI-----VRLHDVLHSDKKLT   77 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcce-----eehhhhhccCceeE
Confidence            5667889999999999999999999999999997533   345678999999999999988     99999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      +|+|||..+|..+...-. +.++.+.++.++.|+++||.|+|++++.||||||.|.||+.+|.                 
T Consensus        78 lvfe~cdqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~nge-----------------  139 (292)
T KOG0662|consen   78 LVFEFCDQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGE-----------------  139 (292)
T ss_pred             EeHHHhhHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCc-----------------
Confidence            999999999999998754 57999999999999999999999999999999999999987774                 


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCS-GEALFQTHENL  324 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~ellt-g~~pf~~~~~~  324 (438)
                                +|++|||+++..+-+.   +..+-|.+|++|.++.+.. |+...|+||.|||+.|+.. |++.|.+.+-.
T Consensus       140 ----------lkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvd  209 (292)
T KOG0662|consen  140 ----------LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD  209 (292)
T ss_pred             ----------EEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHH
Confidence                      5666666665544332   2246799999999999876 8999999999999999985 89999999999


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +++..|.+.+|.+.+..                   ||.-...++....  ........-.+..+..+..-+||++++|.
T Consensus       210 dqlkrif~~lg~p~ed~-------------------wps~t~lpdyk~y--p~ypattswsqivp~lns~grdllqkll~  268 (292)
T KOG0662|consen  210 DQLKRIFRLLGTPTEDQ-------------------WPSMTKLPDYKPY--PIYPATTSWSQIVPKLNSTGRDLLQKLLK  268 (292)
T ss_pred             HHHHHHHHHhCCCcccc-------------------CCccccCCCCccc--CCccccchHHHHhhhhcchhHHHHHHHhc
Confidence            99999999999887543                   3332211110000  00000000112223445567899999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      -+|.+|++|+++++||||.+..
T Consensus       269 cnp~qrisaeaalqhpyf~d~s  290 (292)
T KOG0662|consen  269 CNPAQRISAEAALQHPYFSDFS  290 (292)
T ss_pred             cCcccccCHHHHhcCccccccC
Confidence            9999999999999999998753

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=3.2e-46  Score=356.61  Aligned_cols=244  Identities=25%  Similarity=0.383  Sum_probs=200.1

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +.||+|+||.||+|.+..+++.||||++++..    .......+|+.++..+ .|+++     +++++++.+.+++|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i-----~~~~~~~~~~~~~~lv~   75 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFL-----TQLHSCFQTKDRLFFVM   75 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCc-----cceeeEEEcCCEEEEEE
Confidence            46999999999999999999999999997532    2334566788888877 45555     99999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++                    
T Consensus        76 e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~--------------------  133 (318)
T cd05570          76 EYVNGGDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEG--------------------  133 (318)
T ss_pred             cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCC--------------------
Confidence            999 999999987764  699999999999999999999999999999999999997666                    


Q ss_pred             cCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  328 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~  328 (438)
                             .++|+|||++....   ......+||..|+|||++.+..++.++|||||||++|+|++|..||.+.+......
T Consensus       134 -------~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~  206 (318)
T cd05570         134 -------HIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQ  206 (318)
T ss_pred             -------cEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHH
Confidence                   45666666654321   11223478999999999999999999999999999999999999998776555444


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+.....                                                  ..+..++..+.+||++||+.||+
T Consensus       207 ~i~~~~~--------------------------------------------------~~~~~~~~~~~~li~~~l~~dP~  236 (318)
T cd05570         207 SILEDEV--------------------------------------------------RYPRWLSKEAKSILKSFLTKNPE  236 (318)
T ss_pred             HHHcCCC--------------------------------------------------CCCCcCCHHHHHHHHHHccCCHH
Confidence            3322100                                                  01123467899999999999999


Q ss_pred             CCCCH-----HHHhcCCCCCCC
Q 013678          409 ERLKA-----REALRHPFFTRD  425 (438)
Q Consensus       409 ~Rpta-----~ell~hp~f~~~  425 (438)
                      +|||+     .++++||||+..
T Consensus       237 ~R~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         237 KRLGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             HcCCCCCCCHHHHhcCCCcCCC
Confidence            99999     999999999874

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=3.1e-46  Score=357.47  Aligned_cols=245  Identities=25%  Similarity=0.409  Sum_probs=201.4

Q ss_pred             EeeeeeecceEEEEEEEC---CCCcEEEEEEeecch-----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           97 LSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ++.||+|+||.||+|++.   .+++.||+|+++...     .....+.+|+.+++.++|+||     +++++++..++.+
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i-----v~~~~~~~~~~~~   75 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFI-----VDLIYAFQTGGKL   75 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCch-----hceeeEEecCCeE
Confidence            367999999999999864   478899999997532     223456789999999998887     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|                
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~----------------  137 (323)
T cd05584          76 YLILEYLSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQG----------------  137 (323)
T ss_pred             EEEEeCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC----------------
Confidence            9999999 999999998764  688999999999999999999999999999999999997665                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                 .+||+|||++.....   ......||+.|+|||++.+..++.++|||||||++|||++|..||...+..
T Consensus       138 -----------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~  206 (323)
T cd05584         138 -----------HVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK  206 (323)
T ss_pred             -----------CEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH
Confidence                       466666666543211   122357899999999999988999999999999999999999999877665


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      .....+.....                                                  ..+...++++.+||.+||+
T Consensus       207 ~~~~~~~~~~~--------------------------------------------------~~~~~~~~~~~~li~~~l~  236 (323)
T cd05584         207 KTIDKILKGKL--------------------------------------------------NLPPYLTPEARDLLKKLLK  236 (323)
T ss_pred             HHHHHHHcCCC--------------------------------------------------CCCCCCCHHHHHHHHHHcc
Confidence            54444332111                                                  1123456789999999999


Q ss_pred             cCCCCCC-----CHHHHhcCCCCCCC
Q 013678          405 YDPAERL-----KAREALRHPFFTRD  425 (438)
Q Consensus       405 ~dP~~Rp-----ta~ell~hp~f~~~  425 (438)
                      .||++|+     +++++++||||+..
T Consensus       237 ~~p~~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         237 RNPSSRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             cCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence            9999999     89999999999764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=7.4e-46  Score=354.77  Aligned_cols=250  Identities=25%  Similarity=0.368  Sum_probs=205.3

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      +|++.+.||+|+||.||+|++..+++.||+|++.+..    ...+.+..|..++..+.|++    +++++++++.+.+.+
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~----~i~~~~~~~~~~~~~   76 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPP----FLTQLHSCFQTVDRL   76 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCC----chhheeeEEecCCEE
Confidence            3788999999999999999999999999999997532    22345667888888876653    347899999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++                
T Consensus        77 ~lv~Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~----------------  138 (323)
T cd05615          77 YFVMEYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG----------------  138 (323)
T ss_pred             EEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC----------------
Confidence            9999999 999999997754  699999999999999999999999999999999999997665                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                 .++|+|||++.....   ......||..|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus       139 -----------~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~  207 (323)
T cd05615         139 -----------HIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED  207 (323)
T ss_pred             -----------CEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH
Confidence                       466677776654221   122356899999999999988999999999999999999999999887766


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      .....+......                                                  .+...+.++.+|+.+||+
T Consensus       208 ~~~~~i~~~~~~--------------------------------------------------~p~~~~~~~~~li~~~l~  237 (323)
T cd05615         208 ELFQSIMEHNVS--------------------------------------------------YPKSLSKEAVSICKGLMT  237 (323)
T ss_pred             HHHHHHHhCCCC--------------------------------------------------CCccCCHHHHHHHHHHcc
Confidence            555544332111                                                  112346688999999999


Q ss_pred             cCCCCCCC-----HHHHhcCCCCCCC
Q 013678          405 YDPAERLK-----AREALRHPFFTRD  425 (438)
Q Consensus       405 ~dP~~Rpt-----a~ell~hp~f~~~  425 (438)
                      .||.+|++     .+++++||||+..
T Consensus       238 ~~p~~R~~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         238 KHPSKRLGCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             cCHhhCCCCCCCCHHHHhcCcccCCC
Confidence            99999997     5799999999874

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=6e-46  Score=356.33  Aligned_cols=247  Identities=23%  Similarity=0.402  Sum_probs=195.7

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +.||+|+||.||+|++..+++.||+|++++..    .....+.+|..++..+ +|++|     +++++++.+.+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~I-----v~~~~~~~~~~~~~lv~   75 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFL-----VGLHSCFQTESRLFFVI   75 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCC-----CceEEEEEcCCEEEEEE
Confidence            46899999999999999999999999997532    2334567889998888 46666     99999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++                    
T Consensus        76 e~~~~g~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~--------------------  133 (329)
T cd05588          76 EFVSGGDLMFHMQRQR--KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEG--------------------  133 (329)
T ss_pred             eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--------------------
Confidence            999 999999987654  799999999999999999999999999999999999997665                    


Q ss_pred             cCCCCCCCeEEecCCCCccc---CCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH---
Q 013678          252 KNLPKSSAIKLIDFGSTTFE---HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE---  325 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~---  325 (438)
                             .+||+|||++...   ........||..|+|||++.+..++.++|||||||++|+|++|+.||......+   
T Consensus       134 -------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~  206 (329)
T cd05588         134 -------HIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPD  206 (329)
T ss_pred             -------CEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccccccccc
Confidence                   4566666665431   112233579999999999999999999999999999999999999996321100   


Q ss_pred             --HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          326 --HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       326 --~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                        ....+.+.                                        ..      ......+..++.++.+||.+||
T Consensus       207 ~~~~~~~~~~----------------------------------------~~------~~~~~~p~~~~~~~~~li~~~L  240 (329)
T cd05588         207 QNTEDYLFQV----------------------------------------IL------EKQIRIPRSLSVKASSVLKGFL  240 (329)
T ss_pred             ccchHHHHHH----------------------------------------HH------cCCCCCCCCCCHHHHHHHHHHh
Confidence              00000000                                        00      0001122345778999999999


Q ss_pred             ccCCCCCCC------HHHHhcCCCCCC
Q 013678          404 RYDPAERLK------AREALRHPFFTR  424 (438)
Q Consensus       404 ~~dP~~Rpt------a~ell~hp~f~~  424 (438)
                      +.||.+|+|      ++++++||||..
T Consensus       241 ~~dP~~R~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         241 NKDPKERLGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             ccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            999999997      789999999975

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=7.1e-46  Score=364.00  Aligned_cols=286  Identities=23%  Similarity=0.389  Sum_probs=214.8

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEEC--CCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      ...+..+|+++++||+|+||.||+|...  .+++.||+|.+...    ....+|+.+++.++|+||     +++++++..
T Consensus        87 ~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~i-----v~~~~~~~~  157 (392)
T PHA03207         87 ASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAI-----INLIHAYRW  157 (392)
T ss_pred             chhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCc-----cceeeeEee
Confidence            3445678999999999999999999754  35678999988643    235679999999998887     999999999


Q ss_pred             CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          165 RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       165 ~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      ...+|+|||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++             
T Consensus       158 ~~~~~lv~e~~~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~-------------  222 (392)
T PHA03207        158 KSTVCMVMPKYKCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPE-------------  222 (392)
T ss_pred             CCEEEEEehhcCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC-------------
Confidence            9999999999988999999554  3799999999999999999999999999999999999997666             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                    .++|+|||++.......     ....||..|+|||++.+..++.++|||||||++|||++|..||.
T Consensus       223 --------------~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~  288 (392)
T PHA03207        223 --------------NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLF  288 (392)
T ss_pred             --------------CEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence                          45666666654432211     23478999999999999899999999999999999999999997


Q ss_pred             CCC---hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcC---CCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchh
Q 013678          320 THE---NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR---GARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  393 (438)
Q Consensus       320 ~~~---~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (438)
                      +..   ....+..+.+.++..|..+...........+..   ..+..+                 ..+...  .....+.
T Consensus       289 ~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~~  349 (392)
T PHA03207        289 GKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPY-----------------TIPPVI--RKYGMHM  349 (392)
T ss_pred             CCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCc-----------------cccchh--hccCcch
Confidence            654   345566666666655433211110000000000   000000                 000000  0113456


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      ++.+||.+||++||++|||+.|+|+||||.+.....
T Consensus       350 ~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~~  385 (392)
T PHA03207        350 DVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPINL  385 (392)
T ss_pred             hHHHHHHHHhccChhhCCCHHHHhhCchhhccchhh
Confidence            789999999999999999999999999998865543

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=9.9e-46  Score=346.90  Aligned_cols=248  Identities=23%  Similarity=0.363  Sum_probs=198.3

Q ss_pred             eeeecceEEEEEEECCCCcEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678          100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      ||+|+||+||++.+..+++.||+|.+.....    ..+.+..|+.+++.++|+++     +++.+++..++.+|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i-----~~~~~~~~~~~~~~lv~e~~   75 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFI-----VSLAYAFQTKTDLCLVMTIM   75 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcE-----eeeeEEEcCCCeEEEEEeCC
Confidence            6999999999999999999999999865322    23456789999999988777     99999999999999999999


Q ss_pred             -CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCccc
Q 013678          176 -GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  252 (438)
Q Consensus       176 -~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~  252 (438)
                       +++|.+++...  ....+++..++.++.||+.||+|||++||+||||||+||+++.++                     
T Consensus        76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~---------------------  134 (280)
T cd05608          76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDG---------------------  134 (280)
T ss_pred             CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC---------------------
Confidence             99999887542  234689999999999999999999999999999999999997655                     


Q ss_pred             CCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013678          253 NLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  329 (438)
Q Consensus       253 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~  329 (438)
                            .++|+|||.+......   .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...........
T Consensus       135 ------~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~  208 (280)
T cd05608         135 ------NVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE  208 (280)
T ss_pred             ------CEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHH
Confidence                  4677777766543222   1234789999999999999999999999999999999999999976543221111


Q ss_pred             HHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCC
Q 013678          330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  409 (438)
Q Consensus       330 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  409 (438)
                      +.......                                              .......++..+.+|+.+||+.||++
T Consensus       209 ~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~li~~~l~~~P~~  242 (280)
T cd05608         209 LKQRILND----------------------------------------------SVTYPDKFSPASKSFCEALLAKDPEK  242 (280)
T ss_pred             HHHhhccc----------------------------------------------CCCCcccCCHHHHHHHHHHhcCCHHH
Confidence            11100000                                              00112345778999999999999999


Q ss_pred             CC-----CHHHHhcCCCCCCC
Q 013678          410 RL-----KAREALRHPFFTRD  425 (438)
Q Consensus       410 Rp-----ta~ell~hp~f~~~  425 (438)
                      |+     |++++++||||++.
T Consensus       243 R~~~~~~~~~~~l~h~~~~~~  263 (280)
T cd05608         243 RLGFRDGNCDGLRTHPLFRDL  263 (280)
T ss_pred             hcCCCCCCHHHHhcChhhhcC
Confidence            99     89999999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=1.3e-45  Score=359.19  Aligned_cols=255  Identities=23%  Similarity=0.392  Sum_probs=206.7

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ..++|++.+.||+|+||.||+|++..+++.||+|++.+..    .....+.+|+.+++.++|+++     +++++.+.++
T Consensus        41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~i-----v~~~~~~~~~  115 (371)
T cd05622          41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV-----VQLFYAFQDD  115 (371)
T ss_pred             chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEEcC
Confidence            3478999999999999999999999999999999986422    223456789999999988887     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+|+||||+ +++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.+|             
T Consensus       116 ~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~-------------  179 (371)
T cd05622         116 RYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG-------------  179 (371)
T ss_pred             CEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCC-------------
Confidence            9999999999 99999998764   489999999999999999999999999999999999997655             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCCC----CCcchhHHHHHHHHHHHHhCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~il~elltg~~  316 (438)
                                    .+||+|||++......    ....+||+.|+|||++.+..    ++.++|||||||++|||++|..
T Consensus       180 --------------~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~  245 (371)
T cd05622         180 --------------HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT  245 (371)
T ss_pred             --------------CEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCC
Confidence                          5677777776544321    12457999999999997643    7899999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||.+.+.......+......                      ..+                        .....++..+.
T Consensus       246 Pf~~~~~~~~~~~i~~~~~~----------------------~~~------------------------~~~~~~s~~~~  279 (371)
T cd05622         246 PFYADSLVGTYSKIMNHKNS----------------------LTF------------------------PDDNDISKEAK  279 (371)
T ss_pred             CCCCCCHHHHHHHHHcCCCc----------------------ccC------------------------CCcCCCCHHHH
Confidence            99887765555444321110                      001                        11234577899


Q ss_pred             HHHHHccccCCCC--CCCHHHHhcCCCCCCC
Q 013678          397 DLLQGLLRYDPAE--RLKAREALRHPFFTRD  425 (438)
Q Consensus       397 ~ll~~~L~~dP~~--Rpta~ell~hp~f~~~  425 (438)
                      +||.+||..++.+  |++++|+++|+||++.
T Consensus       280 ~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         280 NLICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             HHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence            9999999844433  7899999999999874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-45  Score=353.05  Aligned_cols=256  Identities=26%  Similarity=0.404  Sum_probs=203.9

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++++.||+|+||.||++++..+++.||+|++.+..    ...+.+.+|+.++..++|++|     +.+++++.++++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~   75 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWI-----TNLHYAFQDENN   75 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCC-----CceEEEEecCCe
Confidence            46899999999999999999999999999999997522    233456789999988888877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|+||||+ +++|.+++.+.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++               
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~---------------  139 (331)
T cd05597          76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNG---------------  139 (331)
T ss_pred             EEEEEecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCC---------------
Confidence            99999999 999999997643 4689999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhC-----CCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                  .++|+|||++.......    ....||+.|+|||++.+     ..++.++|||||||++|+|++|+.|
T Consensus       140 ------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~P  207 (331)
T cd05597         140 ------------HIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETP  207 (331)
T ss_pred             ------------CEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCC
Confidence                        56777777765432221    22468999999999974     3478899999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+.+..+....+......                      ...+                       .....++.++++
T Consensus       208 f~~~~~~~~~~~i~~~~~~----------------------~~~~-----------------------~~~~~~~~~~~~  242 (331)
T cd05597         208 FYAESLVETYGKIMNHKEH----------------------FQFP-----------------------PDVTDVSEEAKD  242 (331)
T ss_pred             CCCCCHHHHHHHHHcCCCc----------------------ccCC-----------------------CccCCCCHHHHH
Confidence            9876655544443221100                      0000                       011235778999


Q ss_pred             HHHHccccCCCC--CCCHHHHhcCCCCCCC
Q 013678          398 LLQGLLRYDPAE--RLKAREALRHPFFTRD  425 (438)
Q Consensus       398 ll~~~L~~dP~~--Rpta~ell~hp~f~~~  425 (438)
                      ||++||..++++  |++++++++||||.+.
T Consensus       243 li~~ll~~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         243 LIRRLICSPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             HHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence            999998765444  7899999999999764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=8.1e-46  Score=354.64  Aligned_cols=244  Identities=27%  Similarity=0.420  Sum_probs=196.5

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecchh----hHHHHHHHHH-HHHHHHhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEID-VLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~-~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +.||+|+||+||+|++..+++.||||++.....    ....+..|.. +++.++|+++     +++++++...+.+|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~i-----v~~~~~~~~~~~~~lv~   75 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFL-----VGLHYSFQTADKLYFVL   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCC-----CCeeEEEEeCCEEEEEE
Confidence            468999999999999999999999999975321    2233444444 3456667666     99999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++                    
T Consensus        76 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~--------------------  133 (323)
T cd05575          76 DYVNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQG--------------------  133 (323)
T ss_pred             cCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--------------------
Confidence            999 999999997654  799999999999999999999999999999999999997665                    


Q ss_pred             cCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  328 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~  328 (438)
                             .+||+|||++....   .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+...
T Consensus       134 -------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~  206 (323)
T cd05575         134 -------HVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYD  206 (323)
T ss_pred             -------cEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHH
Confidence                   46677777665321   11233578999999999999899999999999999999999999998776555444


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+....                                                  .......+..+.+||.+||+.||+
T Consensus       207 ~i~~~~--------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~  236 (323)
T cd05575         207 NILNKP--------------------------------------------------LRLKPNISVSARHLLEGLLQKDRT  236 (323)
T ss_pred             HHHcCC--------------------------------------------------CCCCCCCCHHHHHHHHHHhhcCHH
Confidence            332210                                                  011123467899999999999999


Q ss_pred             CCCCH----HHHhcCCCCCCC
Q 013678          409 ERLKA----REALRHPFFTRD  425 (438)
Q Consensus       409 ~Rpta----~ell~hp~f~~~  425 (438)
                      +||++    .++++||||...
T Consensus       237 ~R~~~~~~~~~il~~~~~~~~  257 (323)
T cd05575         237 KRLGAKDDFLEIKNHVFFSSI  257 (323)
T ss_pred             hCCCCCCCHHHHHcCCCcCCC
Confidence            99987    699999999763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=1.2e-45  Score=354.01  Aligned_cols=248  Identities=23%  Similarity=0.383  Sum_probs=195.3

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +.||+|+||.||+|++..+++.||+|++++..    .....+.+|+.++..+ +|+++     +++++++...+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~i-----v~~~~~~~~~~~~~lv~   75 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL-----VGLHSCFQTESRLFFVI   75 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcC-----CceeeEEEeCCEEEEEE
Confidence            46999999999999999999999999997532    2334566788887766 56666     99999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++                    
T Consensus        76 E~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~--------------------  133 (329)
T cd05618          76 EYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--------------------  133 (329)
T ss_pred             eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC--------------------
Confidence            999 999999887654  799999999999999999999999999999999999997665                    


Q ss_pred             cCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH----
Q 013678          252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL----  324 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~----  324 (438)
                             .+||+|||++....   .......||..|+|||++.+..++.++|||||||++|+|++|..||......    
T Consensus       134 -------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~  206 (329)
T cd05618         134 -------HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD  206 (329)
T ss_pred             -------CEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcc
Confidence                   46677777665321   1223357899999999999999999999999999999999999999531110    


Q ss_pred             -HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          325 -EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       325 -~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                       .....+.+.                                        .      .......+...+..+.+||++||
T Consensus       207 ~~~~~~~~~~----------------------------------------i------~~~~~~~p~~~~~~~~~ll~~~L  240 (329)
T cd05618         207 QNTEDYLFQV----------------------------------------I------LEKQIRIPRSLSVKAASVLKSFL  240 (329)
T ss_pred             cccHHHHHHH----------------------------------------H------hcCCCCCCCCCCHHHHHHHHHHh
Confidence             000000000                                        0      00001122345678999999999


Q ss_pred             ccCCCCCCC------HHHHhcCCCCCCC
Q 013678          404 RYDPAERLK------AREALRHPFFTRD  425 (438)
Q Consensus       404 ~~dP~~Rpt------a~ell~hp~f~~~  425 (438)
                      +.||++|+|      +.++++||||++.
T Consensus       241 ~~dP~~R~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         241 NKDPKERLGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             cCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence            999999998      5899999999763

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.9e-45  Score=345.93  Aligned_cols=254  Identities=26%  Similarity=0.413  Sum_probs=204.7

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .|++.+.||+|+||.||+|.+..+++.||+|.+....    .....+.+|+.+++.++|+++     +.+++.+.+++.+
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i-----~~~~~~~~~~~~~   75 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFV-----VSLAYAYETKDAL   75 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCe-----eeeeEEEecCCEE
Confidence            3788899999999999999999999999999986432    223456789999999988877     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |+||||+ +++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++                
T Consensus        76 ~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~----------------  139 (285)
T cd05630          76 CLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHG----------------  139 (285)
T ss_pred             EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC----------------
Confidence            9999999 99999998765545699999999999999999999999999999999999997655                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                 .++|+|||++.......  ....|+..|+|||++.+..++.++|||||||++|+|++|..||.......
T Consensus       140 -----------~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~  208 (285)
T cd05630         140 -----------HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI  208 (285)
T ss_pred             -----------CEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc
Confidence                       46777777665433222  22478999999999998889999999999999999999999997643321


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ............                                              .......+++++.+||.+||+.
T Consensus       209 ~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~li~~~l~~  242 (285)
T cd05630         209 KREEVERLVKEV----------------------------------------------QEEYSEKFSPDARSLCKMLLCK  242 (285)
T ss_pred             hHHHHHhhhhhh----------------------------------------------hhhcCccCCHHHHHHHHHHhhc
Confidence            111111110000                                              0011234567899999999999


Q ss_pred             CCCCCCC-----HHHHhcCCCCCC
Q 013678          406 DPAERLK-----AREALRHPFFTR  424 (438)
Q Consensus       406 dP~~Rpt-----a~ell~hp~f~~  424 (438)
                      ||++|+|     ++|+++||||++
T Consensus       243 ~p~~R~s~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         243 DPKERLGCQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             CHHHccCCCCCchHHHHcChhhhc
Confidence            9999999     999999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=3.3e-46  Score=356.63  Aligned_cols=244  Identities=29%  Similarity=0.456  Sum_probs=202.3

Q ss_pred             eeeeeecceEEEEEEE---CCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           98 SKMGEGTFGQVVECFD---NEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~---~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      +.||+|+||.||++++   ..+|+.||+|++....   .......+|+.++.+++|+||     +++++++.+++.+|+|
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~lv   76 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFI-----VKLHYAFQTEGKLYLI   76 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCc-----ccEEEEEEcCCEEEEE
Confidence            6799999999999976   3578999999997533   233456789999999988887     9999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||+ +++|.+++.+..  .+++..++.++.||+.||+|||++||+||||||+|||++.++                   
T Consensus        77 ~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-------------------  135 (318)
T cd05582          77 LDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG-------------------  135 (318)
T ss_pred             EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCC-------------------
Confidence            9999 999999997654  699999999999999999999999999999999999997655                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  327 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~  327 (438)
                              .++|+|||++......   .....||..|+|||++.+..++.++|||||||++|+|++|+.||...+..+..
T Consensus       136 --------~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~  207 (318)
T cd05582         136 --------HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETM  207 (318)
T ss_pred             --------cEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHH
Confidence                    4677777776543322   22357899999999999888999999999999999999999999887665555


Q ss_pred             HHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCC
Q 013678          328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  407 (438)
Q Consensus       328 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  407 (438)
                      ..+.+....                                                  .+..+++.+.+||++||+.||
T Consensus       208 ~~i~~~~~~--------------------------------------------------~p~~~~~~~~~li~~~l~~~P  237 (318)
T cd05582         208 TMILKAKLG--------------------------------------------------MPQFLSPEAQSLLRALFKRNP  237 (318)
T ss_pred             HHHHcCCCC--------------------------------------------------CCCCCCHHHHHHHHHHhhcCH
Confidence            444321111                                                  112356789999999999999


Q ss_pred             CCCCC-----HHHHhcCCCCCCC
Q 013678          408 AERLK-----AREALRHPFFTRD  425 (438)
Q Consensus       408 ~~Rpt-----a~ell~hp~f~~~  425 (438)
                      ++|||     +.++++||||...
T Consensus       238 ~~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         238 ANRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             hHcCCCCCCCHHHHhCCCCcCCC
Confidence            99999     7889999999763

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-46  Score=354.63  Aligned_cols=243  Identities=25%  Similarity=0.371  Sum_probs=205.9

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      .++++++||+|.||.||+|....+ ..||+|.++......+.+.+|+.+|++|+|++|     |++++++..++.+||||
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~l-----V~l~gV~~~~~piyIVt  280 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKL-----VKLYGVCTKQEPIYIVT  280 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccChhHHHHHHHHHHhCcccCe-----EEEEEEEecCCceEEEE
Confidence            346678999999999999998644 359999998777777889999999999999988     99999999988999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||| .|+|.++|+...+..+.......++.||++|++||+++++|||||-..|||+++++.                   
T Consensus       281 E~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~-------------------  341 (468)
T KOG0197|consen  281 EYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLV-------------------  341 (468)
T ss_pred             EecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCce-------------------
Confidence            999 999999999866678999999999999999999999999999999999999987664                   


Q ss_pred             cCCCCCCCeEEecCCCCcccCCCCcc-cc---cCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEHQDHSY-VV---STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEH  326 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~~~~~~-~~---gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~  326 (438)
                              +||+|||+|+...++.-. ..   -...|.|||.+....++.|||||||||+||||+| |+.||.+.+..+.
T Consensus       342 --------vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev  413 (468)
T KOG0197|consen  342 --------VKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEV  413 (468)
T ss_pred             --------EEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHH
Confidence                    556666666533322211 11   2457999999999999999999999999999998 9999999999888


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      +..+.+..                       ++.                          .+..+++++.+++..||..+
T Consensus       414 ~~~le~Gy-----------------------Rlp--------------------------~P~~CP~~vY~lM~~CW~~~  444 (468)
T KOG0197|consen  414 LELLERGY-----------------------RLP--------------------------RPEGCPDEVYELMKSCWHED  444 (468)
T ss_pred             HHHHhccC-----------------------cCC--------------------------CCCCCCHHHHHHHHHHhhCC
Confidence            87776532                       222                          33467889999999999999


Q ss_pred             CCCCCCHHHHh
Q 013678          407 PAERLKAREAL  417 (438)
Q Consensus       407 P~~Rpta~ell  417 (438)
                      |++|||++.+.
T Consensus       445 P~~RPtF~~L~  455 (468)
T KOG0197|consen  445 PEDRPTFETLR  455 (468)
T ss_pred             cccCCCHHHHH
Confidence            99999998664

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=5e-45  Score=342.78  Aligned_cols=276  Identities=30%  Similarity=0.476  Sum_probs=210.8

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +|++.+.||+|+||.||+|.+..+|+.||+|.++...   .....+.+|+.+++.++|+|+     +++++++.+.+.++
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-----~~~~~~~~~~~~~~   75 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI-----VRLYDVLHSDKKLT   75 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCe-----eeHHHHhccCCceE
Confidence            5899999999999999999999999999999986432   223456789999999988877     99999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      +|+||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.                 
T Consensus        76 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~-----------------  137 (284)
T cd07839          76 LVFEYCDQDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGE-----------------  137 (284)
T ss_pred             EEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCc-----------------
Confidence            999999889999887643 46999999999999999999999999999999999999977664                 


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHhCCCCC-CCCChH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALF-QTHENL  324 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf-~~~~~~  324 (438)
                                ++|+|||++......   .....++..|+|||++.+.. ++.++|||||||++|+|++|..|| .+.+..
T Consensus       138 ----------~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~  207 (284)
T cd07839         138 ----------LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD  207 (284)
T ss_pred             ----------EEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH
Confidence                      555555555433221   12235788999999987754 789999999999999999998885 555556


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      ..+..+.+.++..+...+.........       ..++...              ......+.....++++.+||.+||+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~--------------~~~~~~~~~~~~~~~~~~li~~~l~  266 (284)
T cd07839         208 DQLKRIFRLLGTPTEESWPGVSKLPDY-------KPYPMYP--------------ATTSLVNVVPKLNSTGRDLLQNLLV  266 (284)
T ss_pred             HHHHHHHHHhCCCChHHhHHhhhcccc-------cccCCCC--------------CcchhhhhcccCCHHHHHHHHHHhc
Confidence            666667666665554332221110000       0000000              0000012234567899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCC
Q 013678          405 YDPAERLKAREALRHPFF  422 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f  422 (438)
                      .||.+|||++++++||||
T Consensus       267 ~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         267 CNPVQRISAEEALQHPYF  284 (284)
T ss_pred             CChhhcCCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=8.2e-45  Score=341.44  Aligned_cols=277  Identities=31%  Similarity=0.515  Sum_probs=212.5

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      .|++.+.||+|+||.||+|++..+++.||+|+++...   .....+.+|+.+++.+.|+|+     +++++++.+++.+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~   75 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNI-----VCLQDVLMQESRLY   75 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCE-----eeeEEEEeeCCeEE
Confidence            4889999999999999999999999999999986432   234567889999999988777     99999999999999


Q ss_pred             EEEccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKLGPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+.++|.+++.... +..+++..++.++.||+.||+|||++||+||||||+||+++.+|.                
T Consensus        76 ~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~----------------  139 (285)
T cd07861          76 LIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGV----------------  139 (285)
T ss_pred             EEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCc----------------
Confidence            999999779999887543 256899999999999999999999999999999999999977665                


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                 ++|+|||++......   .....++..|+|||++.+. .++.++|||||||++|+|++|+.||.+....
T Consensus       140 -----------~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~  208 (285)
T cd07861         140 -----------IKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI  208 (285)
T ss_pred             -----------EEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence                       455555554432211   1123568899999998765 4789999999999999999999999988877


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      .....+.+..+......+....... .+..     .++.               ............+++++.+||.+||+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~---------------~~~~~~~~~~~~~~~~~~~li~~~l~  267 (285)
T cd07861         209 DQLFRIFRILGTPTEDVWPGVTSLP-DYKN-----TFPK---------------WKKGSLRSAVKNLDEDGLDLLEKMLI  267 (285)
T ss_pred             HHHHHHHHHhCCCChhhhhcchhhH-HHHh-----hccc---------------cCcchhHHhcCCCCHHHHHHHHHHhc
Confidence            7776666666655443322111000 0000     0000               00001111233467899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCC
Q 013678          405 YDPAERLKAREALRHPFF  422 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f  422 (438)
                      .||++|||+.+|++||||
T Consensus       268 ~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         268 YDPAKRISAKKALNHPYF  285 (285)
T ss_pred             CChhhCCCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.5e-45  Score=357.31  Aligned_cols=274  Identities=24%  Similarity=0.374  Sum_probs=204.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      .+|++++.||+|+||.||+|.+..+++.||+|+....     ....|+.+++.++|+||     +++++++...+..|+|
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~lv  135 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSV-----IRMKDTLVSGAITCMV  135 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCC-----cChhheEEeCCeeEEE
Confidence            5799999999999999999999999999999985432     23568999999988887     9999999999999999


Q ss_pred             EccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          172 FEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       172 ~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||++.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++                    
T Consensus       136 ~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--------------------  194 (357)
T PHA03209        136 LPHYSSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVD--------------------  194 (357)
T ss_pred             EEccCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--------------------
Confidence            9999889999987644 4699999999999999999999999999999999999997655                    


Q ss_pred             cCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC-CCCCCh-----
Q 013678          252 KNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL-FQTHEN-----  323 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p-f~~~~~-----  323 (438)
                             .++|+|||.+......  .....||..|+|||++.+..++.++|||||||++|||+++..+ |.....     
T Consensus       195 -------~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~  267 (357)
T PHA03209        195 -------QVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEY  267 (357)
T ss_pred             -------CEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHH
Confidence                   5677777777643222  2235789999999999998999999999999999999985544 433211     


Q ss_pred             ----HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhcc-----chhhhhhccCCchhH
Q 013678          324 ----LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR-----LPNLIMQHVDHSAGD  394 (438)
Q Consensus       324 ----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  394 (438)
                          ...+..+...++..|..+....                    .. .....+.....     ............+.+
T Consensus       268 ~~~~~~~l~~~~~~~~~~~~~~~~~~--------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (357)
T PHA03209        268 VKSCHSHLLKIISTLKVHPEEFPRDP--------------------GS-RLVRGFIEYASLERQPYTRYPCFQRVNLPID  326 (357)
T ss_pred             HHHHHHHHHHHHHHhccChhhcCCCC--------------------cc-HHHHHHHhhcccCCCcccccHHHhccCCCch
Confidence                1223333333443333221000                    00 00000000000     000000111244667


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          395 LIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      +.+||.+||++||++||||.|+|+||||++
T Consensus       327 ~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        327 GEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             HHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence            889999999999999999999999999985

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.6e-45  Score=368.60  Aligned_cols=295  Identities=23%  Similarity=0.306  Sum_probs=204.7

Q ss_pred             eecCCccCCceEEEeeeeeecceEEEEEEECCCC-cEEEE------------------EEeecchhhHHHHHHHHHHHHH
Q 013678           84 FAIGENLTPRCKILSKMGEGTFGQVVECFDNEKK-ELVAI------------------KIVRSINKYREAAMIEIDVLQR  144 (438)
Q Consensus        84 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vai------------------K~~~~~~~~~~~~~~E~~~l~~  144 (438)
                      ...++.+.++|+++++||+|+||+||+|..+... ..+++                  |.+.........+.+|+.++..
T Consensus       140 ~~~~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~  219 (501)
T PHA03210        140 LKHDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGR  219 (501)
T ss_pred             cccchhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHh
Confidence            3445667789999999999999999998754322 21222                  2222223344567899999999


Q ss_pred             HHhcCCCCcceEEecceeccCCeEEEEEccCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 013678          145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNS---YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK  221 (438)
Q Consensus       145 l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  221 (438)
                      ++|+||     +++++++.+.+..|+||++++++|.+++....   ........++.++.||+.||+|||++||||||||
T Consensus       220 l~HpnI-----v~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLK  294 (501)
T PHA03210        220 LNHENI-----LKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIK  294 (501)
T ss_pred             CCCCCc-----CcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            999887     99999999999999999999889988876432   1224466788999999999999999999999999


Q ss_pred             CCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCc
Q 013678          222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNY  297 (438)
Q Consensus       222 p~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~  297 (438)
                      |+|||++.++                           .+||+|||++.......    ...+||..|+|||++.+..++.
T Consensus       295 P~NILl~~~~---------------------------~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  347 (501)
T PHA03210        295 LENIFLNCDG---------------------------KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCE  347 (501)
T ss_pred             HHHEEECCCC---------------------------CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCc
Confidence            9999997655                           56777777776543221    2357999999999999999999


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCC-C--ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHH
Q 013678          298 PCDLWSVGCILVELCSGEALFQT-H--ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV  374 (438)
Q Consensus       298 ~~DiwSlG~il~elltg~~pf~~-~--~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (438)
                      ++|||||||++|||++|..++.. .  ....++..+...++..+.++..... ....++...   .+..   ...     
T Consensus       348 ~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~i~~~---~~~~---~~~-----  415 (501)
T PHA03210        348 ITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPC-KLFDYIDSA---EIDH---AGH-----  415 (501)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHH-HHHHHhhhh---hccc---Ccc-----
Confidence            99999999999999998765432 2  2334444444433322221110000 000000000   0000   000     


Q ss_pred             HHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                          ..+....  ....+.++.++|.+||++||++|||+.|+|+||||+....+
T Consensus       416 ----~~~~~~~--~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~~  463 (501)
T PHA03210        416 ----SVPPLIR--NLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEEE  463 (501)
T ss_pred             ----chhhHHH--hcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCch
Confidence                0001110  11245678999999999999999999999999999886543

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=4.7e-45  Score=338.14  Aligned_cols=252  Identities=35%  Similarity=0.584  Sum_probs=204.7

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHH---HHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA---AMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~---~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      |++.+.||+|+||+||++.+..+++.||+|++.........   ..+|+.+++.+.|+++     +++++++.+....++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-----~~~~~~~~~~~~~~~   75 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNI-----VQILDVFQDDNYLYI   75 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTB-----CHEEEEEEESSEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccc-----ccccccccccccccc
Confidence            88999999999999999999999999999999865443332   3459999999988887     999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      |||++ +++|.+++....  .+++..+..++.||+.||++||++||+|+||||+||+++.++                  
T Consensus        76 v~~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~------------------  135 (260)
T PF00069_consen   76 VMEYCPGGSLQDYLQKNK--PLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENG------------------  135 (260)
T ss_dssp             EEEEETTEBHHHHHHHHS--SBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTS------------------
T ss_pred             cccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccc------------------
Confidence            99999 669999998443  699999999999999999999999999999999999997655                  


Q ss_pred             cccCCCCCCCeEEecCCCCccc---CCCCcccccCCCcchhHHHh-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFE---HQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                               .++|+|||.+...   ........++..|+|||++. +..++.++||||||+++|+|++|..||......+
T Consensus       136 ---------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~  206 (260)
T PF00069_consen  136 ---------EVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD  206 (260)
T ss_dssp             ---------EEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH
T ss_pred             ---------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence                     4567777766532   12223357899999999998 7789999999999999999999999998875445


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+.+.......                                           ............+.++|.+||+.
T Consensus       207 ~~~~~~~~~~~~~~-------------------------------------------~~~~~~~~~~~~l~~li~~~l~~  243 (260)
T PF00069_consen  207 QLEIIEKILKRPLP-------------------------------------------SSSQQSREKSEELRDLIKKMLSK  243 (260)
T ss_dssp             HHHHHHHHHHTHHH-------------------------------------------HHTTSHTTSHHHHHHHHHHHSSS
T ss_pred             hhhhhhhccccccc-------------------------------------------ccccccchhHHHHHHHHHHHccC
Confidence            44444332211000                                           00001112236899999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 013678          406 DPAERLKAREALRHPFF  422 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f  422 (438)
                      ||++|||+.++++||||
T Consensus       244 ~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  244 DPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             SGGGSTTHHHHHTSGGG
T ss_pred             ChhHCcCHHHHhcCCCC
Confidence            99999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-48  Score=340.85  Aligned_cols=254  Identities=25%  Similarity=0.425  Sum_probs=213.8

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      -|.++++||+|+||.||+|.++.+|+.||||.+.- ....+++.+|+.|++++..+.+     |++|+.|.....++|||
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV-~sDLQEIIKEISIMQQC~S~yV-----VKYYGSYFK~sDLWIVM  107 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV-DTDLQEIIKEISIMQQCKSKYV-----VKYYGSYFKHSDLWIVM  107 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc-cchHHHHHHHHHHHHHcCCchh-----hhhhhhhccCCceEeeh
Confidence            46789999999999999999999999999999864 4556778999999999987766     99999998889999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||| .|+..+.++.+. ..+++.++..+++.-+.||+|||...-||||||..|||++.+|.                   
T Consensus       108 EYCGAGSiSDI~R~R~-K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~-------------------  167 (502)
T KOG0574|consen  108 EYCGAGSISDIMRARR-KPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGI-------------------  167 (502)
T ss_pred             hhcCCCcHHHHHHHhc-CCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccch-------------------
Confidence            999 899999998665 68999999999999999999999999999999999999988775                   


Q ss_pred             cCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  328 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~  328 (438)
                              .||+|||.|......   ..++.||+.|||||++..-.|+.++||||||++..||..|++||........+.
T Consensus       168 --------AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF  239 (502)
T KOG0574|consen  168 --------AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF  239 (502)
T ss_pred             --------hhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE
Confidence                    556666666544332   345789999999999999999999999999999999999999998765544333


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      +|   .-.+|+                                            ....+..++.++.||+++||..+|+
T Consensus       240 MI---PT~PPP--------------------------------------------TF~KPE~WS~~F~DFi~~CLiK~PE  272 (502)
T KOG0574|consen  240 MI---PTKPPP--------------------------------------------TFKKPEEWSSEFNDFIRSCLIKKPE  272 (502)
T ss_pred             ec---cCCCCC--------------------------------------------CCCChHhhhhHHHHHHHHHhcCCHH
Confidence            22   111111                                            1122334577999999999999999


Q ss_pred             CCCCHHHHhcCCCCCCCCC
Q 013678          409 ERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       409 ~Rpta~ell~hp~f~~~~~  427 (438)
                      +|-||-++++|||+++...
T Consensus       273 ~R~TA~~L~~H~FiknA~g  291 (502)
T KOG0574|consen  273 ERKTALRLCEHTFIKNAPG  291 (502)
T ss_pred             HHHHHHHHhhhhhhcCCCc
Confidence            9999999999999998653

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=2.5e-45  Score=351.55  Aligned_cols=244  Identities=26%  Similarity=0.394  Sum_probs=196.1

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHH-HHHHHHhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEID-VLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~-~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +.||+|+||.||+|.+..+|+.||+|++.+..    .....+..|.. +++.++|+||     +++++++...+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~i-----v~~~~~~~~~~~~~lv~   75 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFL-----VGLHYSFQTTEKLYFVL   75 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCC-----ccEEEEEecCCEEEEEE
Confidence            46899999999999999999999999997532    22233444544 3555666666     99999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|..++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|                    
T Consensus        76 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~--------------------  133 (325)
T cd05604          76 DFVNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQG--------------------  133 (325)
T ss_pred             cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--------------------
Confidence            999 999999887654  799999999999999999999999999999999999997665                    


Q ss_pred             cCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  328 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~  328 (438)
                             .+||+|||++....   ......+||..|+|||++.+..++.++|||||||++|+|++|..||...+..+...
T Consensus       134 -------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~  206 (325)
T cd05604         134 -------HVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYD  206 (325)
T ss_pred             -------CEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHH
Confidence                   46677777665321   12233579999999999999999999999999999999999999998776555443


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+....                                                  .......+..+.++|.+||+.||.
T Consensus       207 ~~~~~~--------------------------------------------------~~~~~~~~~~~~~ll~~ll~~~p~  236 (325)
T cd05604         207 NILHKP--------------------------------------------------LVLRPGASLTAWSILEELLEKDRQ  236 (325)
T ss_pred             HHHcCC--------------------------------------------------ccCCCCCCHHHHHHHHHHhccCHH
Confidence            332210                                                  001123466889999999999999


Q ss_pred             CCCCH----HHHhcCCCCCCC
Q 013678          409 ERLKA----REALRHPFFTRD  425 (438)
Q Consensus       409 ~Rpta----~ell~hp~f~~~  425 (438)
                      +||++    .++++||||+..
T Consensus       237 ~R~~~~~~~~~i~~h~~f~~~  257 (325)
T cd05604         237 RRLGAKEDFLEIQEHPFFESL  257 (325)
T ss_pred             hcCCCCCCHHHHhcCCCcCCC
Confidence            99976    599999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=5.1e-45  Score=349.55  Aligned_cols=248  Identities=23%  Similarity=0.374  Sum_probs=196.3

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHH-hcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +.||+|+||.||+|++..+++.||+|++++..    ...+.+.+|+.++..+. |++     ++.+++++.+.+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-----i~~~~~~~~~~~~~~lv~   75 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPF-----LVGLHSCFQTTSRLFLVI   75 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCC-----EeeEEEEEEeCCEEEEEE
Confidence            46999999999999999999999999997532    23345678888888874 554     499999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++                    
T Consensus        76 e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~--------------------  133 (327)
T cd05617          76 EYVNGGDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADG--------------------  133 (327)
T ss_pred             eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCC--------------------
Confidence            999 999999887654  699999999999999999999999999999999999997665                    


Q ss_pred             cCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH---
Q 013678          252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE---  325 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~---  325 (438)
                             .+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.......   
T Consensus       134 -------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~  206 (327)
T cd05617         134 -------HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMN  206 (327)
T ss_pred             -------CEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccc
Confidence                   46677777665321   12233579999999999999999999999999999999999999996432110   


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+.+...                                              ......+...+..+.++|.+||+.
T Consensus       207 ~~~~~~~~~~----------------------------------------------~~~~~~p~~~~~~~~~li~~~L~~  240 (327)
T cd05617         207 TEDYLFQVIL----------------------------------------------EKPIRIPRFLSVKASHVLKGFLNK  240 (327)
T ss_pred             cHHHHHHHHH----------------------------------------------hCCCCCCCCCCHHHHHHHHHHhcc
Confidence            0000000000                                              000112234567899999999999


Q ss_pred             CCCCCCC------HHHHhcCCCCCCC
Q 013678          406 DPAERLK------AREALRHPFFTRD  425 (438)
Q Consensus       406 dP~~Rpt------a~ell~hp~f~~~  425 (438)
                      ||++|++      ++++++||||+..
T Consensus       241 dP~~R~~~~~~~~~~~i~~h~~f~~~  266 (327)
T cd05617         241 DPKERLGCQPQTGFSDIKSHTFFRSI  266 (327)
T ss_pred             CHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence            9999998      5799999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.2e-44  Score=340.50  Aligned_cols=255  Identities=24%  Similarity=0.367  Sum_probs=208.5

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .|++.+.||+|+||+||+|.+..+++.||+|.+....    .....+.+|+.+++.++|+++     +.+++.+..++..
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i-----~~~~~~~~~~~~~   75 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFV-----VNLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCc-----eeEEEEEecCCEE
Confidence            3788899999999999999999999999999986532    223456789999999998877     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |+||||+ +++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++                
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~----------------  139 (285)
T cd05632          76 CLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYG----------------  139 (285)
T ss_pred             EEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCC----------------
Confidence            9999999 89999988765545799999999999999999999999999999999999996554                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                 .++|+|||++.......  ....|+..|+|||++.+..++.++|||||||++|+|++|..||.......
T Consensus       140 -----------~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~  208 (285)
T cd05632         140 -----------HIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV  208 (285)
T ss_pred             -----------CEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                       56777777765433221  23478999999999998889999999999999999999999998766544


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+........                                              .......+.++.+|+.+||+.
T Consensus       209 ~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~~l~~  242 (285)
T cd05632         209 KREEVDRRVLETE----------------------------------------------EVYSAKFSEEAKSICKMLLTK  242 (285)
T ss_pred             HHHHHHHhhhccc----------------------------------------------cccCccCCHHHHHHHHHHccC
Confidence            4333322111000                                              011234566889999999999


Q ss_pred             CCCCCCC-----HHHHhcCCCCCCC
Q 013678          406 DPAERLK-----AREALRHPFFTRD  425 (438)
Q Consensus       406 dP~~Rpt-----a~ell~hp~f~~~  425 (438)
                      ||++|||     +.++++|+||++.
T Consensus       243 ~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05632         243 DPKQRLGCQEEGAGEVKRHPFFRNM  267 (285)
T ss_pred             CHhHcCCCcccChHHHHcChhhhcC
Confidence            9999999     8999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=5.7e-45  Score=349.10  Aligned_cols=243  Identities=26%  Similarity=0.421  Sum_probs=195.5

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecchh----hHHHHHHHHH-HHHHHHhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEID-VLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~-~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +.||+|+||.||+|++..+++.||+|++.....    ....+..|.. +++.+.|+||     +++++++...+.+|+||
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~I-----v~~~~~~~~~~~~~lv~   75 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL-----VGLHFSFQTADKLYFVL   75 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCC-----CceeEEEEcCCeEEEEE
Confidence            469999999999999999999999999975321    1223333433 4556667666     99999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++                    
T Consensus        76 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~--------------------  133 (325)
T cd05602          76 DYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG--------------------  133 (325)
T ss_pred             eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--------------------
Confidence            999 999999998654  688999999999999999999999999999999999997655                    


Q ss_pred             cCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  328 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~  328 (438)
                             .++|+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+...
T Consensus       134 -------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  206 (325)
T cd05602         134 -------HIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD  206 (325)
T ss_pred             -------CEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHH
Confidence                   46667777665321   12233579999999999999999999999999999999999999998776655544


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+....                                                  ......++..+.++|.+||+.||.
T Consensus       207 ~i~~~~--------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~  236 (325)
T cd05602         207 NILNKP--------------------------------------------------LQLKPNITNSARHLLEGLLQKDRT  236 (325)
T ss_pred             HHHhCC--------------------------------------------------cCCCCCCCHHHHHHHHHHcccCHH
Confidence            432210                                                  011234567899999999999999


Q ss_pred             CCCCHH----HHhcCCCCCC
Q 013678          409 ERLKAR----EALRHPFFTR  424 (438)
Q Consensus       409 ~Rpta~----ell~hp~f~~  424 (438)
                      +|+++.    ++++|+||..
T Consensus       237 ~R~~~~~~~~~i~~~~~~~~  256 (325)
T cd05602         237 KRLGAKDDFMEIKNHIFFSP  256 (325)
T ss_pred             HCCCCCCCHHHHhcCcccCC
Confidence            999875    8999999965

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=6.8e-45  Score=349.51  Aligned_cols=256  Identities=27%  Similarity=0.416  Sum_probs=202.7

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++.++||+|+||.||++++..+++.||+|++.+..    .....+.+|+.++..+.|+++     +.+++.+.+.+.
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~   75 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWI-----TTLHYAFQDENN   75 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCE-----eeEEEEEecCCE
Confidence            46899999999999999999999999999999986422    223346678888888777766     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|+||||+ +|+|.+++.+.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++               
T Consensus        76 ~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~---------------  139 (332)
T cd05623          76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG---------------  139 (332)
T ss_pred             EEEEEeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC---------------
Confidence            99999999 999999998643 3689999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhC-----CCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                  .++|+|||++......    ....+||+.|+|||++.+     ..++.++|||||||++|||++|+.|
T Consensus       140 ------------~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~P  207 (332)
T cd05623         140 ------------HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETP  207 (332)
T ss_pred             ------------CEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCC
Confidence                        4666777766432211    122479999999999873     3578999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |...+..+....+.....                      ...+|.                       ....+++++.+
T Consensus       208 f~~~~~~~~~~~i~~~~~----------------------~~~~p~-----------------------~~~~~s~~~~~  242 (332)
T cd05623         208 FYAESLVETYGKIMNHKE----------------------RFQFPA-----------------------QVTDVSEDAKD  242 (332)
T ss_pred             CCCCCHHHHHHHHhCCCc----------------------cccCCC-----------------------ccccCCHHHHH
Confidence            988766555544432100                      001110                       11245778999


Q ss_pred             HHHHccccCCCC--CCCHHHHhcCCCCCCC
Q 013678          398 LLQGLLRYDPAE--RLKAREALRHPFFTRD  425 (438)
Q Consensus       398 ll~~~L~~dP~~--Rpta~ell~hp~f~~~  425 (438)
                      ||++||..++.+  |++++|+++||||.+.
T Consensus       243 li~~ll~~~~~r~~r~~~~~~~~h~~f~~~  272 (332)
T cd05623         243 LIRRLICSREHRLGQNGIEDFKQHPFFTGI  272 (332)
T ss_pred             HHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence            999999765554  6899999999999863

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=6.5e-45  Score=349.44  Aligned_cols=256  Identities=26%  Similarity=0.403  Sum_probs=203.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++.+.||+|+||.||++++..+++.||+|++.+..    .....+.+|+.++..+.|++|     +++++++.+.+.
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~l~~~~~~~~~   75 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWI-----TTLHYAFQDENY   75 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEcCCE
Confidence            47899999999999999999999999999999987532    223446678888888877776     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      .|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++               
T Consensus        76 ~~lv~Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~---------------  139 (331)
T cd05624          76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNG---------------  139 (331)
T ss_pred             EEEEEeCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCC---------------
Confidence            99999999 999999998643 3689999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhC-----CCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                  .+||+|||++.......    ....||+.|+|||++.+     ..++.++|||||||++|+|++|+.|
T Consensus       140 ------------~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~P  207 (331)
T cd05624         140 ------------HIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP  207 (331)
T ss_pred             ------------CEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCC
Confidence                        46777777665433221    22479999999999876     4578899999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |...+..+....+.....                      +..++                       .....+++++.+
T Consensus       208 f~~~~~~~~~~~i~~~~~----------------------~~~~p-----------------------~~~~~~~~~~~~  242 (331)
T cd05624         208 FYAESLVETYGKIMNHEE----------------------RFQFP-----------------------SHITDVSEEAKD  242 (331)
T ss_pred             ccCCCHHHHHHHHHcCCC----------------------cccCC-----------------------CccccCCHHHHH
Confidence            987766554444322100                      00111                       111235678999


Q ss_pred             HHHHccccCCCC--CCCHHHHhcCCCCCCC
Q 013678          398 LLQGLLRYDPAE--RLKAREALRHPFFTRD  425 (438)
Q Consensus       398 ll~~~L~~dP~~--Rpta~ell~hp~f~~~  425 (438)
                      ||.+||..++++  |++++++++||||+..
T Consensus       243 li~~ll~~~~~~~~~~~~~~~~~h~~f~~~  272 (331)
T cd05624         243 LIQRLICSRERRLGQNGIEDFKKHAFFEGI  272 (331)
T ss_pred             HHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence            999999976654  5699999999999863

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=7.2e-45  Score=347.82  Aligned_cols=243  Identities=27%  Similarity=0.409  Sum_probs=195.2

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHH-HHHHHHhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEID-VLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~-~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +.||+|+||.||+|++..+++.||+|++.+..    .....+..|.. +++.++|+|+     +++++++.+.+.+|+||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~i-----v~~~~~~~~~~~~~lv~   75 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFL-----VGLHYSFQTAEKLYFVL   75 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCc-----cceeeEEEcCCEEEEEE
Confidence            46999999999999999999999999987532    12233444544 5667777776     99999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|.+.+....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|                    
T Consensus        76 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~--------------------  133 (321)
T cd05603          76 DYVNGGELFFHLQRER--CFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQG--------------------  133 (321)
T ss_pred             cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--------------------
Confidence            999 999998887654  689999999999999999999999999999999999997665                    


Q ss_pred             cCCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  328 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~  328 (438)
                             .+||+|||++.....   ......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+......
T Consensus       134 -------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  206 (321)
T cd05603         134 -------HVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYD  206 (321)
T ss_pred             -------CEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHH
Confidence                   466677776653211   1223578999999999998889999999999999999999999998876554443


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+....                                                  ...+...+..+.++|.+||+.||.
T Consensus       207 ~i~~~~--------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~  236 (321)
T cd05603         207 NILHKP--------------------------------------------------LQLPGGKTVAACDLLVGLLHKDQR  236 (321)
T ss_pred             HHhcCC--------------------------------------------------CCCCCCCCHHHHHHHHHHccCCHh
Confidence            332210                                                  011224466889999999999999


Q ss_pred             CCCCH----HHHhcCCCCCC
Q 013678          409 ERLKA----REALRHPFFTR  424 (438)
Q Consensus       409 ~Rpta----~ell~hp~f~~  424 (438)
                      +|+++    .++++|+||..
T Consensus       237 ~R~~~~~~~~~~~~~~~~~~  256 (321)
T cd05603         237 RRLGAKADFLEIKNHVFFSP  256 (321)
T ss_pred             hcCCCCCCHHHHhCCCCcCC
Confidence            99975    59999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=9.4e-45  Score=364.54  Aligned_cols=256  Identities=23%  Similarity=0.259  Sum_probs=206.1

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ...++|++.+.||+|+||+||+|.+..+++.||||++...   ......+.+|+.++..+.|+++     +++++.+...
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~i-----v~~~~~~~~~  103 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSI-----VKCHEDFAKK  103 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcE-----EEeecceecc
Confidence            3457999999999999999999999999999999998653   2334567789988888877766     8887766432


Q ss_pred             C--------eEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 013678          166 N--------HICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  234 (438)
Q Consensus       166 ~--------~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  234 (438)
                      .        .+++||||+ +|+|.+++...  ....+++..+..++.||+.||+|||++||+||||||+|||++.++   
T Consensus       104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~---  180 (496)
T PTZ00283        104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNG---  180 (496)
T ss_pred             cccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCC---
Confidence            2        478999999 99999999753  234689999999999999999999999999999999999997665   


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC-----CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHH
Q 013678          235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  309 (438)
Q Consensus       235 l~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  309 (438)
                                              .+||+|||+++....     ......||+.|+|||++.+..++.++|||||||++|
T Consensus       181 ------------------------~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvily  236 (496)
T PTZ00283        181 ------------------------LVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLY  236 (496)
T ss_pred             ------------------------CEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHH
Confidence                                    467777776654322     123457999999999999989999999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccC
Q 013678          310 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD  389 (438)
Q Consensus       310 elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (438)
                      ||++|..||.+.+..+.+..+....  .                                               ...+.
T Consensus       237 eLltG~~Pf~~~~~~~~~~~~~~~~--~-----------------------------------------------~~~~~  267 (496)
T PTZ00283        237 ELLTLKRPFDGENMEEVMHKTLAGR--Y-----------------------------------------------DPLPP  267 (496)
T ss_pred             HHHHCCCCCCCCCHHHHHHHHhcCC--C-----------------------------------------------CCCCC
Confidence            9999999998766554443332110  0                                               01123


Q ss_pred             CchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       390 ~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .+++++.+||.+||+.||.+|||+.++++|||++..
T Consensus       268 ~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~  303 (496)
T PTZ00283        268 SISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF  303 (496)
T ss_pred             CCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence            456789999999999999999999999999998753

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1.3e-44  Score=345.52  Aligned_cols=284  Identities=25%  Similarity=0.468  Sum_probs=202.1

Q ss_pred             eeeeeecceEEEEEEECC--CCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec--cCCeEEEEEc
Q 013678           98 SKMGEGTFGQVVECFDNE--KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD--YRNHICIVFE  173 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~--~~~~~~lv~e  173 (438)
                      .+||+|+||.||+|.+..  ++..||+|.+.... ....+.+|+.+++.++|+|+     +++++++.  .+..+|+|||
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~~~lv~e   80 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKHPNV-----IALQKVFLSHSDRKVWLLFD   80 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCe-----eeEEEEEeccCCCeEEEEEe
Confidence            579999999999998654  56889999986533 23457789999999998877     99999874  4568999999


Q ss_pred             cCCCCHHHHHHhc-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          174 KLGPSLYDFLRKN-------SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       174 ~~~~~L~~~l~~~-------~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      |++++|.+++...       ....+++..++.++.||+.||.|||++||+||||||+|||+..++               
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~---------------  145 (317)
T cd07867          81 YAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG---------------  145 (317)
T ss_pred             eeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCC---------------
Confidence            9988999888532       123588999999999999999999999999999999999995432               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC------CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                              +.+..+||+|||++......      .....||..|+|||++.+. .++.++|||||||++|||++|..||.
T Consensus       146 --------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~  217 (317)
T cd07867         146 --------PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  217 (317)
T ss_pred             --------CCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence                    23446888888888654332      1234789999999999874 48999999999999999999999997


Q ss_pred             CCCh---------HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC
Q 013678          320 THEN---------LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  390 (438)
Q Consensus       320 ~~~~---------~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (438)
                      ....         ..++..+...++......+........ +......  +......         ..............
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~---------~~~~~~~~~~~~~~  285 (317)
T cd07867         218 CRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPE-YPTLQKD--FRRTTYA---------NSSLIKYMEKHKVK  285 (317)
T ss_pred             cccccccccccccHHHHHHHHHhcCCCChhhhhhhhhccc-chhhhhh--hcccccC---------CchhhhhhhcccCC
Confidence            5432         234455555555544333222111000 0000000  0000000         00000001111223


Q ss_pred             chhHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q 013678          391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       391 ~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      .+..+.+||.+||+.||.+|||+.|+|+||||
T Consensus       286 ~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         286 PDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             CChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            45678999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=4e-45  Score=350.50  Aligned_cols=307  Identities=20%  Similarity=0.245  Sum_probs=212.6

Q ss_pred             EEeeeeee--cceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           96 ILSKMGEG--TFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        96 ~~~~lg~G--~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      ++++||+|  +|++||++.+..+|+.||+|+++..   ....+.+.+|+.+++.++|+||     +++++++..++..|+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpni-----v~~~~~~~~~~~~~l   76 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNI-----VPYRATFIADNELWV   76 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCe-----eeEEEEEEECCEEEE
Confidence            56789999  7899999999999999999999753   2334567789999999988887     999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||+ +++|.+++..+....+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+...       
T Consensus        77 v~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~-------  149 (327)
T cd08227          77 VTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNL-------  149 (327)
T ss_pred             EEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhh-------
Confidence            99999 9999999976544568999999999999999999999999999999999999988887777775422       


Q ss_pred             cccCCCCCCCeEEecCCCCcc-cCCCCcccccCCCcchhHHHhC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTF-EHQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~-~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                                 .+.++|.... .........++..|+|||++.+  ..++.++|||||||++|+|++|..||........
T Consensus       150 -----------~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  218 (327)
T cd08227         150 -----------SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM  218 (327)
T ss_pred             -----------ccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH
Confidence                       2222222111 1111122356788999999986  3589999999999999999999999986554443


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhh----cCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYF----RRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ....  ..+..|......... .....    ..+....+..+......     ...............+++++.+||.+|
T Consensus       219 ~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~  290 (327)
T cd08227         219 LLEK--LNGTVPCLLDTTTIP-AEELTMKPSRSGANSGLGESTTVSTP-----RPSNGESSSHPYNRTFSPHFHHFVEQC  290 (327)
T ss_pred             HHHH--hcCCccccccccchh-hhhcccCCcccCCcCCCCcccccCCc-----CccccCCcccccccccCHHHHHHHHHH
Confidence            2222  222222111000000 00000    00000000000000000     000000001112234577899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCCCceeee
Q 013678          403 LRYDPAERLKAREALRHPFFTRDVRRPTLLV  433 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~~~~~~~~~  433 (438)
                      |++||++|||++|+++||||++-.++++..+
T Consensus       291 l~~dP~~Rpt~~ell~~p~f~~~~~~~~~~~  321 (327)
T cd08227         291 LQRNPDARPSASTLLNHSFFKQIKRRASEAL  321 (327)
T ss_pred             HhhCchhcCCHHHHhcChhhhhcchhhhhhh
Confidence            9999999999999999999988665554443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-45  Score=352.68  Aligned_cols=246  Identities=27%  Similarity=0.438  Sum_probs=193.7

Q ss_pred             eeeecceEEEEEEECCCCcEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678          100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      ||+|+||+||+|++..+++.||||++.+...    .......|..++..+...  .|++++.+++++.+.+.+|+||||+
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~p~i~~~~~~~~~~~~~~lv~e~~   78 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLD--ESPFIVGLKFSFQTDSDLYLVTDYM   78 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccC--CCCcCcceEEEEecCCeEEEEEcCC
Confidence            7999999999999999999999999865321    223344566666655311  2344599999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCC
Q 013678          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  254 (438)
Q Consensus       176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~  254 (438)
                       +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++                       
T Consensus        79 ~~g~L~~~l~~~~--~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~-----------------------  133 (330)
T cd05586          79 SGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG-----------------------  133 (330)
T ss_pred             CCChHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC-----------------------
Confidence             999999987654  799999999999999999999999999999999999997655                       


Q ss_pred             CCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 013678          255 PKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM  330 (438)
Q Consensus       255 ~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i  330 (438)
                          .++|+|||++.....   .....+||..|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+....+
T Consensus       134 ----~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i  209 (330)
T cd05586         134 ----HIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNI  209 (330)
T ss_pred             ----CEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHH
Confidence                466777776654211   12335799999999999765 4899999999999999999999999876655444333


Q ss_pred             HHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCC
Q 013678          331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  410 (438)
Q Consensus       331 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  410 (438)
                      ......+|                                                 ...+++++.+||++||+.||++|
T Consensus       210 ~~~~~~~~-------------------------------------------------~~~~~~~~~~li~~~L~~~P~~R  240 (330)
T cd05586         210 AFGKVRFP-------------------------------------------------KNVLSDEGRQFVKGLLNRNPQHR  240 (330)
T ss_pred             HcCCCCCC-------------------------------------------------CccCCHHHHHHHHHHcCCCHHHC
Confidence            21100000                                                 01246688999999999999999


Q ss_pred             C----CHHHHhcCCCCCCC
Q 013678          411 L----KAREALRHPFFTRD  425 (438)
Q Consensus       411 p----ta~ell~hp~f~~~  425 (438)
                      |    ++.++++||||.+.
T Consensus       241 ~~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         241 LGAHRDAVELKEHPFFADI  259 (330)
T ss_pred             CCCCCCHHHHhcCccccCC
Confidence            8    79999999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-46  Score=343.45  Aligned_cols=258  Identities=26%  Similarity=0.408  Sum_probs=217.1

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      .+.|+.-+.||+|+||.||-++-+.||+.||+|.+.+.    .......++|-.||.+++.+.|     |.+--.|++.+
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~Fi-----VslaYAfeTkd  258 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFI-----VSLAYAFETKD  258 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcE-----EEEeeeecCCC
Confidence            35678889999999999999999999999999988642    2344567889999999988876     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      .+|+||..| ||+|.-+|...++..+++..++.|+.+|+.||++||+.+||.|||||+|||+++.|+             
T Consensus       259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~Gh-------------  325 (591)
T KOG0986|consen  259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGH-------------  325 (591)
T ss_pred             ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCC-------------
Confidence            999999999 999999998888788999999999999999999999999999999999999988775             


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                    ++|+|+|+|......  ....+||..|||||++.+..|+...|+|||||+||||+.|+.||.....
T Consensus       326 --------------vRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke  391 (591)
T KOG0986|consen  326 --------------VRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE  391 (591)
T ss_pred             --------------eEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh
Confidence                          555666666544332  2335999999999999999999999999999999999999999987665


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      ......+.+..-..+                                              .+.++..|+++++|.+.+|
T Consensus       392 Kvk~eEvdrr~~~~~----------------------------------------------~ey~~kFS~eakslc~~LL  425 (591)
T KOG0986|consen  392 KVKREEVDRRTLEDP----------------------------------------------EEYSDKFSEEAKSLCEGLL  425 (591)
T ss_pred             hhhHHHHHHHHhcch----------------------------------------------hhcccccCHHHHHHHHHHH
Confidence            554444443322211                                              2234567889999999999


Q ss_pred             ccCCCCCC-----CHHHHhcCCCCCCCC
Q 013678          404 RYDPAERL-----KAREALRHPFFTRDV  426 (438)
Q Consensus       404 ~~dP~~Rp-----ta~ell~hp~f~~~~  426 (438)
                      +.||++|.     +++++.+||||++--
T Consensus       426 ~Kdp~~RLGcrg~ga~evk~HpfFk~ln  453 (591)
T KOG0986|consen  426 TKDPEKRLGCRGEGAQEVKEHPFFKDLN  453 (591)
T ss_pred             ccCHHHhccCCCcCcchhhhCcccccCC
Confidence            99999998     588999999999843

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1.3e-44  Score=338.69  Aligned_cols=248  Identities=23%  Similarity=0.419  Sum_probs=197.0

Q ss_pred             eeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678          100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      ||+|+||.||++.+..+|+.||+|.+....    ........|+.+++.++|+|+     ++++++++++.++|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i-----~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFI-----VNLAYAFESKTHLCLVMSLM   75 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcE-----EEEEEEEecCCeEEEEEecC
Confidence            699999999999999999999999986422    123345679999999988877     99999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCC
Q 013678          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  254 (438)
Q Consensus       176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~  254 (438)
                       +++|.+++.......+++..+..++.||+.||+|||++||+||||||+||+++.++                       
T Consensus        76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~-----------------------  132 (277)
T cd05607          76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQG-----------------------  132 (277)
T ss_pred             CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCC-----------------------
Confidence             99999998766555689999999999999999999999999999999999997655                       


Q ss_pred             CCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 013678          255 PKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  332 (438)
Q Consensus       255 ~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~  332 (438)
                          .++|+|||++.......  ....|+..|+|||++.+..++.++|||||||++|+|++|..||...........+..
T Consensus       133 ----~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~  208 (277)
T cd05607         133 ----NCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKR  208 (277)
T ss_pred             ----CEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHH
Confidence                46677777665433222  224689999999999988899999999999999999999999976433211111111


Q ss_pred             -HhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCC
Q 013678          333 -VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  411 (438)
Q Consensus       333 -~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  411 (438)
                       ....                                             . .......++.++.+||.+||+.||++||
T Consensus       209 ~~~~~---------------------------------------------~-~~~~~~~~~~~~~~li~~~L~~~P~~R~  242 (277)
T cd05607         209 RTLED---------------------------------------------E-VKFEHQNFTEESKDICRLFLAKKPEDRL  242 (277)
T ss_pred             Hhhcc---------------------------------------------c-cccccccCCHHHHHHHHHHhccCHhhCC
Confidence             0000                                             0 0001123567899999999999999999


Q ss_pred             CH----HHHhcCCCCCCC
Q 013678          412 KA----REALRHPFFTRD  425 (438)
Q Consensus       412 ta----~ell~hp~f~~~  425 (438)
                      ++    ++++.||||+.-
T Consensus       243 ~~~~~~~~~~~h~~f~~~  260 (277)
T cd05607         243 GSREKNDDPRKHEFFKTI  260 (277)
T ss_pred             CCccchhhhhcChhhcCC
Confidence            99    778899999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=3.7e-44  Score=341.16  Aligned_cols=282  Identities=29%  Similarity=0.443  Sum_probs=216.1

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh---hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC--
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~--  165 (438)
                      .++|++.+.||+|+||.||+|.+..+|+.||+|+++....   ......+|+.+++.++|+++     +++++++...  
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~   80 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNI-----VELKEVVVGKHL   80 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCC-----cceEEEEecCCC
Confidence            3679999999999999999999999999999999864322   22345679999999999888     9999988654  


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      +.+++||||++++|.+++.... ..+++..+..++.||+.||+|||++|++||||||+||+++.++.             
T Consensus        81 ~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~-------------  146 (309)
T cd07845          81 DSIFLVMEYCEQDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGC-------------  146 (309)
T ss_pred             CeEEEEEecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC-------------
Confidence            5789999999879999987643 46899999999999999999999999999999999999976664             


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                    ++|+|||.+......   .....++..|+|||++.+. .++.++|||||||++|+|++|..||...
T Consensus       147 --------------~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~  212 (309)
T cd07845         147 --------------LKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK  212 (309)
T ss_pred             --------------EEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence                          566666655543322   1223457889999998764 5789999999999999999999999999


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +..+.+..+....+..+..++.........     .....+..              ... .........++++.+||.+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--------------~~~-~~~~~~~~~~~~~~~li~~  272 (309)
T cd07845         213 SEIEQLDLIIQLLGTPNESIWPGFSDLPLV-----GKFTLPKQ--------------PYN-NLKHKFPWLSEAGLRLLNF  272 (309)
T ss_pred             CHHHHHHHHHHhcCCCChhhchhhhccccc-----ccccccCC--------------CCC-chHHhccccCHHHHHHHHH
Confidence            988888888887776655443222110000     00000000              000 0011122347788999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCC
Q 013678          402 LLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      ||++||++|||+.|+++||||++.
T Consensus       273 ml~~dp~~R~t~~~il~h~~f~~~  296 (309)
T cd07845         273 LLMYDPKKRATAEEALESSYFKEK  296 (309)
T ss_pred             HhcCChhhCcCHHHHhcChhhccC
Confidence            999999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=3e-44  Score=338.66  Aligned_cols=251  Identities=27%  Similarity=0.436  Sum_probs=211.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++.+.||+|+||.||++.+..+++.||+|++....    ...+.+.+|+.+++++.|+|+     +++++++.+++.
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~   75 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFL-----VNLYGSFQDDSN   75 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCc-----cceeeEEEcCCe
Confidence            46899999999999999999999999999999987532    334667889999999998877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+|+||+|+||+++.++               
T Consensus        76 ~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~---------------  138 (290)
T cd05580          76 LYLVMEYVPGGELFSHLRKSG--RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG---------------  138 (290)
T ss_pred             EEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC---------------
Confidence            99999999 999999998764  799999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                                  .++|+|||++...........|++.|+|||.+.+...+.++||||||+++|+|++|..||...+....
T Consensus       139 ------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  206 (290)
T cd05580         139 ------------YIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQI  206 (290)
T ss_pred             ------------CEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                        57777777776655544456789999999999888889999999999999999999999987664433


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      ...+......                                                  .+...+..+.++|.+||..|
T Consensus       207 ~~~~~~~~~~--------------------------------------------------~~~~~~~~l~~li~~~l~~~  236 (290)
T cd05580         207 YEKILEGKVR--------------------------------------------------FPSFFSPDAKDLIRNLLQVD  236 (290)
T ss_pred             HHHHhcCCcc--------------------------------------------------CCccCCHHHHHHHHHHccCC
Confidence            3333211101                                                  11234668899999999999


Q ss_pred             CCCCC-----CHHHHhcCCCCCCCC
Q 013678          407 PAERL-----KAREALRHPFFTRDV  426 (438)
Q Consensus       407 P~~Rp-----ta~ell~hp~f~~~~  426 (438)
                      |.+|+     +++|+++||||+...
T Consensus       237 p~~R~~~~~~~~~~l~~~~~~~~~~  261 (290)
T cd05580         237 LTKRLGNLKNGVNDIKNHPWFAGID  261 (290)
T ss_pred             HHHccCcccCCHHHHHcCcccccCC
Confidence            99999     999999999998754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2.4e-44  Score=361.30  Aligned_cols=252  Identities=23%  Similarity=0.255  Sum_probs=206.6

Q ss_pred             CceEEEeeeeeecceEEEEEEECCC-CcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ..|.+.+.||+|+||.||+|.+..+ ++.||+|.+.... .....+.+|+.+++.++|+||     +++++++..++++|
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpni-----v~~~~~~~~~~~~~  141 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGI-----VKHFDDFKSDDKLL  141 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCE-----eEEEEEEEECCEEE
Confidence            4599999999999999999998877 7889999775433 334556789999999998887     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          170 IVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      |||||+ +++|.+++...  ....+++..+..++.||+.||.|||++||+||||||+|||++.++               
T Consensus       142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~---------------  206 (478)
T PTZ00267        142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTG---------------  206 (478)
T ss_pred             EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCC---------------
Confidence            999999 99999988642  224689999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                  .+||+|||++......     ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus       207 ------------~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~  274 (478)
T PTZ00267        207 ------------IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP  274 (478)
T ss_pred             ------------cEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence                        4677777766543322     22357999999999999989999999999999999999999999876


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +..+.+..+...  ..+                                               ..+..++.++.+||.+
T Consensus       275 ~~~~~~~~~~~~--~~~-----------------------------------------------~~~~~~s~~~~~li~~  305 (478)
T PTZ00267        275 SQREIMQQVLYG--KYD-----------------------------------------------PFPCPVSSGMKALLDP  305 (478)
T ss_pred             CHHHHHHHHHhC--CCC-----------------------------------------------CCCccCCHHHHHHHHH
Confidence            665544433221  000                                               0112356789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCC
Q 013678          402 LLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      ||..||++|||+.+++.|+|++.
T Consensus       306 ~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        306 LLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             HhccChhhCcCHHHHHhCHHHHH
Confidence            99999999999999999999863

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=2.8e-44  Score=337.90  Aligned_cols=278  Identities=36%  Similarity=0.603  Sum_probs=216.2

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +|++.+.||+|+||.||+|.+..+|+.||+|++....   .....+.+|+.+++.++|+|+     +++++++..+...+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~   75 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYV-----VKLLDVFPHGSGFV   75 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCC-----cceeeEEecCCeeE
Confidence            5899999999999999999999999999999987532   334678899999999988877     99999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      +||||++++|.+++.... ..+++..++.++.||+.||+|||++||+|+||||+||+++.++                  
T Consensus        76 ~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~------------------  136 (286)
T cd07832          76 LVMEYMPSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADG------------------  136 (286)
T ss_pred             EEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCC------------------
Confidence            999999999999987654 5699999999999999999999999999999999999997665                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                               .++|+|||.+......    .....|+..|+|||.+.+.. ++.++|||||||++|+|++|.++|.+..+.
T Consensus       137 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~  207 (286)
T cd07832         137 ---------VLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI  207 (286)
T ss_pred             ---------cEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH
Confidence                     4566666665543322    22346889999999987654 689999999999999999999999888887


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      ..+..+....+.+....+....... .+    ....++...               ........+..+..+.+||++||+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~---------------~~~~~~~~~~~~~~~~~li~~~l~  267 (286)
T cd07832         208 EQLAIVFRTLGTPNEETWPGLTSLP-DY----NKITFPESK---------------PIPLEEIFPDASPEALDLLKGLLV  267 (286)
T ss_pred             HHHHHHHHHcCCCChHHHhhccCcc-hh----hcccCCCCC---------------cchHHHhCCCccHHHHHHHHHHhc
Confidence            7777777666655432221110000 00    000010000               000112223556789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCC
Q 013678          405 YDPAERLKAREALRHPFFT  423 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~  423 (438)
                      .||++|||++++++||||.
T Consensus       268 ~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         268 YDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             cChhhCCCHHHHhhCcCcC
Confidence            9999999999999999995

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=7.9e-44  Score=335.90  Aligned_cols=278  Identities=29%  Similarity=0.482  Sum_probs=210.9

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ++|++.+.||+|+||.||+|.++.+++.||||.+....  .....+.+|+.+++.++|+|+     +++++++.+.+..|
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~   79 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANI-----VTLHDIIHTKKTLT   79 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcce-----eeEEEEEecCCeEE
Confidence            67999999999999999999999899999999986432  223456789999999998877     99999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      +||||+.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.                 
T Consensus        80 lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~-----------------  141 (291)
T cd07844          80 LVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGE-----------------  141 (291)
T ss_pred             EEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCC-----------------
Confidence            999999779999987654 36899999999999999999999999999999999999977664                 


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCC-hH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHE-NL  324 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~-~~  324 (438)
                                ++|+|||.+......   .....++..|+|||++.+. .++.++|||||||++|+|++|..||.... ..
T Consensus       142 ----------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~  211 (291)
T cd07844         142 ----------LKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE  211 (291)
T ss_pred             ----------EEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH
Confidence                      566666655432211   1123567889999998764 58899999999999999999999997765 45


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCch--hHHHHHHHHc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA--GDLIDLLQGL  402 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~ll~~~  402 (438)
                      +.+..+.+.++.+....+............     .++.              . ............+  .++.++|.+|
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--------------~-~~~~~~~~~~~~~~~~~~~~li~~~  271 (291)
T cd07844         212 DQLHKIFRVLGTPTEETWPGVSSNPEFKPY-----SFPF--------------Y-PPRPLINHAPRLDRIPHGEELALKF  271 (291)
T ss_pred             HHHHHHHHhcCCCChhhhhhhhhccccccc-----cccc--------------c-CChhHHHhCcCCCCchhHHHHHHHH
Confidence            566666666666554443322211000000     0000              0 0000011111223  6889999999


Q ss_pred             cccCCCCCCCHHHHhcCCCC
Q 013678          403 LRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f  422 (438)
                      |+.||++|||+.|+++||||
T Consensus       272 L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         272 LQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             hccCcccccCHHHHhcCCCC
Confidence            99999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=2.4e-44  Score=335.89  Aligned_cols=253  Identities=22%  Similarity=0.396  Sum_probs=202.3

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceecc----
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDY----  164 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~----  164 (438)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++.........+..|+.++..+ .|+|+     +++++++..    
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----~~~~~~~~~~~~~   78 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNI-----ATYYGAFIKKNPP   78 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCe-----eeEeeEEeecCCC
Confidence            34678999999999999999999999999999999976655566788899999988 46666     999998864    


Q ss_pred             --CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          165 --RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       165 --~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                        ...+|+||||+ +++|.+++.......+++..+..++.|++.||+|||+++|+|+||||+||+++.++          
T Consensus        79 ~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~----------  148 (272)
T cd06637          79 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA----------  148 (272)
T ss_pred             CCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCC----------
Confidence              34789999999 88999999875545789999999999999999999999999999999999997655          


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhC-----CCCCcchhHHHHHHHHHHHHh
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCS  313 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~ellt  313 (438)
                                       .++|+|||++.....   ......|+..|+|||++.+     ..++.++|||||||++|+|++
T Consensus       149 -----------------~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~  211 (272)
T cd06637         149 -----------------EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE  211 (272)
T ss_pred             -----------------CEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHh
Confidence                             466777776654322   1223578999999999863     357889999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchh
Q 013678          314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  393 (438)
Q Consensus       314 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (438)
                      |..||...........+....  .                                              .......++.
T Consensus       212 g~~p~~~~~~~~~~~~~~~~~--~----------------------------------------------~~~~~~~~~~  243 (272)
T cd06637         212 GAPPLCDMHPMRALFLIPRNP--A----------------------------------------------PRLKSKKWSK  243 (272)
T ss_pred             CCCCccccCHHHHHHHHhcCC--C----------------------------------------------CCCCCCCcCH
Confidence            999997554333222111000  0                                              0001123456


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCC
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      ++.+||.+||..||.+|||+.++++||||
T Consensus       244 ~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         244 KFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            89999999999999999999999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=7.5e-44  Score=342.99  Aligned_cols=284  Identities=29%  Similarity=0.505  Sum_probs=215.6

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC--
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~--  165 (438)
                      +.++|++.++||+|+||.||+|.+..+|+.||||++...  ......+.+|+.+++.++|+|+     +++++++...  
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~   77 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENI-----IGILDIIRPPSF   77 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCc-----Cchhheeecccc
Confidence            457899999999999999999999999999999998642  2334567789999999998887     8888875533  


Q ss_pred             ---CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          166 ---NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       166 ---~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                         ..+|+||||++++|.+++...   .+++..++.++.||+.||+|||++||+||||||+||+++.++.+         
T Consensus        78 ~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~---------  145 (336)
T cd07849          78 ESFNDVYIVQELMETDLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDL---------  145 (336)
T ss_pred             cccceEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCE---------
Confidence               468999999988999888653   59999999999999999999999999999999999999776654         


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCC------CcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~  315 (438)
                                        +|+|||++......      .....||..|+|||.+.+ ..++.++|||||||++|+|++|+
T Consensus       146 ------------------kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~  207 (336)
T cd07849         146 ------------------KICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNR  207 (336)
T ss_pred             ------------------EECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence                              55555544332211      122468899999998765 45889999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhh-hhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRR-AEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      .||.+.+.......+...++..+.+........ ...+....     +.               ..........+..+.+
T Consensus       208 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---------------~~~~~~~~~~~~~~~~  267 (336)
T cd07849         208 PLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSL-----PF---------------KPKVPWNKLFPNADPK  267 (336)
T ss_pred             CCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhc-----Cc---------------CCcccHHHHhcccCcH
Confidence            999988887888888777776554332221110 00010000     00               0000000112345778


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          395 LIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      +.+||.+||+.||++|||+.|+++||||+.-...
T Consensus       268 ~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~  301 (336)
T cd07849         268 ALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP  301 (336)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence            9999999999999999999999999999876543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=4.9e-44  Score=336.06  Aligned_cols=277  Identities=32%  Similarity=0.520  Sum_probs=215.6

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +|++++.||.|++|.||+|++..+++.||||+++...   .....+.+|++++++++|+|+     +++++++.+++..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~   75 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----VKLLDVIHTENKLY   75 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCC-----cchhhhcccCCcEE
Confidence            4889999999999999999999999999999886432   223567889999999998887     99999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      +||||+.++|.+++.......+++..+..++.||+.||+|||++|++|+||+|+||+++.++                  
T Consensus        76 ~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~------------------  137 (284)
T cd07860          76 LVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG------------------  137 (284)
T ss_pred             EEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC------------------
Confidence            99999977999998776556799999999999999999999999999999999999997666                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                               .++|+|||.+......   .....++..|+|||++.+.. ++.++|||||||++|+|+||..||.+.+..+
T Consensus       138 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~  208 (284)
T cd07860         138 ---------AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID  208 (284)
T ss_pred             ---------CEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence                     4566666655433221   12235688899999887654 6889999999999999999999999888887


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+.+..+..+...+.......... .     .++..               ............+.++.++|.+||+.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~---------------~~~~~~~~~~~~~~~~~~li~~~l~~  267 (284)
T cd07860         209 QLFRIFRTLGTPDEVVWPGVTSLPDYK-P-----SFPKW---------------ARQDFSKVVPPLDEDGRDLLSQMLHY  267 (284)
T ss_pred             HHHHHHHHhCCCChhhhhhhhHHHHHH-h-----hcccc---------------cccCHHHHcccCCHHHHHHHHHhcCC
Confidence            777777777766544332211100000 0     00000               00001111234567899999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 013678          406 DPAERLKAREALRHPFF  422 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f  422 (438)
                      ||++|||++++++||||
T Consensus       268 ~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         268 DPNKRISAKAALAHPFF  284 (284)
T ss_pred             CcccCCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=4e-44  Score=371.59  Aligned_cols=277  Identities=26%  Similarity=0.418  Sum_probs=215.1

Q ss_pred             ecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecce
Q 013678           85 AIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (438)
Q Consensus        85 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~  161 (438)
                      ..++....+|+++++||+|+||+||+|.+..+++.||+|++...   ......+..|+.++..|.|++|     ++++++
T Consensus         6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNI-----Vrl~d~   80 (1021)
T PTZ00266          6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNI-----VRYIDR   80 (1021)
T ss_pred             cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCc-----CeEEEE
Confidence            34667778999999999999999999999999999999998642   3345678889999999999887     999998


Q ss_pred             ecc--CCeEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC-------CceecCCCCCcEEEec
Q 013678          162 FDY--RNHICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHEL-------RLIHTDLKPENILLVS  229 (438)
Q Consensus       162 ~~~--~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-------~ivHrDlkp~NIli~~  229 (438)
                      |.+  ...+||||||+ +++|.++|....  ...+++..++.|+.||+.||.|||+.       +||||||||+||||+.
T Consensus        81 f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s  160 (1021)
T PTZ00266         81 FLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLST  160 (1021)
T ss_pred             EEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeec
Confidence            854  46799999999 899999997531  24699999999999999999999984       4999999999999975


Q ss_pred             CcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCC--CCCcchhHHHHH
Q 013678          230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGL--GWNYPCDLWSVG  305 (438)
Q Consensus       230 ~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG  305 (438)
                      ... .+.+....         ....+....+||+|||++......  .....||+.|+|||++.+.  .++.++||||||
T Consensus       161 ~~~-~lg~i~~~---------~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG  230 (1021)
T PTZ00266        161 GIR-HIGKITAQ---------ANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALG  230 (1021)
T ss_pred             Ccc-cccccccc---------ccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHH
Confidence            321 11111000         001123456899999999765432  2335799999999999754  488999999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhh
Q 013678          306 CILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  385 (438)
Q Consensus       306 ~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (438)
                      ||||+|++|..||...+....+.........+                                                
T Consensus       231 ~ILYELLTGk~PF~~~~~~~qli~~lk~~p~l------------------------------------------------  262 (1021)
T PTZ00266        231 CIIYELCSGKTPFHKANNFSQLISELKRGPDL------------------------------------------------  262 (1021)
T ss_pred             HHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCC------------------------------------------------
Confidence            99999999999997765544332221110000                                                


Q ss_pred             hccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       386 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                       .....+.++.+||..||+.||.+|||+.|+|.|+||+..
T Consensus       263 -pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        263 -PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             -CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence             012346689999999999999999999999999999754

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-46  Score=353.38  Aligned_cols=253  Identities=25%  Similarity=0.364  Sum_probs=216.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec----chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ..|.-++.||.|+||.||-|++..+.+.||||++.-    ......++.+|+..|.++.|||+     +.+.++|-.+..
T Consensus        26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPnt-----ieYkgCyLre~T  100 (948)
T KOG0577|consen   26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNT-----IEYKGCYLREHT  100 (948)
T ss_pred             HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCc-----ccccceeeccch
Confidence            457788999999999999999999999999999863    34556788999999999999988     999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      .|||||||-|+-.|++.-.. .++.+.++..|+.+.+.||.|||+.+.||||||..|||+++.|                
T Consensus       101 aWLVMEYClGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g----------------  163 (948)
T KOG0577|consen  101 AWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPG----------------  163 (948)
T ss_pred             HHHHHHHHhccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCC----------------
Confidence            99999999888888887554 4799999999999999999999999999999999999997766                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                 .|||+|||+|..... ..+++||++|||||++..   +.|+-++||||||++..||...++|+-..+..
T Consensus       164 -----------~VKLaDFGSAsi~~P-AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM  231 (948)
T KOG0577|consen  164 -----------LVKLADFGSASIMAP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM  231 (948)
T ss_pred             -----------eeeeccccchhhcCc-hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH
Confidence                       578888888876543 345699999999999974   45999999999999999999999998777777


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      ..+..|..--.+.                                                -...++++.+++|+..||+
T Consensus       232 SALYHIAQNesPt------------------------------------------------Lqs~eWS~~F~~Fvd~CLq  263 (948)
T KOG0577|consen  232 SALYHIAQNESPT------------------------------------------------LQSNEWSDYFRNFVDSCLQ  263 (948)
T ss_pred             HHHHHHHhcCCCC------------------------------------------------CCCchhHHHHHHHHHHHHh
Confidence            7666664421110                                                0123567899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +-|.+|||.+++|.|+|+....
T Consensus       264 KipqeRptse~ll~H~fv~R~R  285 (948)
T KOG0577|consen  264 KIPQERPTSEELLKHRFVLRER  285 (948)
T ss_pred             hCcccCCcHHHHhhcchhccCC
Confidence            9999999999999999998763

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-46  Score=331.54  Aligned_cols=252  Identities=27%  Similarity=0.441  Sum_probs=214.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      -+.|..++.||+|.||.|.+++.+.+++.||+|++++.-    ........|-++|+..+||.+     ..+.-.|+..+
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFL-----t~LKYsFQt~d  241 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFL-----TSLKYSFQTQD  241 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHH-----HHhhhhhccCc
Confidence            367889999999999999999999999999999998632    233445678899999999877     88888899999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ++|+||||. ||.|.-++.+..  .+++..++.+...|+.||.|||+++||.||||.+|.|++.+|++            
T Consensus       242 rlCFVMeyanGGeLf~HLsrer--~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHI------------  307 (516)
T KOG0690|consen  242 RLCFVMEYANGGELFFHLSRER--VFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHI------------  307 (516)
T ss_pred             eEEEEEEEccCceEeeehhhhh--cccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCce------------
Confidence            999999999 999998887754  79999999999999999999999999999999999999877755            


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcc---cCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTF---EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                     ||.|||+++.   .+....+++||+.|+|||++....|+.++|+|.+||++|||++|+.||...+
T Consensus       308 ---------------KitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d  372 (516)
T KOG0690|consen  308 ---------------KITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD  372 (516)
T ss_pred             ---------------EeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc
Confidence                           5555555443   2234456899999999999999999999999999999999999999999887


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ....+..|...--.                                                  .+..++++++.||..+
T Consensus       373 h~kLFeLIl~ed~k--------------------------------------------------FPr~ls~eAktLLsGL  402 (516)
T KOG0690|consen  373 HEKLFELILMEDLK--------------------------------------------------FPRTLSPEAKTLLSGL  402 (516)
T ss_pred             hhHHHHHHHhhhcc--------------------------------------------------CCccCCHHHHHHHHHH
Confidence            77766666433222                                                  2235678999999999


Q ss_pred             cccCCCCCC-----CHHHHhcCCCCCCCC
Q 013678          403 LRYDPAERL-----KAREALRHPFFTRDV  426 (438)
Q Consensus       403 L~~dP~~Rp-----ta~ell~hp~f~~~~  426 (438)
                      |..||.+|.     .|.||.+|+||.+..
T Consensus       403 L~kdP~kRLGgGpdDakEi~~h~FF~~v~  431 (516)
T KOG0690|consen  403 LKKDPKKRLGGGPDDAKEIMRHRFFASVD  431 (516)
T ss_pred             hhcChHhhcCCCchhHHHHHhhhhhccCC
Confidence            999999998     499999999998754

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.8e-44  Score=341.42  Aligned_cols=280  Identities=23%  Similarity=0.370  Sum_probs=215.7

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+....    ...+.+..|+.++..+.|+++     +++++.+.+++.
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~   75 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFL-----PTLYASFQTETY   75 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCc-----hhheeeeecCCE
Confidence            46899999999999999999999999999999987532    234567889999999988877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      .|+||||+ +++|.+++.......+++..++.++.||+.||+|||+.|++|+||||+||+++.++.++++|||++.....
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  155 (316)
T cd05574          76 LCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDV  155 (316)
T ss_pred             EEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence            99999999 99999999876556799999999999999999999999999999999999999999888888887654432


Q ss_pred             CCCcccCCCCCCC-----eE-EecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          247 DGSYFKNLPKSSA-----IK-LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       247 ~~~~~~~~~~~~~-----~k-l~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                      .............     .+ ...+. ...........+||..|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~  234 (316)
T cd05574         156 EPPPVSKALRKGSRRSSVNSIPSETF-SEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKG  234 (316)
T ss_pred             cccccccccccccccccccccchhhh-cccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCC
Confidence            2110000000000     00 00000 00001111235789999999999988899999999999999999999999987


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      .+....+..+......                        ++                        .....+..+.++|.
T Consensus       235 ~~~~~~~~~~~~~~~~------------------------~~------------------------~~~~~~~~~~~li~  266 (316)
T cd05574         235 SNRDETFSNILKKEVT------------------------FP------------------------GSPPVSSSARDLIR  266 (316)
T ss_pred             CchHHHHHHHhcCCcc------------------------CC------------------------CccccCHHHHHHHH
Confidence            7665544333211000                        00                        01124678999999


Q ss_pred             HccccCCCCCCC----HHHHhcCCCCCCC
Q 013678          401 GLLRYDPAERLK----AREALRHPFFTRD  425 (438)
Q Consensus       401 ~~L~~dP~~Rpt----a~ell~hp~f~~~  425 (438)
                      +||..||++|||    ++|+|+||||++.
T Consensus       267 ~~l~~~p~~R~s~~~~~~~ll~~~~~~~~  295 (316)
T cd05574         267 KLLVKDPSKRLGSKRGAAEIKQHPFFRGV  295 (316)
T ss_pred             HHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence            999999999999    9999999999875

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-46  Score=355.75  Aligned_cols=256  Identities=26%  Similarity=0.467  Sum_probs=215.9

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEee-cchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      +.|.|+..||.|+||.||+|.++.++-..|-|++. +.....++++-||+||..+.||+|     |++++.|..++.++|
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~i-----vkLl~ayy~enkLwi  106 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVI-----VKLLSAYYFENKLWI  106 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHH-----HHHHHHHhccCceEE
Confidence            55899999999999999999999999888999886 345667889999999999998887     999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      +.||| ||-...++-.-+ +.+++.++..+++|++.||.|||+++|||||||..|||++-+|                  
T Consensus       107 liEFC~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldG------------------  167 (1187)
T KOG0579|consen  107 LIEFCGGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDG------------------  167 (1187)
T ss_pred             EEeecCCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecC------------------
Confidence            99999 666666665544 6899999999999999999999999999999999999998877                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHh-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                               .++|+|||.+....   ....++.||++|||||+..     ..+|++++||||||++|.||..+.+|-...
T Consensus       168 ---------dirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel  238 (1187)
T KOG0579|consen  168 ---------DIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL  238 (1187)
T ss_pred             ---------cEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc
Confidence                     46777777664432   2345579999999999875     457999999999999999999999999887


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +....+..|.+--   |+.                                            .-.+..++..+.|||.+
T Consensus       239 npMRVllKiaKSe---PPT--------------------------------------------LlqPS~Ws~~F~DfLk~  271 (1187)
T KOG0579|consen  239 NPMRVLLKIAKSE---PPT--------------------------------------------LLQPSHWSRSFSDFLKR  271 (1187)
T ss_pred             chHHHHHHHhhcC---CCc--------------------------------------------ccCcchhhhHHHHHHHH
Confidence            7777766665421   111                                            12234567799999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          402 LLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      ||..||..||++.++|+||||++..+
T Consensus       272 cL~Knp~~Rp~aaqll~Hpfv~~~~S  297 (1187)
T KOG0579|consen  272 CLVKNPRNRPPAAQLLKHPFVQNAPS  297 (1187)
T ss_pred             HHhcCCccCCCHHHHhhCcccccCCc
Confidence            99999999999999999999997544

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=9.7e-44  Score=336.45  Aligned_cols=280  Identities=30%  Similarity=0.473  Sum_probs=215.1

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh------hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK------YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      +|++.+.||+|+||.||+|.+..+++.||||.++....      ....+..|+.+++.++|+|+     +++++++.+.+
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~   75 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNI-----IGLLDVFGHKS   75 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCC-----hhhhheeecCC
Confidence            58899999999999999999999999999999975332      23456789999999988887     99999999999


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          167 HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       167 ~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      ..++||||++++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.              
T Consensus        76 ~~~lv~e~~~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~--------------  140 (298)
T cd07841          76 NINLVFEFMETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGV--------------  140 (298)
T ss_pred             EEEEEEcccCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCC--------------
Confidence            999999999889999997653 36999999999999999999999999999999999999977664              


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                   ++|+|||++......   .....++..|+|||.+.+. .++.++|||||||++|+|++|.++|.+.+
T Consensus       141 -------------~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~  207 (298)
T cd07841         141 -------------LKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS  207 (298)
T ss_pred             -------------EEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc
Confidence                         555666655443221   1223567889999998654 57899999999999999999998998877


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      +.+.+..+....+.+....+....... .+....                     ..............+..+.+||.+|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~li~~~  265 (298)
T cd07841         208 DIDQLGKIFEALGTPTEENWPGVTSLP-DYVEFK---------------------PFPPTPLKQIFPAASDDALDLLQRL  265 (298)
T ss_pred             cHHHHHHHHHHcCCCchhhhhhccccc-cccccc---------------------ccCCcchhhhcccccHHHHHHHHHH
Confidence            777776666655544433322111000 000000                     0000001112244577899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      |++||++|||+.|+++|+||++...
T Consensus       266 l~~~P~~R~s~~e~l~~~~~~~~~~  290 (298)
T cd07841         266 LTLNPNKRITARQALEHPYFSNDPA  290 (298)
T ss_pred             hcCCcccCcCHHHHhhCccccCCCC
Confidence            9999999999999999999998644

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.4e-44  Score=340.83  Aligned_cols=254  Identities=28%  Similarity=0.481  Sum_probs=201.4

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEee---cchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ...|+++++||+||.+.||++.... .+.||+|.+.   .+......+.+|+..|.+|+..    .+||++++|-..++.
T Consensus       360 g~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~----~~IIqL~DYEv~d~~  434 (677)
T KOG0596|consen  360 GREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGH----DKIIQLYDYEVTDGY  434 (677)
T ss_pred             cchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCC----ceEEEEeeeeccCce
Confidence            3579999999999999999998644 4557777654   2445567789999999999843    567999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      +||||||-..+|...|+++.. .++.-.++.|..||+.|+.++|.+||||.||||+|+|+..                  
T Consensus       435 lYmvmE~Gd~DL~kiL~k~~~-~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk------------------  495 (677)
T KOG0596|consen  435 LYMVMECGDIDLNKILKKKKS-IDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK------------------  495 (677)
T ss_pred             EEEEeecccccHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe------------------
Confidence            999999999999999998762 3443489999999999999999999999999999999853                  


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCCcc-----cccCCCcchhHHHhCCC-----------CCcchhHHHHHHHHHHH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSY-----VVSTRHYRAPEVILGLG-----------WNYPCDLWSVGCILVEL  311 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~-----~~gt~~y~aPE~~~~~~-----------~~~~~DiwSlG~il~el  311 (438)
                                +.+||+|||+|.......+.     -+||+.||+||.+....           .+.++||||||||||+|
T Consensus       496 ----------G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqM  565 (677)
T KOG0596|consen  496 ----------GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQM  565 (677)
T ss_pred             ----------eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHH
Confidence                      47999999999877665543     48999999999997432           56889999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCc
Q 013678          312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  391 (438)
Q Consensus       312 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (438)
                      +.|+.||....  .....+..+..+-                   ..+.||+                        .+. 
T Consensus       566 vYgktPf~~~~--n~~aKl~aI~~P~-------------------~~Iefp~------------------------~~~-  599 (677)
T KOG0596|consen  566 VYGKTPFGQII--NQIAKLHAITDPN-------------------HEIEFPD------------------------IPE-  599 (677)
T ss_pred             HhcCCchHHHH--HHHHHHHhhcCCC-------------------ccccccC------------------------CCC-
Confidence            99999996432  2333333332110                   0112221                        011 


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       392 ~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      ..++.++++.||.+||.+|||+.|+|+|||++-
T Consensus       600 ~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  600 NDELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             chHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence            124899999999999999999999999999986

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=8.9e-44  Score=338.28  Aligned_cols=288  Identities=25%  Similarity=0.368  Sum_probs=208.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ++|++.++||+|+||.||++.+..++..||+|.+...  ......+.+|++++..++|+|+     +++++++..++.+|
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~   75 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYI-----VGFYGAFYSDGEIS   75 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEeeCCEEE
Confidence            3689999999999999999999999999999998643  2344667889999999998888     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      +||||+ +++|.+++....  .+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.               
T Consensus        76 lv~ey~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~---------------  138 (308)
T cd06615          76 ICMEHMDGGSLDQVLKKAG--RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGE---------------  138 (308)
T ss_pred             EEeeccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCc---------------
Confidence            999999 899999998764  68999999999999999999997 69999999999999977664               


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                                  ++|+|||++...... .....|+..|+|||++.+..++.++|||||||++|+|++|..||...+....
T Consensus       139 ------------~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~  206 (308)
T cd06615         139 ------------IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKEL  206 (308)
T ss_pred             ------------EEEccCCCcccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhH
Confidence                        566666655443221 2335788999999999888899999999999999999999999976553332


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      ...+.......+...    .       .............. ......................++.++.+||.+||..|
T Consensus       207 ~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  274 (308)
T cd06615         207 EAMFGRPVSEGEAKE----S-------HRPVSGHPPDSPRP-MAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKN  274 (308)
T ss_pred             HHhhcCccccccccC----C-------cccccCCCCCccch-hhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCC
Confidence            221211100000000    0       00000000000000 00000000000000000001125678999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 013678          407 PAERLKAREALRHPFFTRD  425 (438)
Q Consensus       407 P~~Rpta~ell~hp~f~~~  425 (438)
                      |++|||+.++++||||.+.
T Consensus       275 P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         275 PKERADLKELTKHPFIKRA  293 (308)
T ss_pred             hhhCcCHHHHhcChhhhhc
Confidence            9999999999999999874

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.8e-44  Score=330.72  Aligned_cols=249  Identities=29%  Similarity=0.419  Sum_probs=203.2

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch------hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ++|++.+.||+|++|.||+|.+..+++.||+|.+....      .....+.+|+.+++.++|+|+     +++++++.++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~   76 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERI-----VQYYGCLRDD   76 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCe-----eeeEEEEccC
Confidence            46899999999999999999999999999999986432      123467789999999988877     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+++||||+ +++|.+++....  .+++..++.++.|++.||.|||+.||+||||||+||+++.++             
T Consensus        77 ~~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~-------------  141 (263)
T cd06625          77 ETLSIFMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAG-------------  141 (263)
T ss_pred             CeEEEEEEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-------------
Confidence            9999999999 999999998764  689999999999999999999999999999999999997665             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                    .++|+|||.+.......      ....|+..|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus       142 --------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~  207 (263)
T cd06625         142 --------------NVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPW  207 (263)
T ss_pred             --------------CEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCc
Confidence                          45666666654322111      2245788999999999988999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      ...+.......+....                                                .....+...+..+.+|
T Consensus       208 ~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~~~l  239 (263)
T cd06625         208 AEFEAMAAIFKIATQP------------------------------------------------TNPQLPSHVSPDARNF  239 (263)
T ss_pred             cccchHHHHHHHhccC------------------------------------------------CCCCCCccCCHHHHHH
Confidence            7654433322221100                                                0011223456789999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCC
Q 013678          399 LQGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      |.+||..||.+|||+.++++|+||
T Consensus       240 i~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         240 LRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHHHhhcCcccCCCHHHHhhCCCC
Confidence            999999999999999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-45  Score=322.99  Aligned_cols=260  Identities=27%  Similarity=0.432  Sum_probs=209.2

Q ss_pred             ceEEE-eeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           93 RCKIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        93 ~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      -|++. +.||+|+|+.|--|....+|..||||++.+.. ..+....+|++++...+    +|+||++++++|+++..+||
T Consensus        78 ~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cq----gh~nilqLiefFEdd~~FYL  153 (463)
T KOG0607|consen   78 MYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQ----GHKNILQLIEFFEDDTRFYL  153 (463)
T ss_pred             HHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhc----CCccHHHHHHHhcccceEEE
Confidence            34444 57999999999999999999999999997654 45678889999998875    45677999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      |||-| ||+|...|.++.  .+++.++.++.++|+.||+|||.+||.||||||+|||....+.                 
T Consensus       154 VfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~-----------------  214 (463)
T KOG0607|consen  154 VFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNK-----------------  214 (463)
T ss_pred             EEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCC-----------------
Confidence            99999 999999998875  7999999999999999999999999999999999999876543                 


Q ss_pred             cccCCCCCCCeEEecCCCCcccCC----------CCcccccCCCcchhHHHhC-----CCCCcchhHHHHHHHHHHHHhC
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQ----------DHSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg  314 (438)
                             -..+|||||.+..-...          .-.+.+|+..|||||+..-     ..|+.++|.||||||||-|+.|
T Consensus       215 -------vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsG  287 (463)
T KOG0607|consen  215 -------VSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSG  287 (463)
T ss_pred             -------cCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhC
Confidence                   23577887766543221          1123589999999998752     2489999999999999999999


Q ss_pred             CCCCCCCChHH---------------HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhcc
Q 013678          315 EALFQTHENLE---------------HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR  379 (438)
Q Consensus       315 ~~pf~~~~~~~---------------~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (438)
                      .+||.+.-..+               .+..|++....+|+                                        
T Consensus       288 YpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPd----------------------------------------  327 (463)
T KOG0607|consen  288 YPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPD----------------------------------------  327 (463)
T ss_pred             CCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCCh----------------------------------------
Confidence            99998753211               22222222222221                                        


Q ss_pred             chhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       380 ~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                            ..+..+|.+.+|||..+|..|+.+|.+|.++++|||++.....
T Consensus       328 ------kdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e  370 (463)
T KOG0607|consen  328 ------KDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE  370 (463)
T ss_pred             ------hhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence                  2234568899999999999999999999999999999986544

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=2.2e-43  Score=326.51  Aligned_cols=249  Identities=24%  Similarity=0.408  Sum_probs=202.6

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc-CCeE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-RNHI  168 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-~~~~  168 (438)
                      +|++.+.||+|++|.||++.+..+++.||+|.+....   ...+.+.+|+.+++.++|+++     +++++.+.. ...+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   75 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNI-----VAYRESWEGEDGLL   75 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCe-----eeeeeeecCCCCEE
Confidence            4899999999999999999999999999999986432   334567889999999988877     999888764 4578


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |+||||+ +++|.+++.......+++..++.++.|++.||++||++||+||||||+||+++.++                
T Consensus        76 ~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~----------------  139 (257)
T cd08223          76 YIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTN----------------  139 (257)
T ss_pred             EEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCC----------------
Confidence            9999999 89999999875545689999999999999999999999999999999999997665                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                 .++|+|||++......   .....+++.|+|||++.+..++.++|||||||++|+|++|+.||...+..
T Consensus       140 -----------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~  208 (257)
T cd08223         140 -----------IIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN  208 (257)
T ss_pred             -----------cEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH
Confidence                       4566666655433211   12346788999999999988999999999999999999999999876554


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      .....+...  ..|                                               ......+.++.+||.+||+
T Consensus       209 ~~~~~~~~~--~~~-----------------------------------------------~~~~~~~~~~~~li~~~l~  239 (257)
T cd08223         209 SLVYRIIEG--KLP-----------------------------------------------PMPKDYSPELGELIATMLS  239 (257)
T ss_pred             HHHHHHHhc--CCC-----------------------------------------------CCccccCHHHHHHHHHHhc
Confidence            433332211  100                                               0112356789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCC
Q 013678          405 YDPAERLKAREALRHPFF  422 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f  422 (438)
                      .||++|||+.++++||||
T Consensus       240 ~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         240 KRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             cCcccCCCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=2.7e-43  Score=331.22  Aligned_cols=278  Identities=32%  Similarity=0.594  Sum_probs=210.6

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++....   ...+.+.+|+.+++.+.|+|+     +++++++......
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~~   75 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNL-----VNLIEVFRRKRKL   75 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCE-----eeeeeEEeeCCEE
Confidence            47999999999999999999999999999999886432   233567889999999988776     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      ++||||+ +++|..++...  ..+++..++.++.||+.||+|||++||+||||||+||+++.++                
T Consensus        76 ~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~----------------  137 (286)
T cd07847          76 HLVFEYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG----------------  137 (286)
T ss_pred             EEEEeccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCC----------------
Confidence            9999999 66666665543  3689999999999999999999999999999999999997666                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                 .++|+|||++.......   ....++..|+|||.+.+. .++.++|||||||++|+|++|..||.+.+.
T Consensus       138 -----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~  206 (286)
T cd07847         138 -----------QIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSD  206 (286)
T ss_pred             -----------cEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCCh
Confidence                       45666666655433221   123578899999998764 578999999999999999999999998888


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .+....+....+...........  ...++. .  ...+.....              ..........+..+.+||.+||
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~--~~~~~~~~~--------------~~~~~~~~~~~~~~~~li~~~l  267 (286)
T cd07847         207 VDQLYLIRKTLGDLIPRHQQIFS--TNQFFK-G--LSIPEPETR--------------EPLESKFPNISSPALSFLKGCL  267 (286)
T ss_pred             HHHHHHHHHHhCCCChHHhhhcc--cccccc-c--ccCCCcccc--------------cCHHHHhccCCHHHHHHHHHHh
Confidence            77777776666554432111000  000000 0  000000000              0001112345778999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCC
Q 013678          404 RYDPAERLKAREALRHPFF  422 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~f  422 (438)
                      +.||++|||+.|++.||||
T Consensus       268 ~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         268 QMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             cCCccccCCHHHHhcCCCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=1.2e-43  Score=335.39  Aligned_cols=253  Identities=28%  Similarity=0.427  Sum_probs=207.7

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      .+|++.+.||.|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.++|+|+     +++++++...+.+|+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~l   93 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNI-----VNFLDSFLVGDELFV   93 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCce-----eeeeeeEecCceEEE
Confidence            67999999999999999999999999999999986432 334667889999999988877     999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||+ +++|.+++...   .+++..+..++.|++.||.|||++||+||||||+||+++.++.                 
T Consensus        94 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~-----------------  153 (296)
T cd06655          94 VMEYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGS-----------------  153 (296)
T ss_pred             EEEecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC-----------------
Confidence            99999 99999998754   5899999999999999999999999999999999999976664                 


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                                ++|+|||++......   .....|+..|+|||.+.+..++.++|||||||++|+|++|..||...+....
T Consensus       154 ----------~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~  223 (296)
T cd06655         154 ----------VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA  223 (296)
T ss_pred             ----------EEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                      566666655433221   1224688899999999988899999999999999999999999987665444


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      ...+...  ..+                                             ....+..+++.+.+||.+||..|
T Consensus       224 ~~~~~~~--~~~---------------------------------------------~~~~~~~~~~~~~~li~~~l~~d  256 (296)
T cd06655         224 LYLIATN--GTP---------------------------------------------ELQNPEKLSPIFRDFLNRCLEMD  256 (296)
T ss_pred             HHHHHhc--CCc---------------------------------------------ccCCcccCCHHHHHHHHHHhhcC
Confidence            3322211  000                                             00112345678999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCC
Q 013678          407 PAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       407 P~~Rpta~ell~hp~f~~~~  426 (438)
                      |++|||+.++++||||+...
T Consensus       257 p~~Rpt~~~il~~~~~~~~~  276 (296)
T cd06655         257 VEKRGSAKELLQHPFLKLAK  276 (296)
T ss_pred             hhhCCCHHHHhhChHhhhcc
Confidence            99999999999999998743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=6.7e-44  Score=343.67  Aligned_cols=248  Identities=22%  Similarity=0.335  Sum_probs=191.8

Q ss_pred             CCceEEEeeeeeecceEEEEEEE-----CCCCcEEEEEEeecch--hhHHHHHHHHHHHHHH-HhcCCCCcceEEeccee
Q 013678           91 TPRCKILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~  162 (438)
                      .++|++.++||+|+||.||+|.+     ..+++.||||+++...  .....+.+|+.++..+ +|+||     +++++++
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni-----v~~~~~~   80 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNV-----VNLLGAC   80 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcce-----eeEEeEe
Confidence            36899999999999999999975     2445789999987432  3345688999999999 77776     9999987


Q ss_pred             ccC-CeEEEEEccC-CCCHHHHHHhcC-----------------------------------------------------
Q 013678          163 DYR-NHICIVFEKL-GPSLYDFLRKNS-----------------------------------------------------  187 (438)
Q Consensus       163 ~~~-~~~~lv~e~~-~~~L~~~l~~~~-----------------------------------------------------  187 (438)
                      ... +.+++||||+ +|+|.+++....                                                     
T Consensus        81 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (338)
T cd05102          81 TKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP  160 (338)
T ss_pred             cCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence            654 4689999999 999999997532                                                     


Q ss_pred             -------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCe
Q 013678          188 -------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI  260 (438)
Q Consensus       188 -------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~  260 (438)
                             ...+++..+..++.||+.||+|||++||+||||||+|||++.++                           .+
T Consensus       161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~---------------------------~~  213 (338)
T cd05102         161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENN---------------------------VV  213 (338)
T ss_pred             hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCC---------------------------cE
Confidence                   12477888999999999999999999999999999999997665                           45


Q ss_pred             EEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHh
Q 013678          261 KLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVL  334 (438)
Q Consensus       261 kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~  334 (438)
                      ||+|||++.......     ....++..|+|||++.+..++.++|||||||++|||++ |..||.+......+...... 
T Consensus       214 kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-  292 (338)
T cd05102         214 KICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD-  292 (338)
T ss_pred             EEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc-
Confidence            666666665432211     12345678999999999899999999999999999997 99999775433222111100 


Q ss_pred             CCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHH
Q 013678          335 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAR  414 (438)
Q Consensus       335 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~  414 (438)
                      +.                                               ....+...++++.+||.+||+.||++|||+.
T Consensus       293 ~~-----------------------------------------------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~  325 (338)
T cd05102         293 GT-----------------------------------------------RMRAPENATPEIYRIMLACWQGDPKERPTFS  325 (338)
T ss_pred             CC-----------------------------------------------CCCCCCCCCHHHHHHHHHHccCChhhCcCHH
Confidence            00                                               0011234567899999999999999999999


Q ss_pred             HHhc
Q 013678          415 EALR  418 (438)
Q Consensus       415 ell~  418 (438)
                      |+++
T Consensus       326 el~~  329 (338)
T cd05102         326 ALVE  329 (338)
T ss_pred             HHHH
Confidence            9985

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.6e-43  Score=340.75  Aligned_cols=281  Identities=28%  Similarity=0.511  Sum_probs=217.8

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC-
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~-  165 (438)
                      +..+|++.+.||+|+||.||+|.+..+++.||||.+...   ......+.+|+.+++.++|+|+     +++++++... 
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----~~~~~~~~~~~   77 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENV-----IAIKDIMPPPH   77 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCc-----cchHHheeccc
Confidence            456899999999999999999999999999999998642   2234556789999999998887     9999887643 


Q ss_pred             ----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          166 ----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       166 ----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                          ..+|+||||++++|.+++....  .+++..+..++.||+.||.|||+++++||||||+||+++.++          
T Consensus        78 ~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~----------  145 (337)
T cd07858          78 REAFNDVYIVYELMDTDLHQIIRSSQ--TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANC----------  145 (337)
T ss_pred             ccccCcEEEEEeCCCCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC----------
Confidence                3589999999889999987654  799999999999999999999999999999999999997665          


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                       .++|+|||++......   .....++..|+|||.+.+ ..++.++|||||||++|+|++|..|
T Consensus       146 -----------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p  208 (337)
T cd07858         146 -----------------DLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPL  208 (337)
T ss_pred             -----------------CEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCC
Confidence                             4566666666543222   123467889999999875 4588999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHh-hhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchh-hhhhccCCchhHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRAD-RRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN-LIMQHVDHSAGDL  395 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  395 (438)
                      |.+.+.......+....+.++...+.... .....+...                     ...... ......+.++.++
T Consensus       209 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~  267 (337)
T cd07858         209 FPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRS---------------------LPYTPRQSFARLFPHANPLA  267 (337)
T ss_pred             CCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHh---------------------cCcccccCHHHHcccCCHHH
Confidence            99888777888888887776654321100 000000000                     000000 0011223567889


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          396 IDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .+||++||+.||++|||++|+++||||...
T Consensus       268 ~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         268 IDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             HHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence            999999999999999999999999999764

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3e-43  Score=339.53  Aligned_cols=283  Identities=27%  Similarity=0.496  Sum_probs=223.4

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+.++|++++.||+|+||.||+|.+..++..||||++...   ......+.+|+.+++.++|+|+     +++++++...
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~   86 (343)
T cd07880          12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENV-----IGLLDVFTPD   86 (343)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCc-----cceeeeecCC
Confidence            3578899999999999999999999999999999998542   2234567789999999999887     9999888754


Q ss_pred             C------eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          166 N------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       166 ~------~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                      .      .+|+||||++++|.+++...   .+++..++.++.||+.||+|||++||+||||||+||+++.++        
T Consensus        87 ~~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~--------  155 (343)
T cd07880          87 LSLDRFHDFYLVMPFMGTDLGKLMKHE---KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDC--------  155 (343)
T ss_pred             ccccccceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--------
Confidence            3      46999999988999888653   599999999999999999999999999999999999996654        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                         .++|+|||++...........++..|+|||.+.+ ..++.++|||||||++|++++|..||
T Consensus       156 -------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf  216 (343)
T cd07880         156 -------------------ELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLF  216 (343)
T ss_pred             -------------------CEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence                               5777888877765554445577899999999876 35889999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhh-hhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAE-KYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      .+.+.......+....+..+..+......... .+......                   . ............+..+.+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~-~~~~~~~~~~~~~~~~~~  276 (343)
T cd07880         217 KGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPR-------------------F-RKKDFRSLLPNANPLAVN  276 (343)
T ss_pred             CCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccc-------------------c-CcchHHHhccCCChHHHH
Confidence            98888777777777777776655433321110 00000000                   0 000111223456778999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          398 LLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +|.+||+.||++|||+.++++||||+...
T Consensus       277 li~~~l~~dP~~R~t~~~~l~~~~~~~~~  305 (343)
T cd07880         277 VLEKMLVLDAESRITAAEALAHPYFEEFH  305 (343)
T ss_pred             HHHHHcCCChhhCCCHHHHhcCccHhhhc
Confidence            99999999999999999999999998753

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.5e-46  Score=322.32  Aligned_cols=297  Identities=25%  Similarity=0.442  Sum_probs=224.5

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc--
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--  164 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--  164 (438)
                      ..+.|+-+.+||+|.||.||+|+.+.+|+.||+|++--   .........+|+++|..|.|+|+     +.+++++..  
T Consensus        15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv-----~nliEic~tk~   89 (376)
T KOG0669|consen   15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENV-----VNLIEICRTKA   89 (376)
T ss_pred             cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhH-----HHHHHHHhhcc
Confidence            34678888999999999999999999999999987643   22345778999999999999988     666666542  


Q ss_pred             ------CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCc
Q 013678          165 ------RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  238 (438)
Q Consensus       165 ------~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df  238 (438)
                            ...+|+||.+|..+|..++.... ..++..++++++.+++.||.|+|...|+|||+|++|+||+.+|.+|++||
T Consensus        90 Tp~~r~r~t~ylVf~~cehDLaGlLsn~~-vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADF  168 (376)
T KOG0669|consen   90 TPTNRDRATFYLVFDFCEHDLAGLLSNRK-VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADF  168 (376)
T ss_pred             CCcccccceeeeeHHHhhhhHHHHhcCcc-ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecc
Confidence                  34699999999999999997653 57999999999999999999999999999999999999988876555555


Q ss_pred             cccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCC
Q 013678          239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       239 ~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~p  317 (438)
                      |+++.++...+.                    .....+..+-|.+|++||.+.|. .|+++.|||..|||+.||++|.+.
T Consensus       169 Glar~fs~~~n~--------------------~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspi  228 (376)
T KOG0669|consen  169 GLARAFSTSKNV--------------------VKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPI  228 (376)
T ss_pred             ccccceeccccc--------------------CCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCcc
Confidence            554332211110                    01112335679999999999986 599999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |++.++.+++..|..++|....+.|...+...-....+  ....+.+.     .+      +..+...  +-.-+++..+
T Consensus       229 mqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie--~ePl~~~~-----~r------kv~n~~k--p~~kd~~a~d  293 (376)
T KOG0669|consen  229 MQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIE--LEPLPKGQ-----KR------KVKNRLK--PYVKDDEALD  293 (376)
T ss_pred             ccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhcc--CCCCCcch-----hh------hhhhhcc--cccCChhHHH
Confidence            99999999999999999998876654443211111000  00011100     00      0111111  1112557899


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          398 LLQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      |+.+||.+||.+|++++++|+|.||..+..
T Consensus       294 Lle~ll~~DP~kR~~ad~alnh~~F~kdp~  323 (376)
T KOG0669|consen  294 LLEKLLKLDPTKRIDADQALNHDFFWKDPM  323 (376)
T ss_pred             HHHHHhccCcccCcchHhhhchhhhhcCCc
Confidence            999999999999999999999999988754

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=3.2e-43  Score=325.21  Aligned_cols=249  Identities=26%  Similarity=0.409  Sum_probs=205.7

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      .|.+.+.||+|++|.||+|.+..+++.|++|.+...   ......+.+|+.+++.++|+|+     +++++++...+..|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~   75 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYI-----IRYYESFLDKGKLN   75 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCe-----ehheeeeccCCEEE
Confidence            478899999999999999999999999999998642   3455677889999999988887     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++.                
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~----------------  139 (256)
T cd08529          76 IVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDN----------------  139 (256)
T ss_pred             EEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCC----------------
Confidence            999999 999999998764457999999999999999999999999999999999999977664                


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                 ++|+|||++.......   ....|+..|+|||++.+..++.++|||||||++|+|++|..||...+...
T Consensus       140 -----------~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  208 (256)
T cd08529         140 -----------VKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA  208 (256)
T ss_pred             -----------EEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                       5666666554432221   22467889999999999889999999999999999999999998776544


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+.+.  ..+                                               .....++.++.++|.+||+.
T Consensus       209 ~~~~~~~~--~~~-----------------------------------------------~~~~~~~~~~~~~i~~~l~~  239 (256)
T cd08529         209 LILKIIRG--VFP-----------------------------------------------PVSQMYSQQLAQLIDQCLTK  239 (256)
T ss_pred             HHHHHHcC--CCC-----------------------------------------------CCccccCHHHHHHHHHHccC
Confidence            33332211  000                                               01113466899999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 013678          406 DPAERLKAREALRHPFF  422 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f  422 (438)
                      +|++||++.++++|||+
T Consensus       240 ~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         240 DYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             CcccCcCHHHHhhCCCC
Confidence            99999999999999996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.1e-43  Score=340.69  Aligned_cols=285  Identities=27%  Similarity=0.507  Sum_probs=224.2

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+.++|++.+.||+|+||.||+|++..+++.||+|++...   ......+.+|+.+++.+.|+|+     +++++++...
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~   86 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENV-----IGLLDVFTPA   86 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCH-----HHHHHHhhcc
Confidence            3567899999999999999999999999999999998642   2334567789999999998887     8888877655


Q ss_pred             Ce------EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          166 NH------ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       166 ~~------~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                      +.      .++|+||++++|.+++...   .+++..+..++.||+.||.|||++||+||||||+||+++.++        
T Consensus        87 ~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~--------  155 (343)
T cd07851          87 SSLEDFQDVYLVTHLMGADLNNIVKCQ---KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC--------  155 (343)
T ss_pred             ccccccccEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--------
Confidence            44      9999999999999998753   599999999999999999999999999999999999997655        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                         .++|+|||.+...........++..|+|||.+.+. .++.++|||||||++|+|++|..||
T Consensus       156 -------------------~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf  216 (343)
T cd07851         156 -------------------ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLF  216 (343)
T ss_pred             -------------------CEEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence                               56777777776655444455788899999998764 5789999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccch-hhhhhccCCchhHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP-NLIMQHVDHSAGDLID  397 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~  397 (438)
                      .+.+....+..+....+.+++.+..+........+..                    ...... ..........+..+.+
T Consensus       217 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~s~~l~d  276 (343)
T cd07851         217 PGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQ--------------------SLPQMPKKDFKEVFSGANPLAID  276 (343)
T ss_pred             CCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHH--------------------hccccCCCCHHHHhccCCHHHHH
Confidence            9888888888888887777766544332111000000                    000000 0001112234778999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          398 LLQGLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      ||.+||+.||++|||+.||++||||.+....
T Consensus       277 li~~~l~~~P~~Rpt~~ell~h~~~~~~~~~  307 (343)
T cd07851         277 LLEKMLVLDPDKRITAAEALAHPYLAEYHDP  307 (343)
T ss_pred             HHHHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence            9999999999999999999999999875443

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1.2e-43  Score=333.19  Aligned_cols=252  Identities=25%  Similarity=0.442  Sum_probs=202.1

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceec------
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD------  163 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~------  163 (438)
                      .++|++.+.||.|+||.||+|.+..+++.||+|++.........+..|+.++.++ .|+|+     +++++++.      
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----~~~~~~~~~~~~~~   89 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNI-----ATYYGAFIKKSPPG   89 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcE-----EEEeeehhcccccC
Confidence            4678999999999999999999999999999999876655566778899999988 46655     99999885      


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      ....+|+||||+ +++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++           
T Consensus        90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~-----------  158 (282)
T cd06636          90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENA-----------  158 (282)
T ss_pred             CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-----------
Confidence            346899999999 88999999875555789999999999999999999999999999999999997655           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHh-----CCCCCcchhHHHHHHHHHHHHhC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg  314 (438)
                                      .++|+|||.+.....   ......|+..|+|||++.     +..++.++|||||||++|+|++|
T Consensus       159 ----------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g  222 (282)
T cd06636         159 ----------------EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEG  222 (282)
T ss_pred             ----------------CEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhC
Confidence                            467777776654322   122357899999999986     34578899999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      ..||...........+...   .+.                                             ......++.+
T Consensus       223 ~~p~~~~~~~~~~~~~~~~---~~~---------------------------------------------~~~~~~~~~~  254 (282)
T cd06636         223 APPLCDMHPMRALFLIPRN---PPP---------------------------------------------KLKSKKWSKK  254 (282)
T ss_pred             CCCccccCHHhhhhhHhhC---CCC---------------------------------------------CCcccccCHH
Confidence            9999765443322221110   000                                             0001235678


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCC
Q 013678          395 LIDLLQGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      +.+||.+||+.||.+|||+.|+++||||
T Consensus       255 ~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         255 FIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             HHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            9999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=3.5e-43  Score=332.04  Aligned_cols=284  Identities=30%  Similarity=0.482  Sum_probs=219.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ++|++.+.||+|++|.||+|.+..+++.||+|.+....   ...+.+.+|+.+++.++|+|+     +++++++.+....
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~   76 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI-----VRLQDVVHSEKRL   76 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCE-----eeEEEEEecCCeE
Confidence            57999999999999999999999999999999986432   233567789999999988877     9999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      |+||||++++|.+++.......+++..++.++.||+.||+|||++||+||||||+||+++..+                 
T Consensus        77 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~-----------------  139 (294)
T PLN00009         77 YLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRT-----------------  139 (294)
T ss_pred             EEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCC-----------------
Confidence            999999977999988765544578899999999999999999999999999999999997432                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                               ..+||+|||.+.......   ....++..|+|||.+.+. .++.++|||||||++|+|++|..||...+..
T Consensus       140 ---------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~  210 (294)
T PLN00009        140 ---------NALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI  210 (294)
T ss_pred             ---------CEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                     246778888776433221   224678899999998764 5789999999999999999999999888777


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +.+..+....+.+....+........ +...  ...|                  ............++.+.++|.+||+
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~------------------~~~~~~~~~~~~~~~~~~~i~~~l~  269 (294)
T PLN00009        211 DELFKIFRILGTPNEETWPGVTSLPD-YKSA--FPKW------------------PPKDLATVVPTLEPAGVDLLSKMLR  269 (294)
T ss_pred             HHHHHHHHHhCCCChhhccccccchh-hhhh--cccC------------------CCCCHHHhCcCCChHHHHHHHHHcc
Confidence            77777766666554433221110000 0000  0000                  0001111234567789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      .||++||++.++++||||.+...
T Consensus       270 ~~P~~Rps~~~~l~~~~~~~~~~  292 (294)
T PLN00009        270 LDPSKRITARAALEHEYFKDLGD  292 (294)
T ss_pred             CChhhCcCHHHHhcCchHhHHhc
Confidence            99999999999999999987544

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=2.6e-43  Score=333.20  Aligned_cols=255  Identities=27%  Similarity=0.416  Sum_probs=207.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ..+|++.+.||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.+.|+|+     +++++.+..+.+.|
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v-----~~~~~~~~~~~~~~   93 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI-----VNYLDSYLVGDELW   93 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCE-----eeEEEEEEeCCEEE
Confidence            368999999999999999999999999999999987533 334667889999999988776     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++...   .+++..+..++.|++.||.|||++||+||||||+||+++.++                 
T Consensus        94 lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~-----------------  153 (296)
T cd06654          94 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-----------------  153 (296)
T ss_pred             EeecccCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC-----------------
Confidence            999999 99999998653   489999999999999999999999999999999999997655                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                .++|+|||.+......   .....|+..|+|||.+.+..++.++|||||||++|+|++|..||...+...
T Consensus       154 ----------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~  223 (296)
T cd06654         154 ----------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR  223 (296)
T ss_pred             ----------CEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                      4566666665543221   123468899999999998889999999999999999999999997765533


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+... +. +                                             .......++..+.+||.+||..
T Consensus       224 ~~~~~~~~-~~-~---------------------------------------------~~~~~~~~~~~l~~li~~~l~~  256 (296)
T cd06654         224 ALYLIATN-GT-P---------------------------------------------ELQNPEKLSAIFRDFLNRCLDM  256 (296)
T ss_pred             hHHHHhcC-CC-C---------------------------------------------CCCCccccCHHHHHHHHHHCcC
Confidence            32221110 00 0                                             0011223456889999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      ||++|||+.++++||||.....
T Consensus       257 ~p~~Rpt~~eil~~~~~~~~~~  278 (296)
T cd06654         257 DVEKRGSAKELLQHQFLKIAKP  278 (296)
T ss_pred             CcccCcCHHHHhhChhhhccCC
Confidence            9999999999999999987643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=1.6e-43  Score=340.41  Aligned_cols=286  Identities=26%  Similarity=0.496  Sum_probs=221.5

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc--
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--  164 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--  164 (438)
                      +..+|++.+.||+|+||.||+|.+..+++.||+|++....   .....+.+|+.+++.++|+++     +++++++..  
T Consensus         3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~   77 (334)
T cd07855           3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNI-----IAIRDILRPPG   77 (334)
T ss_pred             hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCc-----cCHHHhccccC
Confidence            3478999999999999999999999999999999986532   234567789999999998887     998888763  


Q ss_pred             --CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          165 --RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       165 --~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                        ...+|+||||++++|.+++....  .+++..++.++.||+.||.|||++||+||||||+||+++.++.          
T Consensus        78 ~~~~~~~lv~e~~~~~l~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~----------  145 (334)
T cd07855          78 ADFKDVYVVMDLMESDLHHIIHSDQ--PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCE----------  145 (334)
T ss_pred             CCCceEEEEEehhhhhHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCc----------
Confidence              35799999999779999987654  6999999999999999999999999999999999999977664          


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCC-------CcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg  314 (438)
                                       +||+|||++......       .....|+..|+|||.+.+ ..++.++|||||||++|+|++|
T Consensus       146 -----------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g  208 (334)
T cd07855         146 -----------------LRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGR  208 (334)
T ss_pred             -----------------EEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcC
Confidence                             555555555432111       122478889999999876 4588999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhh-hhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchh
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRA-EKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  393 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (438)
                      +.||.+.+....+..+....|.+|........... ..+...     ++.               .............+.
T Consensus       209 ~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~---------------~~~~~~~~~~~~~~~  268 (334)
T cd07855         209 RQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQN-----LPR---------------KQPVPWSKIFPKASP  268 (334)
T ss_pred             CCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhh-----ccc---------------CCCCCHHHHcccCCH
Confidence            99999988888888888888888776544322110 001000     000               000000111234578


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      ++.++|++||+.||++|||+.+++.||||.+.....
T Consensus       269 ~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~  304 (334)
T cd07855         269 EALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPD  304 (334)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCc
Confidence            899999999999999999999999999998755443

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=3.9e-43  Score=334.02  Aligned_cols=286  Identities=27%  Similarity=0.498  Sum_probs=210.9

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC---
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR---  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~---  165 (438)
                      ++|++.++||+|+||.||+|.+..+++.||||.+....   .....+.+|+.+++.+.|+++     +++++++...   
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~   86 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENV-----VNLIEICRTKATP   86 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCc-----cceEEEEeccccc
Confidence            57999999999999999999999999999999886432   223455689999999999888     8888876543   


Q ss_pred             -----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          166 -----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       166 -----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                           ...++||||++++|.+++.... ..+++..++.++.||+.||+|||++||+|+||||+||+++.++.++|+|||+
T Consensus        87 ~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~  165 (310)
T cd07865          87 YNRYKGSFYLVFEFCEHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGL  165 (310)
T ss_pred             ccCCCceEEEEEcCCCcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCC
Confidence                 3569999999889998887643 3689999999999999999999999999999999999998776554444444


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                      +.........                    .........++..|+|||.+.+.. ++.++||||||+++|+|++|..||.
T Consensus       166 ~~~~~~~~~~--------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~  225 (310)
T cd07865         166 ARAFSLSKNS--------------------KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQ  225 (310)
T ss_pred             cccccCCccc--------------------CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCC
Confidence            3322111000                    000111235788899999987654 7889999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhh-ccCCchhHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ-HVDHSAGDLIDL  398 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l  398 (438)
                      +.+.......+....+.+|..+.........  +.   ....+....     .         ..... .....+..+.+|
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~-----~---------~~~~~l~~~~~~~~~~dl  286 (310)
T cd07865         226 GNTEQHQLTLISQLCGSITPEVWPGVDKLEL--FK---KMELPQGQK-----R---------KVKERLKPYVKDPHALDL  286 (310)
T ss_pred             CCCHHHHHHHHHHHhCCCChhhcccccchhh--hh---hccCCCccc-----h---------hhHHhcccccCCHHHHHH
Confidence            9888888888888888877654332211000  00   000000000     0         00000 011235678899


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCC
Q 013678          399 LQGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      |.+||..||.+|||++|+|+||||
T Consensus       287 i~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         287 IDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             HHHHhcCChhhccCHHHHhcCCCC
Confidence            999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=9.9e-44  Score=335.58  Aligned_cols=279  Identities=29%  Similarity=0.481  Sum_probs=214.9

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC--C
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--N  166 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~--~  166 (438)
                      ++|++.+.||.|+||.||+|.+..+++.||+|.++...   .....+.+|+.++..+.|+|+     +++++++...  +
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----~~~~~~~~~~~~~   79 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNI-----VTVKEVVVGSNLD   79 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCE-----EEEEEEEEecCCC
Confidence            57899999999999999999999999999999987432   223356789999999988877     9999988776  8


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          167 HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       167 ~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      ..|+||||++++|.+++.... ..+++..++.++.||+.||+|||++||+|+||||+||+++.++               
T Consensus        80 ~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~---------------  143 (293)
T cd07843          80 KIYMVMEYVEHDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRG---------------  143 (293)
T ss_pred             cEEEEehhcCcCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC---------------
Confidence            999999999779999987654 3689999999999999999999999999999999999997665               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                  .++|+|||.+......   .....++..|+|||.+.+.. ++.++|||||||++|+|++|..||...+
T Consensus       144 ------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~  211 (293)
T cd07843         144 ------------ILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKS  211 (293)
T ss_pred             ------------cEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                        4666666666543332   12245788999999987654 6899999999999999999999999888


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC-chhHHHHHHHH
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH-SAGDLIDLLQG  401 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ll~~  401 (438)
                      ..+....+....+.++...+........     .....+..              ............. +++.+.+||++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~li~~  272 (293)
T cd07843         212 EIDQLNKIFKLLGTPTEKIWPGFSELPG-----AKKKTFTK--------------YPYNQLRKKFPALSLSDNGFDLLNR  272 (293)
T ss_pred             hHHHHHHHHHHhCCCchHHHHHhhccch-----hccccccc--------------ccchhhhccccccCCChHHHHHHHH
Confidence            8888887777777665544332211000     00000000              0000111111111 47789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCC
Q 013678          402 LLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f  422 (438)
                      ||+.||++|||+.|+|+||||
T Consensus       273 ~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         273 LLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             HhccCccccCCHHHHhcCCCC
Confidence            999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=4.2e-43  Score=329.19  Aligned_cols=274  Identities=33%  Similarity=0.557  Sum_probs=213.1

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHH-hcCCCCcceEEecceeccC--CeE
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYR--NHI  168 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~--~~~  168 (438)
                      |+++++||+|+||.||+|.+..+++.||+|+++...  .......+|+.++.++. |+|+     +++++++.++  +.+
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i-----~~~~~~~~~~~~~~~   75 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNI-----LRLIEVLFDRKTGRL   75 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCc-----cceEEEEecCCCCcE
Confidence            678999999999999999999999999999987532  22233457888888885 6666     9999999887  899


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      ++||||+.++|.+.+.... ..+++..+..++.||+.||+|||++||+||||||+||+++. +                 
T Consensus        76 ~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~-----------------  136 (282)
T cd07831          76 ALVFELMDMNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-D-----------------  136 (282)
T ss_pred             EEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-C-----------------
Confidence            9999999779998887643 46899999999999999999999999999999999999965 4                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                .++|+|||.+.......  ....++..|+|||.+.. ..++.++|||||||++|||++|..||.+.+..+
T Consensus       137 ----------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~  206 (282)
T cd07831         137 ----------ILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD  206 (282)
T ss_pred             ----------CeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH
Confidence                      56777777766543222  22467889999998765 457899999999999999999999999988888


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..+....+..+..+.......      ......++...               ...........+.++.+||.+||+.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~li~~~l~~  265 (282)
T cd07831         207 QIAKIHDVLGTPDAEVLKKFRKS------RHMNYNFPSKK---------------GTGLRKLLPNASAEGLDLLKKLLAY  265 (282)
T ss_pred             HHHHHHHHcCCCCHHHHHhhccc------ccccccCcccc---------------cccHHHHcccccHHHHHHHHHHhcc
Confidence            88888888887776552211100      00011111100               0001112234578999999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 013678          406 DPAERLKAREALRHPFF  422 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f  422 (438)
                      ||++|||++++++||||
T Consensus       266 ~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         266 DPDERITAKQALRHPYF  282 (282)
T ss_pred             CcccccCHHHHhhCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=5.1e-43  Score=330.98  Aligned_cols=277  Identities=33%  Similarity=0.535  Sum_probs=209.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh---hHHHHHHHHHHHHHHHh-cCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLAR-HDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~-~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++.+.||+|+||.||+|.+..+++.||||+++....   ....+.+|+.+++.+.| +|+     +++++++.....
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i-----~~~~~~~~~~~~   75 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYI-----VRLLDVEHVEEK   75 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCc-----cceeeeEeecCC
Confidence            468999999999999999999999999999998864322   23567889999999965 565     999988876554


Q ss_pred             -----EEEEEccCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec-CcccccCCc
Q 013678          168 -----ICIVFEKLGPSLYDFLRKNS---YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDY  238 (438)
Q Consensus       168 -----~~lv~e~~~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~-~~~~kl~df  238 (438)
                           .|+||||+.++|.+++....   ...+++..++.++.||+.||.|||++||+||||||+||+++. ++       
T Consensus        76 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~-------  148 (295)
T cd07837          76 NGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKG-------  148 (295)
T ss_pred             CCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCC-------
Confidence                 89999999769999887542   236899999999999999999999999999999999999976 44       


Q ss_pred             cccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhC
Q 013678          239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       239 ~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg  314 (438)
                                          .++|+|||.+......   .....+++.|+|||++.+. .++.++|||||||++|+|++|
T Consensus       149 --------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g  208 (295)
T cd07837         149 --------------------LLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRK  208 (295)
T ss_pred             --------------------eEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcC
Confidence                                5677777766543221   1123568889999998764 578999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhcc-chhhhhhccCCchh
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR-LPNLIMQHVDHSAG  393 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  393 (438)
                      ..||.+.+.......+.+..+..+...+.....                   ...    ...... .+.......+..+.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~----~~~~~~~~~~~~~~~~~~~~~  265 (295)
T cd07837         209 QPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSK-------------------LRD----WHEFPQWKPQDLSRAVPDLSP  265 (295)
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCChhhCcchhh-------------------ccc----hhhcCcccchhHHHhccccCH
Confidence            999998888777777666555443322111000                   000    000000 00111112235678


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALRHPFFT  423 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~hp~f~  423 (438)
                      ++.+||.+||+.||++|||+.|++.||||+
T Consensus       266 ~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         266 EGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             HHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence            899999999999999999999999999995

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=1.2e-43  Score=333.22  Aligned_cols=259  Identities=27%  Similarity=0.469  Sum_probs=207.5

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      -|++.+.||+|+||.||+|.+..++..+++|.+... ....+.+.+|+.+++.+.|+|+     +++++++...+..++|
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----i~~~~~~~~~~~~~~v   80 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI-----VKLLDAFYYENNLWIL   80 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCe-----eeEEEEEeeCCEEEEE
Confidence            368899999999999999999999999999998653 3345667889999999988877     9999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||+ +++|..++.... ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.                  
T Consensus        81 ~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~------------------  141 (282)
T cd06643          81 IEFCAGGAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGD------------------  141 (282)
T ss_pred             EEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCC------------------
Confidence            9999 889988876533 46899999999999999999999999999999999999976664                  


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHh-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                               ++|+|||++......   .....++..|+|||++.     +..++.++|||||||++|+|++|..||...+
T Consensus       142 ---------~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~  212 (282)
T cd06643         142 ---------IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN  212 (282)
T ss_pred             ---------EEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC
Confidence                     555666655432211   12346889999999984     3457789999999999999999999998766


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ..+....+......                                               ....+..++.++.+||.+|
T Consensus       213 ~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~li~~~  245 (282)
T cd06643         213 PMRVLLKIAKSEPP-----------------------------------------------TLAQPSRWSSEFKDFLKKC  245 (282)
T ss_pred             HHHHHHHHhhcCCC-----------------------------------------------CCCCccccCHHHHHHHHHH
Confidence            55444333221100                                               0011123466899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCCCcee
Q 013678          403 LRYDPAERLKAREALRHPFFTRDVRRPTL  431 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~~~~~~~  431 (438)
                      |+.||.+|||+.++++||||+.....+..
T Consensus       246 l~~~p~~Rp~~~~il~~~~~~~~~~~~~~  274 (282)
T cd06643         246 LEKNVDARWTTTQLLQHPFVTVNSNKPIR  274 (282)
T ss_pred             ccCChhhCcCHHHHhcCCCEeccCCCCHH
Confidence            99999999999999999999987766543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=7e-43  Score=333.26  Aligned_cols=287  Identities=29%  Similarity=0.487  Sum_probs=210.4

Q ss_pred             ceEEEeeeeeecceEEEEEEECC--CCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC-
Q 013678           93 RCKILSKMGEGTFGQVVECFDNE--KKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-  165 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~-  165 (438)
                      +|++.++||+|+||.||+|.+..  +++.||+|.+....    ...+...+|+.++..++|+|+     +++++++.+. 
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   75 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENV-----VSLVEVFLEHA   75 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCc-----cceEEEEeCCC
Confidence            58999999999999999999988  89999999987532    334567889999999998887     9999999887 


Q ss_pred             -CeEEEEEccCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          166 -NHICIVFEKLGPSLYDFLRKNS---YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       166 -~~~~lv~e~~~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                       ..+|+||||++++|.+++....   ...+++..++.++.||+.||.|||+++|+||||||+||+++.++          
T Consensus        76 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~----------  145 (316)
T cd07842          76 DKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEG----------  145 (316)
T ss_pred             CceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCC----------
Confidence             8899999999878888875432   13689999999999999999999999999999999999998732          


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg  314 (438)
                                   +.+..+||+|||++.......      ....++..|+|||++.+. .++.++|||||||++|+|++|
T Consensus       146 -------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~  212 (316)
T cd07842         146 -------------PERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTL  212 (316)
T ss_pred             -------------CccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhc
Confidence                         124457777777766543221      224678899999998774 578999999999999999999


Q ss_pred             CCCCCCCChH---------HHHHHHHHHhCCCChHHHHHHhhhhhhhh--cCCCcccCCCCCCChhhHHHHHHhccchhh
Q 013678          315 EALFQTHENL---------EHLAMMERVLGPLPHHMVIRADRRAEKYF--RRGARLDWPDGATSRDSMRAVWKLLRLPNL  383 (438)
Q Consensus       315 ~~pf~~~~~~---------~~~~~i~~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (438)
                      ..||.+....         ..+..+...++..+...+...........  .......++.     ....          .
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----------~  277 (316)
T cd07842         213 EPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPS-----NSLA----------K  277 (316)
T ss_pred             CCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCC-----ccHH----------H
Confidence            9999765432         23444555555444333221111100000  0000000000     0000          0


Q ss_pred             hhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q 013678          384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       384 ~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      ........+..+.++|.+||+.||++|||+.|+++||||
T Consensus       278 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         278 WMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             HHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            001112556789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=7.6e-43  Score=337.03  Aligned_cols=286  Identities=26%  Similarity=0.500  Sum_probs=222.2

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++....   ...+.+.+|+.+++.++|+||     +++++++...
T Consensus        14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i-----v~~~~~~~~~   88 (345)
T cd07877          14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV-----IGLLDVFTPA   88 (345)
T ss_pred             hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcc-----cceeeeeeec
Confidence            45689999999999999999999999999999999986432   234567789999999999887     8888877532


Q ss_pred             ------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          166 ------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       166 ------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                            ...|+++++++++|.+++...   .+++..++.++.||+.||+|||++||+||||||+||+++.++        
T Consensus        89 ~~~~~~~~~~lv~~~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--------  157 (345)
T cd07877          89 RSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--------  157 (345)
T ss_pred             ccccccccEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCC--------
Confidence                  458999999999999888653   589999999999999999999999999999999999997655        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                         .++|+|||++...........++..|+|||.+.+ ..++.++|||||||++|+|++|+.||
T Consensus       158 -------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf  218 (345)
T cd07877         158 -------------------ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF  218 (345)
T ss_pred             -------------------CEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                               5677777777665544445578899999999876 46889999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhh-hhhhcCCCcccCCCCCCChhhHHHHHHhccchhh-hhhccCCchhHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRA-EKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL-IMQHVDHSAGDLI  396 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~  396 (438)
                      ...+....+..+.+..+..+..+........ +.+...                  .   ...+.. ........++++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~---~~~~~~~~~~~~~~~~~~~~  277 (345)
T cd07877         219 PGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS------------------L---TQMPKMNFANVFIGANPLAV  277 (345)
T ss_pred             CCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHH------------------h---cccCCcchhhhcCCCCHHHH
Confidence            8888777777787777766665543221110 000000                  0   000000 0011123567899


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCCCCCce
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT  430 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~~~  430 (438)
                      +||.+||+.||.+|+|+.++++||||++-.....
T Consensus       278 ~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~~  311 (345)
T cd07877         278 DLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDD  311 (345)
T ss_pred             HHHHHHcCCChhhcCCHHHHhcChhhhhcCCCCc
Confidence            9999999999999999999999999997554433

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=1.5e-43  Score=334.91  Aligned_cols=260  Identities=27%  Similarity=0.414  Sum_probs=208.4

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ...+|++++.||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.++|+|+     +++++++..++..
T Consensus        17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~~   91 (297)
T cd06656          17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNI-----VNYLDSYLVGDEL   91 (297)
T ss_pred             hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCE-----eeEEEEEecCCEE
Confidence            3478999999999999999999999999999999986533 334567789999999888877     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |+||||+ +++|.+++.+.   .+++..+..++.|++.||.|||+.||+||||||+|||++.++.               
T Consensus        92 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~---------------  153 (297)
T cd06656          92 WVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGS---------------  153 (297)
T ss_pred             EEeecccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC---------------
Confidence            9999999 99999998764   5899999999999999999999999999999999999976664               


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                  ++|+|||.+......   .....++..|+|||.+.+..++.++|||||||++|++++|..||...+..
T Consensus       154 ------------~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~  221 (297)
T cd06656         154 ------------VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL  221 (297)
T ss_pred             ------------EEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc
Confidence                        566666655433221   12346788999999999888999999999999999999999999765443


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      .....+.. .+ .|                                             ........+..+.+||.+||.
T Consensus       222 ~~~~~~~~-~~-~~---------------------------------------------~~~~~~~~~~~~~~li~~~l~  254 (297)
T cd06656         222 RALYLIAT-NG-TP---------------------------------------------ELQNPERLSAVFRDFLNRCLE  254 (297)
T ss_pred             hheeeecc-CC-CC---------------------------------------------CCCCccccCHHHHHHHHHHcc
Confidence            22211110 00 00                                             001122346678999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCCCCcee
Q 013678          405 YDPAERLKAREALRHPFFTRDVRRPTL  431 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~~~~~~~  431 (438)
                      .||++|||+.++++||||.....-+.+
T Consensus       255 ~~p~~Rps~~~il~~~~~~~~~~~~~~  281 (297)
T cd06656         255 MDVDRRGSAKELLQHPFLKLAKPLSSL  281 (297)
T ss_pred             CChhhCcCHHHHhcCchhccccccccc
Confidence            999999999999999999876554443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=3.7e-43  Score=330.61  Aligned_cols=280  Identities=33%  Similarity=0.631  Sum_probs=216.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ++|++.+.||+|+||.||+|.+..+++.||+|+++..   ....+.+.+|+.+++.+.|+|+     +++++++..++..
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~   75 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENI-----VNLKEAFRRKGRL   75 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCe-----eehhheEEECCEE
Confidence            4799999999999999999999999999999988643   2345678899999999998877     9999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      ++||||+++++.+.+.... ..+++..+..++.||+.||.|||++||+|+||+|+||+++.++                 
T Consensus        76 ~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~-----------------  137 (288)
T cd07833          76 YLVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESG-----------------  137 (288)
T ss_pred             EEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC-----------------
Confidence            9999999445444443332 3689999999999999999999999999999999999997655                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                .++|+|||.+.......    ....++..|+|||++.+. .++.++||||||+++|+|++|..||.+.+.
T Consensus       138 ----------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~  207 (288)
T cd07833         138 ----------VLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSD  207 (288)
T ss_pred             ----------CEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence                      46666776665433322    234678899999999888 789999999999999999999999998888


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .+.+..+....+.++............  +.   ...++....             ...........++.++.+||++||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~li~~~l  269 (288)
T cd07833         208 IDQLYLIQKCLGPLPPSHQELFSSNPR--FA---GVAFPEPSQ-------------PESLERRYPGKVSSPALDFLKACL  269 (288)
T ss_pred             HHHHHHHHHHhCCCCHHHhhhcccCcc--cc---ccccCCCCC-------------cHHHHHhcCCccchHHHHHHHHHh
Confidence            888888888887777644322110000  00   000000000             000011122334788999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCC
Q 013678          404 RYDPAERLKAREALRHPFF  422 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~f  422 (438)
                      ..||++|||++++++||||
T Consensus       270 ~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         270 RMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             ccCchhcccHHHHhcCCCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-45  Score=342.44  Aligned_cols=259  Identities=28%  Similarity=0.452  Sum_probs=217.4

Q ss_pred             cCCceEEE--eeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           90 LTPRCKIL--SKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        90 ~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      +..-|+|.  +.||+|.||+||-|+++.+|+.||||++.+.   .+......+|+.||+.+.||.|     |.+.-.|+.
T Consensus       560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGi-----V~le~M~ET  634 (888)
T KOG4236|consen  560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGI-----VNLECMFET  634 (888)
T ss_pred             HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCe-----eEEEEeecC
Confidence            33446654  7899999999999999999999999999753   3455778899999999999988     999999999


Q ss_pred             CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          165 RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       165 ~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      .+.+++|||-+.|++.+.|-......+++...+.++.||+.||.|||-+||+|+||||+|||+.+.              
T Consensus       635 ~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~--------------  700 (888)
T KOG4236|consen  635 PERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASA--------------  700 (888)
T ss_pred             CceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccC--------------
Confidence            999999999997777666655444689999999999999999999999999999999999999653              


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                +...++||||||+|++.++.  ..+.+||+.|+|||++.+..|+..-|+||.|||+|.-+.|..||....
T Consensus       701 ----------~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE  770 (888)
T KOG4236|consen  701 ----------SPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE  770 (888)
T ss_pred             ----------CCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc
Confidence                      34568999999999997754  355799999999999999999999999999999999999999997654


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      +.  ..+|+..---.|                                              ...+.+++.++.|||..+
T Consensus       771 dI--ndQIQNAaFMyP----------------------------------------------p~PW~eis~~AidlIn~L  802 (888)
T KOG4236|consen  771 DI--NDQIQNAAFMYP----------------------------------------------PNPWSEISPEAIDLINNL  802 (888)
T ss_pred             ch--hHHhhccccccC----------------------------------------------CCchhhcCHHHHHHHHHH
Confidence            43  233332111111                                              112346788999999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      |+..-.+|.|.+..|.|||+++-
T Consensus       803 LqVkm~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  803 LQVKMRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             HHHHHHHhcchHhhccchhhhcc
Confidence            99999999999999999999874

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-43  Score=332.31  Aligned_cols=256  Identities=29%  Similarity=0.474  Sum_probs=207.0

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      ++|+++++||.|+||.||++.+..++..||+|++.... ...+.+.+|+.+++.++|+++     +++++++..+...|+
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~l   79 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNI-----VGLYEAYFYENKLWI   79 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCce-----eEEEEEEecCCeEEE
Confidence            57899999999999999999998899999999987533 344567889999999988877     999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||+ +++|.+++.... ..+++..++.++.|++.||.|||++||+|+||||+||+++.++                  
T Consensus        80 v~e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~------------------  140 (280)
T cd06611          80 LIEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDG------------------  140 (280)
T ss_pred             EeeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCC------------------
Confidence            99999 899999987643 4699999999999999999999999999999999999997665                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                               .++|+|||.+......   .....|+..|+|||++..     ..++.++|||||||++|+|++|..||...
T Consensus       141 ---------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~  211 (280)
T cd06611         141 ---------DVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHEL  211 (280)
T ss_pred             ---------CEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccC
Confidence                     4666666655433221   223468899999999863     34678999999999999999999999876


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +.......+...  ..|                                             .......++.++.+||.+
T Consensus       212 ~~~~~~~~~~~~--~~~---------------------------------------------~~~~~~~~~~~~~~li~~  244 (280)
T cd06611         212 NPMRVLLKILKS--EPP---------------------------------------------TLDQPSKWSSSFNDFLKS  244 (280)
T ss_pred             CHHHHHHHHhcC--CCC---------------------------------------------CcCCcccCCHHHHHHHHH
Confidence            554433332211  000                                             001122346689999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          402 LLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      ||+.||.+|||+.++++||||.+...
T Consensus       245 ~l~~~p~~Rps~~~il~~~~~~~~~~  270 (280)
T cd06611         245 CLVKDPDDRPTAAELLKHPFVSDQSD  270 (280)
T ss_pred             HhccChhhCcCHHHHhcChhhcccch
Confidence            99999999999999999999998643

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=4.9e-43  Score=324.10  Aligned_cols=249  Identities=27%  Similarity=0.454  Sum_probs=206.4

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +|++.+.||+|+||.||++.+..+++.||+|.+...   ......+.+|+.+++.++|+|+     +++++++...++.+
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   75 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNI-----VQYQESFEENGNLY   75 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCe-----eeeEeeecCCCeEE
Confidence            589999999999999999999999999999998642   2344578889999999988877     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++                 
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~-----------------  138 (256)
T cd08218          76 IVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG-----------------  138 (256)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC-----------------
Confidence            999999 99999999875545689999999999999999999999999999999999997655                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                .++|+|||.+.......   ....|+..|+|||++.+..++.++|+|||||++|+|++|..||...+..+
T Consensus       139 ----------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~  208 (256)
T cd08218         139 ----------TIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN  208 (256)
T ss_pred             ----------CEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH
Confidence                      46667776665433221   12467889999999998889999999999999999999999997765554


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+..  +..+                                               ......+.++.++|.+||+.
T Consensus       209 ~~~~~~~--~~~~-----------------------------------------------~~~~~~~~~~~~li~~~l~~  239 (256)
T cd08218         209 LVLKIIR--GSYP-----------------------------------------------PVSSHYSYDLRNLVSQLFKR  239 (256)
T ss_pred             HHHHHhc--CCCC-----------------------------------------------CCcccCCHHHHHHHHHHhhC
Confidence            4433321  1110                                               01224466899999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 013678          406 DPAERLKAREALRHPFF  422 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f  422 (438)
                      +|++||++.++++||||
T Consensus       240 ~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         240 NPRDRPSVNSILEKNFI  256 (256)
T ss_pred             ChhhCcCHHHHhhCcCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=1e-42  Score=328.33  Aligned_cols=280  Identities=27%  Similarity=0.447  Sum_probs=208.9

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      .+|++.+.||+|+||.||+|.+..+++.||+|++....  .....+.+|+.+++.+.|+|+     +++++++..++..|
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----~~~~~~~~~~~~~~   79 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANI-----VLLHDIIHTKETLT   79 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCE-----eEEEEEEecCCeEE
Confidence            67999999999999999999999999999999986432  223456789999999988877     99999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      +||||++++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++                  
T Consensus        80 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~------------------  140 (291)
T cd07870          80 FVFEYMHTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLG------------------  140 (291)
T ss_pred             EEEecccCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCC------------------
Confidence            999999888888776543 3578889999999999999999999999999999999997655                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCh-H
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN-L  324 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~-~  324 (438)
                               .++|+|||++......   .....++..|+|||.+.+. .++.++|||||||++|+|++|..||...+. .
T Consensus       141 ---------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~  211 (291)
T cd07870         141 ---------ELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF  211 (291)
T ss_pred             ---------cEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH
Confidence                     4666777666543221   1223578899999998764 578899999999999999999999976543 4


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +.+..+....+.++......... ...+........      .+......+          .. -..+.++.++|.+||+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~----------~~-~~~~~~~~~ll~~~l~  273 (291)
T cd07870         212 EQLEKIWTVLGVPTEDTWPGVSK-LPNYKPEWFLPC------KPQQLRVVW----------KR-LSRPPKAEDLASQMLM  273 (291)
T ss_pred             HHHHHHHHHcCCCChhhhhhhhh-cccccchhcccc------CCcchhhhc----------cc-cCCChHHHHHHHHHhC
Confidence            55555656666554443222211 000000000000      000000000          00 0125688999999999


Q ss_pred             cCCCCCCCHHHHhcCCCC
Q 013678          405 YDPAERLKAREALRHPFF  422 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f  422 (438)
                      .||++|||+.|++.||||
T Consensus       274 ~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         274 MFPKDRISAQDALLHPYF  291 (291)
T ss_pred             cCcccCcCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-44  Score=347.33  Aligned_cols=253  Identities=25%  Similarity=0.413  Sum_probs=208.5

Q ss_pred             eeeeecceEEEEEEECCCCcEEEEEEee-cchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-C
Q 013678           99 KMGEGTFGQVVECFDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-G  176 (438)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~  176 (438)
                      .||+|.||+||-|+|..|...+|||-+. +.....+....||.+.+.|+|.||     |+++|.+..++++-|.||-+ |
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNI-----VrYLGs~senGf~kIFMEqVPG  656 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNI-----VRYLGSVSENGFFKIFMEQVPG  656 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhH-----HHHhhccCCCCeEEEEeecCCC
Confidence            5999999999999999999999999886 344556778899999999999998     99999999999999999999 9


Q ss_pred             CCHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCC
Q 013678          177 PSLYDFLRKNSYRSF--PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  254 (438)
Q Consensus       177 ~~L~~~l~~~~~~~l--~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~  254 (438)
                      |+|.++++.+= +++  .+..+-.+.+||++||.|||++.|||||||-+||||+.                         
T Consensus       657 GSLSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNT-------------------------  710 (1226)
T KOG4279|consen  657 GSLSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNT-------------------------  710 (1226)
T ss_pred             CcHHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEee-------------------------
Confidence            99999998643 345  88999999999999999999999999999999999963                         


Q ss_pred             CCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013678          255 PKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  329 (438)
Q Consensus       255 ~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~  329 (438)
                       -.+.+||+|||.++....   -..++.||..|||||++..+  +|+.++|||||||++.||.||++||......+.. +
T Consensus       711 -ySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA-M  788 (1226)
T KOG4279|consen  711 -YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA-M  788 (1226)
T ss_pred             -ccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh-h
Confidence             245688999998876432   23457899999999999876  4999999999999999999999999654332211 1


Q ss_pred             HHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCC
Q 013678          330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  409 (438)
Q Consensus       330 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  409 (438)
                      ..-.+                                              -....+.+.+.+.+++.||.+|+..||.+
T Consensus       789 FkVGm----------------------------------------------yKvHP~iPeelsaeak~FilrcFepd~~~  822 (1226)
T KOG4279|consen  789 FKVGM----------------------------------------------YKVHPPIPEELSAEAKNFILRCFEPDPCD  822 (1226)
T ss_pred             hhhcc----------------------------------------------eecCCCCcHHHHHHHHHHHHHHcCCCccc
Confidence            10000                                              00111233456788999999999999999


Q ss_pred             CCCHHHHhcCCCCCCCCCCce
Q 013678          410 RLKAREALRHPFFTRDVRRPT  430 (438)
Q Consensus       410 Rpta~ell~hp~f~~~~~~~~  430 (438)
                      ||+|.++|..||++...+++.
T Consensus       823 R~sA~~LL~DpFlq~~~kk~r  843 (1226)
T KOG4279|consen  823 RPSAKDLLQDPFLQHNNKKPR  843 (1226)
T ss_pred             CccHHHhccCcccccCCCCCC
Confidence            999999999999998855443

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=2e-43  Score=331.15  Aligned_cols=255  Identities=22%  Similarity=0.362  Sum_probs=201.3

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ++|++++.||+|+||.||+|.+..+++.||+|++...  ......+.+|+.++++++|+|+     +++++++...+..+
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~   75 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYI-----IGFYGAFFVENRIS   75 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCe-----eeEEEEEEECCEEE
Confidence            3578999999999999999999999999999998653  2334668889999999988877     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|..+.      .+++..+..++.|++.||+|||++||+|+||||+|||++.++                 
T Consensus        76 lv~e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~-----------------  132 (279)
T cd06619          76 ICTEFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRG-----------------  132 (279)
T ss_pred             EEEecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCC-----------------
Confidence            999999 88886542      478999999999999999999999999999999999997655                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCC-CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  327 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~  327 (438)
                                .++|+|||++..... ......||..|+|||++.+..++.++|||||||++|+|++|..||.........
T Consensus       133 ----------~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~  202 (279)
T cd06619         133 ----------QVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS  202 (279)
T ss_pred             ----------CEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc
Confidence                      467777776654332 223357899999999999888999999999999999999999999653211100


Q ss_pred             ---HHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          328 ---AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       328 ---~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                         .........                                            ...........+.++.+||.+||+
T Consensus       203 ~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~li~~~l~  238 (279)
T cd06619         203 LMPLQLLQCIVD--------------------------------------------EDPPVLPVGQFSEKFVHFITQCMR  238 (279)
T ss_pred             cchHHHHHHHhc--------------------------------------------cCCCCCCCCcCCHHHHHHHHHHhh
Confidence               000000000                                            000000112346689999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      .||++||+++|+++||||......
T Consensus       239 ~~P~~Rp~~~eil~~~~~~~~~~~  262 (279)
T cd06619         239 KQPKERPAPENLMDHPFIVQYNDG  262 (279)
T ss_pred             CChhhCCCHHHHhcCcccccccCc
Confidence            999999999999999999875433

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=1e-42  Score=326.94  Aligned_cols=277  Identities=32%  Similarity=0.523  Sum_probs=213.2

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      +|++.++||.|++|.||+|++..+++.||||.++...  .....+.+|+.+++.++|+|+     +++++++.+.+..++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~l   75 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI-----VRLHDVIHTENKLML   75 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCE-----eeeeeeEeeCCcEEE
Confidence            5899999999999999999999999999999987532  234567789999999988877     999999999999999


Q ss_pred             EEccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKLGPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||+.++|.+++.... ...+++..+..++.||+.||+|||++||+||||||+||+++.++                  
T Consensus        76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~------------------  137 (284)
T cd07836          76 VFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRG------------------  137 (284)
T ss_pred             EEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC------------------
Confidence            99999779999887543 23589999999999999999999999999999999999997665                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                               .++|+|||.+......   .....++..|++||++.+. .++.++|||||||++|+|++|..||.+.+..+
T Consensus       138 ---------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~  208 (284)
T cd07836         138 ---------ELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED  208 (284)
T ss_pred             ---------cEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence                     4566666665433221   1223578899999998764 47899999999999999999999999888777


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+.+....+....+.... ....+.     ...+..               .........+..+..+.++|.+||+.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~l~~  267 (284)
T cd07836         209 QLLKIFRIMGTPTESTWPGIS-QLPEYK-----PTFPRY---------------PPQDLQQLFPHADPLGIDLLHRLLQL  267 (284)
T ss_pred             HHHHHHHHhCCCChhhHHHHh-cCchhc-----ccccCC---------------ChHHHHHHhhhcCcHHHHHHHHHhcC
Confidence            777776665544443322211 000000     000000               00000111234467899999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 013678          406 DPAERLKAREALRHPFF  422 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f  422 (438)
                      ||.+|||+.|+++||||
T Consensus       268 ~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         268 NPELRISAHDALQHPWF  284 (284)
T ss_pred             CcccCCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-44  Score=306.26  Aligned_cols=251  Identities=24%  Similarity=0.296  Sum_probs=198.8

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc-----
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-----  164 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-----  164 (438)
                      .+||++.+.||+|||+.||+++...+++.||+|++... .+..+..++|++..++++|+|+     ++++++...     
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~v-----l~l~dh~l~~~~D~   94 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNV-----LRLVDHQLREEKDG   94 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcch-----HHHHHHHHHhhccC
Confidence            47999999999999999999999999999999998754 3677889999999999999887     888887543     


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEecCcccccCCcc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                      ....||+++|+ .|+|.+.+...  .+..+++.++..|+.+|++||++||+..  ++||||||+|||+...+        
T Consensus        95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~--------  166 (302)
T KOG2345|consen   95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSG--------  166 (302)
T ss_pred             ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCC--------
Confidence            34699999999 99999999753  2347999999999999999999999998  99999999999996544        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC------------cccccCCCcchhHHHhC---CCCCcchhHHHH
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------------SYVVSTRHYRAPEVILG---LGWNYPCDLWSV  304 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------------~~~~gt~~y~aPE~~~~---~~~~~~~DiwSl  304 (438)
                                         .++|+|||++....-.-            ..-..|..|+|||.+.-   ...+.++|||||
T Consensus       167 -------------------~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSL  227 (302)
T KOG2345|consen  167 -------------------LPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSL  227 (302)
T ss_pred             -------------------ceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhh
Confidence                               67888888876533211            11256889999999864   347899999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhh
Q 013678          305 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  384 (438)
Q Consensus       305 G~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (438)
                      ||+||+|+.|..||...-         +.-|.             -.+.-..+...||                      
T Consensus       228 GCtLYa~mf~~sPfe~~~---------~~GgS-------------laLAv~n~q~s~P----------------------  263 (302)
T KOG2345|consen  228 GCTLYAMMFGESPFERIY---------QQGGS-------------LALAVQNAQISIP----------------------  263 (302)
T ss_pred             hHHHHHHHHcCCcchHHh---------hcCCe-------------EEEeeeccccccC----------------------
Confidence            999999999999994210         00000             0000111122222                      


Q ss_pred             hhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       385 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                        ....+++.+.+||+.||+.||.+||++.+++.+
T Consensus       264 --~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  264 --NSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             --CCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence              223478899999999999999999999999864

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=7e-43  Score=336.94  Aligned_cols=281  Identities=29%  Similarity=0.516  Sum_probs=219.2

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+..+|.+.+.||+|+||.||+|.+..+++.||||++.+.   ......+.+|+.+++.+.|+|+     +++++++...
T Consensus        12 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----v~~~~~~~~~   86 (342)
T cd07879          12 ELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENV-----IGLLDVFTSA   86 (342)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCc-----cchhheeccc
Confidence            3457899999999999999999999999999999998642   2233557789999999998887     9999887653


Q ss_pred             ------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          166 ------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       166 ------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                            ..+|+||||+..+|.+++.    ..+++..+..++.|++.||+|||++||+||||||+||+++.++        
T Consensus        87 ~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~--------  154 (342)
T cd07879          87 VSGDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDC--------  154 (342)
T ss_pred             ccCCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--------
Confidence                  3579999999778877652    2589999999999999999999999999999999999996654        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                         .++|+|||++...........++..|+|||++.+ ..++.++|||||||++|+|++|+.||
T Consensus       155 -------------------~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf  215 (342)
T cd07879         155 -------------------ELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLF  215 (342)
T ss_pred             -------------------CEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCC
Confidence                               5777888877665444444578889999999876 45889999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhh-hhhcCCCcccCCCCCCChhhHHHHHHhccch-hhhhhccCCchhHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAE-KYFRRGARLDWPDGATSRDSMRAVWKLLRLP-NLIMQHVDHSAGDLI  396 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~  396 (438)
                      .+.+....+..+....+..+..+......... .+....                     ...+ .......+..+..+.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~  274 (342)
T cd07879         216 KGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSL---------------------PKYPRKDFSTLFPKASPQAV  274 (342)
T ss_pred             CCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhc---------------------CCcccchHHHHhcCCCHHHH
Confidence            98887777887877777666555433321110 000000                     0000 000111234567899


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +||.+||+.||++|||+.+++.||||.+..
T Consensus       275 ~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         275 DLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             HHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence            999999999999999999999999998764

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-43  Score=328.97  Aligned_cols=253  Identities=27%  Similarity=0.416  Sum_probs=208.2

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ++|++.+.||.|+||.||+|.+..+++.||+|++....  .....+.+|+.+++.+.|+|+     +++++++.++..+|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~   75 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYI-----TKYYGSFLKGSKLW   75 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCe-----eeeeEEEEECCeEE
Confidence            47899999999999999999999999999999987532  334567789999999988877     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +|+||+ +++|.+++...   .+++..++.++.|++.||.|||+++|+|+||+|+||+++.++                 
T Consensus        76 ~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~-----------------  135 (274)
T cd06609          76 IIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEG-----------------  135 (274)
T ss_pred             EEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC-----------------
Confidence            999999 99999999764   689999999999999999999999999999999999997665                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                .++|+|||.+......   .....++..|+|||.+.+..++.++|||||||++|+|++|..||...+...
T Consensus       136 ----------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~  205 (274)
T cd06609         136 ----------DVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR  205 (274)
T ss_pred             ----------CEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH
Confidence                      4666677666554322   223478889999999998889999999999999999999999997655433


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC-chhHHHHHHHHccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH-SAGDLIDLLQGLLR  404 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ll~~~L~  404 (438)
                      ....+.....  |                                               ..... ++..+.++|.+||.
T Consensus       206 ~~~~~~~~~~--~-----------------------------------------------~~~~~~~~~~~~~~l~~~l~  236 (274)
T cd06609         206 VLFLIPKNNP--P-----------------------------------------------SLEGNKFSKPFKDFVSLCLN  236 (274)
T ss_pred             HHHHhhhcCC--C-----------------------------------------------CCcccccCHHHHHHHHHHhh
Confidence            3322221100  0                                               00011 46689999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      .||++|||++++++||||++..+.
T Consensus       237 ~~p~~Rpt~~~il~~~~~~~~~~~  260 (274)
T cd06609         237 KDPKERPSAKELLKHKFIKKAKKT  260 (274)
T ss_pred             CChhhCcCHHHHhhChhhcCCCcc
Confidence            999999999999999999986544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=1.2e-42  Score=333.20  Aligned_cols=284  Identities=28%  Similarity=0.488  Sum_probs=225.2

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc-C
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-R  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-~  165 (438)
                      +.++|++.+.||.|+||.||+|.+..+++.||+|++.+.   ....+.+.+|+.+++.+.|+|+     +++++++.. .
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~~   82 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENI-----ISLSDIFISPL   82 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCe-----eeEeeeEecCC
Confidence            568899999999999999999999999999999987542   2334667789999999998877     999998865 5


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ...|+||||++++|.+++...   .+++..+..++.||+.||+|||++||+||||||+||+++.++              
T Consensus        83 ~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~--------------  145 (328)
T cd07856          83 EDIYFVTELLGTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENC--------------  145 (328)
T ss_pred             CcEEEEeehhccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCC--------------
Confidence            689999999988999888653   588999999999999999999999999999999999996654              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                   .++|+|||.+...........++..|+|||.+.+ ..++.++|||||||++|+|++|..||......
T Consensus       146 -------------~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~  212 (328)
T cd07856         146 -------------DLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV  212 (328)
T ss_pred             -------------CEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                         5677777777655444444577889999998766 46899999999999999999999999988888


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhh-hhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRR-AEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .....+.+.++.+|..+....... ...++....                    .............++..+.++|.+||
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~li~~~l  272 (328)
T cd07856         213 NQFSIITDLLGTPPDDVINTICSENTLRFVQSLP--------------------KREPVPFSEKFKNADPSAIDLLEKML  272 (328)
T ss_pred             HHHHHHHHHhCCCCHHHHHhccchhhHHHHhhcc--------------------ccCCCcHHHHcCCCCHHHHHHHHHHc
Confidence            888888888898887765432111 011110000                    00000111222345778999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          404 RYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      +.||++|||+++++.||||......
T Consensus       273 ~~~P~~R~t~~ell~~~~~~~~~~~  297 (328)
T cd07856         273 VFDPQKRISAAEALAHPYLAPYHDP  297 (328)
T ss_pred             CCChhhCCCHHHHhcCCccccccCC
Confidence            9999999999999999999765444

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=6.1e-43  Score=328.88  Aligned_cols=278  Identities=29%  Similarity=0.514  Sum_probs=212.4

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ++|++.++||+|+||.||+|.+..+++.||+|++....   ...+.+.+|+++++.++|+|+     +++++++..++..
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~   75 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENL-----VNLIEVFRRKKRL   75 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcch-----hhHHHhcccCCeE
Confidence            47899999999999999999999899999999875422   234567789999999998887     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |+||||+ +++|.++.....  .+++..++.++.||+.||+|||++||+|+||+|+||+++.++                
T Consensus        76 ~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~----------------  137 (286)
T cd07846          76 YLVFEFVDHTVLDDLEKYPN--GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSG----------------  137 (286)
T ss_pred             EEEEecCCccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC----------------
Confidence            9999999 777777665443  589999999999999999999999999999999999997655                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                 .++|+|||++......   .....++..|+|||++.+. .++.++|||||||++|+|++|..||...+.
T Consensus       138 -----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~  206 (286)
T cd07846         138 -----------VVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD  206 (286)
T ss_pred             -----------cEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch
Confidence                       4666677666543221   1224678899999998764 478899999999999999999999988887


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .+....+....+.++...........  .. .  ....+..              ..........+.++..+.+|+.+||
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~--~~~~~~~--------------~~~~~~~~~~~~~~~~~~~li~~~l  267 (286)
T cd07846         207 IDQLYHIIKCLGNLIPRHQEIFQKNP--LF-A--GMRLPEV--------------KEIEPLEKRFPKLSGLVLDLAKQCL  267 (286)
T ss_pred             HHHHHHHHHHhCCCchhhHHHhccch--Hh-h--ccccccc--------------cCcchHHHhCCCcCHHHHHHHHHHh
Confidence            77777777766655432211000000  00 0  0000000              0000111123456788999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCC
Q 013678          404 RYDPAERLKAREALRHPFF  422 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~f  422 (438)
                      +.||++|||+.++++||||
T Consensus       268 ~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         268 RIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             cCCcccchhHHHHhcCCCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2.4e-43  Score=331.69  Aligned_cols=259  Identities=22%  Similarity=0.375  Sum_probs=207.5

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ++|++++.||+|+||.||+|.+..+++.||+|.+...  ......+.+|+.+++++.|+|+     +++++.+...+.++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~   75 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYI-----VDFYGAFFIEGAVY   75 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcH-----HhhhhheecCCeEE
Confidence            3689999999999999999999999999999988642  2334678889999999988877     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||+ +++|.+++.... ...+++..+..++.||+.||.|||+ .||+||||||+||+++.++               
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~---------------  140 (286)
T cd06622          76 MCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG---------------  140 (286)
T ss_pred             EEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC---------------
Confidence            999999 899999887631 2368999999999999999999996 5999999999999997654               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhCCC------CCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLG------WNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~------~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                  .++|+|||.+...... .....++..|+|||.+.+..      ++.++|||||||++|+|++|..||.
T Consensus       141 ------------~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~  208 (286)
T cd06622         141 ------------QVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYP  208 (286)
T ss_pred             ------------CEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCC
Confidence                        5777777776543222 23346788999999986543      5789999999999999999999997


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      ..........+.......+.                                              ..+..++.++.+||
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li  242 (286)
T cd06622         209 PETYANIFAQLSAIVDGDPP----------------------------------------------TLPSGYSDDAQDFV  242 (286)
T ss_pred             CcchhhHHHHHHHHhhcCCC----------------------------------------------CCCcccCHHHHHHH
Confidence            65444333333222211110                                              11223567899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          400 QGLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      .+||+.||++||++.++++||||......
T Consensus       243 ~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~  271 (286)
T cd06622         243 AKCLNKIPNRRPTYAQLLEHPWLVKYKNA  271 (286)
T ss_pred             HHHcccCcccCCCHHHHhcChhhhhccCC
Confidence            99999999999999999999999876544

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=2.2e-43  Score=333.08  Aligned_cols=257  Identities=26%  Similarity=0.457  Sum_probs=205.3

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      .++|+++++||.|+||.||+|++..+++.||+|.+.... ...+.+.+|+.+++.+.|+|+     +++++.+..++.+|
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~   85 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYI-----VKLLGAFYWDGKLW   85 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcE-----eeeEEEEEeCCeEE
Confidence            467999999999999999999999999999999987543 345667889999999988877     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|..++.+.. ..+++..+..++.||+.||.|||++||+||||||+||+++.++                 
T Consensus        86 lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~-----------------  147 (292)
T cd06644          86 IMIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDG-----------------  147 (292)
T ss_pred             EEEecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCC-----------------
Confidence            999999 889988876543 4689999999999999999999999999999999999997655                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhC-----CCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                .++|+|||.+......   .....++..|+|||++.+     ..++.++|||||||++|+|++|..||..
T Consensus       148 ----------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~  217 (292)
T cd06644         148 ----------DIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE  217 (292)
T ss_pred             ----------CEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcc
Confidence                      4666666665432211   123467889999999853     3467899999999999999999999977


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      .+.......+...  ..|                                             .......++.++.+||.
T Consensus       218 ~~~~~~~~~~~~~--~~~---------------------------------------------~~~~~~~~~~~~~~li~  250 (292)
T cd06644         218 LNPMRVLLKIAKS--EPP---------------------------------------------TLSQPSKWSMEFRDFLK  250 (292)
T ss_pred             ccHHHHHHHHhcC--CCc---------------------------------------------cCCCCcccCHHHHHHHH
Confidence            6544333222110  000                                             00112245668899999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          401 GLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      +||..||++||+++++++||||..-..
T Consensus       251 ~~l~~~p~~Rp~~~~il~~~~~~~~~~  277 (292)
T cd06644         251 TALDKHPETRPSAAQLLEHPFVSSVTS  277 (292)
T ss_pred             HHhcCCcccCcCHHHHhcCcccccccc
Confidence            999999999999999999999986443

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=4.7e-43  Score=324.05  Aligned_cols=250  Identities=27%  Similarity=0.453  Sum_probs=204.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      ++|++.++||+|+||.||+|.+..+++.|++|.+..... .+.+.+|+.+++.++|+|+     +++++++......|++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i-----~~~~~~~~~~~~~~l~   76 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYI-----VKYYGSYFKNTDLWIV   76 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcE-----eeeeeeeecCCcEEEE
Confidence            578999999999999999999998899999999876443 6788899999999988777     9999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      +||+ +++|.+++.... ..+++..++.++.|++.||.|||+.||+|+||+|+||+++.++                   
T Consensus        77 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~-------------------  136 (256)
T cd06612          77 MEYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEG-------------------  136 (256)
T ss_pred             EecCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCC-------------------
Confidence            9999 899999997543 4789999999999999999999999999999999999997665                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  327 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~  327 (438)
                              .++|+|||.+.......   ....|+..|+|||++.+..++.++|||||||++|+|++|..||.........
T Consensus       137 --------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~  208 (256)
T cd06612         137 --------QAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI  208 (256)
T ss_pred             --------cEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh
Confidence                    45666666665433221   2345788999999999888999999999999999999999999765443322


Q ss_pred             HHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCC
Q 013678          328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  407 (438)
Q Consensus       328 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  407 (438)
                      ..+...   .+                                            ........++..+.++|.+||+.||
T Consensus       209 ~~~~~~---~~--------------------------------------------~~~~~~~~~~~~~~~~i~~~l~~~P  241 (256)
T cd06612         209 FMIPNK---PP--------------------------------------------PTLSDPEKWSPEFNDFVKKCLVKDP  241 (256)
T ss_pred             hhhccC---CC--------------------------------------------CCCCchhhcCHHHHHHHHHHHhcCh
Confidence            211100   00                                            0001112345689999999999999


Q ss_pred             CCCCCHHHHhcCCCC
Q 013678          408 AERLKAREALRHPFF  422 (438)
Q Consensus       408 ~~Rpta~ell~hp~f  422 (438)
                      ++|||+.|+|+||||
T Consensus       242 ~~Rps~~~il~~~~~  256 (256)
T cd06612         242 EERPSAIQLLQHPFI  256 (256)
T ss_pred             hhCcCHHHHhcCCCC
Confidence            999999999999998

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=2e-43  Score=328.82  Aligned_cols=251  Identities=24%  Similarity=0.381  Sum_probs=199.5

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      ++|++.+.||+|+||.||+|++..+++.||+|+++... .....+.+|+.+++.++|+++     +++++.+...+.+|+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~i-----i~~~~~~~~~~~~~l   83 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNI-----VAYFGSYLRRDKLWI   83 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCe-----eeEEEEEEeCCEEEE
Confidence            57899999999999999999999999999999987543 233456789999999988877     999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||+ +++|.+++...+  .+++..++.++.|++.||.|||++||+|+||||+||+++.++.                 
T Consensus        84 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~-----------------  144 (267)
T cd06645          84 CMEFCGGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGH-----------------  144 (267)
T ss_pred             EEeccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC-----------------
Confidence            99999 899999987654  7999999999999999999999999999999999999976654                 


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHh---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                ++|+|||++......   .....|+..|+|||++.   ...++.++|||||||++|+|++|..||.....
T Consensus       145 ----------~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~  214 (267)
T cd06645         145 ----------VKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP  214 (267)
T ss_pred             ----------EEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccc
Confidence                      566666655433211   12347899999999985   44588999999999999999999999965543


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      ......+.......+                                             .......++..+.+||.+||
T Consensus       215 ~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~~li~~~l  249 (267)
T cd06645         215 MRALFLMTKSNFQPP---------------------------------------------KLKDKMKWSNSFHHFVKMAL  249 (267)
T ss_pred             hhhHHhhhccCCCCC---------------------------------------------cccccCCCCHHHHHHHHHHc
Confidence            332222111000000                                             00001134567899999999


Q ss_pred             ccCCCCCCCHHHHhcCCC
Q 013678          404 RYDPAERLKAREALRHPF  421 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~  421 (438)
                      +.||++|||++++++|||
T Consensus       250 ~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         250 TKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             cCCchhCcCHHHHhcCCC
Confidence            999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.1e-42  Score=327.17  Aligned_cols=258  Identities=24%  Similarity=0.414  Sum_probs=202.4

Q ss_pred             cCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceec-
Q 013678           86 IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD-  163 (438)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~-  163 (438)
                      .-....++|++.+.||+|+||.||+|.+..+++.||+|++.........+.+|+.++..+ .|+|+     +++++++. 
T Consensus        12 ~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i-----~~~~~~~~~   86 (286)
T cd06638          12 SFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNV-----VKFYGMYYK   86 (286)
T ss_pred             cCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCe-----eeeeeeeee
Confidence            334567899999999999999999999999999999999876444456678899999999 47776     99999873 


Q ss_pred             ----cCCeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccC
Q 013678          164 ----YRNHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  236 (438)
Q Consensus       164 ----~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~  236 (438)
                          .++.+++||||+ +++|.+++...  ....+++..+..++.|++.||.|||+++|+||||||+||+++.++     
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~-----  161 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEG-----  161 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCC-----
Confidence                456899999999 99999987632  224688999999999999999999999999999999999997655     


Q ss_pred             CccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhC-----CCCCcchhHHHHHHHH
Q 013678          237 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCIL  308 (438)
Q Consensus       237 df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il  308 (438)
                                            .++|+|||++......   .....|+..|+|||++..     ..++.++|||||||++
T Consensus       162 ----------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~  219 (286)
T cd06638         162 ----------------------GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITA  219 (286)
T ss_pred             ----------------------CEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHH
Confidence                                  4666777766543221   123468999999999853     3478899999999999


Q ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhcc
Q 013678          309 VELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  388 (438)
Q Consensus       309 ~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (438)
                      |+|++|..||...+....+..+...  ..+                                             .....
T Consensus       220 ~el~~g~~p~~~~~~~~~~~~~~~~--~~~---------------------------------------------~~~~~  252 (286)
T cd06638         220 IELGDGDPPLADLHPMRALFKIPRN--PPP---------------------------------------------TLHQP  252 (286)
T ss_pred             HHHhcCCCCCCCCchhHHHhhcccc--CCC---------------------------------------------cccCC
Confidence            9999999999765443322211110  000                                             00011


Q ss_pred             CCchhHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q 013678          389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       389 ~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      ..++..+.+||.+||+.||++|||+.|+++|+||
T Consensus       253 ~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         253 ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             CCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            2245679999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=1e-42  Score=326.90  Aligned_cols=276  Identities=32%  Similarity=0.533  Sum_probs=214.7

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      |++.+.||.|++|.||+|.+..+|..||+|++....   .....+.+|+.+++.++|+++     +++++++.+++..|+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i-----v~~~~~~~~~~~~~i   75 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNI-----VRLLDVVHSENKLYL   75 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCc-----cCHhheeccCCeEEE
Confidence            678899999999999999999999999999986432   223567789999999998887     999999999999999


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       171 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      ||||++++|.+++.......+++..+..++.|++.||+|||+++++||||+|+||+++.++                   
T Consensus        76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~-------------------  136 (283)
T cd07835          76 VFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREG-------------------  136 (283)
T ss_pred             EEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC-------------------
Confidence            9999988999999876545689999999999999999999999999999999999997655                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                              .++|+|||.+.......   ....++..|+|||++.+. .++.++|||||||++|+|++|..||...+....
T Consensus       137 --------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~  208 (283)
T cd07835         137 --------ALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ  208 (283)
T ss_pred             --------cEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                    46666666665432211   223568899999988765 478999999999999999999999998888777


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      +..+.+..+.+....+....... .+...     .+..               ...........++.++.++|.+||+.|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~---------------~~~~~~~~~~~~~~~~~~li~~~l~~~  267 (283)
T cd07835         209 LFRIFRTLGTPDEDVWPGVTSLP-DYKPT-----FPKW---------------ARQDLSKVVPNLDEDGLDLLSKMLVYD  267 (283)
T ss_pred             HHHHHHHhCCCChHHhhhhhhch-hhhhh-----cccc---------------cccchhhhcCCCCHHHHHHHHHHhcCC
Confidence            77777766665544322211100 00000     0000               000011223456778999999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 013678          407 PAERLKAREALRHPFF  422 (438)
Q Consensus       407 P~~Rpta~ell~hp~f  422 (438)
                      |++|||++|+++||||
T Consensus       268 P~~Rpt~~~il~~~~~  283 (283)
T cd07835         268 PAKRISAKAALQHPYF  283 (283)
T ss_pred             hhhCcCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=4.5e-43  Score=337.50  Aligned_cols=300  Identities=26%  Similarity=0.455  Sum_probs=220.2

Q ss_pred             ccCCceEEE-eeeeeecceEEEEEEECCCCcEEEEEEeecchhhH---------------HHHHHHHHHHHHHHhcCCCC
Q 013678           89 NLTPRCKIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---------------EAAMIEIDVLQRLARHDIGG  152 (438)
Q Consensus        89 ~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---------------~~~~~E~~~l~~l~~~~i~~  152 (438)
                      .+.+||..+ +.||.|+||.||+|.+..+++.||||+++......               ..+.+|+.+++.++|+|+  
T Consensus         5 ~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--   82 (335)
T PTZ00024          5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENI--   82 (335)
T ss_pred             ccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcce--
Confidence            355778654 67999999999999999999999999986432211               246789999999988877  


Q ss_pred             cceEEecceeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcc
Q 013678          153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY  232 (438)
Q Consensus       153 ~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~  232 (438)
                         +++++++..++..|+||||+.++|.+++....  .+++..+..++.||+.||+|||++||+|+||||+||+++.++.
T Consensus        83 ---v~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~  157 (335)
T PTZ00024         83 ---MGLVDVYVEGDFINLVMDIMASDLKKVVDRKI--RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGI  157 (335)
T ss_pred             ---eeeeEEEecCCcEEEEEeccccCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCC
Confidence               99999999999999999999889999997654  6899999999999999999999999999999999999988887


Q ss_pred             cccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHH
Q 013678          233 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVEL  311 (438)
Q Consensus       233 ~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~el  311 (438)
                      ++++|||++..........        ..-.+.+..  .........++..|+|||.+.+. .++.++|||||||++|+|
T Consensus       158 ~kl~dfg~~~~~~~~~~~~--------~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el  227 (335)
T PTZ00024        158 CKIADFGLARRYGYPPYSD--------TLSKDETMQ--RREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAEL  227 (335)
T ss_pred             EEECCccceeecccccccc--------ccccccccc--ccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHH
Confidence            7777777654332111000        000000000  00111223568899999998765 468999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCc
Q 013678          312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  391 (438)
Q Consensus       312 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (438)
                      ++|..||.+.+..+.+..+....+.++...+....... .+        .+...             ..+..........
T Consensus       228 ~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~--------~~~~~-------------~~~~~~~~~~~~~  285 (335)
T PTZ00024        228 LTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLP-LY--------TEFTP-------------RKPKDLKTIFPNA  285 (335)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcc-cc--------cccCc-------------CCcccHHHhCcCC
Confidence            99999999988888888887777665543211110000 00        00000             0001111122345


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       392 ~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      +.++.++|.+||+.||++|||++|+|.||||++...
T Consensus       286 ~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~  321 (335)
T PTZ00024        286 SDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPL  321 (335)
T ss_pred             ChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCC
Confidence            678999999999999999999999999999987643

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=8.5e-43  Score=322.35  Aligned_cols=250  Identities=27%  Similarity=0.403  Sum_probs=207.3

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.+...   ......+.+|+.+++.++|+++     +++++.+..++..+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~   75 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNI-----IEYYENFLEDKALM   75 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCch-----hheeeeEecCCEEE
Confidence            589999999999999999999999999999998643   2345677889999999988877     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++.......+++..+..++.|++.||+|||++||+|+||||+||+++.++                 
T Consensus        76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~-----------------  138 (256)
T cd08220          76 IVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHK-----------------  138 (256)
T ss_pred             EEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-----------------
Confidence            999999 89999999876555689999999999999999999999999999999999996433                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                               ..++|+|||.+.......  ....|+..|+|||.+.+..++.++||||||+++|+|++|..||...+....
T Consensus       139 ---------~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~  209 (256)
T cd08220         139 ---------MVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL  209 (256)
T ss_pred             ---------CEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH
Confidence                     246778888776544322  234688899999999988889999999999999999999999977655443


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      ...+....  .                                               .......+.++.+++.+||..|
T Consensus       210 ~~~~~~~~--~-----------------------------------------------~~~~~~~~~~l~~li~~~l~~~  240 (256)
T cd08220         210 VLKIMSGT--F-----------------------------------------------APISDRYSPDLRQLILSMLNLD  240 (256)
T ss_pred             HHHHHhcC--C-----------------------------------------------CCCCCCcCHHHHHHHHHHccCC
Confidence            33222110  0                                               0011235678999999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 013678          407 PAERLKAREALRHPFF  422 (438)
Q Consensus       407 P~~Rpta~ell~hp~f  422 (438)
                      |++|||+.|+++||||
T Consensus       241 p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         241 PSKRPQLSQIMAQPIC  256 (256)
T ss_pred             hhhCCCHHHHhhCCCC
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-43  Score=351.46  Aligned_cols=245  Identities=30%  Similarity=0.390  Sum_probs=197.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec-chhhHHHHHHHHHHHHHHH-hcCCCCcceEEecce-ecc----
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS-INKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNW-FDY----  164 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~-~~~----  164 (438)
                      .+++|.+.|.+|||+.||+|++...|..||+|++-. +....+.+.+||.+|+.|. |+||     |.+++. ...    
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nI-----V~yidss~~~~~~~  111 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNI-----VSYIDSSAINRSSN  111 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCce-----eeEeccccccccCC
Confidence            578999999999999999999998888999998754 4456678889999999998 5555     999993 221    


Q ss_pred             --CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEecCcccccCCcc
Q 013678          165 --RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       165 --~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                        .-.+.|.|||| ||+|-|++..+....|++.++++|++|+++|+.+||...  |||||||-|||||+.+|        
T Consensus       112 ~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g--------  183 (738)
T KOG1989|consen  112 NGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADG--------  183 (738)
T ss_pred             CceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCC--------
Confidence              13789999999 899999999766667999999999999999999999998  99999999999997766        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-c-----------ccccCCCcchhHHHh---CCCCCcchhHHHH
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-S-----------YVVSTRHYRAPEVIL---GLGWNYPCDLWSV  304 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~-----------~~~gt~~y~aPE~~~---~~~~~~~~DiwSl  304 (438)
                                         .+||||||+|....... +           ...-|+.|+|||++.   +.+.+.|+|||+|
T Consensus       184 -------------------~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWAL  244 (738)
T KOG1989|consen  184 -------------------NYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWAL  244 (738)
T ss_pred             -------------------CEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHH
Confidence                               57778888775432222 1           135699999999985   5679999999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhh
Q 013678          305 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  384 (438)
Q Consensus       305 G~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (438)
                      ||+||.|+....||.......++    ..                        ..                        .
T Consensus       245 GclLYkLCy~t~PFe~sg~laIl----ng------------------------~Y------------------------~  272 (738)
T KOG1989|consen  245 GCLLYKLCYFTTPFEESGKLAIL----NG------------------------NY------------------------S  272 (738)
T ss_pred             HHHHHHHHHhCCCcCcCcceeEE----ec------------------------cc------------------------c
Confidence            99999999999999764221111    00                        11                        1


Q ss_pred             hhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCC
Q 013678          385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP  420 (438)
Q Consensus       385 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp  420 (438)
                      ....+.++..+.+||+.||+.||.+||++-+++.+-
T Consensus       273 ~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~  308 (738)
T KOG1989|consen  273 FPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI  308 (738)
T ss_pred             CCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence            122346788999999999999999999999988653

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=1.2e-42  Score=327.80  Aligned_cols=255  Identities=26%  Similarity=0.428  Sum_probs=202.1

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccC---
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR---  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~---  165 (438)
                      ..++|++.+.||+|+||.||+|.+..+++.+|+|++.........+.+|+.++.++ +|+|+     +++++++...   
T Consensus        20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni-----~~~~~~~~~~~~~   94 (291)
T cd06639          20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNV-----VKFYGMFYKADKL   94 (291)
T ss_pred             CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCe-----EEEEEEEEecccc
Confidence            46889999999999999999999999999999999876555556778899999988 56666     9999987643   


Q ss_pred             --CeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          166 --NHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       166 --~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                        +..++||||+ +++|.+++...  ....+++..++.++.|++.||+|||++||+||||||+||+++.++         
T Consensus        95 ~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~---------  165 (291)
T cd06639          95 VGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEG---------  165 (291)
T ss_pred             CCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC---------
Confidence              4689999999 99999988642  234689999999999999999999999999999999999997655         


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-----CCCcchhHHHHHHHHHHHH
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-----GWNYPCDLWSVGCILVELC  312 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlG~il~ell  312 (438)
                                        .++|+|||.+......   .....|+..|+|||++...     .++.++|||||||++|+|+
T Consensus       166 ------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~  227 (291)
T cd06639         166 ------------------GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELG  227 (291)
T ss_pred             ------------------CEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHh
Confidence                              4677777766543221   1234688899999998653     2678999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCch
Q 013678          313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  392 (438)
Q Consensus       313 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (438)
                      +|+.||...+....+..+.+.  ..+                                             ........+
T Consensus       228 ~g~~p~~~~~~~~~~~~~~~~--~~~---------------------------------------------~~~~~~~~~  260 (291)
T cd06639         228 DGDPPLFDMHPVKTLFKIPRN--PPP---------------------------------------------TLLHPEKWC  260 (291)
T ss_pred             hCCCCCCCCcHHHHHHHHhcC--CCC---------------------------------------------CCCcccccC
Confidence            999999776554433322111  000                                             000112345


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q 013678          393 GDLIDLLQGLLRYDPAERLKAREALRHPFFT  423 (438)
Q Consensus       393 ~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~  423 (438)
                      ..+.+||.+||+.||++||++.|+++||||+
T Consensus       261 ~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         261 RSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             HHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            5789999999999999999999999999995

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=3.3e-43  Score=327.41  Aligned_cols=252  Identities=24%  Similarity=0.351  Sum_probs=199.5

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      .++|++.++||+|+||.||+|.+..+++.||+|++.... .....+.+|+.++..+.|+++     +++++++..++.++
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----i~~~~~~~~~~~~~   82 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNI-----VAYFGSYLSREKLW   82 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCe-----eeeeEEEEeCCEEE
Confidence            357999999999999999999999999999999987432 334567789999999988877     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++....  .+++..+..++.|++.||+|||++||+||||||+||+++.++                 
T Consensus        83 iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~-----------------  143 (267)
T cd06646          83 ICMEYCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNG-----------------  143 (267)
T ss_pred             EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC-----------------
Confidence            999999 889999987654  689999999999999999999999999999999999997655                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                .++|+|||++......   .....|+..|+|||.+..   ..++.++|||||||++|+|++|..||....
T Consensus       144 ----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~  213 (267)
T cd06646         144 ----------DVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLH  213 (267)
T ss_pred             ----------CEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccc
Confidence                      4666666666543221   123468889999999853   347889999999999999999999996543


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      .......+.......                        +                     .......++..+.+||.+|
T Consensus       214 ~~~~~~~~~~~~~~~------------------------~---------------------~~~~~~~~~~~~~~li~~~  248 (267)
T cd06646         214 PMRALFLMSKSNFQP------------------------P---------------------KLKDKTKWSSTFHNFVKIS  248 (267)
T ss_pred             hhhhheeeecCCCCC------------------------C---------------------CCccccccCHHHHHHHHHH
Confidence            322211111000000                        0                     0001123467899999999


Q ss_pred             cccCCCCCCCHHHHhcCCC
Q 013678          403 LRYDPAERLKAREALRHPF  421 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~  421 (438)
                      |+.||++|||++++++|+|
T Consensus       249 l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         249 LTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             hhCChhhCcCHHHHhcCCC
Confidence            9999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.2e-45  Score=367.20  Aligned_cols=256  Identities=27%  Similarity=0.416  Sum_probs=212.4

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      .+.|.|++.||+|+||.|.+++.+.+++.||+|++++..    .....|..|..+|..-+.+-     |+.++-.|++++
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~W-----iv~LhyAFQD~~  148 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEW-----IVQLHYAFQDER  148 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHH-----HHHHHHHhcCcc
Confidence            478999999999999999999999999999999998632    23456778888887655444     499999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ++|+||||| ||+|..++.+..  .+++..++.|+..|+.||+-||+.|+|||||||+||||+..|+             
T Consensus       149 ~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GH-------------  213 (1317)
T KOG0612|consen  149 YLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGH-------------  213 (1317)
T ss_pred             ceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCc-------------
Confidence            999999999 999999999876  7999999999999999999999999999999999999987775             


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhC-----CCCCcchhHHHHHHHHHHHHhCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~~  316 (438)
                                    +||+|||.+.......    ...+|||.|++||++..     +.|+..+|+||+||++|||+.|..
T Consensus       214 --------------ikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~T  279 (1317)
T KOG0612|consen  214 --------------IKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGET  279 (1317)
T ss_pred             --------------EeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCC
Confidence                          5666666555444322    33599999999999973     458999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||...+-.+.+..|...-.                      .+.+|+                        ...+|.+++
T Consensus       280 PFYadslveTY~KIm~hk~----------------------~l~FP~------------------------~~~VSeeak  313 (1317)
T KOG0612|consen  280 PFYADSLVETYGKIMNHKE----------------------SLSFPD------------------------ETDVSEEAK  313 (1317)
T ss_pred             cchHHHHHHHHHHHhchhh----------------------hcCCCc------------------------ccccCHHHH
Confidence            9998887777777754310                      112221                        124688999


Q ss_pred             HHHHHccccCCCCCCC---HHHHhcCCCCCCCCC
Q 013678          397 DLLQGLLRYDPAERLK---AREALRHPFFTRDVR  427 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpt---a~ell~hp~f~~~~~  427 (438)
                      +||.++|. +|+.|..   ++++.+||||.+...
T Consensus       314 dLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W  346 (1317)
T KOG0612|consen  314 DLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDW  346 (1317)
T ss_pred             HHHHHHhc-ChhhhcccccHHHHHhCccccCCCh
Confidence            99999775 8889998   999999999987643

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=6.4e-43  Score=325.41  Aligned_cols=256  Identities=26%  Similarity=0.421  Sum_probs=200.7

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----------hhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      +|.+...||+|+||.||+|.+..+++.||+|.+....          ...+.+.+|+.+++.+.|+++     +++++++
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~   75 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENI-----VQYLGSS   75 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCe-----eeEEEEE
Confidence            4778899999999999999998899999999886421          122467789999999998877     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      ...+..++||||+ +++|.+++....  .+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||++
T Consensus        76 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~  153 (267)
T cd06628          76 LDADHLNIFLEYVPGGSVAALLNNYG--AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGIS  153 (267)
T ss_pred             EeCCccEEEEEecCCCCHHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCC
Confidence            9999999999999 899999998754  6899999999999999999999999999999999999987765555555543


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                      .....+..                  ............|+..|+|||.+.+..++.++|||||||++|+|++|..||...
T Consensus       154 ~~~~~~~~------------------~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  215 (267)
T cd06628         154 KKLEANSL------------------STKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDC  215 (267)
T ss_pred             cccccccc------------------cCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCc
Confidence            32211000                  000000112245788999999999888999999999999999999999999875


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +.......+....  .                                               .......+..+.++|++
T Consensus       216 ~~~~~~~~~~~~~--~-----------------------------------------------~~~~~~~~~~~~~li~~  246 (267)
T cd06628         216 TQLQAIFKIGENA--S-----------------------------------------------PEIPSNISSEAIDFLEK  246 (267)
T ss_pred             cHHHHHHHHhccC--C-----------------------------------------------CcCCcccCHHHHHHHHH
Confidence            5433332221100  0                                               01112346789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCC
Q 013678          402 LLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f  422 (438)
                      ||+.||.+||++.|+++||||
T Consensus       247 ~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         247 TFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             HccCCchhCcCHHHHhhCCCC
Confidence            999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.3e-43  Score=327.01  Aligned_cols=253  Identities=26%  Similarity=0.424  Sum_probs=202.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccC----
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR----  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~----  165 (438)
                      .++|++.+.||+|+||.||+|.+..+++.|++|++.......+.+.+|+.+++++ .|+|+     +++++++...    
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----~~~~~~~~~~~~~~   79 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNI-----ATFYGAFIKKNPPG   79 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCCh-----heEEEEEEecCCCC
Confidence            4789999999999999999999998999999999987666667788999999998 57776     9999998653    


Q ss_pred             --CeEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          166 --NHICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       166 --~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                        ..+++||||+ +++|.+++....  ...+++..++.++.|++.||.|||++||+|+||+|+||+++.++         
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~---------  150 (275)
T cd06608          80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNA---------  150 (275)
T ss_pred             cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCC---------
Confidence              4599999999 889999987532  35789999999999999999999999999999999999997665         


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-----CCCcchhHHHHHHHHHHHH
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-----GWNYPCDLWSVGCILVELC  312 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlG~il~ell  312 (438)
                                        .++|+|||.+......   .....|+..|+|||++...     .++.++|||||||++|+|+
T Consensus       151 ------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~  212 (275)
T cd06608         151 ------------------EVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELA  212 (275)
T ss_pred             ------------------eEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHH
Confidence                              4566666665443221   1234688899999998643     3678999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCch
Q 013678          313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  392 (438)
Q Consensus       313 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (438)
                      +|..||...........+...   .+.                                            .......++
T Consensus       213 ~g~~p~~~~~~~~~~~~~~~~---~~~--------------------------------------------~~~~~~~~~  245 (275)
T cd06608         213 DGKPPLCDMHPMRALFKIPRN---PPP--------------------------------------------TLKSPENWS  245 (275)
T ss_pred             hCCCCccccchHHHHHHhhcc---CCC--------------------------------------------CCCchhhcC
Confidence            999999765444333322211   000                                            000112346


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q 013678          393 GDLIDLLQGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       393 ~~l~~ll~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      ..+.+||.+||..||++|||+.++++|||+
T Consensus       246 ~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         246 KKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            689999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1.3e-42  Score=329.90  Aligned_cols=271  Identities=25%  Similarity=0.381  Sum_probs=207.4

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      .+|++++.||+|+||.||++.+..+++.||+|.+....    .....+.+|+.+++.++|+|+     +++++.+..+++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~   75 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFV-----VSMFCSFETKRH   75 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCe-----eeeEEEEecCCE
Confidence            36899999999999999999999999999999987532    233566789999999888777     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|+||||+ |++|.+++....  .+++..+..++.|++.||.|||++||+||||||+||+++.++.++++|||++.....
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~  153 (305)
T cd05609          76 LCMVMEYVEGGDCATLLKNIG--ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM  153 (305)
T ss_pred             EEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence            99999999 899999997754  689999999999999999999999999999999999998887766666665432110


Q ss_pred             CCCcccCCCCCCCeEEecCCCCccc-CCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                      ..          ...+.+....... ........|+..|+|||.+.+..++.++|||||||++|+|++|..||.+....+
T Consensus       154 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~  223 (305)
T cd05609         154 SL----------TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE  223 (305)
T ss_pred             Cc----------cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            00          0000000000000 001112357889999999988889999999999999999999999998766554


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+.......|                        .                       .....+.++.+||.+||+.
T Consensus       224 ~~~~~~~~~~~~~------------------------~-----------------------~~~~~~~~~~~li~~~l~~  256 (305)
T cd05609         224 LFGQVISDDIEWP------------------------E-----------------------GDEALPADAQDLISRLLRQ  256 (305)
T ss_pred             HHHHHHhcccCCC------------------------C-----------------------ccccCCHHHHHHHHHHhcc
Confidence            4433322110100                        0                       0113467899999999999


Q ss_pred             CCCCCCC---HHHHhcCCCCCCCC
Q 013678          406 DPAERLK---AREALRHPFFTRDV  426 (438)
Q Consensus       406 dP~~Rpt---a~ell~hp~f~~~~  426 (438)
                      ||++||+   +.++|+||||....
T Consensus       257 ~P~~R~~~~~~~~ll~~~~~~~~~  280 (305)
T cd05609         257 NPLERLGTGGAFEVKQHRFFLGLD  280 (305)
T ss_pred             ChhhccCccCHHHHHhCccccCCC
Confidence            9999997   89999999996643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=8.5e-43  Score=324.24  Aligned_cols=257  Identities=26%  Similarity=0.403  Sum_probs=200.4

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-------hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      +|++.+.||.|+||.||+|.+ .+++.+|+|.++...       .....+.+|+.+++.++|+|+     +++++++.+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~   74 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNI-----VQYLGTCLDD   74 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCE-----eeEeeEeecC
Confidence            478899999999999999986 478889999886421       223557789999999988877     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +..++||||+ +++|.+++.+..  .+++..+..++.|++.||+|||+.||+|+||||+||+++.++.++++|||++...
T Consensus        75 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  152 (265)
T cd06631          75 NTISIFMEFVPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL  152 (265)
T ss_pred             CeEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence            9999999999 999999997754  6899999999999999999999999999999999999987775555555543321


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                      .....                  ............|+..|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus       153 ~~~~~------------------~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~  214 (265)
T cd06631         153 AWVGL------------------HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL  214 (265)
T ss_pred             hhccc------------------cccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH
Confidence            11000                  000001112246889999999999888999999999999999999999999765544


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      .....+....+..|                                               .....++.++.++|++||.
T Consensus       215 ~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~i~~~l~  247 (265)
T cd06631         215 AAMFYIGAHRGLMP-----------------------------------------------RLPDSFSAAAIDFVTSCLT  247 (265)
T ss_pred             HHHHHhhhccCCCC-----------------------------------------------CCCCCCCHHHHHHHHHHhc
Confidence            33322222111111                                               1123456789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCC
Q 013678          405 YDPAERLKAREALRHPFF  422 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f  422 (438)
                      .||++|||+.|+++||||
T Consensus       248 ~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         248 RDQHERPSALQLLRHDFL  265 (265)
T ss_pred             CCcccCCCHHHHhcCCCC
Confidence            999999999999999998

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.7e-43  Score=337.41  Aligned_cols=282  Identities=28%  Similarity=0.476  Sum_probs=221.3

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC---
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN---  166 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~---  166 (438)
                      ||++.+.||.|+||.||+|++..+++.||||++...   ....+.+.+|+.+++.++|+++     +++++++....   
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   75 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENI-----IGLLDILRPPSPED   75 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcch-----hhhhhhhcccCccc
Confidence            689999999999999999999989999999998753   2344678889999999998877     99999887765   


Q ss_pred             --eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          167 --HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       167 --~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                        .+|+||||++++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.            
T Consensus        76 ~~~~~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~------------  141 (330)
T cd07834          76 FNDVYIVTELMETDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCD------------  141 (330)
T ss_pred             ccceEEEecchhhhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC------------
Confidence              899999999879999987654  7999999999999999999999999999999999999977664            


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC------CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                     ++|+|||.+......      .....++..|+|||++.+. .++.++|||||||++|+|++|..|
T Consensus       142 ---------------~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~p  206 (330)
T cd07834         142 ---------------LKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPL  206 (330)
T ss_pred             ---------------EEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCC
Confidence                           555555555443222      1234678899999999887 789999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhh-hhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADR-RAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      |.+.+..+....+....+.++...+..... ....+....                    ...............+.++.
T Consensus       207 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~  266 (330)
T cd07834         207 FPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSL--------------------PKKPKKPLSKLFPGASPEAI  266 (330)
T ss_pred             cCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhc--------------------ccCCcchhHHhcccCCHHHH
Confidence            999998888888888887776544321110 000000000                    00000111122334678899


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      +||.+||++||.+|||++++++||||++....
T Consensus       267 ~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~  298 (330)
T cd07834         267 DLLEKMLVFDPKKRITADEALAHPYLAQLHDP  298 (330)
T ss_pred             HHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence            99999999999999999999999999875443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=2.1e-42  Score=319.93  Aligned_cols=249  Identities=30%  Similarity=0.475  Sum_probs=206.3

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +|++++.||.|+||.||.+++..+++.|++|.+...   ......+.+|+.++++++|+|+     +++++++.+.+.++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~~~   75 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNI-----IAYYNHFMDDNTLL   75 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCe-----eEEEeEEecCCeEE
Confidence            689999999999999999999999999999988642   3445667899999999988777     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++.......+++..+..++.|++.||.|||+.|++|+||||+||+++.++.                
T Consensus        76 ~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~----------------  139 (256)
T cd08221          76 IEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGL----------------  139 (256)
T ss_pred             EEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCC----------------
Confidence            999999 999999998764457899999999999999999999999999999999999977664                


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                 +||+|||.+.......   ....|+..|+|||.+.+..++.++|||||||++|+|++|..||...+..+
T Consensus       140 -----------~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~  208 (256)
T cd08221         140 -----------IKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN  208 (256)
T ss_pred             -----------EEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH
Confidence                       5556665554332221   23468899999999988888999999999999999999999998766555


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+..  +.++                                               ......+.++.++|.+||..
T Consensus       209 ~~~~~~~--~~~~-----------------------------------------------~~~~~~~~~~~~~i~~~l~~  239 (256)
T cd08221         209 LVVKIVQ--GNYT-----------------------------------------------PVVSVYSSELISLVHSLLQQ  239 (256)
T ss_pred             HHHHHHc--CCCC-----------------------------------------------CCccccCHHHHHHHHHHccc
Confidence            4443321  1110                                               01123466899999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 013678          406 DPAERLKAREALRHPFF  422 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f  422 (438)
                      ||.+|||+.++++|+|+
T Consensus       240 ~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         240 DPEKRPTADEVLDQPLL  256 (256)
T ss_pred             CcccCCCHHHHhhCcCC
Confidence            99999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=1.4e-42  Score=329.49  Aligned_cols=254  Identities=21%  Similarity=0.292  Sum_probs=195.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECC----------------CCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNE----------------KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGG  152 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~  152 (438)
                      .++|++.++||+|+||.||+|.+..                ++..||+|++...  ......+.+|+.++..++|+||  
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni--   81 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNI--   81 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCe--
Confidence            3689999999999999999997532                3457999998753  3345678899999999988877  


Q ss_pred             cceEEecceeccCCeEEEEEccC-CCCHHHHHHhcC-----------------CCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 013678          153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNS-----------------YRSFPIDLVRELGRQLLESVAFMHELR  214 (438)
Q Consensus       153 ~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-----------------~~~l~~~~~~~i~~qi~~aL~~LH~~~  214 (438)
                         +++++++.+.+..|+||||+ +++|.+++....                 ...+++..+..++.||+.||.|||++|
T Consensus        82 ---v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  158 (304)
T cd05096          82 ---IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN  158 (304)
T ss_pred             ---eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence               99999999999999999999 999999986532                 124677889999999999999999999


Q ss_pred             ceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHH
Q 013678          215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEV  289 (438)
Q Consensus       215 ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~  289 (438)
                      |+||||||+|||++.++.                           +||+|||++.......     ....++..|+|||+
T Consensus       159 ivH~dlkp~Nill~~~~~---------------------------~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~  211 (304)
T cd05096         159 FVHRDLATRNCLVGENLT---------------------------IKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWEC  211 (304)
T ss_pred             ccccCcchhheEEcCCcc---------------------------EEECCCccceecccCceeEecCcCCCCccccCHHH
Confidence            999999999999976654                           5666666554332211     12345778999999


Q ss_pred             HhCCCCCcchhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCC
Q 013678          290 ILGLGWNYPCDLWSVGCILVELCS--GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS  367 (438)
Q Consensus       290 ~~~~~~~~~~DiwSlG~il~ellt--g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (438)
                      +.+..++.++|||||||++|+|++  +..||...+..+....+........                             
T Consensus       212 ~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-----------------------------  262 (304)
T cd05096         212 ILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQG-----------------------------  262 (304)
T ss_pred             HhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhcc-----------------------------
Confidence            998889999999999999999987  5678877665554443322110000                             


Q ss_pred             hhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          368 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                                   .......+..++..+.+||.+||+.||++|||+.+|.+
T Consensus       263 -------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         263 -------------RQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             -------------ccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence                         00000112345678999999999999999999999954

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=8.4e-43  Score=324.72  Aligned_cols=253  Identities=26%  Similarity=0.463  Sum_probs=203.5

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-------hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      +|+..+.||+|+||.||++.+..+++.||+|++....       ...+.+.+|+.+++.++|+++     +++++++.+.
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~   75 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHI-----IRMLGATCED   75 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCce-----ehhhceeccC
Confidence            4788899999999999999999999999999986422       134677889999999998877     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      ++.++||||+ +++|.+++....  .+++..+..++.||+.||.|||++|++|+||||+||+++.++             
T Consensus        76 ~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~-------------  140 (268)
T cd06630          76 SHFNLFVEWMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTG-------------  140 (268)
T ss_pred             CeEEEEEeccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-------------
Confidence            9999999999 999999998654  689999999999999999999999999999999999996543             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC-------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                   ..++|+|||.+......       .....|+..|+|||.+.+..++.++|||||||++|+|++|..|
T Consensus       141 -------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p  207 (268)
T cd06630         141 -------------QRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPP  207 (268)
T ss_pred             -------------CEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCC
Confidence                         13677777766543321       1224678899999999888899999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |...........+.+.....                                             .........+.++.+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~~~  242 (268)
T cd06630         208 WNAEKHSNHLALIFKIASAT---------------------------------------------TAPSIPEHLSPGLRD  242 (268)
T ss_pred             CCCCCCcchHHHHHHHhccC---------------------------------------------CCCCCchhhCHHHHH
Confidence            96544322222221110000                                             000112235678999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCC
Q 013678          398 LLQGLLRYDPAERLKAREALRHPFFT  423 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~hp~f~  423 (438)
                      ++.+||+.||++|||+.++++||||+
T Consensus       243 ~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         243 VTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHHHHcCCCcccCcCHHHHhcCcccC
Confidence            99999999999999999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=4.9e-43  Score=324.57  Aligned_cols=249  Identities=24%  Similarity=0.398  Sum_probs=203.8

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      +|++.+.||.|+||.||+|.+..+++.||+|++....    ...+.+.+|+.++++++|+|+     +++++.+..+...
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~   75 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFL-----VNLWYSFQDEENM   75 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCCh-----HHHHHhhcCCCeE
Confidence            5899999999999999999999999999999997532    345678889999999998887     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+|+||||+||+++.++                
T Consensus        76 ~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~----------------  137 (258)
T cd05578          76 YLVVDLLLGGDLRYHLSQKV--KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQG----------------  137 (258)
T ss_pred             EEEEeCCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCC----------------
Confidence            9999999 999999998763  699999999999999999999999999999999999997665                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                 .++|+|||.+......  .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+...
T Consensus       138 -----------~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~  206 (258)
T cd05578         138 -----------HVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI  206 (258)
T ss_pred             -----------CEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH
Confidence                       4566666665543322  223467889999999998889999999999999999999999998765321


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ...........                                               ....+...+..+.++|.+||+.
T Consensus       207 ~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~i~~~l~~  239 (258)
T cd05578         207 RDQIRAKQETA-----------------------------------------------DVLYPATWSTEAIDAINKLLER  239 (258)
T ss_pred             HHHHHHHhccc-----------------------------------------------cccCcccCcHHHHHHHHHHccC
Confidence            11111100000                                               0111223457899999999999


Q ss_pred             CCCCCCCH--HHHhcCCCC
Q 013678          406 DPAERLKA--REALRHPFF  422 (438)
Q Consensus       406 dP~~Rpta--~ell~hp~f  422 (438)
                      ||.+|+++  +|+++||||
T Consensus       240 ~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         240 DPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             ChhHcCCccHHHHhcCCCC
Confidence            99999999  999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=2.6e-42  Score=332.96  Aligned_cols=281  Identities=25%  Similarity=0.430  Sum_probs=207.9

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC---
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR---  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~---  165 (438)
                      +..+|++.+.||.|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.++|+|+     +++++.+...   
T Consensus         3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i-----~~~~~~~~~~~~~   77 (342)
T cd07854           3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNI-----VKVYEVLGPSGSD   77 (342)
T ss_pred             cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcc-----hhhHhhhcccccc
Confidence            4578999999999999999999999999999999986533 334667889999999998887     8888766543   


Q ss_pred             -----------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 013678          166 -----------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  234 (438)
Q Consensus       166 -----------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  234 (438)
                                 ...|+||||++++|.+++...   .+++..++.++.||+.||.|||++||+||||||+||+++..+   
T Consensus        78 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~---  151 (342)
T cd07854          78 LTEDVGSLTELNSVYIVQEYMETDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTED---  151 (342)
T ss_pred             cccccccccccceEEEEeecccccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC---
Confidence                       368999999977999888643   589999999999999999999999999999999999996432   


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC------CcccccCCCcchhHHHhC-CCCCcchhHHHHHHH
Q 013678          235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCI  307 (438)
Q Consensus       235 l~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~i  307 (438)
                                             ..++|+|||.+......      .....++..|+|||++.+ ..++.++|||||||+
T Consensus       152 -----------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvi  208 (342)
T cd07854         152 -----------------------LVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCI  208 (342)
T ss_pred             -----------------------ceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHH
Confidence                                   24677777776543221      112367889999998765 457899999999999


Q ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhc
Q 013678          308 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH  387 (438)
Q Consensus       308 l~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (438)
                      +|+|++|+.||...+.......+..........................                    ...........
T Consensus       209 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~  268 (342)
T cd07854         209 FAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRND--------------------GGEPRRPLRDL  268 (342)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhc--------------------ccccCCCHHHH
Confidence            9999999999988777666555544332222111100000000000000                    00000001112


Q ss_pred             cCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       388 ~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      ....+.++.+||.+||+.||.+|||+.|+++||||+.
T Consensus       269 ~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~  305 (342)
T cd07854         269 LPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC  305 (342)
T ss_pred             ccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence            2356778999999999999999999999999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=1.3e-42  Score=326.07  Aligned_cols=237  Identities=14%  Similarity=0.163  Sum_probs=192.8

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecchhh----HHHHHHHHHHHHHHHhcCCCCcceEEecceecc----CCeEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY----REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY----RNHIC  169 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~----~~~~~  169 (438)
                      ..||+|+++.||+|..  +|+.||||+++.....    .+.+.+|+.++.+++|+||     +++++++.+    ...++
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-----v~~~g~~~~~~~~~~~~~   98 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNI-----LKIYGFIIDIVDDLPRLS   98 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCE-----EEEeeeEEecccCCCceE
Confidence            4689999999999986  6889999998754322    3567799999999999877     999998866    45789


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      +||||+ +|+|.+++....  .+++.....++.|++.||.|||+ .+++||||||+|||++.++                
T Consensus        99 lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~----------------  160 (283)
T PHA02988         99 LILEYCTRGYLREVLDKEK--DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENY----------------  160 (283)
T ss_pred             EEEEeCCCCcHHHHHhhCC--CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCC----------------
Confidence            999999 999999998754  68999999999999999999998 5999999999999997655                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                 .+||+|||++...........||..|+|||++.+  ..++.++|||||||++|||++|..||.+.+..+
T Consensus       161 -----------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~  229 (283)
T PHA02988        161 -----------KLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE  229 (283)
T ss_pred             -----------cEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH
Confidence                       4677777776654443344578899999999976  578999999999999999999999998776655


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+......+                                                ..+...++.+.+||.+||+.
T Consensus       230 ~~~~i~~~~~~~------------------------------------------------~~~~~~~~~l~~li~~cl~~  261 (283)
T PHA02988        230 IYDLIINKNNSL------------------------------------------------KLPLDCPLEIKCIVEACTSH  261 (283)
T ss_pred             HHHHHHhcCCCC------------------------------------------------CCCCcCcHHHHHHHHHHhcC
Confidence            444332211100                                                01123567899999999999


Q ss_pred             CCCCCCCHHHHhc
Q 013678          406 DPAERLKAREALR  418 (438)
Q Consensus       406 dP~~Rpta~ell~  418 (438)
                      ||++|||+.|+++
T Consensus       262 dp~~Rps~~ell~  274 (283)
T PHA02988        262 DSIKRPNIKEILY  274 (283)
T ss_pred             CcccCcCHHHHHH
Confidence            9999999999985

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=3.5e-42  Score=327.60  Aligned_cols=294  Identities=25%  Similarity=0.408  Sum_probs=215.5

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc--
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--  164 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--  164 (438)
                      ..++|++.++||+|+||.||+|.+..+++.||||++....   .......+|+.+++.++|+++     +++++++..  
T Consensus         6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   80 (311)
T cd07866           6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNV-----VPLIDMAVERP   80 (311)
T ss_pred             ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCc-----cchhhheeccc
Confidence            3578999999999999999999999999999999986432   123456789999999999888     888887643  


Q ss_pred             ------CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCc
Q 013678          165 ------RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  238 (438)
Q Consensus       165 ------~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df  238 (438)
                            ...+++||||+.++|.+.+.... ..+++..++.++.||+.||+|||++||+|+||||+||+++.++.++++||
T Consensus        81 ~~~~~~~~~~~lv~~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~df  159 (311)
T cd07866          81 DKSKRKRGSVYMVTPYMDHDLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADF  159 (311)
T ss_pred             ccccccCceEEEEEecCCcCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcC
Confidence                  33579999999888888876543 46999999999999999999999999999999999999988887777777


Q ss_pred             cccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCC
Q 013678          239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       239 ~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~p  317 (438)
                      |++..........            ..+. ...........++..|+|||.+.+. .++.++|||||||++|+|++|..|
T Consensus       160 g~~~~~~~~~~~~------------~~~~-~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~  226 (311)
T cd07866         160 GLARPYDGPPPNP------------KGGG-GGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPI  226 (311)
T ss_pred             ccchhccCCCccc------------ccCC-cccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCC
Confidence            6654322111100            0000 0000111234678899999988764 478999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+.+.......+....+.+++..+.........       ..+...             ...+..........+..+.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-------------~~~~~~~~~~~~~~~~~~~~  286 (311)
T cd07866         227 LQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGC-------EGVHSF-------------TNYPRTLEERFGKLGPEGLD  286 (311)
T ss_pred             CCCCCHHHHHHHHHHHhCCCChhhchhhhhcccc-------cccccC-------------CCCCccHHHHcccCChhHHH
Confidence            9998888888888777766554332221100000       000000             00000111122334568999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCC
Q 013678          398 LLQGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      ||.+||+.||++|||+.|+++||||
T Consensus       287 ~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         287 LLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             HHHHHcccCcccCcCHHHHhcCCCC
Confidence            9999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=2.5e-42  Score=323.68  Aligned_cols=249  Identities=25%  Similarity=0.404  Sum_probs=190.5

Q ss_pred             eeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEcc
Q 013678           99 KMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK  174 (438)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~  174 (438)
                      .||+|+||.||++.+..+++.||+|.+.+..    .......+|..++..+.+.  .|++++.+++++..++..++||||
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~lv~e~   78 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG--DCPFIVCMTYAFHTPDKLCFILDL   78 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhC--CCCcEeEEEEEEecCCeEEEEEec
Confidence            4899999999999999999999999986432    1123344555555554332  345669999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccC
Q 013678          175 L-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  253 (438)
Q Consensus       175 ~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~  253 (438)
                      + +++|.+++..+.  .+++..+..++.||+.||+|||++||+||||||+|||++.++                      
T Consensus        79 ~~~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~----------------------  134 (279)
T cd05633          79 MNGGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHG----------------------  134 (279)
T ss_pred             CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCC----------------------
Confidence            9 999999987654  699999999999999999999999999999999999997665                      


Q ss_pred             CCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 013678          254 LPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  331 (438)
Q Consensus       254 ~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~  331 (438)
                           .++|+|||++...... .....||..|+|||.+.+ ..++.++|||||||++|+|++|..||......... .+.
T Consensus       135 -----~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~~  208 (279)
T cd05633         135 -----HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EID  208 (279)
T ss_pred             -----CEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-HHH
Confidence                 4566666665433221 122468999999999874 56899999999999999999999999754321111 111


Q ss_pred             HHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCC
Q 013678          332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  411 (438)
Q Consensus       332 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  411 (438)
                      ......                                              ....+..++.++.++|.+||+.||++|+
T Consensus       209 ~~~~~~----------------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~  242 (279)
T cd05633         209 RMTLTV----------------------------------------------NVELPDSFSPELKSLLEGLLQRDVSKRL  242 (279)
T ss_pred             HHhhcC----------------------------------------------CcCCccccCHHHHHHHHHHhcCCHHHhc
Confidence            100000                                              0011234567899999999999999999


Q ss_pred             -----CHHHHhcCCCCCCC
Q 013678          412 -----KAREALRHPFFTRD  425 (438)
Q Consensus       412 -----ta~ell~hp~f~~~  425 (438)
                           |++|+++||||++-
T Consensus       243 ~~~~~~~~~~~~h~~~~~~  261 (279)
T cd05633         243 GCLGRGAQEVKEHVFFKGI  261 (279)
T ss_pred             CCCCCCHHHHHhCccccCC
Confidence                 69999999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=5.7e-43  Score=330.13  Aligned_cols=255  Identities=25%  Similarity=0.423  Sum_probs=205.4

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      +.|.....||+|+||.||++.+..++..||||.+.... ...+.+.+|+.+++.++|+|+     +++++.+..++..|+
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----i~~~~~~~~~~~~~l   96 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENV-----VDMYNSYLVGDELWV   96 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcH-----HHHHHheecCCeEEE
Confidence            45566678999999999999999999999999986433 344567889999999988877     999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||+ +++|.+++...   .+++..+..++.||+.||+|||++||+||||||+||+++.++                  
T Consensus        97 v~e~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~------------------  155 (292)
T cd06658          97 VMEFLEGGALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDG------------------  155 (292)
T ss_pred             EEeCCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC------------------
Confidence            99999 88999988543   589999999999999999999999999999999999997665                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                               .++|+|||++......   .....|+..|+|||.+.+..++.++|||||||++|||++|..||...+....
T Consensus       156 ---------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~  226 (292)
T cd06658         156 ---------RIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA  226 (292)
T ss_pred             ---------CEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                     4566666655432211   1234688999999999888899999999999999999999999987665544


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      +..+.......                                               .......+..+.++|.+||..|
T Consensus       227 ~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~li~~~l~~~  259 (292)
T cd06658         227 MRRIRDNLPPR-----------------------------------------------VKDSHKVSSVLRGFLDLMLVRE  259 (292)
T ss_pred             HHHHHhcCCCc-----------------------------------------------cccccccCHHHHHHHHHHccCC
Confidence            43332211100                                               0011234668899999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCCCC
Q 013678          407 PAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       407 P~~Rpta~ell~hp~f~~~~~~  428 (438)
                      |++|||++|+++||||......
T Consensus       260 P~~Rpt~~~il~~~~~~~~~~~  281 (292)
T cd06658         260 PSQRATAQELLQHPFLKLAGPP  281 (292)
T ss_pred             hhHCcCHHHHhhChhhhccCCc
Confidence            9999999999999999975443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-42  Score=324.16  Aligned_cols=276  Identities=34%  Similarity=0.595  Sum_probs=215.5

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      |++.+.||.|++|.||+|.+..+++.+++|.+....   .....+.+|+.+++.++|+++     +++++++.+++.+++
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~   75 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI-----IKLLDVFRHKGDLYL   75 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCc-----chHHHhhccCCCEEE
Confidence            578899999999999999999999999999986533   234677889999999998877     999999999999999


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       171 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      ||||+.++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++                   
T Consensus        76 v~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~-------------------  135 (283)
T cd05118          76 VFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEG-------------------  135 (283)
T ss_pred             EEeccCCCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCC-------------------
Confidence            99999779999887754 4789999999999999999999999999999999999997655                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                              .++|+|||.+.......   ....++..|+|||.+.+. .++.++|||||||++|+|++|+.||...+..+.
T Consensus       136 --------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~  207 (283)
T cd05118         136 --------VLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ  207 (283)
T ss_pred             --------cEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                    46667776665443322   224578889999999877 689999999999999999999999998888887


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      +..+....+......+..........     ....+..               .........+..+.++.+||.+||+.|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~l~~~  267 (283)
T cd05118         208 LFKIFRTLGTPDPEVWPKFTSLARNY-----KFSFPKK---------------AGMPLPKLFPNASPQALDLLSQMLHYD  267 (283)
T ss_pred             HHHHHHHcCCCchHhcccchhhhhhh-----hhhhccc---------------cccCHHHhhhhhCHHHHHHHHHHhccC
Confidence            77777666654433322211100000     0000000               000011122345789999999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 013678          407 PAERLKAREALRHPFF  422 (438)
Q Consensus       407 P~~Rpta~ell~hp~f  422 (438)
                      |.+||++.++++||||
T Consensus       268 P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         268 PHKRITAEQALAHPYF  283 (283)
T ss_pred             cccCcCHHHHhhCCCC
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-42  Score=319.80  Aligned_cols=252  Identities=27%  Similarity=0.420  Sum_probs=204.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      ++|++.+.||.|+||.||+|.+..+++.+|+|++.... ...+.+.+|+.+++.++|+++     +++++++.+++.+|+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~~~l   77 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNI-----VAYFGSYLRRDKLWI   77 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCCh-----hceEEEEEeCCEEEE
Confidence            57999999999999999999999999999999987533 245678899999999998887     999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      +|||+ +++|.+++.... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++                  
T Consensus        78 ~~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~------------------  138 (262)
T cd06613          78 VMEYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDG------------------  138 (262)
T ss_pred             EEeCCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCC------------------
Confidence            99999 889999987652 3699999999999999999999999999999999999997665                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC---CCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                               .++|+|||.+......   .....++..|+|||.+.+.   .++.++|||||||++|+|++|..||...+.
T Consensus       139 ---------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~  209 (262)
T cd06613         139 ---------DVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP  209 (262)
T ss_pred             ---------CEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence                     4566666665543221   2234678899999999877   788999999999999999999999987665


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      ......+.......+                                             .......++.++.+||.+||
T Consensus       210 ~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~~li~~~l  244 (262)
T cd06613         210 MRALFLISKSNFPPP---------------------------------------------KLKDKEKWSPVFHDFIKKCL  244 (262)
T ss_pred             HHHHHHHHhccCCCc---------------------------------------------cccchhhhhHHHHHHHHHHc
Confidence            544333221100000                                             00011233567899999999


Q ss_pred             ccCCCCCCCHHHHhcCCC
Q 013678          404 RYDPAERLKAREALRHPF  421 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~  421 (438)
                      ..||.+|||+.+++.|+|
T Consensus       245 ~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         245 TKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             CCChhhCCCHHHHhcCCC
Confidence            999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=2.2e-42  Score=319.73  Aligned_cols=250  Identities=26%  Similarity=0.416  Sum_probs=205.8

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +|++.+.||+|+||.||++.+..++..||+|.+....   ...+.+.+|+.+++.++|+|+     +++++.+......+
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i-----~~~~~~~~~~~~~~   75 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNI-----VTFFASFQENGRLF   75 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCCh-----hhhhheeccCCeEE
Confidence            5899999999999999999999999999999986532   344567789999999998887     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +|+||+ +++|.+++.......+++..+..++.|++.||.|||+++|+|+||||+||+++.++.                
T Consensus        76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~----------------  139 (257)
T cd08225          76 IVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGM----------------  139 (257)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCC----------------
Confidence            999999 999999998765456899999999999999999999999999999999999976532                


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                .++|+|||.+.......   ....|+..|+|||++.+..++.++|+|||||++|+|++|..||...+..+
T Consensus       140 ----------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~  209 (257)
T cd08225         140 ----------VAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ  209 (257)
T ss_pred             ----------eEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence                      35777777665543322   12368889999999988889999999999999999999999997665444


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+..  +..                                               .......+.++.++|.+||..
T Consensus       210 ~~~~~~~--~~~-----------------------------------------------~~~~~~~~~~~~~~i~~~l~~  240 (257)
T cd08225         210 LVLKICQ--GYF-----------------------------------------------APISPNFSRDLRSLISQLFKV  240 (257)
T ss_pred             HHHHHhc--ccC-----------------------------------------------CCCCCCCCHHHHHHHHHHhcc
Confidence            3322211  000                                               001123456899999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 013678          406 DPAERLKAREALRHPFF  422 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f  422 (438)
                      +|++|||+.|+++||||
T Consensus       241 ~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         241 SPRDRPSITSILKRPFL  257 (257)
T ss_pred             ChhhCcCHHHHhhCCCC
Confidence            99999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=2.3e-42  Score=321.43  Aligned_cols=255  Identities=23%  Similarity=0.368  Sum_probs=203.6

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ++|++.+.||.|+||+||+|.+..++..+|+|++....  .....+.+|+.+++.+.|+++     +++++.+...+..+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   75 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNV-----VKYYTSFVVGDELW   75 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCE-----EEEEEEEeeCCEEE
Confidence            46899999999999999999998899999999986432  345678899999999988777     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSY-RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      +|||++ +++|.+++..... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.               
T Consensus        76 iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~---------------  140 (267)
T cd06610          76 LVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGS---------------  140 (267)
T ss_pred             EEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCC---------------
Confidence            999999 9999999976432 46899999999999999999999999999999999999977664               


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCC-------CCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQ-------DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                  ++|+|||.+.....       ......|+..|+|||++... .++.++|+|||||++|+|++|..||.
T Consensus       141 ------------~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~  208 (267)
T cd06610         141 ------------VKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYS  208 (267)
T ss_pred             ------------EEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCcc
Confidence                        55555555433221       11234688999999999877 68999999999999999999999997


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      ..+...........   .+..                    ++.                     ......++..+.+||
T Consensus       209 ~~~~~~~~~~~~~~---~~~~--------------------~~~---------------------~~~~~~~~~~~~~li  244 (267)
T cd06610         209 KYPPMKVLMLTLQN---DPPS--------------------LET---------------------GADYKKYSKSFRKMI  244 (267)
T ss_pred             ccChhhhHHHHhcC---CCCC--------------------cCC---------------------ccccccccHHHHHHH
Confidence            65554333222111   0000                    000                     000124567899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCC
Q 013678          400 QGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      .+||..||++|||+.++++||||
T Consensus       245 ~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         245 SLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HHHcCCChhhCcCHHHHhhCCCC
Confidence            99999999999999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=2e-42  Score=324.90  Aligned_cols=258  Identities=22%  Similarity=0.434  Sum_probs=199.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHH-HHHHHhcCCCCcceEEecceeccCCeE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDV-LQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~-l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ++|++.+.||+|+||.||+|.+..+|+.||||.++...  ........|+.+ ++.+.|+|+     +++++++..++.+
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i-----v~~~~~~~~~~~~   75 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYT-----VTFYGALFREGDV   75 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCe-----eeeeEEEecCCcE
Confidence            36899999999999999999999999999999987532  223445556665 444455555     9999999999999


Q ss_pred             EEEEccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          169 CIVFEKLGPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      |+||||+.++|.+++...  ....+++..+..++.||+.||+|||++ +++||||||+||+++.++              
T Consensus        76 ~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~--------------  141 (283)
T cd06617          76 WICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNG--------------  141 (283)
T ss_pred             EEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC--------------
Confidence            999999988998888652  224689999999999999999999997 999999999999997655              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhC----CCCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILG----LGWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                   .+||+|||.+.......  ....|+..|+|||++.+    ..++.++|||||||++|+|++|+.||.
T Consensus       142 -------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~  208 (283)
T cd06617         142 -------------QVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYD  208 (283)
T ss_pred             -------------CEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCC
Confidence                         46677777665433221  22468889999999865    346889999999999999999999996


Q ss_pred             CCC-hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          320 THE-NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       320 ~~~-~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      ... ..+.+..+..  +..+                     ..                         ....++.++.+|
T Consensus       209 ~~~~~~~~~~~~~~--~~~~---------------------~~-------------------------~~~~~~~~l~~l  240 (283)
T cd06617         209 SWKTPFQQLKQVVE--EPSP---------------------QL-------------------------PAEKFSPEFQDF  240 (283)
T ss_pred             ccccCHHHHHHHHh--cCCC---------------------CC-------------------------CccccCHHHHHH
Confidence            422 2222221111  0000                     00                         011346789999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          399 LQGLLRYDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      |.+||..||++|||++++++||||.....+.
T Consensus       241 i~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~  271 (283)
T cd06617         241 VNKCLKKNYKERPNYPELLQHPFFELHLSKN  271 (283)
T ss_pred             HHHHccCChhhCcCHHHHhcCchhhhccccc
Confidence            9999999999999999999999999987653

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=2.7e-42  Score=320.61  Aligned_cols=246  Identities=19%  Similarity=0.316  Sum_probs=201.3

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      ..|.+.++||+|+||.||+|.+..+++.||+|++.........+.+|+.+++.+.|+++     +++++++...+.+++|
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv   80 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL-----VQLLGVCTREPPFYII   80 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCCh-----hheEEEEcCCCCcEEE
Confidence            45899999999999999999999999999999987665556778899999999988877     9999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||+ +++|.+++.......+++..++.++.|++.||+|||++||+||||||+||+++.++.                  
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~------------------  142 (263)
T cd05052          81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL------------------  142 (263)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCc------------------
Confidence            9999 999999998765557899999999999999999999999999999999999977664                  


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCCCc----ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQDHS----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  325 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~  325 (438)
                               ++|+|||.+........    ...++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..+
T Consensus       143 ---------~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~  213 (263)
T cd05052         143 ---------VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ  213 (263)
T ss_pred             ---------EEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence                     55555555544322211    1133567999999998899999999999999999998 999998766544


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+....                                                 ........+.++.++|.+||+.
T Consensus       214 ~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~~li~~cl~~  244 (263)
T cd05052         214 VYELLEKGY-------------------------------------------------RMERPEGCPPKVYELMRACWQW  244 (263)
T ss_pred             HHHHHHCCC-------------------------------------------------CCCCCCCCCHHHHHHHHHHccC
Confidence            433332110                                                 0011234567899999999999


Q ss_pred             CCCCCCCHHHHhc
Q 013678          406 DPAERLKAREALR  418 (438)
Q Consensus       406 dP~~Rpta~ell~  418 (438)
                      ||++|||+.++++
T Consensus       245 ~p~~Rp~~~~l~~  257 (263)
T cd05052         245 NPSDRPSFAEIHQ  257 (263)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999975

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.4e-43  Score=339.39  Aligned_cols=256  Identities=26%  Similarity=0.372  Sum_probs=217.3

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .-.+.|.+.+.||+|.|+.|.+|++..++..||||++.+..   .......+|+.+++.|+||||     |+++.+.+..
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnI-----vkl~~v~~t~  127 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNI-----VKLFSVIETE  127 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcce-----eeeeeeeeec
Confidence            34477999999999999999999999999999999997643   344557899999999999988     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      ..+|+||||+ +|.+++++.+++  .+.+..++.++.|+++|++|||+++|||||||.+|||++.               
T Consensus       128 ~~lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~---------------  190 (596)
T KOG0586|consen  128 ATLYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDE---------------  190 (596)
T ss_pred             ceeEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccc---------------
Confidence            9999999999 999999999887  6778999999999999999999999999999999999954               


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCC-CcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                  +..+||+|||++.+....  ..+.+|++.|.|||++.+..| ++.+|+||+|++||-|+.|..||.+.
T Consensus       191 ------------~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~  258 (596)
T KOG0586|consen  191 ------------NMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ  258 (596)
T ss_pred             ------------ccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc
Confidence                        446888999988776543  355799999999999999886 58999999999999999999999876


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +-.+.........                                                  ...+.-++.++.+||++
T Consensus       259 ~lk~Lr~rvl~gk--------------------------------------------------~rIp~~ms~dce~lLrk  288 (596)
T KOG0586|consen  259 NLKELRPRVLRGK--------------------------------------------------YRIPFYMSCDCEDLLRK  288 (596)
T ss_pred             ccccccchheeee--------------------------------------------------ecccceeechhHHHHHH
Confidence            5433222111100                                                  11122346689999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          402 LLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      +|..+|.+|++.+++.+|.|.......
T Consensus       289 ~lvl~Pskr~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  289 FLVLNPSKRGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             hhccCccccCCHHHhhhhcccchhhhh
Confidence            999999999999999999999887655

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-44  Score=338.69  Aligned_cols=234  Identities=24%  Similarity=0.361  Sum_probs=196.4

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-  175 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-  175 (438)
                      ++-||+|+.|.||+|+.  .++.||||+++.      .-..+|+-|++|+|+||     +.+.++|.....+||||||| 
T Consensus       129 LeWlGSGaQGAVF~Grl--~netVAVKKV~e------lkETdIKHLRkLkH~NI-----I~FkGVCtqsPcyCIiMEfCa  195 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRL--HNETVAVKKVRE------LKETDIKHLRKLKHPNI-----ITFKGVCTQSPCYCIIMEFCA  195 (904)
T ss_pred             hhhhccCcccceeeeec--cCceehhHHHhh------hhhhhHHHHHhccCcce-----eeEeeeecCCceeEEeeeccc
Confidence            46799999999999975  477899998752      23457889999999988     99999999999999999999 


Q ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCC
Q 013678          176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  255 (438)
Q Consensus       176 ~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~  255 (438)
                      .|.|+.+|+...  .++......|..+|+.|+.|||.+.|||||||.-||||..+.                        
T Consensus       196 ~GqL~~VLka~~--~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d------------------------  249 (904)
T KOG4721|consen  196 QGQLYEVLKAGR--PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDD------------------------  249 (904)
T ss_pred             cccHHHHHhccC--ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccc------------------------
Confidence            999999998765  899999999999999999999999999999999999997765                        


Q ss_pred             CCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 013678          256 KSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  333 (438)
Q Consensus       256 ~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~  333 (438)
                         .|||+|||.++......  -.++||..|||||++.+.+.+.|+|||||||||||||||..||...+..-++.-+   
T Consensus       250 ---~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGV---  323 (904)
T KOG4721|consen  250 ---VVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGV---  323 (904)
T ss_pred             ---eEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEec---
Confidence               57888888877654432  3379999999999999999999999999999999999999999764432221110   


Q ss_pred             hCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCH
Q 013678          334 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  413 (438)
Q Consensus       334 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  413 (438)
                                                                   ....+....+..+++.++-||++||+-.|..||++
T Consensus       324 ---------------------------------------------GsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSF  358 (904)
T KOG4721|consen  324 ---------------------------------------------GSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSF  358 (904)
T ss_pred             ---------------------------------------------cCCcccccCcccCchHHHHHHHHHHhcCCCCCccH
Confidence                                                         01112233455678889999999999999999999


Q ss_pred             HHHhcCC
Q 013678          414 REALRHP  420 (438)
Q Consensus       414 ~ell~hp  420 (438)
                      .++|.|-
T Consensus       359 rqil~Hl  365 (904)
T KOG4721|consen  359 RQILLHL  365 (904)
T ss_pred             HHHHHHH
Confidence            9999984

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=3e-42  Score=320.82  Aligned_cols=248  Identities=29%  Similarity=0.430  Sum_probs=196.3

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch------hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc--
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--  164 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--  164 (438)
                      +|++.+.||+|+||.||+|.+..++..||+|++....      .....+.+|+.+++.++|+|+     +++++++.+  
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   77 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERI-----VQYYGCLRDRA   77 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCe-----eeEEEEEEcCC
Confidence            5889999999999999999999999999999886421      233567789999999998887     999998765  


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      +..++++|||+ +++|.+++....  .+++..++.++.||+.||+|||+++|+||||||+||+++.++.           
T Consensus        78 ~~~~~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~-----------  144 (266)
T cd06651          78 EKTLTIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGN-----------  144 (266)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCC-----------
Confidence            46889999999 899999998654  6899999999999999999999999999999999999976654           


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCC------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                      ++|+|||++......      .....++..|+|||.+.+..++.++|||||||++|+|++|+.|
T Consensus       145 ----------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~p  208 (266)
T cd06651         145 ----------------VKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPP  208 (266)
T ss_pred             ----------------EEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCC
Confidence                            556666655432211      1123578899999999988899999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |...........+... +..                                               ...+...++.+.+
T Consensus       209 f~~~~~~~~~~~~~~~-~~~-----------------------------------------------~~~~~~~~~~~~~  240 (266)
T cd06651         209 WAEYEAMAAIFKIATQ-PTN-----------------------------------------------PQLPSHISEHARD  240 (266)
T ss_pred             ccccchHHHHHHHhcC-CCC-----------------------------------------------CCCchhcCHHHHH
Confidence            9765443322221110 000                                               0011234567888


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCC
Q 013678          398 LLQGLLRYDPAERLKAREALRHPFFT  423 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~hp~f~  423 (438)
                      +| +||..||++|||++|+++||||+
T Consensus       241 li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         241 FL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             HH-HHhcCChhhCcCHHHHhcCcccc
Confidence            88 67778999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=3.9e-42  Score=326.05  Aligned_cols=283  Identities=30%  Similarity=0.513  Sum_probs=214.4

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      ++...++|++.+.||+|+||.||+|.+..+++.||+|+++...   .....+.+|+.+++.++|+|+     +++++++.
T Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i-----~~~~~~~~   76 (302)
T cd07864           2 GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNI-----VNLKEIVT   76 (302)
T ss_pred             chhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCe-----eeeeheec
Confidence            3455678999999999999999999999999999999986432   233566789999999988877     99998887


Q ss_pred             cCC----------eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccc
Q 013678          164 YRN----------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  233 (438)
Q Consensus       164 ~~~----------~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~  233 (438)
                      +..          .+|+||||+.++|.+++.... ..+++..++.++.||+.||+|||+.||+|+||||+||+++.++  
T Consensus        77 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~--  153 (302)
T cd07864          77 DKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGL-VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKG--  153 (302)
T ss_pred             CcchhhhccccCCcEEEEEcccCccHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--
Confidence            544          899999999778888887543 4689999999999999999999999999999999999997665  


Q ss_pred             ccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCC-CCCcchhHHHHHHHH
Q 013678          234 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCIL  308 (438)
Q Consensus       234 kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il  308 (438)
                                               .+||+|||.+.......    ....++..|+|||.+.+. .++.++|||||||++
T Consensus       154 -------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~  208 (302)
T cd07864         154 -------------------------QIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL  208 (302)
T ss_pred             -------------------------cEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHH
Confidence                                     45666666555432211    123457789999988754 478999999999999


Q ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhcc
Q 013678          309 VELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  388 (438)
Q Consensus       309 ~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (438)
                      |+|++|+.||...+..+.+..+.+..+..+...+.......          .+......+          ..........
T Consensus       209 ~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~----------~~~~~~~~~~  268 (302)
T cd07864         209 GELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLP----------YFNTMKPKK----------QYRRRLREEF  268 (302)
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccc----------ccccccccc----------ccccchhhhc
Confidence            99999999999888888888888776655543221111000          000000000          0000111122


Q ss_pred             CCchhHHHHHHHHccccCCCCCCCHHHHhcCCCC
Q 013678          389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       389 ~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      ...+..+.++|.+||+.||++|||+.+++.||||
T Consensus       269 ~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         269 SFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             CCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence            3457789999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=3e-42  Score=318.67  Aligned_cols=246  Identities=27%  Similarity=0.419  Sum_probs=201.7

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      +|++.++||+|+||.||++.+..+++.||+|.++..  ....+.+.+|+.+++.++|+|+     +++++.+.+++.+|+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~l   75 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNI-----VAFKESFEADGHLYI   75 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEEECCEEEE
Confidence            588999999999999999999999999999998642  3345667789999999988877     999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||+ +++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++                  
T Consensus        76 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~------------------  137 (255)
T cd08219          76 VMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNG------------------  137 (255)
T ss_pred             EEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCC------------------
Confidence            99999 89999998765555689999999999999999999999999999999999997665                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                               .++|+|||.+......   .....|+..|+|||++.+..++.++||||||+++|+|++|..||...+....
T Consensus       138 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~  208 (255)
T cd08219         138 ---------KVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL  208 (255)
T ss_pred             ---------cEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH
Confidence                     4566666665543222   1234688899999999988899999999999999999999999987655444


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      ...+...  ..+                                               ..+..++..+.+||.+||+.|
T Consensus       209 ~~~~~~~--~~~-----------------------------------------------~~~~~~~~~~~~li~~~l~~~  239 (255)
T cd08219         209 ILKVCQG--SYK-----------------------------------------------PLPSHYSYELRSLIKQMFKRN  239 (255)
T ss_pred             HHHHhcC--CCC-----------------------------------------------CCCcccCHHHHHHHHHHHhCC
Confidence            3333211  000                                               011234567899999999999


Q ss_pred             CCCCCCHHHHhcC
Q 013678          407 PAERLKAREALRH  419 (438)
Q Consensus       407 P~~Rpta~ell~h  419 (438)
                      |++|||+.++++-
T Consensus       240 P~~Rp~~~~il~~  252 (255)
T cd08219         240 PRSRPSATTILSR  252 (255)
T ss_pred             cccCCCHHHHhhc
Confidence            9999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.7e-42  Score=325.62  Aligned_cols=258  Identities=26%  Similarity=0.417  Sum_probs=205.9

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      .+|++++.||+|+||+||++.+..+++.||+|++...  ....+.+.+|+.++..++|+|+     +++++++...+.++
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~   79 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYI-----VSFYGAFLNENNIC   79 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCc-----ceEeeeEecCCEEE
Confidence            5789999999999999999999999999999988643  3345678899999999988887     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      +||||+ +++|.+++...+  .+++..+..++.|++.||.|||+ ++|+||||||+||+++.++                
T Consensus        80 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~----------------  141 (284)
T cd06620          80 MCMEFMDCGSLDRIYKKGG--PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG----------------  141 (284)
T ss_pred             EEEecCCCCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC----------------
Confidence            999999 899999987754  68999999999999999999997 6999999999999997655                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCC-CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                                 .++|+|||++..... ......|+..|+|||++.+..++.++|||||||++|++++|..||........
T Consensus       142 -----------~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~  210 (284)
T cd06620         142 -----------QIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDD  210 (284)
T ss_pred             -----------cEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhh
Confidence                       466667766543321 12235789999999999888899999999999999999999999976543211


Q ss_pred             --------HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          327 --------LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       327 --------~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                              ...+.......+                                          +.   ......+.++.+|
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~------------------------------------------~~---~~~~~~~~~~~~l  245 (284)
T cd06620         211 GQDDPMGILDLLQQIVQEPP------------------------------------------PR---LPSSDFPEDLRDF  245 (284)
T ss_pred             hhhhhhHHHHHHHHHhhccC------------------------------------------CC---CCchhcCHHHHHH
Confidence                    000000000000                                          00   0001245688999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          399 LQGLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      |.+||+.||++|||+.|+++|+||.+....
T Consensus       246 i~~~l~~dp~~Rpt~~e~~~~~~~~~~~~~  275 (284)
T cd06620         246 VDACLLKDPTERPTPQQLCAMPPFIQALRA  275 (284)
T ss_pred             HHHHhcCCcccCcCHHHHhcCccccccccc
Confidence            999999999999999999999999776543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=5.5e-42  Score=318.84  Aligned_cols=249  Identities=29%  Similarity=0.446  Sum_probs=197.4

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch------hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc-
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-  164 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-  164 (438)
                      .+|++.+.||+|+||.||+|.+..+++.||||.+....      ...+.+.+|+.+++.+.|+++     +++++++.+ 
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~   76 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERI-----VQYYGCLRDP   76 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCe-----eeEEeEeccC
Confidence            46899999999999999999999999999999885321      223567789999999988877     999998875 


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          165 -RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       165 -~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                       ...+++||||+ +++|.+++....  .+++..+..++.|++.||+|||++||+|+||||+||+++.++.          
T Consensus        77 ~~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~----------  144 (265)
T cd06652          77 MERTLSIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGN----------  144 (265)
T ss_pred             CCceEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCC----------
Confidence             35789999999 899999998654  6899999999999999999999999999999999999977665          


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCC------CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~  316 (438)
                                       ++|+|||.+.....      ......|+..|+|||++.+..++.++|||||||++|+|++|+.
T Consensus       145 -----------------~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~  207 (265)
T cd06652         145 -----------------VKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKP  207 (265)
T ss_pred             -----------------EEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCC
Confidence                             45555555443211      1122468889999999988889999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||...........+.   ....                                             ....+...+..+.
T Consensus       208 p~~~~~~~~~~~~~~---~~~~---------------------------------------------~~~~~~~~~~~~~  239 (265)
T cd06652         208 PWAEFEAMAAIFKIA---TQPT---------------------------------------------NPVLPPHVSDHCR  239 (265)
T ss_pred             CCCccchHHHHHHHh---cCCC---------------------------------------------CCCCchhhCHHHH
Confidence            997654433322211   1000                                             0001123456789


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCC
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFFT  423 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f~  423 (438)
                      ++|.+||. +|++|||++|+++|||+.
T Consensus       240 ~~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         240 DFLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             HHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence            99999995 999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.1e-44  Score=325.11  Aligned_cols=253  Identities=26%  Similarity=0.405  Sum_probs=216.9

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ...|..+..||+|+||.|.+|..+.+.+.||||++++.    ....+..+.|-++|.....+    |.+++++..|+.-+
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kp----pFL~qlHScFQTmD  423 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKP----PFLVQLHSCFQTMD  423 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCC----chHHHHHHHhhhhh
Confidence            36788999999999999999999999999999999863    23345566788887766554    56799999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      .+|+||||+ ||+|.-.+++-+  .+.+..+..++..|+-||-+||++|||.||||.+|||++.+|              
T Consensus       424 RLyFVMEyvnGGDLMyhiQQ~G--kFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eG--------------  487 (683)
T KOG0696|consen  424 RLYFVMEYVNGGDLMYHIQQVG--KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG--------------  487 (683)
T ss_pred             heeeEEEEecCchhhhHHHHhc--ccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCC--------------
Confidence            999999999 999999998876  799999999999999999999999999999999999998777              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCccc---CCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFE---HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                   ++||+|||++...   +....+++||+.|+|||++.-++|+.++|+||+||+||||+.|++||.+.+
T Consensus       488 -------------HiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD  554 (683)
T KOG0696|consen  488 -------------HIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED  554 (683)
T ss_pred             -------------ceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC
Confidence                         4666666666532   233455799999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ..+.+..|.+.--..|                                                  ...|.++.++++..
T Consensus       555 E~elF~aI~ehnvsyP--------------------------------------------------KslSkEAv~ickg~  584 (683)
T KOG0696|consen  555 EDELFQAIMEHNVSYP--------------------------------------------------KSLSKEAVAICKGL  584 (683)
T ss_pred             HHHHHHHHHHccCcCc--------------------------------------------------ccccHHHHHHHHHH
Confidence            9999988876544433                                                  34577899999999


Q ss_pred             cccCCCCCCC-----HHHHhcCCCCCCCC
Q 013678          403 LRYDPAERLK-----AREALRHPFFTRDV  426 (438)
Q Consensus       403 L~~dP~~Rpt-----a~ell~hp~f~~~~  426 (438)
                      |...|.+|..     -.+|-.||||+.-.
T Consensus       585 ltK~P~kRLGcg~~ge~di~~H~FFR~iD  613 (683)
T KOG0696|consen  585 LTKHPGKRLGCGPEGERDIREHPFFRRID  613 (683)
T ss_pred             hhcCCccccCCCCccccchhhCcchhhcc
Confidence            9999999985     47899999998643

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-42  Score=323.67  Aligned_cols=276  Identities=30%  Similarity=0.511  Sum_probs=212.0

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC--CeE
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--NHI  168 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~--~~~  168 (438)
                      |++.++||+|+||.||+|.+..+++.||+|++...   ......+.+|+.+++.+.|+++     +++++++...  +..
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~   75 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNI-----VRLKEIVTSKGKGSI   75 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCe-----eeheeeEecCCCCcE
Confidence            67899999999999999999999999999999764   2334567889999999988877     9999999887  899


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      ++||||+.++|.+++.... ..+++..++.++.||+.||+|||++|++|+||||+||+++.++.                
T Consensus        76 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~----------------  138 (287)
T cd07840          76 YMVFEYMDHDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGV----------------  138 (287)
T ss_pred             EEEeccccccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCC----------------
Confidence            9999999779999987653 46999999999999999999999999999999999999977664                


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                 ++|+|||.+......    .....++..|+|||.+.+. .++.++|||||||++|+|++|..||...+.
T Consensus       139 -----------~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~  207 (287)
T cd07840         139 -----------LKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE  207 (287)
T ss_pred             -----------EEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence                       556666655443322    1223567889999987654 578999999999999999999999998888


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC-chhHHHHHHHHc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH-SAGDLIDLLQGL  402 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ll~~~  402 (438)
                      ...+..+....+.++...+......           .+......         .............. ++..+.++|.+|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~  267 (287)
T cd07840         208 LEQLEKIFELCGSPTDENWPGVSKL-----------PWFENLKP---------KKPYKRRLREFFKHLIDPSALDLLDKL  267 (287)
T ss_pred             HHHHHHHHHHhCCCchhhccccccc-----------hhhhhccc---------cccchhHHHHHhcccCCHHHHHHHHHH
Confidence            7777777776665543322111000           00000000         00001111111222 377899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCC
Q 013678          403 LRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f  422 (438)
                      |+.||.+|||+.++++||||
T Consensus       268 l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         268 LTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             cCCChhhCcCHHHHhhCcCC
Confidence            99999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=1.2e-42  Score=325.52  Aligned_cols=254  Identities=26%  Similarity=0.418  Sum_probs=205.9

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ..|+.+++||.|+||.||+|.+..++..||+|++....  .....+.+|+.+++.+.|+++     +++++.+.+++..|
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~   78 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV-----TKYYGSYLKGTKLW   78 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEECCEEE
Confidence            46788999999999999999999999999999987432  334667889999999988777     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++...   .+++..+..++.|++.||+|||+.+++|+||+|+||+++.++.                
T Consensus        79 lv~e~~~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~----------------  139 (277)
T cd06640          79 IIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGD----------------  139 (277)
T ss_pred             EEEecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCC----------------
Confidence            999999 99999998753   5899999999999999999999999999999999999976654                


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                 ++|+|||++......   .....++..|+|||++.+..++.++|+|||||++|+|++|..||...+...
T Consensus       140 -----------~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~  208 (277)
T cd06640         140 -----------VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR  208 (277)
T ss_pred             -----------EEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh
Confidence                       566666655433221   122467889999999998889999999999999999999999997655443


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+...  ..                                               ......++..+.+||.+||+.
T Consensus       209 ~~~~~~~~--~~-----------------------------------------------~~~~~~~~~~~~~li~~~l~~  239 (277)
T cd06640         209 VLFLIPKN--NP-----------------------------------------------PTLTGEFSKPFKEFIDACLNK  239 (277)
T ss_pred             HhhhhhcC--CC-----------------------------------------------CCCchhhhHHHHHHHHHHccc
Confidence            32221100  00                                               001123456789999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          406 DPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      ||++||++.++++|+||.....+.
T Consensus       240 ~p~~Rp~~~~il~~~~~~~~~~~~  263 (277)
T cd06640         240 DPSFRPTAKELLKHKFIVKNAKKT  263 (277)
T ss_pred             CcccCcCHHHHHhChHhhhcchhh
Confidence            999999999999999998876553

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=5.2e-42  Score=322.06  Aligned_cols=277  Identities=32%  Similarity=0.575  Sum_probs=215.7

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh--hHHHHHHHHHHHHHHH-hcCCCCcceEEecceeccCCeEEE
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      |++.+.||+|+||.||+|.+..+++.||||.+.....  ......+|+..+.++. |+++     +++++++..++..++
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----~~~~~~~~~~~~~~l   75 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNI-----VKLKEVFRENDELYF   75 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCc-----hhHHHHhhcCCcEEE
Confidence            6788999999999999999998999999999864322  2234456888888888 7776     999999999999999


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       171 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      ||||++++|.+++.......+++..+..++.|++.||.|||++||+|+||||+||+++.++                   
T Consensus        76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~-------------------  136 (283)
T cd07830          76 VFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPE-------------------  136 (283)
T ss_pred             EEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC-------------------
Confidence            9999988999999876545789999999999999999999999999999999999997655                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  327 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~  327 (438)
                              .++|+|||.+.......  ....++..|+|||++.+. .++.++||||||+++|+|++|..||...+..+..
T Consensus       137 --------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~  208 (283)
T cd07830         137 --------VVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQL  208 (283)
T ss_pred             --------CEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHH
Confidence                    56777777665543322  234678899999988644 5789999999999999999999999998888888


Q ss_pred             HHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCC
Q 013678          328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  407 (438)
Q Consensus       328 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  407 (438)
                      ..+...++.++...+..........     ...++...               ...........+..+.+||.+||+.||
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---------------~~~~~~~~~~~~~~~~~li~~cl~~~p  268 (283)
T cd07830         209 YKICSVLGTPTKQDWPEGYKLASKL-----GFRFPQFA---------------PTSLHQLIPNASPEAIDLIKDMLRWDP  268 (283)
T ss_pred             HHHHHhcCCCChhhhhhHhhhhccc-----cccccccc---------------cccHHHHcccCCHHHHHHHHHhcccCc
Confidence            8888888777654433322111100     00000000               000011122336789999999999999


Q ss_pred             CCCCCHHHHhcCCCC
Q 013678          408 AERLKAREALRHPFF  422 (438)
Q Consensus       408 ~~Rpta~ell~hp~f  422 (438)
                      ++|||++|++.||||
T Consensus       269 ~~Rpt~~ei~~~~~~  283 (283)
T cd07830         269 KKRPTASQALQHPYF  283 (283)
T ss_pred             ccCCCHHHHhhCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=2.3e-42  Score=323.59  Aligned_cols=248  Identities=25%  Similarity=0.425  Sum_probs=198.2

Q ss_pred             eeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678          100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      ||+|+||+||+|.+..+|+.||+|++....    .....+.+|+.+++.++|+++     +++++++...+..|+||||+
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFI-----VSLAYAFETKDDLCLVMTLM   75 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCE-----eeeeeEEecCCeEEEEEecC
Confidence            689999999999999999999999986432    223456789999999988776     99999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCC
Q 013678          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  254 (438)
Q Consensus       176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~  254 (438)
                       +++|.+++.......+++..+..++.|++.||.|||++||+||||+|+||+++.++                       
T Consensus        76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~-----------------------  132 (277)
T cd05577          76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHG-----------------------  132 (277)
T ss_pred             CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC-----------------------
Confidence             89999999876545799999999999999999999999999999999999997655                       


Q ss_pred             CCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 013678          255 PKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER  332 (438)
Q Consensus       255 ~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~  332 (438)
                          .++|+|||.+......  .....++..|+|||++.+..++.++|||||||++|+|++|..||...........+..
T Consensus       133 ----~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  208 (277)
T cd05577         133 ----NVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR  208 (277)
T ss_pred             ----CEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh
Confidence                4666666666543221  1224678899999999888899999999999999999999999976543221111111


Q ss_pred             HhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCC-
Q 013678          333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL-  411 (438)
Q Consensus       333 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp-  411 (438)
                      ..-.                                              .........++++.++|.+||+.||++|| 
T Consensus       209 ~~~~----------------------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~  242 (277)
T cd05577         209 RTLE----------------------------------------------MAVEYPDKFSPEAKDLCEALLQKDPEKRLG  242 (277)
T ss_pred             cccc----------------------------------------------ccccCCccCCHHHHHHHHHHccCChhHccC
Confidence            0000                                              00112234577899999999999999999 


Q ss_pred             ----CHHHHhcCCCCCCC
Q 013678          412 ----KAREALRHPFFTRD  425 (438)
Q Consensus       412 ----ta~ell~hp~f~~~  425 (438)
                          ++.++++||||++-
T Consensus       243 ~~~~~~~~ll~h~~~~~~  260 (277)
T cd05577         243 CRGGSADEVREHPLFKDL  260 (277)
T ss_pred             CCcccHHHHHhChhhhcC
Confidence                89999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=1.8e-42  Score=337.54  Aligned_cols=247  Identities=23%  Similarity=0.330  Sum_probs=192.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCC-----CcEEEEEEeecc--hhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceec
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~  163 (438)
                      ++|++.+.||+|+||.||+|++..+     +..||+|+++..  ....+.+.+|+.+++.+ .|+||     +++++++.
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nI-----v~~~~~~~  112 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNI-----VNLLGACT  112 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCce-----eeEeeEec
Confidence            5799999999999999999986443     357999998753  23345678899999999 77777     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcC-------------------------------------------------------
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNS-------------------------------------------------------  187 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~-------------------------------------------------------  187 (438)
                      ..+.+|+||||| +|+|.+++....                                                       
T Consensus       113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (374)
T cd05106         113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS  192 (374)
T ss_pred             CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence            999999999999 999999986431                                                       


Q ss_pred             -------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCC
Q 013678          188 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  254 (438)
Q Consensus       188 -------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~  254 (438)
                                   ...+++..+..++.||+.||.|||++||+||||||+|||++.++.                      
T Consensus       193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~----------------------  250 (374)
T cd05106         193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRV----------------------  250 (374)
T ss_pred             ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCe----------------------
Confidence                         124788889999999999999999999999999999999976654                      


Q ss_pred             CCCCCeEEecCCCCcccCCCCc-----ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 013678          255 PKSSAIKLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA  328 (438)
Q Consensus       255 ~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~  328 (438)
                           ++|+|||++........     ...++..|+|||++.+..++.++|||||||++|+|++ |..||..........
T Consensus       251 -----~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~  325 (374)
T cd05106         251 -----AKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFY  325 (374)
T ss_pred             -----EEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHH
Confidence                 55566665543322111     1234567999999998899999999999999999997 999997654333222


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+.....                                                ........++++.++|.+||+.||+
T Consensus       326 ~~~~~~~------------------------------------------------~~~~~~~~~~~l~~li~~cl~~dp~  357 (374)
T cd05106         326 KMVKRGY------------------------------------------------QMSRPDFAPPEIYSIMKMCWNLEPT  357 (374)
T ss_pred             HHHHccc------------------------------------------------CccCCCCCCHHHHHHHHHHcCCChh
Confidence            2211000                                                0001123467899999999999999


Q ss_pred             CCCCHHHHhc
Q 013678          409 ERLKAREALR  418 (438)
Q Consensus       409 ~Rpta~ell~  418 (438)
                      +|||+.++++
T Consensus       358 ~RPs~~~l~~  367 (374)
T cd05106         358 ERPTFSQISQ  367 (374)
T ss_pred             hCcCHHHHHH
Confidence            9999999975

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=3.1e-42  Score=320.76  Aligned_cols=245  Identities=21%  Similarity=0.280  Sum_probs=195.4

Q ss_pred             CceEEEeeeeeecceEEEEEEEC---CCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      .+|++.+.||+|+||.||+|.+.   ..+..||+|.++...  .....+.+|+.++..++|+|+     +++++++..++
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~   79 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNI-----VRLEGVITRGN   79 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCc-----CeEEEEEecCC
Confidence            57999999999999999999765   446789999987542  334567889999999988877     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      +.++||||+ +++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+|||++.++.+++          
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l----------  148 (266)
T cd05064          80 TMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKI----------  148 (266)
T ss_pred             CcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEE----------
Confidence            999999999 889999997653 46899999999999999999999999999999999999977665544          


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQT  320 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~  320 (438)
                                       +|||.+.......    ....++..|+|||.+.+..++.++|||||||++||+++ |..||..
T Consensus       149 -----------------~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~  211 (266)
T cd05064         149 -----------------SGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWD  211 (266)
T ss_pred             -----------------CCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCc
Confidence                             4554433221111    11234678999999999999999999999999999775 9999987


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      .+..+....+.....                                                 ...+..++..+.+++.
T Consensus       212 ~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~li~  242 (266)
T cd05064         212 MSGQDVIKAVEDGFR-------------------------------------------------LPAPRNCPNLLHQLML  242 (266)
T ss_pred             CCHHHHHHHHHCCCC-------------------------------------------------CCCCCCCCHHHHHHHH
Confidence            766554444322110                                                 0112345668999999


Q ss_pred             HccccCCCCCCCHHHHhc
Q 013678          401 GLLRYDPAERLKAREALR  418 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~  418 (438)
                      +||+.||.+|||++++++
T Consensus       243 ~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         243 DCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HHcCCCchhCCCHHHHHH
Confidence            999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-43  Score=332.93  Aligned_cols=269  Identities=23%  Similarity=0.312  Sum_probs=207.7

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      .+...+...+.+.||+|+||+||+|++.  | .||||+++-   .....+.|.+|+.++++-+|.||     +-+.|++.
T Consensus       387 WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NI-----lLFMG~~~  458 (678)
T KOG0193|consen  387 WEIPPEEVLLGERIGSGSFGTVYRGRWH--G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENI-----LLFMGACM  458 (678)
T ss_pred             cccCHHHhhccceeccccccceeecccc--c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhh-----eeeehhhc
Confidence            3344566678899999999999999865  3 399999974   34567889999999999999998     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      .... .||+.+| |.+|+.+++... ..|.+...+.|++||++|+.|||.++|||||||..||++.+++           
T Consensus       459 ~p~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~-----------  525 (678)
T KOG0193|consen  459 NPPL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDL-----------  525 (678)
T ss_pred             CCce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCC-----------
Confidence            8777 9999999 889999998654 5799999999999999999999999999999999999997665           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCC-----CCcccccCCCcchhHHHhC---CCCCcchhHHHHHHHHHHHHhC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg  314 (438)
                                      .|||+|||++.....     ......|...|||||++..   .+|++.+|||||||++|||++|
T Consensus       526 ----------------kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg  589 (678)
T KOG0193|consen  526 ----------------KVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTG  589 (678)
T ss_pred             ----------------cEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhC
Confidence                            566666666643221     1122357789999999984   3699999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      ..||......+++.++-+..+.+                                             ...........+
T Consensus       590 ~lPysi~~~dqIifmVGrG~l~p---------------------------------------------d~s~~~s~~pk~  624 (678)
T KOG0193|consen  590 ELPYSIQNRDQIIFMVGRGYLMP---------------------------------------------DLSKIRSNCPKA  624 (678)
T ss_pred             cCCcCCCChhheEEEecccccCc---------------------------------------------cchhhhccCHHH
Confidence            99999544444333332211100                                             001122345668


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhc--------CCCCCCCCCCceeeeecCC
Q 013678          395 LIDLLQGLLRYDPAERLKAREALR--------HPFFTRDVRRPTLLVATGE  437 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~--------hp~f~~~~~~~~~~~~~~~  437 (438)
                      +++|+..||.+++++||++.+||.        -|=+.+..+.|.++-...|
T Consensus       625 mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pki~RS~S~P~~~~~~~~  675 (678)
T KOG0193|consen  625 MKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPKINRSASEPVLLRSSAE  675 (678)
T ss_pred             HHHHHHHHHhcCcccCccHHHHHHHHHHhhhcccccccCcCccchhhhhhh
Confidence            999999999999999999988877        3555555555555544443

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=4.9e-42  Score=321.46  Aligned_cols=270  Identities=27%  Similarity=0.376  Sum_probs=211.5

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHH-hcCCCCcceEEecceeccCC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ++|.+.+.||+|+||.||+|.+..+++.||+|++...    ......+.+|+.++..+. |+|+     +++++++.+.+
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i-----~~~~~~~~~~~   75 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGI-----IKLYYTFQDEE   75 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCc-----hhHHHHhcCCc
Confidence            3689999999999999999999999999999998652    233456778999999988 7766     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ..++|||++ +++|.+++.+..  .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++++|||++....
T Consensus        76 ~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~  153 (280)
T cd05581          76 NLYFVLEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLD  153 (280)
T ss_pred             eEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence            999999999 999999998764  79999999999999999999999999999999999999988888888887765443


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                      ..........    ....++..............++..|+|||++.+..++.++|||||||+++++++|..||...+...
T Consensus       154 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~  229 (280)
T cd05581         154 PNSSPESNKG----DATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL  229 (280)
T ss_pred             CccccccCCC----CCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence            2221100000    000111111111122233567889999999988889999999999999999999999998766544


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..+.....                                                  ..+..+++.+.+||.+||+.
T Consensus       230 ~~~~~~~~~~--------------------------------------------------~~~~~~~~~~~~li~~~l~~  259 (280)
T cd05581         230 TFQKILKLEY--------------------------------------------------SFPPNFPPDAKDLIEKLLVL  259 (280)
T ss_pred             HHHHHHhcCC--------------------------------------------------CCCCccCHHHHHHHHHHhcC
Confidence            3333322111                                                  11223466899999999999


Q ss_pred             CCCCCCCH----HHHhcCCCC
Q 013678          406 DPAERLKA----REALRHPFF  422 (438)
Q Consensus       406 dP~~Rpta----~ell~hp~f  422 (438)
                      ||++|||+    +++++||||
T Consensus       260 ~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         260 DPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             CHhhCCCcccCHHHHhcCCCC
Confidence            99999999    999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.7e-42  Score=317.78  Aligned_cols=247  Identities=26%  Similarity=0.454  Sum_probs=192.6

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecchhh----HHHHHHHHHHHH-HHHhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY----REAAMIEIDVLQ-RLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~E~~~l~-~l~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +.||+|+||.||+|.+..+++.||+|++.+....    ......|..++. .+.|+     |++++++++..++.+|+||
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-----~i~~~~~~~~~~~~~~lv~   76 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESP-----YVAKLYYSFQSKDYLYLVM   76 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCC-----CeeeeeeeEEcCCeEEEEE
Confidence            5789999999999999999999999998653221    122233433332 23444     5599999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||+|+||+++.++                    
T Consensus        77 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~--------------------  134 (260)
T cd05611          77 EYLNGGDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTG--------------------  134 (260)
T ss_pred             eccCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--------------------
Confidence            999 999999998754  689999999999999999999999999999999999997655                    


Q ss_pred             cCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  331 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~  331 (438)
                             .++|+|||.+..... .....|+..|+|||.+.+..++.++||||||+++|+|++|..||...+.......+.
T Consensus       135 -------~~~l~dfg~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~  206 (260)
T cd05611         135 -------HLKLTDFGLSRNGLE-NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNIL  206 (260)
T ss_pred             -------cEEEeecccceeccc-cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence                   466777776654332 223468889999999998888999999999999999999999998766554443332


Q ss_pred             HHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCC
Q 013678          332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  411 (438)
Q Consensus       332 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  411 (438)
                      ...                        ..++.                      .....++..+.++|.+||+.||++||
T Consensus       207 ~~~------------------------~~~~~----------------------~~~~~~~~~~~~~i~~~l~~~p~~R~  240 (260)
T cd05611         207 SRR------------------------INWPE----------------------EVKEFCSPEAVDLINRLLCMDPAKRL  240 (260)
T ss_pred             hcc------------------------cCCCC----------------------cccccCCHHHHHHHHHHccCCHHHcc
Confidence            210                        01110                      01123567899999999999999999


Q ss_pred             C---HHHHhcCCCCCCC
Q 013678          412 K---AREALRHPFFTRD  425 (438)
Q Consensus       412 t---a~ell~hp~f~~~  425 (438)
                      |   ++|+++||||++.
T Consensus       241 ~~~~~~~~l~~~~~~~~  257 (260)
T cd05611         241 GANGYQEIKSHPFFKSI  257 (260)
T ss_pred             CCCcHHHHHcChHhhcC
Confidence            5   5799999999764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=5e-42  Score=320.35  Aligned_cols=252  Identities=27%  Similarity=0.429  Sum_probs=199.3

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-----------hhHHHHHHHHHHHHHHHhcCCCCcceEEecce
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~  161 (438)
                      +|.+.+.||.|+||.||+|.+..+++.||+|.++...           ...+.+..|+.+++.++|+++     ++++++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~   76 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNI-----VQYLGF   76 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCc-----ceEEEE
Confidence            6889999999999999999999999999999885311           112456779999999988877     999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                      +...+..++||||+ +++|.+++....  .+++..++.++.||+.||.|||++|++||||||+||+++.++.        
T Consensus        77 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~--------  146 (272)
T cd06629          77 ETTEEYLSIFLEYVPGGSIGSCLRTYG--RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGI--------  146 (272)
T ss_pred             eccCCceEEEEecCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCe--------
Confidence            99999999999999 999999998764  7899999999999999999999999999999999999976664        


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCC--CCcchhHHHHHHHHHHHHh
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLG--WNYPCDLWSVGCILVELCS  313 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~ellt  313 (438)
                                         ++|+|||.+......     .....|+..|+|||.+....  ++.++|+||||+++|++++
T Consensus       147 -------------------~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~  207 (272)
T cd06629         147 -------------------CKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFA  207 (272)
T ss_pred             -------------------EEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHh
Confidence                               556666655433211     12246788999999988754  7899999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchh
Q 013678          314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  393 (438)
Q Consensus       314 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (438)
                      |..||...+.......+....                      ....++                      ......++.
T Consensus       208 g~~p~~~~~~~~~~~~~~~~~----------------------~~~~~~----------------------~~~~~~~~~  243 (272)
T cd06629         208 GRRPWSDEEAIAAMFKLGNKR----------------------SAPPIP----------------------PDVSMNLSP  243 (272)
T ss_pred             CCCCCcCcchHHHHHHhhccc----------------------cCCcCC----------------------ccccccCCH
Confidence            999996544433222111000                      000000                      011124567


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCC
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      .+.++|.+||..||++|||++++|+||||
T Consensus       244 ~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         244 VALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             HHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            89999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-41  Score=320.43  Aligned_cols=277  Identities=32%  Similarity=0.556  Sum_probs=207.7

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe---
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH---  167 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~---  167 (438)
                      |++.+.||+|+||.||+|++..+++.||+|.++...   .....+.+|+.+++.+.  .+.|++++++++++...+.   
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~h~~i~~~~~~~~~~~~~~~   78 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLE--SFEHPNIVRLLDVCHGPRTDRE   78 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhh--ccCCCCcceEEEEEeeccCCCC
Confidence            688999999999999999998889999999986422   22345667888888775  1223444999999887665   


Q ss_pred             --EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          168 --ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       168 --~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                        ++++|||++++|.+++.......+++..++.++.||+.||.|||++|++|+||||+||+++.++              
T Consensus        79 ~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~--------------  144 (287)
T cd07838          79 LKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDG--------------  144 (287)
T ss_pred             ceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCC--------------
Confidence              9999999977999998775544699999999999999999999999999999999999997655              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                   .++|+|||.+.......  ....++..|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus       145 -------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~  211 (287)
T cd07838         145 -------------QVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE  211 (287)
T ss_pred             -------------CEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh
Confidence                         56677777665543221  223578899999999998899999999999999999999999998888


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .+.+..+....+.....                   .|+.......   .... ..............+..+.+||.+||
T Consensus       212 ~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l  268 (287)
T cd07838         212 ADQLDKIFDVIGLPSEE-------------------EWPRNVSLPR---SSFP-SYTPRSFKSFVPEICEEGLDLLKKML  268 (287)
T ss_pred             HHHHHHHHHHcCCCChH-------------------hcCCCcccch---hhcc-cccccchhhhhhhhhHHHHHHHHHHh
Confidence            77777665544332211                   1111000000   0000 00000001112344678899999999


Q ss_pred             ccCCCCCCCHHHHhcCCCC
Q 013678          404 RYDPAERLKAREALRHPFF  422 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~f  422 (438)
                      +.||++||++.|+++||||
T Consensus       269 ~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         269 TFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             ccCCccCCCHHHHhcCcCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=1e-41  Score=327.55  Aligned_cols=279  Identities=27%  Similarity=0.460  Sum_probs=213.5

Q ss_pred             ceEEEeeeeeecceEEEEEEECCC--CcEEEEEEeecc---hhhHHHHHHHHHHHHHHH-hcCCCCcceEEecceec---
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEK--KELVAIKIVRSI---NKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD---  163 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~---  163 (438)
                      +|++.+.||+|+||.||++.+..+  +..||+|.+...   ....+.+.+|+.+++++. |+|+     +++++.+.   
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~~~~~~~   75 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNI-----TCLYDMDIVFP   75 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCCh-----heeeeeeeecc
Confidence            589999999999999999999888  889999998642   223456778999999984 7766     88887643   


Q ss_pred             -cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          164 -YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       164 -~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                       ....++++|||++++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+         
T Consensus        76 ~~~~~~~~~~e~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~---------  144 (332)
T cd07857          76 GNFNELYLYEELMEADLHQIIRSGQ--PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCEL---------  144 (332)
T ss_pred             ccCCcEEEEEecccCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCE---------
Confidence             235689999999889999987544  79999999999999999999999999999999999999776654         


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCC-------CCcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-------DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg  314 (438)
                                        +|+|||.+.....       ......||..|+|||.+.+ ..++.++|||||||++|+|++|
T Consensus       145 ------------------kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g  206 (332)
T cd07857         145 ------------------KICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGR  206 (332)
T ss_pred             ------------------EeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence                              5555554433211       1122478999999998876 4689999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccch-hhhhhccCCchh
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP-NLIMQHVDHSAG  393 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  393 (438)
                      ..||...+....+..+...+|.++..............+..                    .....+ ..........+.
T Consensus       207 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~  266 (332)
T cd07857         207 KPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIR--------------------SLPNIPKKPFESIFPNANP  266 (332)
T ss_pred             CcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHH--------------------hccccCCcchHhhCCCCCH
Confidence            99999988888899999988887765544332111100000                    000000 000111233467


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .+.+||.+||+.||++|||+.+++.||||++.
T Consensus       267 ~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         267 LALDLLEKLLAFDPTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence            89999999999999999999999999999755

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=2.8e-42  Score=320.23  Aligned_cols=244  Identities=28%  Similarity=0.435  Sum_probs=199.9

Q ss_pred             eeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678          100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      ||.|+||.||+|.+..+++.||+|++....    ...+.+.+|+.+++.++|+|+     +++++.+.+++.+|+||||+
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv~e~~   75 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFI-----VKLYRTFKDKKYIYMLMEYC   75 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCE-----eeeeeeEEcCCccEEEEecC
Confidence            699999999999999999999999987532    344668889999999988877     99999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCC
Q 013678          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  254 (438)
Q Consensus       176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~  254 (438)
                       +++|.+++.+..  .+++..+..++.||+.||+|||++|++|+||||+||+++.++                       
T Consensus        76 ~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~-----------------------  130 (262)
T cd05572          76 LGGELWTILRDRG--LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNG-----------------------  130 (262)
T ss_pred             CCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCC-----------------------
Confidence             999999998754  689999999999999999999999999999999999997655                       


Q ss_pred             CCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHH
Q 013678          255 PKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE--NLEHLAMM  330 (438)
Q Consensus       255 ~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~--~~~~~~~i  330 (438)
                          .++|+|||.+......  .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||....  .......+
T Consensus       131 ----~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  206 (262)
T cd05572         131 ----YVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDI  206 (262)
T ss_pred             ----CEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHH
Confidence                5677777776654332  223467889999999988889999999999999999999999997665  22222222


Q ss_pred             HHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCC
Q 013678          331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  410 (438)
Q Consensus       331 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  410 (438)
                      .....                      .                          ...+...+.++.++|.+||+.||++|
T Consensus       207 ~~~~~----------------------~--------------------------~~~~~~~~~~~~~~i~~~l~~~p~~R  238 (262)
T cd05572         207 LKGNG----------------------K--------------------------LEFPNYIDKAAKDLIKQLLRRNPEER  238 (262)
T ss_pred             hccCC----------------------C--------------------------CCCCcccCHHHHHHHHHHccCChhhC
Confidence            11000                      0                          01112335689999999999999999


Q ss_pred             CC-----HHHHhcCCCCCCC
Q 013678          411 LK-----AREALRHPFFTRD  425 (438)
Q Consensus       411 pt-----a~ell~hp~f~~~  425 (438)
                      +|     ++|+++||||++-
T Consensus       239 ~~~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         239 LGNLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             cCCcccCHHHHhcChhhhCC
Confidence            99     9999999999864

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=8.4e-42  Score=315.95  Aligned_cols=248  Identities=29%  Similarity=0.464  Sum_probs=202.2

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch------hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      +|+..+.||+|+||.||+|.+..+++.|++|.+....      ...+.+.+|+.+++.++|+++     +++++++....
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~   75 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNI-----VQYLGTEREED   75 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCc-----hheeeeEecCC
Confidence            5788899999999999999998899999999986432      244667889999999988887     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      .+++||||+ +++|.+++....  .+++..+..++.||+.||+|||+.||+|+||+|+||+++.++              
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~--------------  139 (258)
T cd06632          76 NLYIFLELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNG--------------  139 (258)
T ss_pred             eEEEEEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--------------
Confidence            999999999 899999998754  689999999999999999999999999999999999997655              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                   .+||+|||.+......  .....|+..|+|||.+.... ++.++|+|||||++|+|++|..||....
T Consensus       140 -------------~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~  206 (258)
T cd06632         140 -------------VVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE  206 (258)
T ss_pred             -------------CEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc
Confidence                         4566666665543222  23356888999999998776 8999999999999999999999997655


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      .......+... ...                                               ...+..++..+.+|+.+|
T Consensus       207 ~~~~~~~~~~~-~~~-----------------------------------------------~~~~~~~~~~~~~li~~~  238 (258)
T cd06632         207 GVAAVFKIGRS-KEL-----------------------------------------------PPIPDHLSDEAKDFILKC  238 (258)
T ss_pred             HHHHHHHHHhc-ccC-----------------------------------------------CCcCCCcCHHHHHHHHHH
Confidence            33332222110 000                                               011234567899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCC
Q 013678          403 LRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f  422 (438)
                      |+.||++|||+.+++.|||+
T Consensus       239 l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         239 LQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             hhcCcccCcCHHHHhcCCCC
Confidence            99999999999999999997

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.8e-43  Score=337.79  Aligned_cols=248  Identities=25%  Similarity=0.420  Sum_probs=208.0

Q ss_pred             EEEeeeeeecceEEEEEEECCCCcEEEEEEee-----cchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC--e
Q 013678           95 KILSKMGEGTFGQVVECFDNEKKELVAIKIVR-----SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN--H  167 (438)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~-----~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~--~  167 (438)
                      +....||+|+|-+||+|.|..+|..||--.++     +.....+.+..|+.+|+.|+|+||     +++++++.+..  .
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NI-----irfy~SW~d~~n~~  117 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNI-----IRFYDSWVDTDNKT  117 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCce-----eeeeeheecCCCce
Confidence            56678999999999999999999888754432     334556888999999999999988     99999998654  5


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEecCcccccCCccccccC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+|+|++ .|+|..|+++.+  .++...++.|++||+.||.|||++.  |||||||-+||||+.               
T Consensus       118 in~iTEL~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG---------------  180 (632)
T KOG0584|consen  118 INFITELFTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG---------------  180 (632)
T ss_pred             eeeeeecccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC---------------
Confidence            89999999 999999999876  7999999999999999999999986  999999999999964               


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCCc-ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS-YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                 ..+.|||+|+|+|........ ..+|||.|||||+.. ..|+..+||||||++++||+|+.+||....+
T Consensus       181 -----------~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n  248 (632)
T KOG0584|consen  181 -----------NLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTN  248 (632)
T ss_pred             -----------CcCceeecchhHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCC
Confidence                       356899999999988766543 369999999999987 6899999999999999999999999987665


Q ss_pred             HHH-HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          324 LEH-LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       324 ~~~-~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      .-+ +.++..  |-.|..+                                              ..--.+++++||.+|
T Consensus       249 ~AQIYKKV~S--GiKP~sl----------------------------------------------~kV~dPevr~fIekC  280 (632)
T KOG0584|consen  249 PAQIYKKVTS--GIKPAAL----------------------------------------------SKVKDPEVREFIEKC  280 (632)
T ss_pred             HHHHHHHHHc--CCCHHHh----------------------------------------------hccCCHHHHHHHHHH
Confidence            443 333322  2222211                                              011256899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      |.. .++|+|+.|+|+||||..+
T Consensus       281 l~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  281 LAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             hcC-chhccCHHHHhhChhhccc
Confidence            999 9999999999999999986

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=1.6e-42  Score=322.31  Aligned_cols=255  Identities=27%  Similarity=0.454  Sum_probs=205.9

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+...  ......+.+|+.+++.+.|+|+     +++++.+...+.++
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~   75 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYI-----VGFYGAFYNNGDIS   75 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCch-----hhhheeeecCCEEE
Confidence            3578899999999999999999999999999998754  2445677889999999988877     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      +||||+ +++|.+++.... ..+++..+..++.|++.||+|||+ .|++|+||||+||+++.++                
T Consensus        76 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~----------------  138 (265)
T cd06605          76 ICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG----------------  138 (265)
T ss_pred             EEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCC----------------
Confidence            999999 799999998753 478999999999999999999999 9999999999999997655                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh--H
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN--L  324 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~--~  324 (438)
                                 .++|+|||.+...... .....++..|+|||.+.+..++.++|||||||++|+|++|..||...+.  .
T Consensus       139 -----------~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~  207 (265)
T cd06605         139 -----------QIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD  207 (265)
T ss_pred             -----------CEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc
Confidence                       5777888776544221 1125788899999999998999999999999999999999999965421  1


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccC-CchhHHHHHHHHcc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD-HSAGDLIDLLQGLL  403 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ll~~~L  403 (438)
                      .....+.......+.                                              .... .++.++.++|.+||
T Consensus       208 ~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~~l  241 (265)
T cd06605         208 GIFELLQYIVNEPPP----------------------------------------------RLPSGKFSPDFQDFVNLCL  241 (265)
T ss_pred             cHHHHHHHHhcCCCC----------------------------------------------CCChhhcCHHHHHHHHHHc
Confidence            111111111111000                                              0001 15678999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCC
Q 013678          404 RYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      ..||++|||+.+++.||||+.-
T Consensus       242 ~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         242 IKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             CCCchhCcCHHHHhhCchhhcc
Confidence            9999999999999999999763

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.6e-41  Score=319.48  Aligned_cols=265  Identities=23%  Similarity=0.379  Sum_probs=203.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc--CCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--~~~  167 (438)
                      ++|+..++||.|++|.||+|.+..+++.||+|.+....  .....+.+|+++++.++|+||     +++++++..  .+.
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~   75 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYI-----VKYYGAFLDESSSS   75 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCe-----eeeeeEEEccCCCe
Confidence            46899999999999999999999999999999987533  345678899999999988877     999998754  447


Q ss_pred             EEEEEccC-CCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          168 ICIVFEKL-GPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +|+||||+ +++|.+++..  .....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++             
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~-------------  142 (287)
T cd06621          76 IGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKG-------------  142 (287)
T ss_pred             EEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCC-------------
Confidence            99999999 9999988754  2234689999999999999999999999999999999999997655             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC-cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                    .++|+|||++....... ....++..|+|||.+.+..++.++|||||||++|+|++|..||.....
T Consensus       143 --------------~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~  208 (287)
T cd06621         143 --------------QVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGE  208 (287)
T ss_pred             --------------eEEEeeccccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccC
Confidence                          46666776665432221 234578889999999988899999999999999999999999976522


Q ss_pred             --HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          324 --LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       324 --~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                        ..............+.                    ..+.                    ........++.+.+||.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~--------------------~~~~--------------------~~~~~~~~~~~~~~li~~  248 (287)
T cd06621         209 PPLGPIELLSYIVNMPNP--------------------ELKD--------------------EPGNGIKWSEEFKDFIKQ  248 (287)
T ss_pred             CCCChHHHHHHHhcCCch--------------------hhcc--------------------CCCCCCchHHHHHHHHHH
Confidence              0001111110000000                    0000                    000001235688999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          402 LLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      ||..||++|||+.|++.||||++..+.
T Consensus       249 ~l~~~p~~Rpt~~eil~~~~~~~~~~~  275 (287)
T cd06621         249 CLEKDPTRRPTPWDMLEHPWIKAQMKK  275 (287)
T ss_pred             HcCCCcccCCCHHHHHhCccccccccc
Confidence            999999999999999999999776554

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=1.2e-41  Score=316.15  Aligned_cols=250  Identities=30%  Similarity=0.453  Sum_probs=200.6

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh---hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ||++.+.||+|+||.||+|.+..+++.||+|.++....   ..+.+..|+.+++.++|+++     +++++++.+.+.++
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-----~~~~~~~~~~~~~~   75 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNL-----VKYYGVEVHREKVY   75 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCCh-----hheeeeEecCCEEE
Confidence            68999999999999999999998999999999875433   56778899999999998887     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +|+||+ +++|.+++....  .+++..++.++.|++.||.|||++||+|+||+|+||+++.++.                
T Consensus        76 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~----------------  137 (264)
T cd06626          76 IFMEYCSGGTLEELLEHGR--ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGV----------------  137 (264)
T ss_pred             EEEecCCCCcHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC----------------
Confidence            999999 999999998654  5889999999999999999999999999999999999977664                


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC-------cccccCCCcchhHHHhCCC---CCcchhHHHHHHHHHHHHhCCCCC
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH-------SYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                 ++|+|||.+.......       ....++..|+|||++.+..   ++.++|||||||++|++++|..||
T Consensus       138 -----------~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf  206 (264)
T cd06626         138 -----------IKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPW  206 (264)
T ss_pred             -----------EEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCc
Confidence                       4555555544332211       1235788999999998766   889999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      ...+.......... .+..+                     ..                        .....++..+.+|
T Consensus       207 ~~~~~~~~~~~~~~-~~~~~---------------------~~------------------------~~~~~~~~~~~~l  240 (264)
T cd06626         207 SELDNEFQIMFHVG-AGHKP---------------------PI------------------------PDSLQLSPEGKDF  240 (264)
T ss_pred             cCCcchHHHHHHHh-cCCCC---------------------CC------------------------CcccccCHHHHHH
Confidence            76532222111111 01100                     00                        0112336688999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCC
Q 013678          399 LQGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      |.+||+.||.+|||+.+++.|||+
T Consensus       241 i~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         241 LDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             HHHHccCCcccCCCHHHHhcCCCC
Confidence            999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=6.8e-42  Score=317.46  Aligned_cols=245  Identities=22%  Similarity=0.360  Sum_probs=199.5

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      ++|+++++||+|+||.||+|.+. ++..||+|.+.......+.+.+|+.+++.++|+|+     +++++.+...+..++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv   79 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKL-----VRLYAVVTKEEPIYII   79 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCe-----eeEEEEEcCCCCcEEE
Confidence            67999999999999999999864 55679999987655556788899999999988877     9999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||+ +++|.+++.......+++..+..++.|++.||+|||+++++||||||+||+++.++.                  
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~------------------  141 (261)
T cd05072          80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLM------------------  141 (261)
T ss_pred             EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCc------------------
Confidence            9999 999999998765567899999999999999999999999999999999999977664                  


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  325 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~  325 (438)
                               ++|+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.......
T Consensus       142 ---------~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~  212 (261)
T cd05072         142 ---------CKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD  212 (261)
T ss_pred             ---------EEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH
Confidence                     5666666655433211    11245668999999988889999999999999999998 999998766555


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+.....                                                 ......++.++.+++.+||..
T Consensus       213 ~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~li~~~l~~  243 (261)
T cd05072         213 VMSALQRGYR-------------------------------------------------MPRMENCPDELYDIMKTCWKE  243 (261)
T ss_pred             HHHHHHcCCC-------------------------------------------------CCCCCCCCHHHHHHHHHHccC
Confidence            4433322100                                                 001123466899999999999


Q ss_pred             CCCCCCCHHHHhc
Q 013678          406 DPAERLKAREALR  418 (438)
Q Consensus       406 dP~~Rpta~ell~  418 (438)
                      ||++|||++++++
T Consensus       244 ~p~~Rp~~~~i~~  256 (261)
T cd05072         244 KAEERPTFDYLQS  256 (261)
T ss_pred             CcccCcCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=3e-42  Score=326.04  Aligned_cols=255  Identities=24%  Similarity=0.424  Sum_probs=205.0

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEE
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      |....+||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.++..+.|+|+     +++++++..++..|+||
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i-----~~~~~~~~~~~~~~iv~   97 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNV-----VEMYKSYLVGEELWVLM   97 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCch-----hhhhhheeeCCeEEEEE
Confidence            345568999999999999999999999999986432 334567789999999988877     99999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|.+++...   .+++..+..++.||+.||.|||++||+||||||+||+++.++                    
T Consensus        98 e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~--------------------  154 (297)
T cd06659          98 EFLQGGALTDIVSQT---RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDG--------------------  154 (297)
T ss_pred             ecCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCC--------------------
Confidence            999 89999987653   589999999999999999999999999999999999997665                    


Q ss_pred             cCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  328 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~  328 (438)
                             .++|+|||++......   .....|+..|+|||++.+..++.++|||||||++|+|++|..||...+..+.+.
T Consensus       155 -------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~  227 (297)
T cd06659         155 -------RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK  227 (297)
T ss_pred             -------cEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                   4566666665432221   123468899999999998889999999999999999999999998766554443


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+...   .+.                                            ........+..+.++|.+||+.||+
T Consensus       228 ~~~~~---~~~--------------------------------------------~~~~~~~~~~~l~~~i~~~l~~~P~  260 (297)
T cd06659         228 RLRDS---PPP--------------------------------------------KLKNAHKISPVLRDFLERMLTREPQ  260 (297)
T ss_pred             HHhcc---CCC--------------------------------------------CccccCCCCHHHHHHHHHHhcCCcc
Confidence            32211   000                                            0011123466889999999999999


Q ss_pred             CCCCHHHHhcCCCCCCCCCCce
Q 013678          409 ERLKAREALRHPFFTRDVRRPT  430 (438)
Q Consensus       409 ~Rpta~ell~hp~f~~~~~~~~  430 (438)
                      +|||+.++++||||.+..--.+
T Consensus       261 ~Rps~~~ll~~~~~~~~~~~~~  282 (297)
T cd06659         261 ERATAQELLDHPFLLQTGLPEC  282 (297)
T ss_pred             cCcCHHHHhhChhhccCCCccc
Confidence            9999999999999998754333

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=2.4e-42  Score=326.05  Aligned_cols=254  Identities=27%  Similarity=0.419  Sum_probs=205.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      .++|++.+.||+|+||.||++.+..++..||+|.+... ....+.+.+|+.+++.+.|+|+     +++++++...+..|
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i-----~~~~~~~~~~~~~~   92 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNI-----VNYLDSYLVGDELW   92 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCe-----eehhheeeeCCcEE
Confidence            37899999999999999999999889999999998643 2334667889999999888777     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +|+||+ +++|.+++.+.   .+++..+..++.|++.||.|||++|++|+||||+||+++.++.                
T Consensus        93 lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~----------------  153 (293)
T cd06647          93 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS----------------  153 (293)
T ss_pred             EEEecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCC----------------
Confidence            999999 99999998764   4889999999999999999999999999999999999976654                


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                 ++|+|||.+......   .....|+..|+|||.+.+..++.++|||||||++|++++|..||...+...
T Consensus       154 -----------~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~  222 (293)
T cd06647         154 -----------VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR  222 (293)
T ss_pred             -----------EEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence                       566666655432211   122468889999999988889999999999999999999999997655433


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..+..  +..|                                             ........+..+.++|.+||+.
T Consensus       223 ~~~~~~~--~~~~---------------------------------------------~~~~~~~~~~~l~~li~~~l~~  255 (293)
T cd06647         223 ALYLIAT--NGTP---------------------------------------------ELQNPEKLSAIFRDFLNRCLEM  255 (293)
T ss_pred             heeehhc--CCCC---------------------------------------------CCCCccccCHHHHHHHHHHccC
Confidence            3221110  0000                                             0011123456789999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~  426 (438)
                      ||++||++.+++.|+||+...
T Consensus       256 ~p~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         256 DVEKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             ChhhCcCHHHHhcCHHHhcCc
Confidence            999999999999999999765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=4.7e-42  Score=334.86  Aligned_cols=248  Identities=25%  Similarity=0.371  Sum_probs=193.0

Q ss_pred             CceEEEeeeeeecceEEEEEEE-----CCCCcEEEEEEeecch--hhHHHHHHHHHHHHHH-HhcCCCCcceEEecceec
Q 013678           92 PRCKILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~  163 (438)
                      ++|++.+.||+|+||.||+|.+     ..++..||||+++...  ...+.+.+|+.++..+ .|+||     +++++++.
T Consensus        35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnI-----v~l~~~~~  109 (375)
T cd05104          35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINI-----VNLLGACT  109 (375)
T ss_pred             HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcce-----eeeeeeec
Confidence            5799999999999999999964     3467789999986432  3345678899999999 67776     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcC-------------------------------------------------------
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNS-------------------------------------------------------  187 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~-------------------------------------------------------  187 (438)
                      .++..++||||| +|+|.+++....                                                       
T Consensus       110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  189 (375)
T cd05104         110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV  189 (375)
T ss_pred             cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence            999999999999 999999997532                                                       


Q ss_pred             ------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          188 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       188 ------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                                        ...+++..+..++.||+.||+|||++||+||||||+|||++.++.                 
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~-----------------  252 (375)
T cd05104         190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRI-----------------  252 (375)
T ss_pred             ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCc-----------------
Confidence                              124778889999999999999999999999999999999976554                 


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCh
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN  323 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~  323 (438)
                                ++|+|||++.......     ....++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus       253 ----------~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~  322 (375)
T cd05104         253 ----------TKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV  322 (375)
T ss_pred             ----------EEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc
Confidence                      5666666654432211     11234567999999999999999999999999999998 8999976544


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      ......+...                      +.+                          ...+...+.++.+||.+||
T Consensus       323 ~~~~~~~~~~----------------------~~~--------------------------~~~~~~~~~~l~~li~~cl  354 (375)
T cd05104         323 DSKFYKMIKE----------------------GYR--------------------------MLSPECAPSEMYDIMKSCW  354 (375)
T ss_pred             hHHHHHHHHh----------------------Ccc--------------------------CCCCCCCCHHHHHHHHHHc
Confidence            3322221110                      000                          0011233568999999999


Q ss_pred             ccCCCCCCCHHHHhcC
Q 013678          404 RYDPAERLKAREALRH  419 (438)
Q Consensus       404 ~~dP~~Rpta~ell~h  419 (438)
                      +.||++|||+.|+++.
T Consensus       355 ~~dP~~RPs~~eil~~  370 (375)
T cd05104         355 DADPLKRPTFKQIVQL  370 (375)
T ss_pred             cCChhHCcCHHHHHHH
Confidence            9999999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=1.3e-42  Score=333.15  Aligned_cols=305  Identities=17%  Similarity=0.202  Sum_probs=203.4

Q ss_pred             eeeeee--cceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEG--TFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G--~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      ..||+|  +||+||+|++..+|+.||+|++....   ...+.+.+|+.+++.++|+||     ++++++|..++..|+||
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~ni-----v~~~~~~~~~~~~~~v~   78 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNI-----MTSWTVFTTGSWLWVIS   78 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCc-----ceEeeeEecCCceEEEE
Confidence            456666  99999999999999999999986432   234667889999888888887     99999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+.+.......   
T Consensus        79 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~---  155 (328)
T cd08226          79 PFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNG---  155 (328)
T ss_pred             ecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccC---
Confidence            999 8999999987654569999999999999999999999999999999999999988877777765432211110   


Q ss_pred             cCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  329 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~  329 (438)
                                    +.............++..|+|||++.+.  .++.++|||||||++|+|++|..||...........
T Consensus       156 --------------~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~  221 (328)
T cd08226         156 --------------QKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQ  221 (328)
T ss_pred             --------------ccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHH
Confidence                          0000000111122456679999999764  478999999999999999999999987665443333


Q ss_pred             HHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCC
Q 013678          330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  409 (438)
Q Consensus       330 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  409 (438)
                      ........|............ ....  ...+.............................++..+.+||++||++||++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~  298 (328)
T cd08226         222 KLKGPPYSPLDITTFPCEESR-MKNS--QSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEK  298 (328)
T ss_pred             HhcCCCCCCccccccchhhhh-hccc--hhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCccc
Confidence            222111111000000000000 0000  0000000000000000000000000111122345778999999999999999


Q ss_pred             CCCHHHHhcCCCCCCCCC
Q 013678          410 RLKAREALRHPFFTRDVR  427 (438)
Q Consensus       410 Rpta~ell~hp~f~~~~~  427 (438)
                      |||+.|+|+||||+....
T Consensus       299 Rpta~e~l~~~~~~~~~~  316 (328)
T cd08226         299 RPSASSLLSHAFFKQVKE  316 (328)
T ss_pred             CCCHHHHhhCHHHHHHHH
Confidence            999999999999987544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=4.5e-42  Score=322.53  Aligned_cols=247  Identities=23%  Similarity=0.333  Sum_probs=198.7

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCC-----cEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKK-----ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      ++|++.+.||+|+||.||+|.+...+     ..||+|.++...  .....+.+|+.++..++|+++     +++++++..
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-----~~~~~~~~~   79 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNI-----VCLLGVCTK   79 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCccc-----ceEEEEEcC
Confidence            46899999999999999999876554     679999986432  344667899999999988877     999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSY--------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  229 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  229 (438)
                      .+..|++|||+ +++|.+++.....              ..+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus        80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~  159 (283)
T cd05048          80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE  159 (283)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence            89999999999 9999999976421              35788999999999999999999999999999999999977


Q ss_pred             CcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHH
Q 013678          230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSV  304 (438)
Q Consensus       230 ~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  304 (438)
                      ++.                           ++|+|||++......     .....++..|+|||.+.+..++.++|||||
T Consensus       160 ~~~---------------------------~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~sl  212 (283)
T cd05048         160 GLT---------------------------VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSF  212 (283)
T ss_pred             CCc---------------------------EEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHH
Confidence            664                           555666655432211     112356788999999998889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhh
Q 013678          305 GCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL  383 (438)
Q Consensus       305 G~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (438)
                      ||++|||++ |..||.+.+..+....+....  .                                              
T Consensus       213 G~il~el~~~g~~p~~~~~~~~~~~~i~~~~--~----------------------------------------------  244 (283)
T cd05048         213 GVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQ--L----------------------------------------------  244 (283)
T ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC--c----------------------------------------------
Confidence            999999998 999998776655444332210  0                                              


Q ss_pred             hhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       384 ~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                       ......++.++.+|+.+||+.||.+|||+.|++++
T Consensus       245 -~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         245 -LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             -CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence             01123457789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=6.6e-42  Score=325.33  Aligned_cols=257  Identities=24%  Similarity=0.360  Sum_probs=206.7

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      .....+|++.+.||+|+||.||+|.+..+++.||+|.+....    .....+.+|+.+++.++|+|+     +++++++.
T Consensus        11 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni-----v~~~~~~~   85 (307)
T cd06607          11 DDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNT-----IEYKGCYL   85 (307)
T ss_pred             CCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCE-----EEEEEEEE
Confidence            344577999999999999999999999999999999986422    233567889999999988877     99999999


Q ss_pred             cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          164 YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       164 ~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      +.+..|+||||+.++|.+++.... ..+++..+..++.||+.||.|||++||+||||+|+||+++.++            
T Consensus        86 ~~~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~------------  152 (307)
T cd06607          86 REHTAWLVMEYCLGSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPG------------  152 (307)
T ss_pred             eCCeEEEEHHhhCCCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCC------------
Confidence            999999999999888888876543 3689999999999999999999999999999999999997655            


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHh---CCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                     .++|+|||++...... ....++..|+|||++.   ...++.++||||||+++|+|++|..||..
T Consensus       153 ---------------~~kL~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~  216 (307)
T cd06607         153 ---------------TVKLADFGSASLVSPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  216 (307)
T ss_pred             ---------------CEEEeecCcceecCCC-CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCC
Confidence                           5677777776544322 2346788999999875   34578999999999999999999999977


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      .+.......+...  ..|.                     .                         ....++..+.+||.
T Consensus       217 ~~~~~~~~~~~~~--~~~~---------------------~-------------------------~~~~~~~~~~~li~  248 (307)
T cd06607         217 MNAMSALYHIAQN--DSPT---------------------L-------------------------SSNDWSDYFRNFVD  248 (307)
T ss_pred             ccHHHHHHHHhcC--CCCC---------------------C-------------------------CchhhCHHHHHHHH
Confidence            6554433322110  0000                     0                         01123567899999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          401 GLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +||..||++|||+.+++.||||....
T Consensus       249 ~~l~~~p~~Rp~~~~il~~~~~~~~~  274 (307)
T cd06607         249 SCLQKIPQDRPSSEELLKHRFVLRER  274 (307)
T ss_pred             HHhcCChhhCcCHHHHhcChhhcccC
Confidence            99999999999999999999998764

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=8.3e-42  Score=354.50  Aligned_cols=144  Identities=22%  Similarity=0.367  Sum_probs=131.3

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|+++++||+|+||.||+|.+..+++.||||+++...    .....+..|+.++..++|++|     +++++++...++
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~I-----v~~~~~~~~~~~   78 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFI-----VHLYYSLQSANN   78 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCc-----CeEEEEEEECCE
Confidence            67999999999999999999999999999999997532    234667889999999988887     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      +||||||+ +++|.+++....  .+++..++.|+.||+.||+|||++||+||||||+||||+.++.++|+|||++.
T Consensus        79 ~~lVmEy~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          79 VYLVMEYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             EEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            99999999 999999997654  68999999999999999999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-41  Score=318.85  Aligned_cols=275  Identities=32%  Similarity=0.556  Sum_probs=217.1

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      |++.+.||+|+||.||+|.+..+++.||+|++...   ....+.+..|+.+++.++|+++     +++++++.+.+..++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~~   75 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNI-----VKLLDVIHTERKLYL   75 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCH-----HHHHhhhhcCCceEE
Confidence            67789999999999999999999999999998753   2334567789999999988877     999999999999999


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       171 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      ||||++++|.+++.... ..+++..++.++.|++.||+|||++||+||||+|+||+++.++                   
T Consensus        76 v~e~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~-------------------  135 (282)
T cd07829          76 VFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDG-------------------  135 (282)
T ss_pred             EecCcCcCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCC-------------------
Confidence            99999779999998753 3699999999999999999999999999999999999997655                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                              .++|+|||.+.......   ....++..|+|||.+.+. .++.++|||||||++|++++|..||...+....
T Consensus       136 --------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~  207 (282)
T cd07829         136 --------VLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ  207 (282)
T ss_pred             --------CEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence                    46666666665433222   123457789999999876 789999999999999999999999999888888


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      +..+.+..+...+..+.......  .+.    ..++...               ........+..+..+.++|.+||+.|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~---------------~~~~~~~~~~~~~~~~~~i~~~l~~~  266 (282)
T cd07829         208 LFKIFQILGTPTEESWPGVTKLP--DYK----PTFPKFP---------------PKDLEKVLPRLDPEGIDLLSKMLQYN  266 (282)
T ss_pred             HHHHHHHhCCCcHHHHHhhcccc--ccc----ccccccC---------------ccchHHhcccccHHHHHHHHHhhccC
Confidence            88888877766655443332111  000    0000000               00001122334678999999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 013678          407 PAERLKAREALRHPFF  422 (438)
Q Consensus       407 P~~Rpta~ell~hp~f  422 (438)
                      |++||++.++++||||
T Consensus       267 P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         267 PAKRISAKEALKHPYF  282 (282)
T ss_pred             cccCCCHHHHhhCcCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1.5e-41  Score=315.32  Aligned_cols=249  Identities=24%  Similarity=0.423  Sum_probs=202.3

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec--cCCe
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD--YRNH  167 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~--~~~~  167 (438)
                      +|++.+.||.|+||.||+|.+..+++.||+|.+...   ....+.+..|+.+++.++|+|+     +++++++.  .+..
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   75 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNI-----VRYYDRIIDRSNQT   75 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCcc-----ceeeeeeecCCCCE
Confidence            488999999999999999999999999999998643   2345567789999999998887     99988765  3467


Q ss_pred             EEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH-----hCCceecCCCCCcEEEecCcccccCCcc
Q 013678          168 ICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMH-----ELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH-----~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                      .+++|||+ +++|.+++...  ....+++..++.++.||+.||.|||     +.+|+|+||||+||+++.++        
T Consensus        76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~--------  147 (265)
T cd08217          76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANN--------  147 (265)
T ss_pred             EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCC--------
Confidence            89999999 89999999753  2347899999999999999999999     89999999999999997655        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~  316 (438)
                                         .++|+|||++.......   ....|+..|+|||.+.+..++.++|+||||+++|+|++|..
T Consensus       148 -------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~  208 (265)
T cd08217         148 -------------------NVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSP  208 (265)
T ss_pred             -------------------CEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCC
Confidence                               46666666665543322   23468899999999998889999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||...+.......+....  .                                               .......+..+.
T Consensus       209 p~~~~~~~~~~~~~~~~~--~-----------------------------------------------~~~~~~~~~~~~  239 (265)
T cd08217         209 PFTARNQLQLASKIKEGK--F-----------------------------------------------RRIPYRYSSELN  239 (265)
T ss_pred             cccCcCHHHHHHHHhcCC--C-----------------------------------------------CCCccccCHHHH
Confidence            998766443333222110  0                                               011124466899


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCC
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      +++.+||+.||++|||+.+|++|||+
T Consensus       240 ~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         240 EVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HHHHHHccCCcccCCCHHHHhhCCCC
Confidence            99999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=5e-43  Score=328.07  Aligned_cols=254  Identities=28%  Similarity=0.433  Sum_probs=204.4

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +.|++.+.||+|+||.||+|.+..+++.||+|.+...  ....+.+.+|+.+++.+.|+|+     +++++++..++..|
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~   78 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI-----TRYYGSYLKGTKLW   78 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCcc-----HhhhcccccCCceE
Confidence            4577889999999999999999999999999998643  2344567889999999988877     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++...   .+++..++.++.||+.||.|||++||+|+||+|+||+++.++.                
T Consensus        79 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~----------------  139 (277)
T cd06642          79 IIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGD----------------  139 (277)
T ss_pred             EEEEccCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCC----------------
Confidence            999999 89999988653   5899999999999999999999999999999999999976664                


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                 ++|+|||++.......   ....|+..|+|||++.+..++.++|||||||++|+|++|..||.......
T Consensus       140 -----------~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~  208 (277)
T cd06642         140 -----------VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR  208 (277)
T ss_pred             -----------EEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh
Confidence                       5666666654432211   22467889999999998889999999999999999999999997544332


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+...  ..                                               .......+.++.++|.+||+.
T Consensus       209 ~~~~~~~~--~~-----------------------------------------------~~~~~~~~~~~~~li~~~l~~  239 (277)
T cd06642         209 VLFLIPKN--SP-----------------------------------------------PTLEGQYSKPFKEFVEACLNK  239 (277)
T ss_pred             HHhhhhcC--CC-----------------------------------------------CCCCcccCHHHHHHHHHHccC
Confidence            22111000  00                                               001123456889999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          406 DPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      +|++|||+.++++||||..-...+
T Consensus       240 ~p~~Rp~~~~il~~~~~~~~~~~~  263 (277)
T cd06642         240 DPRFRPTAKELLKHKFITRYTKKT  263 (277)
T ss_pred             CcccCcCHHHHHHhHHHHHHhhhH
Confidence            999999999999999998755544

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=1.3e-41  Score=318.65  Aligned_cols=251  Identities=25%  Similarity=0.375  Sum_probs=192.3

Q ss_pred             eeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEcc
Q 013678           99 KMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK  174 (438)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~  174 (438)
                      .||+|+||.||+|.+..+++.||+|.+....    ........|..+++.+.+.  .|++++.+++++...+.+|+||||
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~v~e~   78 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG--DCPFIVCMSYAFHTPDKLSFILDL   78 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhC--CCCcEeeeeeeeecCCEEEEEEec
Confidence            3799999999999999999999999986532    1122344555555555432  346669999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccC
Q 013678          175 L-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  253 (438)
Q Consensus       175 ~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~  253 (438)
                      + |++|.+++....  .+++..++.++.|++.||.|||+++|+||||||+||+++.++.                     
T Consensus        79 ~~g~~L~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~---------------------  135 (278)
T cd05606          79 MNGGDLHYHLSQHG--VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGH---------------------  135 (278)
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCC---------------------
Confidence            9 999999987654  7999999999999999999999999999999999999976654                     


Q ss_pred             CCCCCCeEEecCCCCcccCC-CCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 013678          254 LPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  331 (438)
Q Consensus       254 ~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~  331 (438)
                            ++|+|||.+..... ......|+..|+|||++.+. .++.++||||+||++|+|++|..||.............
T Consensus       136 ------~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~  209 (278)
T cd05606         136 ------VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR  209 (278)
T ss_pred             ------EEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH
Confidence                  56666665543221 12234789999999999754 58999999999999999999999997653221111100


Q ss_pred             HHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCC
Q 013678          332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  411 (438)
Q Consensus       332 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  411 (438)
                      .....                                               ....+...+.++.++|.+||..||.+|+
T Consensus       210 ~~~~~-----------------------------------------------~~~~~~~~s~~~~~li~~~l~~~p~~R~  242 (278)
T cd05606         210 MTLTM-----------------------------------------------AVELPDSFSPELRSLLEGLLQRDVNRRL  242 (278)
T ss_pred             Hhhcc-----------------------------------------------CCCCCCcCCHHHHHHHHHHhhcCHHhcc
Confidence            00000                                               0011223467899999999999999999


Q ss_pred             -----CHHHHhcCCCCCCCCC
Q 013678          412 -----KAREALRHPFFTRDVR  427 (438)
Q Consensus       412 -----ta~ell~hp~f~~~~~  427 (438)
                           ++.++++||||++...
T Consensus       243 ~~~~~~~~~ll~~~~~~~~~~  263 (278)
T cd05606         243 GCLGRGAQEVKEHPFFRSLDW  263 (278)
T ss_pred             CCCCCCHHHHHhCccccCCCc
Confidence                 9999999999987543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=6e-42  Score=329.92  Aligned_cols=283  Identities=33%  Similarity=0.489  Sum_probs=216.5

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceec
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~  163 (438)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||+|.+...   ......+.+|+.++.++ +|+|+     +++++++.
T Consensus         3 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni-----~~~~~~~~   77 (337)
T cd07852           3 KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNI-----VKLLNVIK   77 (337)
T ss_pred             chhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCc-----cceeeeec
Confidence            34668899999999999999999999989999999988532   23345567899999999 88887     99999876


Q ss_pred             c--CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          164 Y--RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       164 ~--~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      .  ....|+||||++++|.+++...   .+++..++.++.||+.||+|||++||+||||||+||+++.++.+        
T Consensus        78 ~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~--------  146 (337)
T cd07852          78 AENDKDIYLVFEYMETDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRV--------  146 (337)
T ss_pred             cCCCceEEEEecccccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcE--------
Confidence            4  3478999999977999998764   58899999999999999999999999999999999999877654        


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCC--------CCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHH
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--------DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELC  312 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell  312 (438)
                                         +|+|||.+.....        ......||..|+|||.+.+. .++.++|||||||++|+|+
T Consensus       147 -------------------kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~  207 (337)
T cd07852         147 -------------------KLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEML  207 (337)
T ss_pred             -------------------EEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHH
Confidence                               5555554443211        11224688999999987654 5789999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhh-hhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCc
Q 013678          313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEK-YFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  391 (438)
Q Consensus       313 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (438)
                      +|+.||.+....+....+....+..+...+......... .....                   ..... ..........
T Consensus       208 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~-~~~~~~~~~~  267 (337)
T cd07852         208 LGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSL-------------------PSRPR-KPLDELLPKA  267 (337)
T ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhc-------------------ccccc-cchhhhccCC
Confidence            999999988888888888777776665433322111110 00000                   00000 0011222346


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       392 ~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      +.++.+||.+||+.||++|||+.++++||||++-
T Consensus       268 ~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         268 SDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             CHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence            7899999999999999999999999999999775

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=1.5e-41  Score=319.33  Aligned_cols=253  Identities=27%  Similarity=0.446  Sum_probs=204.4

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      +|...+.||+|++|.||++.+..+++.||+|++.... ...+.+.+|+.+++.+.|+++     +++++++...++.|+|
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~v-----v~~~~~~~~~~~~~~v   94 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNI-----VEMYSSYLVGDELWVV   94 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCCh-----heEEEEEEcCCeEEEE
Confidence            4566689999999999999999999999999886433 334567889999999988877     9999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      +||+ +++|.+++...   .+++..+..++.||+.||+|||++||+||||||+||+++.++.                  
T Consensus        95 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~------------------  153 (285)
T cd06648          95 MEFLEGGALTDIVTHT---RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGR------------------  153 (285)
T ss_pred             EeccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCc------------------
Confidence            9999 99999998773   5899999999999999999999999999999999999977664                  


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  327 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~  327 (438)
                               ++|+|||.+......   .....|+..|+|||.+.+..++.++|||||||++|+|++|..||...+.....
T Consensus       154 ---------~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~  224 (285)
T cd06648         154 ---------VKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAM  224 (285)
T ss_pred             ---------EEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHH
Confidence                     556666554432211   12246888999999998888999999999999999999999999776554444


Q ss_pred             HHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCC
Q 013678          328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  407 (438)
Q Consensus       328 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  407 (438)
                      ..+....  .+                                             .......++..+.+||.+||+.||
T Consensus       225 ~~~~~~~--~~---------------------------------------------~~~~~~~~~~~l~~li~~~l~~~p  257 (285)
T cd06648         225 KRIRDNL--PP---------------------------------------------KLKNLHKVSPRLRSFLDRMLVRDP  257 (285)
T ss_pred             HHHHhcC--CC---------------------------------------------CCcccccCCHHHHHHHHHHcccCh
Confidence            3332210  00                                             000112356689999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCCCC
Q 013678          408 AERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       408 ~~Rpta~ell~hp~f~~~~~  427 (438)
                      ++|||+.++++||||+....
T Consensus       258 ~~Rpt~~~il~~~~~~~~~~  277 (285)
T cd06648         258 AQRATAAELLNHPFLAKAGP  277 (285)
T ss_pred             hhCcCHHHHccCcccccCCC
Confidence            99999999999999988654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=2.2e-41  Score=315.34  Aligned_cols=248  Identities=25%  Similarity=0.390  Sum_probs=195.7

Q ss_pred             EEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEcc
Q 013678           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK  174 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~  174 (438)
                      ....||+|+||.||+|.+..++..||+|.+.... ...+.+.+|+.+++.++|+|+     +++++++..++..++||||
T Consensus        12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~lv~e~   86 (268)
T cd06624          12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNI-----VQYLGSDSENGFFKIFMEQ   86 (268)
T ss_pred             ceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCe-----eeeeeeeccCCEEEEEEec
Confidence            3457999999999999999999999999886533 345678899999999988877     9999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          175 L-GPSLYDFLRKNSYRSF--PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       175 ~-~~~L~~~l~~~~~~~l--~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      + +++|.+++.... ..+  ++..+..++.||+.||.|||++||+||||||+||+++.+                     
T Consensus        87 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~---------------------  144 (268)
T cd06624          87 VPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTY---------------------  144 (268)
T ss_pred             CCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC---------------------
Confidence            9 999999998643 234  788899999999999999999999999999999999642                     


Q ss_pred             cCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLG--WNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                           ...++|+|||.+......   .....|+..|+|||++.+..  ++.++||||||+++|+|++|..||........
T Consensus       145 -----~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~  219 (268)
T cd06624         145 -----SGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA  219 (268)
T ss_pred             -----CCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh
Confidence                 225777888776543221   12246788999999987654  78999999999999999999999965432211


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      .........                                               .....+...++++.+|+.+||+.+
T Consensus       220 ~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~li~~~l~~~  252 (268)
T cd06624         220 AMFKVGMFK-----------------------------------------------IHPEIPESLSAEAKNFILRCFEPD  252 (268)
T ss_pred             hHhhhhhhc-----------------------------------------------cCCCCCcccCHHHHHHHHHHcCCC
Confidence            100000000                                               001112345678999999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 013678          407 PAERLKAREALRHPFF  422 (438)
Q Consensus       407 P~~Rpta~ell~hp~f  422 (438)
                      |++|||+.|++.||||
T Consensus       253 p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         253 PDKRASAHDLLQDPFL  268 (268)
T ss_pred             chhCCCHHHHHhCCCC
Confidence            9999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.4e-41  Score=318.37  Aligned_cols=251  Identities=21%  Similarity=0.310  Sum_probs=201.3

Q ss_pred             CCceEEEeeeeeecceEEEEEEECC-----CCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      .++|++.+.||+|+||.||+|.+..     ++..||+|.+...  ......+.+|+.+++.++|+++     +++++++.
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~   79 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNI-----VRLIGVSF   79 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEc
Confidence            3678999999999999999999877     7788999988643  2334568889999999988777     99999998


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSY-----RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      +.+..++||||+ +++|.+++.....     ..+++..+..++.||+.||+|||+++++||||||+||+++.++      
T Consensus        80 ~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~------  153 (277)
T cd05036          80 ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKG------  153 (277)
T ss_pred             cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccC------
Confidence            888999999999 9999999976531     2588999999999999999999999999999999999997654      


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCc-----ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHH
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC  312 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell  312 (438)
                                        ....++|+|||++........     ....+..|+|||++.+..++.++|||||||++|+|+
T Consensus       154 ------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~  215 (277)
T cd05036         154 ------------------PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIF  215 (277)
T ss_pred             ------------------CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHH
Confidence                              123578888888775432211     123346799999999888999999999999999999


Q ss_pred             h-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCc
Q 013678          313 S-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  391 (438)
Q Consensus       313 t-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (438)
                      + |..||.+.+.......+....                       .                          ...+..+
T Consensus       216 ~~g~~pf~~~~~~~~~~~~~~~~-----------------------~--------------------------~~~~~~~  246 (277)
T cd05036         216 SLGYMPYPGRTNQEVMEFVTGGG-----------------------R--------------------------LDPPKGC  246 (277)
T ss_pred             cCCCCCCCCCCHHHHHHHHHcCC-----------------------c--------------------------CCCCCCC
Confidence            7 999998766554433222110                       0                          0012234


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          392 AGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       392 ~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      +..+.+++.+||+.||++|||+.++++|
T Consensus       247 ~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         247 PGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            6688999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=1.6e-41  Score=315.26  Aligned_cols=253  Identities=26%  Similarity=0.460  Sum_probs=206.0

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      +|++.+.||+|++|.||+|.+..+++.||+|++....  .....+.+|+.++..++|+++     +++++++...+..++
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~l   76 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYV-----VKCYGAFYKEGEISI   76 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCe-----eeEEEEEccCCeEEE
Confidence            5889999999999999999999999999999987543  345778899999999998877     999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      ||||+ +++|.+++....  .+++..+..++.||+.||+|||+ +|++||||+|+||+++.++                 
T Consensus        77 v~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~-----------------  137 (264)
T cd06623          77 VLEYMDGGSLADLLKKVG--KIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKG-----------------  137 (264)
T ss_pred             EEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCC-----------------
Confidence            99999 899999998753  79999999999999999999999 9999999999999997665                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                .++|+|||.+.......   ....++..|+|||.+.+..++.++||||||+++|+|++|..||.......
T Consensus       138 ----------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~  207 (264)
T cd06623         138 ----------EVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS  207 (264)
T ss_pred             ----------CEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC
Confidence                      45666666655433222   13467889999999998889999999999999999999999997664211


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC-chhHHHHHHHHccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH-SAGDLIDLLQGLLR  404 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ll~~~L~  404 (438)
                      ....+........                                              ...... ++..+.++|.+||.
T Consensus       208 ~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~l~~li~~~l~  241 (264)
T cd06623         208 FFELMQAICDGPP----------------------------------------------PSLPAEEFSPEFRDFISACLQ  241 (264)
T ss_pred             HHHHHHHHhcCCC----------------------------------------------CCCCcccCCHHHHHHHHHHcc
Confidence            1111111110000                                              001112 56789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .+|++|||+.++++||||++.
T Consensus       242 ~~p~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         242 KDPKKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             CChhhCCCHHHHHhCHHHHhc
Confidence            999999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=8.4e-43  Score=302.64  Aligned_cols=254  Identities=25%  Similarity=0.381  Sum_probs=203.2

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      .+++..||+|+-|.||+++.+.+|...|||.+.++.  +..+.++..+.++..-.    +.|+||+.+|+|..+..++|.
T Consensus        94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~----dcpyIV~c~GyFi~n~dV~Ic  169 (391)
T KOG0983|consen   94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSH----DCPYIVQCFGYFITNTDVFIC  169 (391)
T ss_pred             hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhcc----CCCeeeeeeeEEeeCchHHHH
Confidence            466788999999999999999999999999997643  34455666666654433    236669999999999999999


Q ss_pred             EccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      ||.|+.-+..++++-. ..+++..+-++...++.||.||-+ +||+|||+||+|||+++.|                   
T Consensus       170 MelMs~C~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~G-------------------  229 (391)
T KOG0983|consen  170 MELMSTCAEKLLKRIK-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG-------------------  229 (391)
T ss_pred             HHHHHHHHHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCC-------------------
Confidence            9999777777777644 579999999999999999999985 6899999999999997766                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCC---CCCcchhHHHHHHHHHHHHhCCCCCCCCC-hH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHE-NL  324 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~pf~~~~-~~  324 (438)
                              .+||||||++.+.-+.  .+...|.+.|||||.+.-.   .|+-++||||||++|+||.||+.||.+.+ +.
T Consensus       230 --------niKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF  301 (391)
T KOG0983|consen  230 --------NIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF  301 (391)
T ss_pred             --------CEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH
Confidence                    6788888877664333  3446899999999998744   58899999999999999999999998854 44


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +.+..+..   ..|+.+                                            ......++++++|+..||+
T Consensus       302 e~ltkvln---~ePP~L--------------------------------------------~~~~gFSp~F~~fv~~CL~  334 (391)
T KOG0983|consen  302 EVLTKVLN---EEPPLL--------------------------------------------PGHMGFSPDFQSFVKDCLT  334 (391)
T ss_pred             HHHHHHHh---cCCCCC--------------------------------------------CcccCcCHHHHHHHHHHhh
Confidence            55544433   222111                                            0112367899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +|+.+||...++|+|||+..-.
T Consensus       335 kd~r~RP~Y~~Ll~h~Fi~~ye  356 (391)
T KOG0983|consen  335 KDHRKRPKYNKLLEHPFIKRYE  356 (391)
T ss_pred             cCcccCcchHHHhcCcceeecc
Confidence            9999999999999999997643

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=1.6e-41  Score=314.05  Aligned_cols=244  Identities=23%  Similarity=0.345  Sum_probs=197.3

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      +.|++.+.||+|+||.||++.... +..+|+|.+.........+.+|+.+++.++|+|+     +++++++...+..++|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~iv   77 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKL-----VQLYGVCTQQKPLYIV   77 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHCCCCCc-----eeEEEEEccCCCEEEE
Confidence            468899999999999999998754 5579999987655556778899999999998877     9999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||+ +++|.+++.... ..+++..++.++.|++.||+|||++||+||||||+||+++.++                   
T Consensus        78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~-------------------  137 (256)
T cd05114          78 TEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTG-------------------  137 (256)
T ss_pred             EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCC-------------------
Confidence            9999 999999997643 3589999999999999999999999999999999999997655                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  325 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~  325 (438)
                              .++|+|||.+.......    ....++..|+|||++.+..++.++||||||+++|+|++ |+.||...+..+
T Consensus       138 --------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~  209 (256)
T cd05114         138 --------VVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE  209 (256)
T ss_pred             --------eEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence                    45666666555432111    11234567999999988889999999999999999999 999998776655


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..+.+....                                                 ..+...+..+.+|+.+||+.
T Consensus       210 ~~~~i~~~~~~-------------------------------------------------~~~~~~~~~~~~li~~c~~~  240 (256)
T cd05114         210 VVEMISRGFRL-------------------------------------------------YRPKLASMTVYEVMYSCWHE  240 (256)
T ss_pred             HHHHHHCCCCC-------------------------------------------------CCCCCCCHHHHHHHHHHccC
Confidence            55444321100                                                 00112355789999999999


Q ss_pred             CCCCCCCHHHHhc
Q 013678          406 DPAERLKAREALR  418 (438)
Q Consensus       406 dP~~Rpta~ell~  418 (438)
                      ||++|||+.++++
T Consensus       241 ~p~~Rps~~~l~~  253 (256)
T cd05114         241 KPEGRPTFAELLR  253 (256)
T ss_pred             CcccCcCHHHHHH
Confidence            9999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=6.5e-42  Score=320.90  Aligned_cols=246  Identities=21%  Similarity=0.332  Sum_probs=197.6

Q ss_pred             CceEEEeeeeeecceEEEEEEECC-----CCcEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      .+|.+.+.||+|+||.||+|.+..     +++.||+|+++....  ..+.+.+|+++++.+.|+++     +++++++..
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~   79 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENI-----VKFYGVCTE   79 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCc-----hheeeEEec
Confidence            568899999999999999998743     467899999875432  35678899999999988877     999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNS------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  231 (438)
                      ....++||||+ +++|.+++...+            ...+++..+..++.||+.||.|||++||+||||||+||+++.++
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~  159 (280)
T cd05049          80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDL  159 (280)
T ss_pred             CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCC
Confidence            99999999999 999999997643            13578899999999999999999999999999999999997766


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHHHH
Q 013678          232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC  306 (438)
Q Consensus       232 ~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  306 (438)
                      .                           ++|+|||.+......     .....++..|+|||++.+..++.++|||||||
T Consensus       160 ~---------------------------~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  212 (280)
T cd05049         160 V---------------------------VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGV  212 (280)
T ss_pred             e---------------------------EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHH
Confidence            5                           455555555432111     11234577899999999999999999999999


Q ss_pred             HHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhh
Q 013678          307 ILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  385 (438)
Q Consensus       307 il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (438)
                      ++|+|++ |..||...+..+....+......                                                 
T Consensus       213 il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~-------------------------------------------------  243 (280)
T cd05049         213 VLWEIFTYGKQPWYGLSNEEVIECITQGRLL-------------------------------------------------  243 (280)
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHHcCCcC-------------------------------------------------
Confidence            9999998 99999876665544443211100                                                 


Q ss_pred             hccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       386 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ......+..+.++|.+||+.||++|||+.|+++
T Consensus       244 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         244 QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            011234668999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=9.1e-42  Score=319.53  Aligned_cols=254  Identities=27%  Similarity=0.430  Sum_probs=205.5

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      -|++.++||+|+||.||+|.+..+++.||||++....  .....+.+|+.++..+.|+|+     +++++++..++..|+
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~l   79 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV-----TKYYGSYLKDTKLWI   79 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCE-----eEEEEEEEeCCeEEE
Confidence            4778899999999999999999999999999976432  334567889999999988777     999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||+ +++|.+++...   .+++..+..++.|++.||.|||++|++|+||||+||+++.++                  
T Consensus        80 v~e~~~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~------------------  138 (277)
T cd06641          80 IMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG------------------  138 (277)
T ss_pred             EEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCC------------------
Confidence            99999 88999998753   589999999999999999999999999999999999997665                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                               .++|+|||.+......   .....++..|+|||.+.+...+.++|+|||||++|+|++|..||........
T Consensus       139 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~  209 (277)
T cd06641         139 ---------EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKV  209 (277)
T ss_pred             ---------CEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHH
Confidence                     4566666665433221   1224678899999999888889999999999999999999999976554333


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      ...+...  ..+                                               .....++.++.++|.+||+.|
T Consensus       210 ~~~~~~~--~~~-----------------------------------------------~~~~~~~~~~~~~i~~~l~~~  240 (277)
T cd06641         210 LFLIPKN--NPP-----------------------------------------------TLEGNYSKPLKEFVEACLNKE  240 (277)
T ss_pred             HHHHhcC--CCC-----------------------------------------------CCCcccCHHHHHHHHHHccCC
Confidence            3222110  000                                               011234668999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCCCCce
Q 013678          407 PAERLKAREALRHPFFTRDVRRPT  430 (438)
Q Consensus       407 P~~Rpta~ell~hp~f~~~~~~~~  430 (438)
                      |.+||++.++++||||.+....++
T Consensus       241 p~~Rp~~~~~l~~~~~~~~~~~~~  264 (277)
T cd06641         241 PSFRPTAKELLKHKFIVRFAKKTS  264 (277)
T ss_pred             hhhCcCHHHHHhCHHHhhhhhccc
Confidence            999999999999999998765543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=2e-41  Score=315.45  Aligned_cols=249  Identities=26%  Similarity=0.420  Sum_probs=193.4

Q ss_pred             CceEEEeee--eeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKM--GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~l--g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ++|.+.+.+  |+|+||.||++.++.+++.+|+|++.......    .|+.....+.    .|+|++++++.+...+..|
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~e~~~~~~~~----~h~~iv~~~~~~~~~~~~~   85 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA----IEPMVHQLMK----DNPNFIKLYYSVTTLKGHV   85 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch----hhHHHHHHhh----cCCCEEEEEEEEecCCeeE
Confidence            566777766  99999999999999999999999986532211    1333322222    2355599999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++....  .+++..++.++.||+.||.|||+.||+||||||+||+++.++                 
T Consensus        86 iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~-----------------  146 (267)
T PHA03390         86 LIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK-----------------  146 (267)
T ss_pred             EEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC-----------------
Confidence            999999 999999998764  799999999999999999999999999999999999997644                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH-H
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH-L  327 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~-~  327 (438)
                               ..++|+|||.+....... ...|+..|+|||++.+..++.++|||||||++|+|++|..||........ .
T Consensus       147 ---------~~~~l~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~  216 (267)
T PHA03390        147 ---------DRIYLCDYGLCKIIGTPS-CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDL  216 (267)
T ss_pred             ---------CeEEEecCccceecCCCc-cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhH
Confidence                     147777887776544322 24688999999999998899999999999999999999999975433221 1


Q ss_pred             HHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCC
Q 013678          328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  407 (438)
Q Consensus       328 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  407 (438)
                      ..+......                                               ........+..+.+||.+||+.||
T Consensus       217 ~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~li~~~l~~~p  249 (267)
T PHA03390        217 ESLLKRQQK-----------------------------------------------KLPFIKNVSKNANDFVQSMLKYNI  249 (267)
T ss_pred             HHHHHhhcc-----------------------------------------------cCCcccccCHHHHHHHHHHhccCh
Confidence            111110000                                               001122457789999999999999


Q ss_pred             CCCCC-HHHHhcCCCCCC
Q 013678          408 AERLK-AREALRHPFFTR  424 (438)
Q Consensus       408 ~~Rpt-a~ell~hp~f~~  424 (438)
                      .+|++ ++|+|+||||+.
T Consensus       250 ~~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        250 NYRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             hhCCchHHHHhcCCcccC
Confidence            99996 699999999974

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=6.4e-42  Score=322.35  Aligned_cols=260  Identities=26%  Similarity=0.399  Sum_probs=200.9

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHH-hcCCCCcceEEecceeccCCeEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +|+..+.||+|+||.||++.+..+++.||+|.+....  .....+.+|+.++.++. |+|+     +++++++..++..+
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i-----v~~~~~~~~~~~~~   79 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYI-----VKFYGALFREGDCW   79 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCE-----eeeeeEEecCCcEE
Confidence            5667789999999999999999999999999986432  34456788999998886 7666     99999999889999


Q ss_pred             EEEccCCCCHHHHHH---hcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          170 IVFEKLGPSLYDFLR---KNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       170 lv~e~~~~~L~~~l~---~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ++|||++++|.++..   ......+++..+..++.|++.||+|||+ .||+||||||+||+++.++              
T Consensus        80 ~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~--------------  145 (288)
T cd06616          80 ICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNG--------------  145 (288)
T ss_pred             EEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCC--------------
Confidence            999999777766543   2223579999999999999999999997 4999999999999997655              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCC---CCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                   .++|+|||++......  .....|+..|+|||++.+.   .++.++|||||||++|+|++|..||..
T Consensus       146 -------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  212 (288)
T cd06616         146 -------------NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPK  212 (288)
T ss_pred             -------------cEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchh
Confidence                         4677777766543221  2234688899999999876   588999999999999999999999975


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      ..  .....+.+.....+.                                          .........++.++.+||.
T Consensus       213 ~~--~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~~~l~~li~  248 (288)
T cd06616         213 WN--SVFDQLTQVVKGDPP------------------------------------------ILSNSEEREFSPSFVNFIN  248 (288)
T ss_pred             cc--hHHHHHhhhcCCCCC------------------------------------------cCCCcCCCccCHHHHHHHH
Confidence            44  122222222111100                                          0000111245778999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          401 GLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      +||+.||++|||++++++||||.+..++
T Consensus       249 ~~l~~~p~~Rpt~~~i~~~~~~~~~~~~  276 (288)
T cd06616         249 LCLIKDESKRPKYKELLEHPFIKDYEER  276 (288)
T ss_pred             HHccCChhhCcCHHHHhcChhhhchhhc
Confidence            9999999999999999999999875443

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-42  Score=307.97  Aligned_cols=287  Identities=28%  Similarity=0.465  Sum_probs=233.8

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC-
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~-  165 (438)
                      +..||.-++.+|.|.- .|..|.|.-.++.||+|++..   +....+.+.+|..++..++|+|+     ++++.+|.-. 
T Consensus        15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~ni-----i~l~n~ftP~~   88 (369)
T KOG0665|consen   15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNI-----ISLLNVFTPQK   88 (369)
T ss_pred             eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccce-----eeeeeccCccc
Confidence            4578999999999998 888899999999999998753   23345678899999999999988     9999998743 


Q ss_pred             -----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          166 -----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       166 -----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                           ..+|+|||+|..+|.+.+..    .++...+..+++|++.|++|||+.||+||||||+||++..++         
T Consensus        89 ~l~~~~e~y~v~e~m~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~---------  155 (369)
T KOG0665|consen   89 TLEEFQEVYLVMELMDANLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDC---------  155 (369)
T ss_pred             cHHHHHhHHHHHHhhhhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchh---------
Confidence                 36899999999999999873    478889999999999999999999999999999999997665         


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                        .+||.|||+|+..+..  .+..+.|..|+|||++.+..+...+||||+||++.||++|...|
T Consensus       156 ------------------~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf  217 (369)
T KOG0665|consen  156 ------------------TLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLF  217 (369)
T ss_pred             ------------------heeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEe
Confidence                              4666666666654433  34468899999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhcc--chhhhhhccCCchhHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR--LPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~  396 (438)
                      .+.+..++..++.+.+|.+.+++..+.....+.|+........          ..+.+...  ......+.....+..++
T Consensus       218 ~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~----------~~f~~~fpD~~f~~~~e~~~~~~~~ar  287 (369)
T KOG0665|consen  218 PGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQA----------ISFSELFPDSLFPVVLEGSKLDCSLAR  287 (369)
T ss_pred             cCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhc----------cchhhhCCcccccccccCCccchHHHH
Confidence            9999999999999999999999999888777777663211110          00000000  01111222234466789


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCC
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFFT  423 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f~  423 (438)
                      +|+.+||..||++|.+++++|+||||+
T Consensus       288 dll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  288 DLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             HHHHHhhccChhhcccHHHHhcCCeee
Confidence            999999999999999999999999997

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-41  Score=318.73  Aligned_cols=259  Identities=22%  Similarity=0.377  Sum_probs=204.8

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      .|++.+.||+|+||.||+|.+..+++.||+|.++..  ......+.+|+.+++.+.+  ..|++++++++++..+...|+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~--~~~~~vi~~~~~~~~~~~~~l   79 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQ--SQPPNITKYYGSYLKGPRLWI   79 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhcc--CCCCCeeeEeeeeeeCCEEEE
Confidence            478889999999999999999999999999998643  2344567889999999974  234566999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||+ +++|.+++...   .+++..+..++.|++.||.|||+.||+|+||+|+||+++.++                  
T Consensus        80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~------------------  138 (277)
T cd06917          80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTG------------------  138 (277)
T ss_pred             EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCC------------------
Confidence            99999 99999998654   689999999999999999999999999999999999997655                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                               .++|+|||.+......   .....|+..|+|||.+.+. .++.++|+|||||++|+|++|..||...+...
T Consensus       139 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~  209 (277)
T cd06917         139 ---------NVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR  209 (277)
T ss_pred             ---------CEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence                     4666666666543322   2234688899999998754 47899999999999999999999997654432


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+...   .+.                    .+                         .....+.++.++|.+||+.
T Consensus       210 ~~~~~~~~---~~~--------------------~~-------------------------~~~~~~~~~~~~i~~~l~~  241 (277)
T cd06917         210 AMMLIPKS---KPP--------------------RL-------------------------EDNGYSKLLREFVAACLDE  241 (277)
T ss_pred             hhhccccC---CCC--------------------CC-------------------------CcccCCHHHHHHHHHHcCC
Confidence            22111000   000                    00                         0012456899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCCCcee
Q 013678          406 DPAERLKAREALRHPFFTRDVRRPTL  431 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~~~~~~  431 (438)
                      ||++|||+.++++|+||++....+..
T Consensus       242 ~p~~R~~~~~il~~~~~~~~~~~~~~  267 (277)
T cd06917         242 EPKERLSAEELLKSKWIKAHSKTPVS  267 (277)
T ss_pred             CcccCcCHHHHhhChHhhccccCchh
Confidence            99999999999999999887654443

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=100.00  E-value=3.5e-43  Score=297.68  Aligned_cols=281  Identities=27%  Similarity=0.535  Sum_probs=219.3

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC--Ce
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--NH  167 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~--~~  167 (438)
                      -.++|++++++|+|-|+.||.|.+..+++.++||+++...  .+.+.+|+.||+.|.    +++||++++++..+.  ..
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~----gg~NIi~L~DiV~Dp~Skt  109 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLR----GGPNIIKLLDIVKDPESKT  109 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhcc----CCCCeeehhhhhcCccccC
Confidence            4578999999999999999999999999999999997543  467889999999998    345559999998764  46


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      ..||+||+ +.+...+..     .++...++.++.+++.||.|||++||+|||+||.|++|+..                
T Consensus       110 paLiFE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~----------------  168 (338)
T KOG0668|consen  110 PSLIFEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHE----------------  168 (338)
T ss_pred             chhHhhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechh----------------
Confidence            88999999 767666543     58889999999999999999999999999999999999753                


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCCcc--cccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCC-CCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALF-QTHE  322 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf-~~~~  322 (438)
                                ...++|+|+|+|.+.+....+  .+.+..|--||.+..- .|+.+-|+|||||+|..|+..+.|| .+.+
T Consensus       169 ----------~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~d  238 (338)
T KOG0668|consen  169 ----------LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD  238 (338)
T ss_pred             ----------hceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCC
Confidence                      447899999999987766544  5778999999998875 4899999999999999999988886 6788


Q ss_pred             hHHHHHHHHHHhCCCChH-HHHHH----hhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhc-cCCchhHHH
Q 013678          323 NLEHLAMMERVLGPLPHH-MVIRA----DRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH-VDHSAGDLI  396 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~  396 (438)
                      +.+++..|.+++|.---. ++.+.    +...........+..|                   ....... ..-.++++.
T Consensus       239 N~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w-------------------~~Fi~~~n~hl~~peai  299 (338)
T KOG0668|consen  239 NYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPW-------------------SRFINSENQHLVSPEAI  299 (338)
T ss_pred             CHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccH-------------------HHhCCccccccCChHHH
Confidence            999999999998852110 00000    0000000111111111                   1111111 123468999


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      |||.++|.+|-++|+||+|++.||||....
T Consensus       300 DlldklLrYDHqeRlTakEam~HpyF~~~~  329 (338)
T KOG0668|consen  300 DLLDKLLRYDHQERLTAKEAMAHPYFAPVR  329 (338)
T ss_pred             HHHHHHHhhccccccchHHHhcCchHHHHH
Confidence            999999999999999999999999997543

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=2.4e-41  Score=314.03  Aligned_cols=245  Identities=26%  Similarity=0.343  Sum_probs=195.6

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      .++|++.++||+|+||.||+|.+..++ .||+|+++......+.+.+|+.+++.+.|+++     +++++.+.. ...++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i-----~~~~~~~~~-~~~~l   77 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL-----VQLYAVVSE-EPIYI   77 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccCHHHHHHHHHHHHhCCCCCc-----ceEEEEECC-CCcEE
Confidence            468999999999999999999886664 59999998655555678899999999988877     898887754 56899


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||+ +++|.+++.......+++..+..++.|++.||+|||+.||+||||||+||+++.++                  
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~------------------  139 (262)
T cd05071          78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL------------------  139 (262)
T ss_pred             EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCC------------------
Confidence            99999 89999999875445689999999999999999999999999999999999997655                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCCCc----ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQDHS----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL  324 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~  324 (438)
                               .++|+|||.+........    ...++..|+|||+..+..++.++|||||||++|+|++ |..||.+....
T Consensus       140 ---------~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~  210 (262)
T cd05071         140 ---------VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR  210 (262)
T ss_pred             ---------cEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH
Confidence                     456666666654332211    1245678999999988889999999999999999999 88899776554


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +....+.... ..                                                ......+..+.+||.+||+
T Consensus       211 ~~~~~~~~~~-~~------------------------------------------------~~~~~~~~~l~~li~~~l~  241 (262)
T cd05071         211 EVLDQVERGY-RM------------------------------------------------PCPPECPESLHDLMCQCWR  241 (262)
T ss_pred             HHHHHHhcCC-CC------------------------------------------------CCccccCHHHHHHHHHHcc
Confidence            4433322110 00                                                0112346688999999999


Q ss_pred             cCCCCCCCHHHHhc
Q 013678          405 YDPAERLKAREALR  418 (438)
Q Consensus       405 ~dP~~Rpta~ell~  418 (438)
                      .||++|||+.++++
T Consensus       242 ~~p~~Rp~~~~~~~  255 (262)
T cd05071         242 KEPEERPTFEYLQA  255 (262)
T ss_pred             CCcccCCCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=3.2e-41  Score=317.68  Aligned_cols=255  Identities=21%  Similarity=0.334  Sum_probs=198.8

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECC-----CCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      ..++|++.++||+|+||.||+|..+.     .+..||+|.+....  .....+.+|+.+++.+.|+++     +++++++
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~   78 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV-----VRLLGVV   78 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCe-----eeEEEEE
Confidence            35789999999999999999997642     34579999886433  233456789999999988877     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccc
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNS--------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  233 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~  233 (438)
                      ...+..|+||||+ +++|.+++....        ...++...+..++.||+.||.|||++||+||||||+||+++.++. 
T Consensus        79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~-  157 (288)
T cd05061          79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT-  157 (288)
T ss_pred             cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCc-
Confidence            9999999999999 999999997532        123467788999999999999999999999999999999976654 


Q ss_pred             ccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHH
Q 013678          234 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL  308 (438)
Q Consensus       234 kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il  308 (438)
                                                ++|+|||+++......     ....++..|+|||.+.+..++.++|||||||++
T Consensus       158 --------------------------~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l  211 (288)
T cd05061         158 --------------------------VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL  211 (288)
T ss_pred             --------------------------EEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHH
Confidence                                      5666666554322111     112456779999999988899999999999999


Q ss_pred             HHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhc
Q 013678          309 VELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH  387 (438)
Q Consensus       309 ~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (438)
                      |||++ |..||.+....+....+...  ..                                               ...
T Consensus       212 ~el~~~~~~p~~~~~~~~~~~~~~~~--~~-----------------------------------------------~~~  242 (288)
T cd05061         212 WEITSLAEQPYQGLSNEQVLKFVMDG--GY-----------------------------------------------LDQ  242 (288)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcC--CC-----------------------------------------------CCC
Confidence            99998 78899776554433322110  00                                               001


Q ss_pred             cCCchhHHHHHHHHccccCCCCCCCHHHHhc------CCCCCCC
Q 013678          388 VDHSAGDLIDLLQGLLRYDPAERLKAREALR------HPFFTRD  425 (438)
Q Consensus       388 ~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~------hp~f~~~  425 (438)
                      ....+..+.+++.+||+.||++|||+.++++      ||||.+.
T Consensus       243 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~  286 (288)
T cd05061         243 PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV  286 (288)
T ss_pred             CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence            1233568999999999999999999999987      9999864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=2.6e-41  Score=312.71  Aligned_cols=245  Identities=22%  Similarity=0.339  Sum_probs=196.2

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      ++|++.+.||+|+||.||+|.+.. +..||+|.+.......+.+.+|+.+++.+.|+|+     +++++++.....+++|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv   77 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKL-----VQLYGVCTKQRPIYIV   77 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCe-----eeEEEEEccCCCcEEE
Confidence            468999999999999999998754 4459999987655555678899999999988777     9999999988899999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||+ +++|.+++.... ..+++..++.++.||+.||.|||+.||+|+||||+||+++.++.                  
T Consensus        78 ~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~------------------  138 (256)
T cd05113          78 TEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGC------------------  138 (256)
T ss_pred             EEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCC------------------
Confidence            9999 899999997654 36899999999999999999999999999999999999976654                  


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  325 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~  325 (438)
                               +||+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+
T Consensus       139 ---------~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~  209 (256)
T cd05113         139 ---------VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE  209 (256)
T ss_pred             ---------EEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence                     5666666554332211    11234567999999998889999999999999999998 999997766544


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+......                                                 ......+..+.+++.+||+.
T Consensus       210 ~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~li~~cl~~  240 (256)
T cd05113         210 TVEKVSQGLRL-------------------------------------------------YRPHLASEKVYAIMYSCWHE  240 (256)
T ss_pred             HHHHHhcCCCC-------------------------------------------------CCCCCCCHHHHHHHHHHcCC
Confidence            44333221100                                                 00112356899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q 013678          406 DPAERLKAREALRH  419 (438)
Q Consensus       406 dP~~Rpta~ell~h  419 (438)
                      ||.+|||+.+++++
T Consensus       241 ~p~~Rp~~~~ll~~  254 (256)
T cd05113         241 KAEERPTFQQLLSS  254 (256)
T ss_pred             CcccCCCHHHHHHh
Confidence            99999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.6e-41  Score=313.59  Aligned_cols=246  Identities=22%  Similarity=0.352  Sum_probs=199.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      .++|++.+.||+|+||.||+|.+. +++.||+|.++......+.+.+|+.++++++|+|+     +++++++...+..|+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~l   78 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKL-----IQLYAVCTLEEPIYI   78 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCc-----cceeEEEecCCCeee
Confidence            467999999999999999999875 45679999997655556778899999999998877     999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||+ +++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.                 
T Consensus        79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~-----------------  141 (261)
T cd05068          79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNI-----------------  141 (261)
T ss_pred             eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCC-----------------
Confidence            99999 999999998755457899999999999999999999999999999999999977664                 


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCCC-ccc---ccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQDH-SYV---VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL  324 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~---~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~  324 (438)
                                ++|+|||++....... ...   ..+..|+|||.+.+..++.++|||||||++|+|++ |+.||.+....
T Consensus       142 ----------~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~  211 (261)
T cd05068         142 ----------CKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA  211 (261)
T ss_pred             ----------EEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence                      5556665554432211 111   22357999999998889999999999999999999 99999876655


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      .....+..... .                                                ......+..+.+++.+||+
T Consensus       212 ~~~~~~~~~~~-~------------------------------------------------~~~~~~~~~~~~li~~~l~  242 (261)
T cd05068         212 EVLQQVDQGYR-M------------------------------------------------PCPPGCPKELYDIMLDCWK  242 (261)
T ss_pred             HHHHHHHcCCC-C------------------------------------------------CCCCcCCHHHHHHHHHHhh
Confidence            54443322100 0                                                0112345689999999999


Q ss_pred             cCCCCCCCHHHHhc
Q 013678          405 YDPAERLKAREALR  418 (438)
Q Consensus       405 ~dP~~Rpta~ell~  418 (438)
                      .||++||++.++++
T Consensus       243 ~~P~~Rp~~~~l~~  256 (261)
T cd05068         243 EDPDDRPTFETLQW  256 (261)
T ss_pred             cCcccCCCHHHHHH
Confidence            99999999999874

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=2.1e-41  Score=314.07  Aligned_cols=246  Identities=25%  Similarity=0.359  Sum_probs=196.7

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ..++|++.++||+|+||.||+|.+. ++..||+|.+.......+.+.+|+.+++.++|+++     +++++++.. ...+
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i-----~~~~~~~~~-~~~~   76 (260)
T cd05070           4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKL-----VQLYAVVSE-EPIY   76 (260)
T ss_pred             chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCce-----EEEEeEECC-CCcE
Confidence            3468999999999999999999875 55669999997655556778999999999998877     999988754 5689


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++.                
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~----------------  140 (260)
T cd05070          77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLV----------------  140 (260)
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCce----------------
Confidence            999999 899999998755456899999999999999999999999999999999999977654                


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCh
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN  323 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~  323 (438)
                                 ++|+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+.
T Consensus       141 -----------~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~  209 (260)
T cd05070         141 -----------CKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN  209 (260)
T ss_pred             -----------EEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence                       5566666554432211    11234567999999988889999999999999999999 8999987665


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .+....+.... .                                                .......+..+.+|+.+||
T Consensus       210 ~~~~~~~~~~~-~------------------------------------------------~~~~~~~~~~~~~li~~~l  240 (260)
T cd05070         210 REVLEQVERGY-R------------------------------------------------MPCPQDCPISLHELMLQCW  240 (260)
T ss_pred             HHHHHHHHcCC-C------------------------------------------------CCCCCcCCHHHHHHHHHHc
Confidence            55444332210 0                                                0112234668999999999


Q ss_pred             ccCCCCCCCHHHHhc
Q 013678          404 RYDPAERLKAREALR  418 (438)
Q Consensus       404 ~~dP~~Rpta~ell~  418 (438)
                      ..||++|||+.++++
T Consensus       241 ~~~p~~Rpt~~~l~~  255 (260)
T cd05070         241 KKDPEERPTFEYLQS  255 (260)
T ss_pred             ccCcccCcCHHHHHH
Confidence            999999999999874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=3.4e-41  Score=312.60  Aligned_cols=246  Identities=25%  Similarity=0.368  Sum_probs=198.8

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ..++|+++++||+|+||.||+|.+. +++.||+|.+.......+.+.+|+.+++.++|+++     +++++++. .+..+
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~-~~~~~   76 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRL-----VRLYAVVT-QEPIY   76 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCe-----eeEEEEEc-cCCcE
Confidence            4578999999999999999999864 56779999998766566788899999999988877     99988774 45789


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++.......+++..+..++.|++.||+|||+.|++||||||+||+++.++                 
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~-----------------  139 (260)
T cd05067          77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETL-----------------  139 (260)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCC-----------------
Confidence            999999 99999999876556789999999999999999999999999999999999997665                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCh
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN  323 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~  323 (438)
                                .++|+|||.+.......    ....++..|+|||++.+..++.++|||||||++|++++ |..||.+.+.
T Consensus       140 ----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~  209 (260)
T cd05067         140 ----------CCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN  209 (260)
T ss_pred             ----------CEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh
Confidence                      45666666654433111    11245678999999998889999999999999999999 9999987765


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .+....+......                                                 ......+.++.++|.+||
T Consensus       210 ~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~li~~~l  240 (260)
T cd05067         210 PEVIQNLERGYRM-------------------------------------------------PRPDNCPEELYELMRLCW  240 (260)
T ss_pred             HHHHHHHHcCCCC-------------------------------------------------CCCCCCCHHHHHHHHHHc
Confidence            5544433221100                                                 011234568999999999


Q ss_pred             ccCCCCCCCHHHHhc
Q 013678          404 RYDPAERLKAREALR  418 (438)
Q Consensus       404 ~~dP~~Rpta~ell~  418 (438)
                      +.||++|||++++++
T Consensus       241 ~~~p~~Rp~~~~l~~  255 (260)
T cd05067         241 KEKPEERPTFEYLRS  255 (260)
T ss_pred             cCChhhCCCHHHHHH
Confidence            999999999999876

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=2.7e-41  Score=317.79  Aligned_cols=262  Identities=27%  Similarity=0.444  Sum_probs=211.8

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      +.....|++.+.||+|+||.||+|.+..++..|++|++.......+.+.+|+.+++.++|+|+     +++++.+...+.
T Consensus        15 ~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~   89 (286)
T cd06614          15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNI-----VDYYDSYLVGDE   89 (286)
T ss_pred             CCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCe-----eEEEEEEEECCE
Confidence            345677999999999999999999998889999999997654456678899999999988877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      .|+|+||+ +++|.+++.... ..+++..+..++.|++.||.|||+.||+|+||||+||+++.++.              
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~--------------  154 (286)
T cd06614          90 LWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGS--------------  154 (286)
T ss_pred             EEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCC--------------
Confidence            99999999 899999998764 46999999999999999999999999999999999999977664              


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                   ++|+|||.+......   .....++..|+|||++.+..++.++|||||||++|+|++|..||...+.
T Consensus       155 -------------~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~  221 (286)
T cd06614         155 -------------VKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP  221 (286)
T ss_pred             -------------EEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH
Confidence                         555555554432211   1223578899999999888899999999999999999999999987655


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      ......+...  ..+.                                             ......++..+.+||.+||
T Consensus       222 ~~~~~~~~~~--~~~~---------------------------------------------~~~~~~~~~~l~~li~~~l  254 (286)
T cd06614         222 LRALFLITTK--GIPP---------------------------------------------LKNPEKWSPEFKDFLNKCL  254 (286)
T ss_pred             HHHHHHHHhc--CCCC---------------------------------------------CcchhhCCHHHHHHHHHHh
Confidence            4433322210  0000                                             0011124568999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          404 RYDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      +.||.+|||+.++++|+||++.-..+
T Consensus       255 ~~~p~~Rpt~~~il~~~~~~~~~~~~  280 (286)
T cd06614         255 VKDPEKRPSAEELLQHPFLKKACPKE  280 (286)
T ss_pred             ccChhhCcCHHHHhhChHhhccCchH
Confidence            99999999999999999999854443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=2.6e-41  Score=349.33  Aligned_cols=268  Identities=20%  Similarity=0.244  Sum_probs=199.3

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++.++||+|+||.||+|++..+++.||||+++..    ....+.+.+|+.++..++|+|+     +++++++.+++.
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNI-----Vkl~~v~~d~~~   76 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGI-----VPVYSICSDGDP   76 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCc-----CeEEEEEeeCCE
Confidence            5899999999999999999999999999999998642    2335678899999999998887     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNS---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      .|+||||+ |++|.+++....         ...++...+..++.||+.||+|||++||+||||||+|||++.+|.++++|
T Consensus        77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiD  156 (932)
T PRK13184         77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILD  156 (932)
T ss_pred             EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEe
Confidence            99999999 999999986421         12356677889999999999999999999999999999999888877777


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                      ||++..........      ........+............+||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus       157 FGLAk~i~~~~~~~------~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~P  230 (932)
T PRK13184        157 WGAAIFKKLEEEDL------LDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP  230 (932)
T ss_pred             cCcceecccccccc------cccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence            77765442211100      000000000000000111235799999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |...+.......  .... .|.                                            .......+++.+.+
T Consensus       231 F~~~~~~ki~~~--~~i~-~P~--------------------------------------------~~~p~~~iP~~L~~  263 (932)
T PRK13184        231 YRRKKGRKISYR--DVIL-SPI--------------------------------------------EVAPYREIPPFLSQ  263 (932)
T ss_pred             CCCcchhhhhhh--hhcc-Chh--------------------------------------------hccccccCCHHHHH
Confidence            976443222111  0000 000                                            00011245678999


Q ss_pred             HHHHccccCCCCCCCHHHHh
Q 013678          398 LLQGLLRYDPAERLKAREAL  417 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell  417 (438)
                      ++.+||+.||++|++..+.+
T Consensus       264 LI~rcL~~DP~kR~ss~eeL  283 (932)
T PRK13184        264 IAMKALAVDPAERYSSVQEL  283 (932)
T ss_pred             HHHHHccCChhhCcCHHHHH
Confidence            99999999999998765544

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=2.3e-41  Score=314.04  Aligned_cols=244  Identities=31%  Similarity=0.524  Sum_probs=198.7

Q ss_pred             eeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678          100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      ||.|+||.||++.+..+++.||+|++....    ...+.+.+|+.+++.+.|+|+     +++++.+..+...|+||||+
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~~~lv~e~~   75 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYV-----VKLYYSFQGKKNLYLVMEYL   75 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcch-----hHHHHheecCcEEEEEEecC
Confidence            689999999999999999999999986532    345667889999999988877     99999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCC
Q 013678          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  254 (438)
Q Consensus       176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~  254 (438)
                       +++|.+++.+..  .+++..+..++.||+.||+|||++||+|+||+|+||+++.++.                      
T Consensus        76 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~----------------------  131 (265)
T cd05579          76 PGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGH----------------------  131 (265)
T ss_pred             CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCC----------------------
Confidence             889999998755  7899999999999999999999999999999999999987665                      


Q ss_pred             CCCCCeEEecCCCCcccCC-----------CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          255 PKSSAIKLIDFGSTTFEHQ-----------DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       255 ~~~~~~kl~Dfg~a~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                           ++|+|||++.....           ......++..|+|||.+.+...+.++||||||+++|++++|..||.....
T Consensus       132 -----~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~  206 (265)
T cd05579         132 -----LKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP  206 (265)
T ss_pred             -----EEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH
Confidence                 45555555443221           11234678899999999888899999999999999999999999987665


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      ......+....                        ..++.                        ....+..+.+||.+||
T Consensus       207 ~~~~~~~~~~~------------------------~~~~~------------------------~~~~~~~~~~~i~~~l  238 (265)
T cd05579         207 EEIFQNILNGK------------------------IEWPE------------------------DVEVSDEAIDLISKLL  238 (265)
T ss_pred             HHHHHHHhcCC------------------------cCCCc------------------------cccCCHHHHHHHHHHh
Confidence            54443332210                        01111                        0113668899999999


Q ss_pred             ccCCCCCCCH---HHHhcCCCCCCC
Q 013678          404 RYDPAERLKA---REALRHPFFTRD  425 (438)
Q Consensus       404 ~~dP~~Rpta---~ell~hp~f~~~  425 (438)
                      +.||++|||+   .++|+||||++-
T Consensus       239 ~~~p~~Rpt~~~~~~~l~~~~~~~~  263 (265)
T cd05579         239 VPDPEKRLGAKSIEEIKNHPFFKGI  263 (265)
T ss_pred             cCCHhhcCCCccHHHHhcCccccCC
Confidence            9999999999   999999999853

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=4.9e-41  Score=314.55  Aligned_cols=250  Identities=20%  Similarity=0.315  Sum_probs=195.7

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEEC-----CCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecce
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~  161 (438)
                      ...++|++.+.||+|+||.||+|.+.     .++..||+|++....  .....+.+|+.+++.++|+|+     ++++++
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----v~~~~~   77 (277)
T cd05062           3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV-----VRLLGV   77 (277)
T ss_pred             ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCe-----eeEEEE
Confidence            34678999999999999999999864     245679999986432  234567889999999988777     999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCC--------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcc
Q 013678          162 FDYRNHICIVFEKL-GPSLYDFLRKNSY--------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY  232 (438)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~  232 (438)
                      +..+...++||||+ +++|.+++.....        ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.
T Consensus        78 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~  157 (277)
T cd05062          78 VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT  157 (277)
T ss_pred             EcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCC
Confidence            99999999999999 9999999975321        23577889999999999999999999999999999999976654


Q ss_pred             cccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHH
Q 013678          233 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI  307 (438)
Q Consensus       233 ~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i  307 (438)
                                                 ++|+|||++.......     ....++..|+|||++.+..++.++|||||||+
T Consensus       158 ---------------------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  210 (277)
T cd05062         158 ---------------------------VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV  210 (277)
T ss_pred             ---------------------------EEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHH
Confidence                                       5666666554332211     11245678999999998889999999999999


Q ss_pred             HHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhh
Q 013678          308 LVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ  386 (438)
Q Consensus       308 l~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (438)
                      +|||++ |..||.+.........+...  ..+                                               .
T Consensus       211 l~el~~~~~~p~~~~~~~~~~~~~~~~--~~~-----------------------------------------------~  241 (277)
T cd05062         211 LWEIATLAEQPYQGMSNEQVLRFVMEG--GLL-----------------------------------------------D  241 (277)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHcC--CcC-----------------------------------------------C
Confidence            999999 78999876654444332211  000                                               0


Q ss_pred             ccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       387 ~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      .....+..+.+++.+||+.||++|||+.|++++
T Consensus       242 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         242 KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            112345689999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.4e-41  Score=310.50  Aligned_cols=244  Identities=22%  Similarity=0.317  Sum_probs=200.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      ..|++.+.||.|+||.||+|...  ++.||+|.+.......+.+.+|+.+++.++|+|+     +++++++.+.+..++|
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~v   78 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNL-----VQLLGVVLQGNPLYIV   78 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcce-----eeeEEEEcCCCCeEEE
Confidence            56889999999999999999864  7889999998655556778899999999988877     9999999988999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||+ +++|.+++.......+++..++.++.|++.||.|||++||+|+||||+||+++.++                   
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~-------------------  139 (256)
T cd05039          79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDL-------------------  139 (256)
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCC-------------------
Confidence            9999 89999999876545799999999999999999999999999999999999997665                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM  329 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~  329 (438)
                              .++|+|||.+...........++..|+|||.+.+..++.++|||||||++|++++ |..||......+....
T Consensus       140 --------~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~  211 (256)
T cd05039         140 --------VAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPH  211 (256)
T ss_pred             --------CEEEcccccccccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence                    4667777766655333333344667999999988889999999999999999997 9999976654443322


Q ss_pred             HHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCC
Q 013678          330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  409 (438)
Q Consensus       330 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  409 (438)
                      +....                                                 ........++.+.++|.+||..||++
T Consensus       212 ~~~~~-------------------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~  242 (256)
T cd05039         212 VEKGY-------------------------------------------------RMEAPEGCPPEVYKVMKDCWELDPAK  242 (256)
T ss_pred             HhcCC-------------------------------------------------CCCCccCCCHHHHHHHHHHhccChhh
Confidence            21100                                                 00112244678999999999999999


Q ss_pred             CCCHHHHhc
Q 013678          410 RLKAREALR  418 (438)
Q Consensus       410 Rpta~ell~  418 (438)
                      |||+.|+++
T Consensus       243 Rp~~~~l~~  251 (256)
T cd05039         243 RPTFKQLRE  251 (256)
T ss_pred             CcCHHHHHH
Confidence            999999986

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.6e-41  Score=312.68  Aligned_cols=245  Identities=21%  Similarity=0.322  Sum_probs=197.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      .+|++.+.||+|+||.||+|.+. ++..+|+|++.........+.+|+.+++.+.|+|+     +++++++...+..|+|
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~lv   77 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNL-----VQLYGVCTKQRPIFIV   77 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCE-----EEEEEEEcCCCceEEE
Confidence            35789999999999999999876 45679999987655555678889999999988776     9999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||+ +++|.+++..+. ..+++..+..++.||+.||+|||++||+||||||+||+++.++.                  
T Consensus        78 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~------------------  138 (256)
T cd05059          78 TEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNV------------------  138 (256)
T ss_pred             EecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCc------------------
Confidence            9999 999999997654 36899999999999999999999999999999999999976664                  


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCCCc-c---cccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQDHS-Y---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  325 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~~~-~---~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~  325 (438)
                               +||+|||.+........ .   ..++..|+|||.+.+..++.++|||||||++|++++ |..||...+..+
T Consensus       139 ---------~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  209 (256)
T cd05059         139 ---------VKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE  209 (256)
T ss_pred             ---------EEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence                     56666665554322111 1   123457999999998889999999999999999999 899998766554


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+.....                                                 .......+.++.+++.+||..
T Consensus       210 ~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~li~~cl~~  240 (256)
T cd05059         210 VVESVSAGYR-------------------------------------------------LYRPKLAPTEVYTIMYSCWHE  240 (256)
T ss_pred             HHHHHHcCCc-------------------------------------------------CCCCCCCCHHHHHHHHHHhcC
Confidence            4433321100                                                 011123567899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q 013678          406 DPAERLKAREALRH  419 (438)
Q Consensus       406 dP~~Rpta~ell~h  419 (438)
                      +|++|||+.|+++.
T Consensus       241 ~p~~Rpt~~~~l~~  254 (256)
T cd05059         241 KPEDRPAFKKLLSQ  254 (256)
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=1.3e-41  Score=315.56  Aligned_cols=246  Identities=23%  Similarity=0.339  Sum_probs=200.5

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh-hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ...|++.++||.|+||.||+|.+.. ++.+|+|++..... ....+.+|+.+++.++|+++     +++++++.+.+..+
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   78 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHL-----ISLFAVCSVGEPVY   78 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcch-----hheeeeEecCCCeE
Confidence            3568999999999999999999877 88899999876544 45678889999999988877     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++.                
T Consensus        79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~----------------  142 (261)
T cd05148          79 IITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLV----------------  142 (261)
T ss_pred             EEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCce----------------
Confidence            999999 899999998765567899999999999999999999999999999999999987664                


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL  324 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~  324 (438)
                                 ++|+|||.+.......   ....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..
T Consensus       143 -----------~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~  211 (261)
T cd05148         143 -----------CKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH  211 (261)
T ss_pred             -----------EEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH
Confidence                       4555555554332211   11234667999999988889999999999999999998 89999876655


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +.+..+.....                                                 .......++.+.+++.+||+
T Consensus       212 ~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~~i~~~l~  242 (261)
T cd05148         212 EVYDQITAGYR-------------------------------------------------MPCPAKCPQEIYKIMLECWA  242 (261)
T ss_pred             HHHHHHHhCCc-------------------------------------------------CCCCCCCCHHHHHHHHHHcC
Confidence            54444332100                                                 01123456789999999999


Q ss_pred             cCCCCCCCHHHHhc
Q 013678          405 YDPAERLKAREALR  418 (438)
Q Consensus       405 ~dP~~Rpta~ell~  418 (438)
                      .||.+|||+.++++
T Consensus       243 ~~p~~Rpt~~~l~~  256 (261)
T cd05148         243 AEPEDRPSFKALRE  256 (261)
T ss_pred             CCchhCcCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-42  Score=331.75  Aligned_cols=248  Identities=29%  Similarity=0.432  Sum_probs=203.8

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +.+.|.+...+|.|+|+.|-.+.+..+++..++|++.+.   ..+..+|+.++....+    |+|++++++.+.++.+.|
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~~----h~niv~~~~v~~~~~~~~  392 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVRD----HPNIVKSHDVYEDGKEIY  392 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhhcC----CCcceeecceecCCceee
Confidence            567889999999999999999999999999999999764   2334567766666542    245599999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe-cCcccccCCccccccCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV-SAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~-~~~~~kl~df~l~~~~~~~  247 (438)
                      +|||++ |+-|.+.+....  .+. ..+..|+.+|+.|+.|||++|||||||||+|||++ ..|                
T Consensus       393 ~v~e~l~g~ell~ri~~~~--~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g----------------  453 (612)
T KOG0603|consen  393 LVMELLDGGELLRRIRSKP--EFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAG----------------  453 (612)
T ss_pred             eeehhccccHHHHHHHhcc--hhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCC----------------
Confidence            999999 888877777654  233 77888999999999999999999999999999994 433                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  327 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~  327 (438)
                                 .++|+|||.+........+.+-|..|.|||++...+|+.++||||||++||+|++|+.||.......  
T Consensus       454 -----------~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~--  520 (612)
T KOG0603|consen  454 -----------HLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI--  520 (612)
T ss_pred             -----------cEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH--
Confidence                       6889999988877666545567899999999999999999999999999999999999998766652  


Q ss_pred             HHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCC
Q 013678          328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  407 (438)
Q Consensus       328 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  407 (438)
                       .+...++..+                                                ....+|+++++||++||+.||
T Consensus       521 -ei~~~i~~~~------------------------------------------------~s~~vS~~AKdLl~~LL~~dP  551 (612)
T KOG0603|consen  521 -EIHTRIQMPK------------------------------------------------FSECVSDEAKDLLQQLLQVDP  551 (612)
T ss_pred             -HHHHhhcCCc------------------------------------------------cccccCHHHHHHHHHhccCCh
Confidence             2222221111                                                114568899999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCC
Q 013678          408 AERLKAREALRHPFFTRD  425 (438)
Q Consensus       408 ~~Rpta~ell~hp~f~~~  425 (438)
                      .+|+++.+++.||||.+.
T Consensus       552 ~~Rl~~~~i~~h~w~~~~  569 (612)
T KOG0603|consen  552 ALRLGADEIGAHPWFLSH  569 (612)
T ss_pred             hhCcChhhhccCcchhcC
Confidence            999999999999999443

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=6.3e-41  Score=309.70  Aligned_cols=249  Identities=30%  Similarity=0.523  Sum_probs=204.9

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +|++.+.||.|+||.||++.+..+++.||+|++....   .....+.+|+++++.++|+|+     +++.+.+......+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~-----~~~~~~~~~~~~~~   75 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNI-----IKYYESFEEKGKLC   75 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCCh-----hheEEEEecCCEEE
Confidence            5899999999999999999999999999999987532   455678889999999998877     99999999889999


Q ss_pred             EEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||+ +++|.+++....  ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.              
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~--------------  141 (258)
T cd08215          76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGL--------------  141 (258)
T ss_pred             EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCc--------------
Confidence            999999 889999998642  357999999999999999999999999999999999999976654              


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                   ++|+|||.+......   .....|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...+.
T Consensus       142 -------------~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~  208 (258)
T cd08215         142 -------------VKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL  208 (258)
T ss_pred             -------------EEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH
Confidence                         566666655443322   1224688899999999888899999999999999999999999977654


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .+....+....  .                                               .......+..+.+++.+||
T Consensus       209 ~~~~~~~~~~~--~-----------------------------------------------~~~~~~~~~~~~~~i~~~l  239 (258)
T cd08215         209 LELALKILKGQ--Y-----------------------------------------------PPIPSQYSSELRNLVSSLL  239 (258)
T ss_pred             HHHHHHHhcCC--C-----------------------------------------------CCCCCCCCHHHHHHHHHHc
Confidence            43333221110  0                                               0111244668999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCC
Q 013678          404 RYDPAERLKAREALRHPFF  422 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~f  422 (438)
                      ..||++|||+.++|+||||
T Consensus       240 ~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         240 QKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             CCChhhCcCHHHHhcCCCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.4e-41  Score=308.41  Aligned_cols=247  Identities=30%  Similarity=0.448  Sum_probs=205.3

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +|++.+.||+|++|.||++.+..+++.|++|.+....   ...+.+.+|++++.++.|+++     +++++++.+.+..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   75 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNI-----VKYIGSIETSDSLY   75 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCc-----cEEEEEEEeCCEEE
Confidence            5889999999999999999999999999999987644   355678899999999988877     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++....  .+++..+..++.|++.||.|||++||+||||||+||+++.++                 
T Consensus        76 ~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~-----------------  136 (254)
T cd06627          76 IILEYAENGSLRQIIKKFG--PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDG-----------------  136 (254)
T ss_pred             EEEecCCCCcHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCC-----------------
Confidence            999999 889999998764  799999999999999999999999999999999999997655                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCCc---ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDHS---YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                .++|+|||.+........   ...++..|+|||.+.+..++.++||||||+++|+|++|..||...+...
T Consensus       137 ----------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~  206 (254)
T cd06627         137 ----------VVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA  206 (254)
T ss_pred             ----------CEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence                      466777776655433322   3467889999999988888999999999999999999999997655433


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+...  ..                                               .......+..+.++|.+||..
T Consensus       207 ~~~~~~~~--~~-----------------------------------------------~~~~~~~~~~~~~~i~~~l~~  237 (254)
T cd06627         207 ALFRIVQD--DH-----------------------------------------------PPLPEGISPELKDFLMQCFQK  237 (254)
T ss_pred             HHHHHhcc--CC-----------------------------------------------CCCCCCCCHHHHHHHHHHHhC
Confidence            33222110  00                                               011234567899999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 013678          406 DPAERLKAREALRHPFF  422 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f  422 (438)
                      ||++|||+.+++.||||
T Consensus       238 ~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         238 DPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             ChhhCcCHHHHhcCCCC
Confidence            99999999999999998

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=1.9e-41  Score=325.93  Aligned_cols=248  Identities=21%  Similarity=0.323  Sum_probs=191.4

Q ss_pred             CceEEEeeeeeecceEEEEEEEC-----CCCcEEEEEEeecch--hhHHHHHHHHHHHHHH-HhcCCCCcceEEecceec
Q 013678           92 PRCKILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~  163 (438)
                      ++|++.+.||+|+||.||+|.+.     .+++.||+|+++...  ...+.+..|+.++.++ .|+|+     +++++++.
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~ni-----v~~~~~~~   81 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNV-----VNLLGACT   81 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcch-----hheeeeEe
Confidence            58999999999999999999743     345789999987432  2345677899999999 67776     99999775


Q ss_pred             c-CCeEEEEEccC-CCCHHHHHHhcCC-----------------------------------------------------
Q 013678          164 Y-RNHICIVFEKL-GPSLYDFLRKNSY-----------------------------------------------------  188 (438)
Q Consensus       164 ~-~~~~~lv~e~~-~~~L~~~l~~~~~-----------------------------------------------------  188 (438)
                      . +..++++|||+ +++|.+++.....                                                     
T Consensus        82 ~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (337)
T cd05054          82 KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE  161 (337)
T ss_pred             cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence            4 46799999999 9999999864321                                                     


Q ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEE
Q 013678          189 ------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL  262 (438)
Q Consensus       189 ------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl  262 (438)
                            ..+++..+..++.||+.||+|||++||+||||||+|||++.++                           .++|
T Consensus       162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~---------------------------~vkL  214 (337)
T cd05054         162 GDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENN---------------------------VVKI  214 (337)
T ss_pred             hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCC---------------------------cEEE
Confidence                  2578999999999999999999999999999999999997655                           4666


Q ss_pred             ecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCC
Q 013678          263 IDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGP  336 (438)
Q Consensus       263 ~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~  336 (438)
                      +|||++.......     ....++..|+|||++.+..++.++|||||||++|||++ |..||.+....+.+...... +.
T Consensus       215 ~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~  293 (337)
T cd05054         215 CDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE-GT  293 (337)
T ss_pred             eccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc-cC
Confidence            6666665432211     12345678999999999999999999999999999998 99999764332222111100 00


Q ss_pred             CChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHH
Q 013678          337 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREA  416 (438)
Q Consensus       337 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~el  416 (438)
                                                                     ........++++.+++.+||+.+|++|||+.|+
T Consensus       294 -----------------------------------------------~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~el  326 (337)
T cd05054         294 -----------------------------------------------RMRAPEYATPEIYSIMLDCWHNNPEDRPTFSEL  326 (337)
T ss_pred             -----------------------------------------------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence                                                           000112345689999999999999999999999


Q ss_pred             hcC
Q 013678          417 LRH  419 (438)
Q Consensus       417 l~h  419 (438)
                      ++|
T Consensus       327 l~~  329 (337)
T cd05054         327 VEI  329 (337)
T ss_pred             HHH
Confidence            875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=1.2e-40  Score=306.51  Aligned_cols=249  Identities=29%  Similarity=0.515  Sum_probs=206.5

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh-hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      .|.+.+.||+|++|.||++.+..+++.|++|++..... ....+.+|+.+++.+.|+++     +++++++......+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~l~   75 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNI-----VKYYGSYLKKDELWIV   75 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCE-----eEEEEEEecCCeEEEE
Confidence            37889999999999999999998999999999976443 56778899999999988776     9999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      +||+ +++|.+++.... ..+++..+..++.|++.||.+||++|++||||+|+||+++.++                   
T Consensus        76 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~-------------------  135 (253)
T cd05122          76 MEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDG-------------------  135 (253)
T ss_pred             EecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCC-------------------
Confidence            9999 799999998753 4689999999999999999999999999999999999997654                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  328 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~  328 (438)
                              .++|+|||.+.......  ....++..|+|||.+.+..++.++||||||+++|+|++|..||...+......
T Consensus       136 --------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~  207 (253)
T cd05122         136 --------EVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF  207 (253)
T ss_pred             --------eEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH
Confidence                    57778887776654432  44578899999999998888999999999999999999999998765444333


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+..  ...+.                                             ......++..+.++|.+||+.||+
T Consensus       208 ~~~~--~~~~~---------------------------------------------~~~~~~~~~~~~~~i~~~l~~~p~  240 (253)
T cd05122         208 KIAT--NGPPG---------------------------------------------LRNPEKWSDEFKDFLKKCLQKNPE  240 (253)
T ss_pred             HHHh--cCCCC---------------------------------------------cCcccccCHHHHHHHHHHccCChh
Confidence            3221  00000                                             000112356899999999999999


Q ss_pred             CCCCHHHHhcCCC
Q 013678          409 ERLKAREALRHPF  421 (438)
Q Consensus       409 ~Rpta~ell~hp~  421 (438)
                      +|||+.|+++|||
T Consensus       241 ~R~t~~~~l~~~~  253 (253)
T cd05122         241 KRPTAEQLLKHPF  253 (253)
T ss_pred             hCCCHHHHhcCCC
Confidence            9999999999999

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=6.2e-41  Score=310.93  Aligned_cols=245  Identities=25%  Similarity=0.354  Sum_probs=196.1

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      .++|++.++||+|+||.||+|.+..++ .||+|.+.......+.+.+|+.+++.+.|+++     +++++++.. +..++
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~-~~~~~   77 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKL-----VPLYAVVSE-EPIYI   77 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCccHHHHHHHHHHHHhCCCCCe-----eeEEEEEcC-CCcEE
Confidence            367999999999999999999876554 59999987655556778899999999988877     888888754 56899


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||+ +++|.+++.......+++..+..++.||+.||.|||+.||+|+||||+||+++.++                  
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~------------------  139 (260)
T cd05069          78 VTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNL------------------  139 (260)
T ss_pred             EEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC------------------
Confidence            99999 88999999875545689999999999999999999999999999999999997655                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL  324 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~  324 (438)
                               .++|+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.+....
T Consensus       140 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~  210 (260)
T cd05069         140 ---------VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR  210 (260)
T ss_pred             ---------eEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence                     45666666665432221    11245678999999988889999999999999999999 99999876655


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +....+.... ..                                                ......+..+.+++.+||.
T Consensus       211 ~~~~~~~~~~-~~------------------------------------------------~~~~~~~~~~~~li~~~l~  241 (260)
T cd05069         211 EVLEQVERGY-RM------------------------------------------------PCPQGCPESLHELMKLCWK  241 (260)
T ss_pred             HHHHHHHcCC-CC------------------------------------------------CCCcccCHHHHHHHHHHcc
Confidence            5444332210 00                                                0112345689999999999


Q ss_pred             cCCCCCCCHHHHhc
Q 013678          405 YDPAERLKAREALR  418 (438)
Q Consensus       405 ~dP~~Rpta~ell~  418 (438)
                      .||++||+++++++
T Consensus       242 ~~p~~Rp~~~~i~~  255 (260)
T cd05069         242 KDPDERPTFEYIQS  255 (260)
T ss_pred             CCcccCcCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=2.8e-41  Score=318.54  Aligned_cols=253  Identities=26%  Similarity=0.450  Sum_probs=203.6

Q ss_pred             EEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEc
Q 013678           95 KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (438)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e  173 (438)
                      ....+||+|+||.||++.+..+++.||||++.... .....+.+|+.+++.++|+|+     +++++.+..+++.++|||
T Consensus        23 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~lv~e   97 (292)
T cd06657          23 DNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV-----VEMYNSYLVGDELWVVME   97 (292)
T ss_pred             hhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcch-----hheeeEEEeCCEEEEEEe
Confidence            34478999999999999999999999999986422 344567889999999988877     999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCccc
Q 013678          174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  252 (438)
Q Consensus       174 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~  252 (438)
                      |+ +++|.+++...   .+++..++.++.|++.||+|||++||+|+||||+||+++.++.                    
T Consensus        98 ~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~--------------------  154 (292)
T cd06657          98 FLEGGALTDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGR--------------------  154 (292)
T ss_pred             cCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC--------------------
Confidence            99 88999987543   5899999999999999999999999999999999999977664                    


Q ss_pred             CCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013678          253 NLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  329 (438)
Q Consensus       253 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~  329 (438)
                             ++|+|||++......   .....|+..|+|||.+.+..++.++|+|||||++|+|++|..||.+.........
T Consensus       155 -------~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~  227 (292)
T cd06657         155 -------VKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM  227 (292)
T ss_pred             -------EEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                   555555554432211   1224678899999999888889999999999999999999999987665554443


Q ss_pred             HHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCC
Q 013678          330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  409 (438)
Q Consensus       330 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  409 (438)
                      +....   |.                                            .......++..+.++|.+||+.||.+
T Consensus       228 ~~~~~---~~--------------------------------------------~~~~~~~~~~~l~~li~~~l~~~P~~  260 (292)
T cd06657         228 IRDNL---PP--------------------------------------------KLKNLHKVSPSLKGFLDRLLVRDPAQ  260 (292)
T ss_pred             HHhhC---Cc--------------------------------------------ccCCcccCCHHHHHHHHHHHhCCccc
Confidence            32211   00                                            00011234668899999999999999


Q ss_pred             CCCHHHHhcCCCCCCCCCCc
Q 013678          410 RLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       410 Rpta~ell~hp~f~~~~~~~  429 (438)
                      ||++.++++||||......+
T Consensus       261 R~~~~~ll~~~~~~~~~~~~  280 (292)
T cd06657         261 RATAAELLKHPFLAKAGPPS  280 (292)
T ss_pred             CcCHHHHhcChHHhccCCCc
Confidence            99999999999999887533

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=5.3e-41  Score=310.59  Aligned_cols=243  Identities=22%  Similarity=0.324  Sum_probs=195.5

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEeccee-ccCCeEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF-DYRNHICI  170 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~-~~~~~~~l  170 (438)
                      .+|++.+.||+|+||.||++...  +..||+|.++.. ...+.+.+|+.+++.+.|+++     +++++++ ..++..++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~l   77 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNL-----VQLLGVIVEEKGGLYI   77 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC-chHHHHHHHHHHHHhCCCCCe-----eeEEEEEEcCCCceEE
Confidence            46899999999999999999754  777999998653 334568899999999988877     9999865 45668999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+||+++.++                  
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~------------------  139 (256)
T cd05082          78 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDN------------------  139 (256)
T ss_pred             EEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCC------------------
Confidence            99999 89999999876655689999999999999999999999999999999999997665                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA  328 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~  328 (438)
                               .+||+|||++...........++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+...
T Consensus       140 ---------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~  210 (256)
T cd05082         140 ---------VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP  210 (256)
T ss_pred             ---------cEEecCCccceeccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence                     4666777766554433333445668999999998889999999999999999997 999997655444333


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+....                                                 .......++..+.++|.+||+.||+
T Consensus       211 ~~~~~~-------------------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~  241 (256)
T cd05082         211 RVEKGY-------------------------------------------------KMDAPDGCPPVVYDVMKQCWHLDAA  241 (256)
T ss_pred             HHhcCC-------------------------------------------------CCCCCCCCCHHHHHHHHHHhcCChh
Confidence            322110                                                 0011234567899999999999999


Q ss_pred             CCCCHHHHhc
Q 013678          409 ERLKAREALR  418 (438)
Q Consensus       409 ~Rpta~ell~  418 (438)
                      +|||+.++++
T Consensus       242 ~Rpt~~~l~~  251 (256)
T cd05082         242 TRPSFLQLRE  251 (256)
T ss_pred             hCcCHHHHHH
Confidence            9999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=8.3e-41  Score=318.55  Aligned_cols=256  Identities=25%  Similarity=0.357  Sum_probs=205.5

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ..+.|...++||+|+||.||+|.+..+++.||+|++....    .....+.+|+.+++.++|+++     +++++++.+.
T Consensus        19 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~   93 (313)
T cd06633          19 PEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNT-----IEYKGCYLKE   93 (313)
T ss_pred             HHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCC-----ccEEEEEEeC
Confidence            3455778899999999999999999999999999986422    233457789999999988887     9999999999


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ...|+||||+.++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++              
T Consensus        94 ~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~--------------  158 (313)
T cd06633          94 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG--------------  158 (313)
T ss_pred             CEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCC--------------
Confidence            9999999999778888887543 4689999999999999999999999999999999999997655              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHh---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                   .++|+|||.+..... .....|+..|+|||++.   ...++.++|||||||++|+|++|..||...+
T Consensus       159 -------------~~kL~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~  224 (313)
T cd06633         159 -------------QVKLADFGSASKSSP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  224 (313)
T ss_pred             -------------CEEEeecCCCcccCC-CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                         467777776654322 23357889999999985   3457889999999999999999999997766


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      .......+...  ..|.                                              .....++..+.+||.+|
T Consensus       225 ~~~~~~~~~~~--~~~~----------------------------------------------~~~~~~~~~l~~li~~~  256 (313)
T cd06633         225 AMSALYHIAQN--DSPT----------------------------------------------LQSNEWTDSFRGFVDYC  256 (313)
T ss_pred             hHHHHHHHHhc--CCCC----------------------------------------------CCccccCHHHHHHHHHH
Confidence            54444333211  0000                                              00123455789999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      |+.+|.+||++.+++.||||.....
T Consensus       257 l~~~P~~Rp~~~~~l~~~~~~~~~~  281 (313)
T cd06633         257 LQKIPQERPASAELLRHDFVRRDRP  281 (313)
T ss_pred             ccCChhhCcCHHHHhcCcccCCCch
Confidence            9999999999999999999997543

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=3.8e-41  Score=310.80  Aligned_cols=239  Identities=21%  Similarity=0.352  Sum_probs=189.2

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      +.||+|+||.||+|.+..+++.||+|.+...  ......+.+|+.+++.++|+|+     +++++++...+..++||||+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv~e~~   75 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI-----VRLIGVCTQKQPIYIVMELV   75 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEcCCCCeEEEEeec
Confidence            4689999999999999999999999987643  2345678899999999988877     99999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCC
Q 013678          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  254 (438)
Q Consensus       176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~  254 (438)
                       +++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+                     
T Consensus        76 ~~~~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~---------------------  133 (252)
T cd05084          76 QGGDFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVL---------------------  133 (252)
T ss_pred             cCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcE---------------------
Confidence             999999997643 368999999999999999999999999999999999999776654                     


Q ss_pred             CCCCCeEEecCCCCcccCCCCc-----ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 013678          255 PKSSAIKLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA  328 (438)
Q Consensus       255 ~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~  328 (438)
                            +|+|||.+........     ...++..|+|||.+.+..++.++|||||||++|+|++ |..||..........
T Consensus       134 ------kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~  207 (252)
T cd05084         134 ------KISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTRE  207 (252)
T ss_pred             ------EECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHH
Confidence                  5555555443221110     1122456999999998889999999999999999998 889997655443322


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+....                       .                          .......+..+.+|+.+||+.||+
T Consensus       208 ~~~~~~-----------------------~--------------------------~~~~~~~~~~~~~li~~~l~~~p~  238 (252)
T cd05084         208 AIEQGV-----------------------R--------------------------LPCPELCPDAVYRLMERCWEYDPG  238 (252)
T ss_pred             HHHcCC-----------------------C--------------------------CCCcccCCHHHHHHHHHHcCCChh
Confidence            221100                       0                          011123466899999999999999


Q ss_pred             CCCCHHHHhc
Q 013678          409 ERLKAREALR  418 (438)
Q Consensus       409 ~Rpta~ell~  418 (438)
                      +|||+.++++
T Consensus       239 ~Rps~~~~~~  248 (252)
T cd05084         239 QRPSFSTVHQ  248 (252)
T ss_pred             hCcCHHHHHH
Confidence            9999999974

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=8.1e-41  Score=319.27  Aligned_cols=259  Identities=24%  Similarity=0.359  Sum_probs=207.6

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ....|...+.||+|+||.||++.+..++..||+|++....    .....+.+|+.+++.++|+|+     +++++++..+
T Consensus        23 ~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~   97 (317)
T cd06635          23 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNS-----IEYKGCYLRE   97 (317)
T ss_pred             chhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCE-----EEEEEEEeeC
Confidence            3455889999999999999999999999999999986432    233567789999999988877     9999999999


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      +..++||||+.++|.+++.... ..+++..+..++.||+.||.|||++||+||||+|+||+++.++              
T Consensus        98 ~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~--------------  162 (317)
T cd06635          98 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG--------------  162 (317)
T ss_pred             CeEEEEEeCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCC--------------
Confidence            9999999999778888876543 4689999999999999999999999999999999999996655              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHh---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                   .++|+|||++..... .....|+..|+|||.+.   +..++.++|||||||++|+|++|..||...+
T Consensus       163 -------------~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~  228 (317)
T cd06635         163 -------------QVKLADFGSASIASP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  228 (317)
T ss_pred             -------------CEEEecCCCccccCC-cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc
Confidence                         467777776654332 22346888999999985   3458899999999999999999999997765


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      .......+.......                                                .....++..+.+||.+|
T Consensus       229 ~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~l~~li~~~  260 (317)
T cd06635         229 AMSALYHIAQNESPT------------------------------------------------LQSNEWSDYFRNFVDSC  260 (317)
T ss_pred             HHHHHHHHHhccCCC------------------------------------------------CCCccccHHHHHHHHHH
Confidence            544443332211000                                                01123456789999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCCCce
Q 013678          403 LRYDPAERLKAREALRHPFFTRDVRRPT  430 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~~~~~~  430 (438)
                      |+.+|.+|||+.++++|+|+.....+..
T Consensus       261 l~~~p~~Rpt~~~il~~~~~~~~~~~~~  288 (317)
T cd06635         261 LQKIPQDRPTSEELLKHMFVLRERPETV  288 (317)
T ss_pred             ccCCcccCcCHHHHHhChhhhccCcccc
Confidence            9999999999999999999988766543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=5.1e-41  Score=315.47  Aligned_cols=247  Identities=21%  Similarity=0.331  Sum_probs=195.6

Q ss_pred             CceEEEeeeeeecceEEEEEEE----CCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           92 PRCKILSKMGEGTFGQVVECFD----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ..|++.++||+|+||.||+|.+    ..++..||+|.+....  .....+.+|+.+++.+.|+|+     +++++++..+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~   79 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNI-----VCLLGVVTQE   79 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCe-----eeEEEEEecC
Confidence            4689999999999999999985    3456789999986422  233567889999999988877     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNS---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  229 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~---------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  229 (438)
                      ...|+||||+ +++|.+++....               ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~  159 (283)
T cd05090          80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE  159 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcC
Confidence            9999999999 899999986432               124788899999999999999999999999999999999976


Q ss_pred             CcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHH
Q 013678          230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSV  304 (438)
Q Consensus       230 ~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  304 (438)
                      ++                           .++|+|||++......     .....++..|+|||.+.+..++.++|||||
T Consensus       160 ~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl  212 (283)
T cd05090         160 QL---------------------------HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSF  212 (283)
T ss_pred             CC---------------------------cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHH
Confidence            55                           4566666666543221     122345678999999988889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhh
Q 013678          305 GCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL  383 (438)
Q Consensus       305 G~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (438)
                      ||++|||++ |..||.+.+.......+.... .                                               
T Consensus       213 G~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~-----------------------------------------------  244 (283)
T cd05090         213 GVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQ-L-----------------------------------------------  244 (283)
T ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-c-----------------------------------------------
Confidence            999999998 999998766544433332110 0                                               


Q ss_pred             hhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       384 ~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                       ......++..+.+++.+||+.||++||++.+|+++
T Consensus       245 -~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         245 -LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             -CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence             01122456789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=4.1e-41  Score=319.25  Aligned_cols=247  Identities=21%  Similarity=0.279  Sum_probs=193.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcE--EEEEEeecc--hhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccCC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKEL--VAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~--vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ++|++.+.||+|+||.||+|.+..++..  +|+|.++..  ......+.+|+.++.++ +|+|+     +++++++..++
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~i-----v~~~~~~~~~~   81 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI-----INLLGACEHRG   81 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCc-----ceEEEEECCCC
Confidence            4689999999999999999998877754  577776532  23445678899999999 67776     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 013678          167 HICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  231 (438)
                      .+|+||||+ +++|.+++....              ...+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~  161 (303)
T cd05088          82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  161 (303)
T ss_pred             CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC
Confidence            999999999 999999997542              13578999999999999999999999999999999999997655


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcc--cccCCCcchhHHHhCCCCCcchhHHHHHHHHH
Q 013678          232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  309 (438)
Q Consensus       232 ~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  309 (438)
                                                 .++|+|||++.........  ..++..|+|||.+.+..++.++|||||||++|
T Consensus       162 ---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  214 (303)
T cd05088         162 ---------------------------VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW  214 (303)
T ss_pred             ---------------------------cEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHH
Confidence                                       4566666665432211111  12356799999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhcc
Q 013678          310 ELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  388 (438)
Q Consensus       310 ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (438)
                      +|++ |..||.+.+..+....+...   .                                              .....
T Consensus       215 ellt~g~~p~~~~~~~~~~~~~~~~---~----------------------------------------------~~~~~  245 (303)
T cd05088         215 EIVSLGGTPYCGMTCAELYEKLPQG---Y----------------------------------------------RLEKP  245 (303)
T ss_pred             HHHhcCCCCcccCChHHHHHHHhcC---C----------------------------------------------cCCCC
Confidence            9998 99999766554433222110   0                                              00011


Q ss_pred             CCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          389 DHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       389 ~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      ...+.++.+||.+||+.||++||++++++++
T Consensus       246 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         246 LNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            2345688999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=4.2e-41  Score=321.10  Aligned_cols=245  Identities=21%  Similarity=0.270  Sum_probs=193.2

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcE----EEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKEL----VAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+|++.+.||+|+||.||+|++..+++.    ||+|+++..  ....+.+.+|+.+++.+.|+|+     +++++++...
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----v~~~g~~~~~   81 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV-----CRLLGICLTS   81 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEcCC
Confidence            5699999999999999999998666554    899998643  2345678889999999999888     9999988764


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                       ..++|+||+ +|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.            
T Consensus        82 -~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~------------  147 (316)
T cd05108          82 -TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQH------------  147 (316)
T ss_pred             -CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCc------------
Confidence             577999999 999999998754 46889999999999999999999999999999999999976654            


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCCc-----ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALF  318 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf  318 (438)
                                     +||+|||++........     ...++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus       148 ---------------~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~  212 (316)
T cd05108         148 ---------------VKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY  212 (316)
T ss_pred             ---------------EEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence                           56666666654332211     1233567999999999899999999999999999998 99999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      .+....+....+ .....+                                                .....++.++.++
T Consensus       213 ~~~~~~~~~~~~-~~~~~~------------------------------------------------~~~~~~~~~~~~l  243 (316)
T cd05108         213 DGIPASEISSIL-EKGERL------------------------------------------------PQPPICTIDVYMI  243 (316)
T ss_pred             CCCCHHHHHHHH-hCCCCC------------------------------------------------CCCCCCCHHHHHH
Confidence            876544332211 110000                                                0112345678999


Q ss_pred             HHHccccCCCCCCCHHHHhcC
Q 013678          399 LQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~h  419 (438)
                      +.+||..||++|||+.+++.+
T Consensus       244 i~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         244 MVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999986

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=1.3e-40  Score=307.57  Aligned_cols=249  Identities=31%  Similarity=0.468  Sum_probs=204.1

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC--Ce
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--NH  167 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~--~~  167 (438)
                      +|++.+.||+|++|.||+|.+..+++.|++|++....   ...+.+.+|+.++++++|+++     +++++.+...  ..
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   75 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNI-----VRYYGSERDEEKNT   75 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCE-----eeEEEEEecCCCCe
Confidence            4788999999999999999999899999999987544   346778899999999998777     9999999888  89


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +++||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++               
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~---------------  138 (260)
T cd06606          76 LNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDG---------------  138 (260)
T ss_pred             EEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC---------------
Confidence            99999999 999999998765  799999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                  .++|+|||.+......     .....++..|+|||.+.+...+.++||||||+++|+|++|..||...
T Consensus       139 ------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  206 (260)
T cd06606         139 ------------VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSEL  206 (260)
T ss_pred             ------------CEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                        4566666665544332     22356888999999998888999999999999999999999999776


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      ++..  ..+.....                                             .......+...+..+.+||.+
T Consensus       207 ~~~~--~~~~~~~~---------------------------------------------~~~~~~~~~~~~~~l~~~i~~  239 (260)
T cd06606         207 GNPM--AALYKIGS---------------------------------------------SGEPPEIPEHLSEEAKDFLRK  239 (260)
T ss_pred             CchH--HHHHhccc---------------------------------------------cCCCcCCCcccCHHHHHHHHH
Confidence            5211  11111100                                             000011223346789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCC
Q 013678          402 LLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f  422 (438)
                      ||..||++||++.++++||||
T Consensus       240 ~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         240 CLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             hCcCChhhCCCHHHHhhCCCC
Confidence            999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=9.4e-41  Score=310.79  Aligned_cols=247  Identities=27%  Similarity=0.397  Sum_probs=196.4

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec----chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++.+.||+|+||.||+|++..+++.||||.++.    .......+.+|+.+++.++|+++     +++++++...+.
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~   76 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNV-----IKYLDSFIEDNE   76 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcce-----eeeeeeEEECCe
Confidence            579999999999999999999999999999998753    22334567889999999988877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          168 ICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      .++||||+ +++|.+++...  ....+++..+..++.||+.||.|||++||+|+||||+||+++.++             
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~-------------  143 (267)
T cd08228          77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATG-------------  143 (267)
T ss_pred             EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCC-------------
Confidence            99999999 89999988642  224589999999999999999999999999999999999997665             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                    .++|+|||.+.......   ....|+..|+|||.+.+..++.++||||||+++|+|++|..||...
T Consensus       144 --------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~  209 (267)
T cd08228         144 --------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             --------------CEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccc
Confidence                          45666666655433221   1246788999999999888999999999999999999999999654


Q ss_pred             Ch--HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          322 EN--LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       322 ~~--~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      ..  ......+.. .+.+|                                               ......+..+.++|
T Consensus       210 ~~~~~~~~~~~~~-~~~~~-----------------------------------------------~~~~~~~~~~~~li  241 (267)
T cd08228         210 KMNLFSLCQKIEQ-CDYPP-----------------------------------------------LPTEHYSEKLRELV  241 (267)
T ss_pred             cccHHHHHHHHhc-CCCCC-----------------------------------------------CChhhcCHHHHHHH
Confidence            32  111111111 00000                                               00113456789999


Q ss_pred             HHccccCCCCCCCHHHHhc
Q 013678          400 QGLLRYDPAERLKAREALR  418 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~  418 (438)
                      .+||..||++|||+.++++
T Consensus       242 ~~cl~~~p~~Rp~~~~vl~  260 (267)
T cd08228         242 SMCIYPDPDQRPDIGYVHQ  260 (267)
T ss_pred             HHHCCCCcccCcCHHHHHH
Confidence            9999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=8e-41  Score=314.96  Aligned_cols=246  Identities=22%  Similarity=0.350  Sum_probs=196.1

Q ss_pred             CceEEEeeeeeecceEEEEEEE-----CCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           92 PRCKILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+|.+.+.||+|+||.||++.+     ..++..+|+|.+.... .....+.+|+.+++.+.|+++     +++++++...
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~   79 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI-----VKFYGVCVEG   79 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEecC
Confidence            4689999999999999999985     3345679999986533 345678899999999988887     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccc
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNS-----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  233 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~  233 (438)
                      +.+++||||+ +++|.+++....           ...+++..+..++.||+.||+|||++||+||||||+||+++.++. 
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~-  158 (288)
T cd05093          80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL-  158 (288)
T ss_pred             CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc-
Confidence            9999999999 999999997542           124899999999999999999999999999999999999977664 


Q ss_pred             ccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHH
Q 013678          234 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL  308 (438)
Q Consensus       234 kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il  308 (438)
                                                ++|+|||.+.......     ....++..|+|||++.+..++.++|||||||++
T Consensus       159 --------------------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il  212 (288)
T cd05093         159 --------------------------VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL  212 (288)
T ss_pred             --------------------------EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHH
Confidence                                      5555555554332211     123456789999999988899999999999999


Q ss_pred             HHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhc
Q 013678          309 VELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH  387 (438)
Q Consensus       309 ~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (438)
                      |+|++ |..||......+....+...  ..                                               ...
T Consensus       213 ~~l~t~g~~p~~~~~~~~~~~~i~~~--~~-----------------------------------------------~~~  243 (288)
T cd05093         213 WEIFTYGKQPWYQLSNNEVIECITQG--RV-----------------------------------------------LQR  243 (288)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcC--Cc-----------------------------------------------CCC
Confidence            99998 99999877655544433221  00                                               001


Q ss_pred             cCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          388 VDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       388 ~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ....+.++.+|+.+||+.||.+|||+.++++
T Consensus       244 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         244 PRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            1234668999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-40  Score=308.63  Aligned_cols=247  Identities=26%  Similarity=0.336  Sum_probs=201.3

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ..++|++.++||+|+||.||+|.+. +++.||||.+.......+.+.+|+.+++.++|+++     +++++++......+
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~   77 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKL-----VQLYAVCSEEEPIY   77 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCE-----eeeeeeeecCCceE
Confidence            3478999999999999999999975 45779999998766666788999999999988777     99999999889999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++                 
T Consensus        78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~-----------------  140 (261)
T cd05034          78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENL-----------------  140 (261)
T ss_pred             EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCC-----------------
Confidence            999999 89999999876555799999999999999999999999999999999999997665                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCh
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN  323 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~  323 (438)
                                .++|+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|++++ |+.||.+.+.
T Consensus       141 ----------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~  210 (261)
T cd05034         141 ----------VCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN  210 (261)
T ss_pred             ----------CEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence                      45666666655433211    11234567999999998889999999999999999998 9999987766


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      ......+......                                                 ......+.++.+++.+||
T Consensus       211 ~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~i~~~l  241 (261)
T cd05034         211 REVLEQVERGYRM-------------------------------------------------PRPPNCPEELYDLMLQCW  241 (261)
T ss_pred             HHHHHHHHcCCCC-------------------------------------------------CCCCCCCHHHHHHHHHHc
Confidence            5555444321100                                                 011223568899999999


Q ss_pred             ccCCCCCCCHHHHhc
Q 013678          404 RYDPAERLKAREALR  418 (438)
Q Consensus       404 ~~dP~~Rpta~ell~  418 (438)
                      +.||++||+++++++
T Consensus       242 ~~~p~~Rp~~~~l~~  256 (261)
T cd05034         242 DKDPEERPTFEYLQS  256 (261)
T ss_pred             ccCcccCCCHHHHHH
Confidence            999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-40  Score=310.35  Aligned_cols=246  Identities=23%  Similarity=0.313  Sum_probs=196.6

Q ss_pred             CceEEEeeeeeecceEEEEEEECCC---CcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ++|++.+.||+|+||.||+|.+..+   ...||+|+++..  ......+.+|+.++..++|+|+     +++++++..++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   78 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNI-----IRLEGVVTKSR   78 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCc-----ceEeEEEecCC
Confidence            5789999999999999999988654   457999998643  2344667889999999998887     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ..++||||+ +++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.             
T Consensus        79 ~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~-------------  144 (266)
T cd05033          79 PVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLV-------------  144 (266)
T ss_pred             ceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCC-------------
Confidence            999999999 999999997654 36899999999999999999999999999999999999977664             


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCCCc-----ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQ  319 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~  319 (438)
                                    ++|+|||.+........     ...++..|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus       145 --------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~  210 (266)
T cd05033         145 --------------CKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYW  210 (266)
T ss_pred             --------------EEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCC
Confidence                          55555555544321110     1234568999999998889999999999999999998 999997


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      .....+....+..... .                                                .....++..+.+|+
T Consensus       211 ~~~~~~~~~~~~~~~~-~------------------------------------------------~~~~~~~~~l~~li  241 (266)
T cd05033         211 DMSNQDVIKAVEDGYR-L------------------------------------------------PPPMDCPSALYQLM  241 (266)
T ss_pred             CCCHHHHHHHHHcCCC-C------------------------------------------------CCCCCCCHHHHHHH
Confidence            6655544433322100 0                                                01123466899999


Q ss_pred             HHccccCCCCCCCHHHHhcC
Q 013678          400 QGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~h  419 (438)
                      .+||+.||++||++.|++++
T Consensus       242 ~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         242 LDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HHHcCCCcccCcCHHHHHHH
Confidence            99999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-43  Score=360.17  Aligned_cols=257  Identities=30%  Similarity=0.422  Sum_probs=211.0

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+.-||+-..+||.|.||.||-|.+..+|+..|+|-++.   ..+......+|+.++..|+|+|+     |+++++-.++
T Consensus      1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNl-----V~YyGVEvHR 1306 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNL-----VRYYGVEVHR 1306 (1509)
T ss_pred             cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccc-----cccCceeecH
Confidence            455678888999999999999999999999999997753   22334566789999999999998     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.++|.|||| +|+|.+++....  ..++...+.+..|++.||.|||++|||||||||+||+++.+|             
T Consensus      1307 ekv~IFMEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g------------- 1371 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNG------------- 1371 (1509)
T ss_pred             HHHHHHHHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCC-------------
Confidence            9999999999 999999998754  678888999999999999999999999999999999998766             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC-------cccccCCCcchhHHHhCC---CCCcchhHHHHHHHHHHHHhC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-------SYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg  314 (438)
                                    .+|++|||.|.......       ...+||+.|||||++.+.   +...++||||||||+.||+||
T Consensus      1372 --------------~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tG 1437 (1509)
T KOG4645|consen 1372 --------------LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATG 1437 (1509)
T ss_pred             --------------cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecC
Confidence                          56777777776544332       235899999999999875   366899999999999999999


Q ss_pred             CCCCCCCChHHH-HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchh
Q 013678          315 EALFQTHENLEH-LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  393 (438)
Q Consensus       315 ~~pf~~~~~~~~-~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (438)
                      +.||...++.-+ ...+.  .|..|                                               +.+..++.
T Consensus      1438 krPW~~~dne~aIMy~V~--~gh~P-----------------------------------------------q~P~~ls~ 1468 (1509)
T KOG4645|consen 1438 KRPWAELDNEWAIMYHVA--AGHKP-----------------------------------------------QIPERLSS 1468 (1509)
T ss_pred             CCchhhccchhHHHhHHh--ccCCC-----------------------------------------------CCchhhhH
Confidence            999976544322 22111  12111                                               12234677


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      +.++||.+||..||++|+++.|+|+|.|-+.....
T Consensus      1469 ~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d~ 1503 (1509)
T KOG4645|consen 1469 EGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTDE 1503 (1509)
T ss_pred             hHHHHHHHHHhcCchhhhHHHHHHHhhcccccccc
Confidence            89999999999999999999999999998876443

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=8.1e-41  Score=327.37  Aligned_cols=248  Identities=22%  Similarity=0.279  Sum_probs=192.4

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCC-----CcEEEEEEeecch--hhHHHHHHHHHHHHHHH-hcCCCCcceEEeccee
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWF  162 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~  162 (438)
                      .++|++.++||+|+||.||+|.+...     +..||||+++...  ...+.+.+|+.++..+. |+||     +++++++
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnI-----v~l~~~~  110 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNI-----VNLLGAC  110 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCe-----eeEEEEE
Confidence            35788999999999999999986433     3579999996432  33467889999999996 7776     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC------------------------------------------------------
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNS------------------------------------------------------  187 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~------------------------------------------------------  187 (438)
                      ...+.+||||||| +|+|.+++....                                                      
T Consensus       111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (400)
T cd05105         111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP  190 (400)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence            9999999999999 999999886531                                                      


Q ss_pred             ----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEE
Q 013678          188 ----------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL  227 (438)
Q Consensus       188 ----------------------------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli  227 (438)
                                                              ...+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill  270 (400)
T cd05105         191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL  270 (400)
T ss_pred             hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE
Confidence                                                    1247788889999999999999999999999999999999


Q ss_pred             ecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHH
Q 013678          228 VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLW  302 (438)
Q Consensus       228 ~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Diw  302 (438)
                      +.++                           .+||+|||++......     .....++..|+|||++.+..++.++|||
T Consensus       271 ~~~~---------------------------~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw  323 (400)
T cd05105         271 AQGK---------------------------IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVW  323 (400)
T ss_pred             eCCC---------------------------EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHH
Confidence            7655                           4566666666543221     1123567789999999998899999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccch
Q 013678          303 SVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP  381 (438)
Q Consensus       303 SlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (438)
                      ||||++|+|++ |..||.................                                              
T Consensus       324 SlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~----------------------------------------------  357 (400)
T cd05105         324 SYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGY----------------------------------------------  357 (400)
T ss_pred             HHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCC----------------------------------------------
Confidence            99999999997 9999976433222211111000                                              


Q ss_pred             hhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       382 ~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                        .......++.++.++|.+||+.||++|||+.++.+
T Consensus       358 --~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         358 --RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             --CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence              00112245678999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-40  Score=308.17  Aligned_cols=248  Identities=29%  Similarity=0.426  Sum_probs=197.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc------hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+|++.+.||+|+||.||+|++..+++.||+|.+...      ......+.+|+.+++.++|+++     +++++++.+.
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-----~~~~~~~~~~   76 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRI-----VQYYGCLRDP   76 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCc-----ceEEEEEEcC
Confidence            4689999999999999999999999999999987532      1233567889999999999887     9999988653


Q ss_pred             --CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          166 --NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       166 --~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                        +.+++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+|+||||+||+++.++.+         
T Consensus        77 ~~~~~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~---------  145 (264)
T cd06653          77 EEKKLSIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNV---------  145 (264)
T ss_pred             CCCEEEEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCE---------
Confidence              5789999999 899999998654  58999999999999999999999999999999999999776654         


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCC------CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~  316 (438)
                                        +|+|||.+.....      ......|+..|+|||.+.+..++.++|||||||++|+|++|+.
T Consensus       146 ------------------~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  207 (264)
T cd06653         146 ------------------KLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKP  207 (264)
T ss_pred             ------------------EECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCC
Confidence                              5555554443211      1122467889999999998889999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||...........+.   ....                                             ....+...++.+.
T Consensus       208 p~~~~~~~~~~~~~~---~~~~---------------------------------------------~~~~p~~~~~~~~  239 (264)
T cd06653         208 PWAEYEAMAAIFKIA---TQPT---------------------------------------------KPMLPDGVSDACR  239 (264)
T ss_pred             CCCccCHHHHHHHHH---cCCC---------------------------------------------CCCCCcccCHHHH
Confidence            997654433322221   1000                                             0012234567899


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCC
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      ++|.+||+ +|.+|||+.++++|||.
T Consensus       240 ~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         240 DFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             HHHHHHhc-CcccCccHHHHhcCCCC
Confidence            99999999 57999999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=1.2e-40  Score=315.26  Aligned_cols=247  Identities=22%  Similarity=0.300  Sum_probs=193.7

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCc--EEEEEEeecc--hhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccCC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKE--LVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ++|++.+.||+|+||.||+|.+..++.  .+++|.++..  ....+.+.+|+.++.++ .|+++     +++++++...+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i-----v~~~~~~~~~~   76 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNI-----INLLGACENRG   76 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCch-----hheEEEEccCC
Confidence            468999999999999999999877764  4788887632  23445678899999999 56766     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 013678          167 HICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  231 (438)
                      .+|+||||+ +++|.+++....              ...+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~  156 (297)
T cd05089          77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENL  156 (297)
T ss_pred             cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCC
Confidence            999999999 899999997532              12488899999999999999999999999999999999997655


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcc--cccCCCcchhHHHhCCCCCcchhHHHHHHHHH
Q 013678          232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  309 (438)
Q Consensus       232 ~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  309 (438)
                                                 .+||+|||++.........  ...+..|+|||++.+..++.++|||||||++|
T Consensus       157 ---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~  209 (297)
T cd05089         157 ---------------------------ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLW  209 (297)
T ss_pred             ---------------------------eEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHH
Confidence                                       4566666665432211111  12245799999999888999999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhcc
Q 013678          310 ELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  388 (438)
Q Consensus       310 ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (438)
                      ||++ |..||......+....+.....                                                 ...+
T Consensus       210 el~t~g~~pf~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~  240 (297)
T cd05089         210 EIVSLGGTPYCGMTCAELYEKLPQGYR-------------------------------------------------MEKP  240 (297)
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHhcCCC-------------------------------------------------CCCC
Confidence            9997 9999987665544433221100                                                 0111


Q ss_pred             CCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          389 DHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       389 ~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      ..++..+.+||.+||+.||.+|||++++++.
T Consensus       241 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         241 RNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            2456789999999999999999999999654

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=9.3e-41  Score=315.26  Aligned_cols=248  Identities=21%  Similarity=0.334  Sum_probs=195.9

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCC-----CcEEEEEEeecch--hhHHHHHHHHHHHHHH-HhcCCCCcceEEeccee
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~  162 (438)
                      .++|++.+.||+|+||.||++.....     ...||+|.+....  .....+.+|+.+++.+ +|+|+     +++++++
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----~~~~~~~   85 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI-----INLLGVC   85 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCe-----eeEEEEE
Confidence            36799999999999999999987643     3789999987532  3335677899999998 67766     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhc--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEE
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKN--------------SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL  227 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~--------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli  227 (438)
                      ..++.+++||||+ +++|.+++...              ....+++..+..++.||+.||+|||++||+||||||+||++
T Consensus        86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~  165 (293)
T cd05053          86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV  165 (293)
T ss_pred             cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE
Confidence            9999999999999 99999999752              23468899999999999999999999999999999999999


Q ss_pred             ecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHH
Q 013678          228 VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLW  302 (438)
Q Consensus       228 ~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Diw  302 (438)
                      +.++.                           ++|+|||.+.......     ....++..|+|||++.+..++.++|||
T Consensus       166 ~~~~~---------------------------~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  218 (293)
T cd05053         166 TEDHV---------------------------MKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVW  218 (293)
T ss_pred             cCCCe---------------------------EEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCccccee
Confidence            76664                           5666666655433221     112345679999999888899999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccch
Q 013678          303 SVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP  381 (438)
Q Consensus       303 SlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (438)
                      ||||++|+|++ |..||......+....+....                                               
T Consensus       219 slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-----------------------------------------------  251 (293)
T cd05053         219 SFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGY-----------------------------------------------  251 (293)
T ss_pred             ehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-----------------------------------------------
Confidence            99999999997 999998765544433322110                                               


Q ss_pred             hhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       382 ~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                        ....+...+..+.+|+.+||..||++|||+.|++++
T Consensus       252 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         252 --RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             --cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence              001112345689999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=4.8e-41  Score=320.41  Aligned_cols=288  Identities=21%  Similarity=0.243  Sum_probs=199.5

Q ss_pred             cceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-CCCH
Q 013678          104 TFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSL  179 (438)
Q Consensus       104 ~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L  179 (438)
                      ++|.||++++..+++.||||+++..   ....+.+.+|+.+++.++|+|+     +++++++...+..+++|||+ +++|
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i-----~~~~~~~~~~~~~~~~~e~~~~~~l   86 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNI-----LPYVTSFIVDSELYVVSPLMAYGSC   86 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcch-----hhhhheeecCCeEEEEEeccCCCCH
Confidence            4556677777779999999998753   3345678899999999998887     99999999999999999999 8999


Q ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCC
Q 013678          180 YDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA  259 (438)
Q Consensus       180 ~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~  259 (438)
                      .+++.......+++..++.++.||+.||+|||++||+||||||+||+++.++.++++||+.+......+..        .
T Consensus        87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~--------~  158 (314)
T cd08216          87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR--------Q  158 (314)
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccc--------c
Confidence            99998755457899999999999999999999999999999999999998887777666654322111000        0


Q ss_pred             eEEecCCCCcccCCCCcccccCCCcchhHHHhCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Q 013678          260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL  337 (438)
Q Consensus       260 ~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~  337 (438)
                               ...........++..|+|||++.+.  .++.++|||||||++|+|++|..||.........  +....+..
T Consensus       159 ---------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~--~~~~~~~~  227 (314)
T cd08216         159 ---------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQML--LEKVRGTV  227 (314)
T ss_pred             ---------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHhccC
Confidence                     0000111223567889999999764  5889999999999999999999999876544332  22222222


Q ss_pred             ChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhH-HHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHH
Q 013678          338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM-RAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREA  416 (438)
Q Consensus       338 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~el  416 (438)
                      +..+...               .++......... ...................++.++.+||.+||++||++|||++++
T Consensus       228 ~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~l  292 (314)
T cd08216         228 PCLLDKS---------------TYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQL  292 (314)
T ss_pred             ccccccC---------------chhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHH
Confidence            2111000               000000000000 000000000000111122346789999999999999999999999


Q ss_pred             hcCCCCCCCCCCce
Q 013678          417 LRHPFFTRDVRRPT  430 (438)
Q Consensus       417 l~hp~f~~~~~~~~  430 (438)
                      |+||||+....++.
T Consensus       293 l~~p~~~~~~~~~~  306 (314)
T cd08216         293 LNHSFFKQCKRRNT  306 (314)
T ss_pred             hcCchHhhhcccch
Confidence            99999997765544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=2e-40  Score=314.30  Aligned_cols=248  Identities=23%  Similarity=0.385  Sum_probs=195.5

Q ss_pred             CCceEEEeeeeeecceEEEEEEE-----CCCCcEEEEEEeecch--hhHHHHHHHHHHHHHH-HhcCCCCcceEEeccee
Q 013678           91 TPRCKILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~  162 (438)
                      .++|.+.+.||+|+||.||+|.+     ..++..||+|+++...  ...+.+.+|+.+++++ +|+|+     +++++++
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~~~  108 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENI-----VNLLGAC  108 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCc-----ceEEEEE
Confidence            46899999999999999999975     3345689999987532  3345678899999999 68877     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      ...+..++||||+ +++|.+++.......+++..+..++.||+.||+|||+++|+|+||||+|||++.++.         
T Consensus       109 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~---------  179 (302)
T cd05055         109 TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKI---------  179 (302)
T ss_pred             ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCe---------
Confidence            9999999999999 899999998655445899999999999999999999999999999999999976554         


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE  315 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~  315 (438)
                                        ++|+|||.+.......     ....++..|+|||.+.+..++.++|||||||++|+|++ |.
T Consensus       180 ------------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~  241 (302)
T cd05055         180 ------------------VKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGS  241 (302)
T ss_pred             ------------------EEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCC
Confidence                              5555666554332211     11245678999999998889999999999999999998 99


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      .||............... + .                                              ........+.++
T Consensus       242 ~p~~~~~~~~~~~~~~~~-~-~----------------------------------------------~~~~~~~~~~~~  273 (302)
T cd05055         242 NPYPGMPVDSKFYKLIKE-G-Y----------------------------------------------RMAQPEHAPAEI  273 (302)
T ss_pred             CCcCCCCchHHHHHHHHc-C-C----------------------------------------------cCCCCCCCCHHH
Confidence            999765543332221110 0 0                                              000112345689


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q 013678          396 IDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      .+|+.+||..||++|||+.|+++
T Consensus       274 ~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         274 YDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             HHHHHHHcCCCchhCcCHHHHHH
Confidence            99999999999999999999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-41  Score=322.54  Aligned_cols=209  Identities=25%  Similarity=0.343  Sum_probs=176.7

Q ss_pred             CceeeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhh-HHHHHHHHHHHHHHHhcCCCCcceEEe
Q 013678           80 GHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-REAAMIEIDVLQRLARHDIGGTRCVQI  158 (438)
Q Consensus        80 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~i~~~~iv~~  158 (438)
                      ..|.+..-...+++|.-.+.||+|+||.||+|.... +..||||.+...... ..++.+|+.++.+++|+|+     |++
T Consensus        63 ~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nl-----v~L  136 (361)
T KOG1187|consen   63 RSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNL-----VKL  136 (361)
T ss_pred             ceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCc-----ccE
Confidence            345555555677889999999999999999998654 488999988765543 5669999999999999988     999


Q ss_pred             cceeccCC-eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCCCCcEEEecCccc
Q 013678          159 RNWFDYRN-HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR---LIHTDLKPENILLVSAEYV  233 (438)
Q Consensus       159 ~~~~~~~~-~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIli~~~~~~  233 (438)
                      +|||.+.+ +.+||+||+ +|+|.++|.......++|....+|+.++++||+|||+..   |||||||++|||++.+.  
T Consensus       137 lGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~--  214 (361)
T KOG1187|consen  137 LGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDF--  214 (361)
T ss_pred             EEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCC--
Confidence            99999888 599999999 999999998765337899999999999999999999854   99999999999996544  


Q ss_pred             ccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC-CCcc--c-ccCCCcchhHHHhCCCCCcchhHHHHHHHHH
Q 013678          234 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-DHSY--V-VSTRHYRAPEVILGLGWNYPCDLWSVGCILV  309 (438)
Q Consensus       234 kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~--~-~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  309 (438)
                                               .+||+|||+|..... ....  . .||..|+|||.+..+..+.++|||||||+|.
T Consensus       215 -------------------------~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvll  269 (361)
T KOG1187|consen  215 -------------------------NAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLL  269 (361)
T ss_pred             -------------------------CEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHH
Confidence                                     677777777765543 2222  2 7999999999999988999999999999999


Q ss_pred             HHHhCCCCCCCC
Q 013678          310 ELCSGEALFQTH  321 (438)
Q Consensus       310 elltg~~pf~~~  321 (438)
                      ||++|+.+....
T Consensus       270 Elitgr~~~d~~  281 (361)
T KOG1187|consen  270 ELITGRKAVDQS  281 (361)
T ss_pred             HHHhCCcccCCC
Confidence            999999887643

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.5e-40  Score=311.17  Aligned_cols=247  Identities=21%  Similarity=0.343  Sum_probs=196.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCC-----CcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      .++|++.+.||+|+||.||+|.+...     +..||+|.+....  .....+.+|+.+++.+.|+++     +++++++.
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~   79 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHV-----VRLLGVVS   79 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCce-----eEEEEEEc
Confidence            46899999999999999999987643     4789999986432  334567789999999988877     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNS--------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  234 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  234 (438)
                      .....++||||+ +++|.+++....        ...+++..+..++.||+.||.|||++||+||||||+||+++.++.  
T Consensus        80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~--  157 (277)
T cd05032          80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLT--  157 (277)
T ss_pred             CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCC--
Confidence            999999999999 899999997532        124788899999999999999999999999999999999977664  


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHH
Q 013678          235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  309 (438)
Q Consensus       235 l~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  309 (438)
                                               ++|+|||++......     .....++..|+|||.+.+..++.++|||||||++|
T Consensus       158 -------------------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  212 (277)
T cd05032         158 -------------------------VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLW  212 (277)
T ss_pred             -------------------------EEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHH
Confidence                                     555566555432211     12235677899999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhcc
Q 013678          310 ELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  388 (438)
Q Consensus       310 ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (438)
                      ++++ |..||.+.+..+....+..  +..                                               ...+
T Consensus       213 el~t~g~~p~~~~~~~~~~~~~~~--~~~-----------------------------------------------~~~~  243 (277)
T cd05032         213 EMATLAEQPYQGLSNEEVLKFVID--GGH-----------------------------------------------LDLP  243 (277)
T ss_pred             HhhccCCCCCccCCHHHHHHHHhc--CCC-----------------------------------------------CCCC
Confidence            9998 9999987665544333321  000                                               0112


Q ss_pred             CCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          389 DHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       389 ~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ...+.++.+||.+||+.||++|||+.++++
T Consensus       244 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         244 ENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            234668999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=1.2e-40  Score=316.69  Aligned_cols=254  Identities=26%  Similarity=0.363  Sum_probs=202.6

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ...+|...+.||+|+||.||+|++..+++.||+|.+...    ......+.+|+.+++.++|+++     +++++++...
T Consensus        13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~   87 (308)
T cd06634          13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT-----IQYRGCYLRE   87 (308)
T ss_pred             cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCc-----ccEEEEEEcC
Confidence            345688899999999999999999999999999998632    2233567789999999988887     9999999999


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ...++||||+.++|.+++.... ..+++..+..++.|++.||.|||+++++||||||+||+++.++              
T Consensus        88 ~~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~--------------  152 (308)
T cd06634          88 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--------------  152 (308)
T ss_pred             CeeEEEEEccCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCC--------------
Confidence            9999999999778888876543 4689999999999999999999999999999999999997655              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                   .++|+|||.+...... ....|+..|+|||.+.+   ..++.++|||||||++|+|++|..||...+
T Consensus       153 -------------~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~  218 (308)
T cd06634         153 -------------LVKLGDFGSASIMAPA-NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  218 (308)
T ss_pred             -------------cEEECCcccceeecCc-ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc
Confidence                         4666666665543322 23468889999999853   457889999999999999999999997654


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ..+....+....  .|.                                              ......+..+.+||.+|
T Consensus       219 ~~~~~~~~~~~~--~~~----------------------------------------------~~~~~~~~~~~~li~~c  250 (308)
T cd06634         219 AMSALYHIAQNE--SPA----------------------------------------------LQSGHWSEYFRNFVDSC  250 (308)
T ss_pred             HHHHHHHHhhcC--CCC----------------------------------------------cCcccccHHHHHHHHHH
Confidence            443333222110  000                                              00123456789999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      |+.+|++||++.++++|||+...
T Consensus       251 l~~~P~~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         251 LQKIPQDRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             hhCCcccCCCHHHHhhCcccccc
Confidence            99999999999999999999885

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=7.6e-41  Score=310.12  Aligned_cols=243  Identities=28%  Similarity=0.426  Sum_probs=190.9

Q ss_pred             EEEeeeeeecceEEEEEEEC----CCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           95 KILSKMGEGTFGQVVECFDN----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ++.+.||.|.||.||+|...    ..+..|+||+++..  ....+.+.+|+.++.+++|+||     +++++++...+..
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----~~~~g~~~~~~~~   76 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNI-----VKLYGFCIENEPL   76 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTB-----E-EEEEEESSSSE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccc-----ccccccccccccc
Confidence            57789999999999999887    45678999999642  2346788999999999999888     9999999988889


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      ++||||+ +++|.+++.......+++..+..++.||+.||.|||+++|+|+||+++||+++.++.               
T Consensus        77 ~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~---------------  141 (259)
T PF07714_consen   77 FLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQ---------------  141 (259)
T ss_dssp             EEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTE---------------
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---------------
Confidence            9999999 899999999874457999999999999999999999999999999999999987765               


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTH  321 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~  321 (438)
                                  +||+|||++......     .....+...|+|||.+.+..++.++||||||+++||+++ |+.||...
T Consensus       142 ------------~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~  209 (259)
T PF07714_consen  142 ------------VKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY  209 (259)
T ss_dssp             ------------EEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS
T ss_pred             ------------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                        555555555443111     111245678999999999889999999999999999999 78999887


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +..+....+.+..                                                 .......++..+.++|.+
T Consensus       210 ~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~~li~~  240 (259)
T PF07714_consen  210 DNEEIIEKLKQGQ-------------------------------------------------RLPIPDNCPKDIYSLIQQ  240 (259)
T ss_dssp             CHHHHHHHHHTTE-------------------------------------------------ETTSBTTSBHHHHHHHHH
T ss_pred             ccccccccccccc-------------------------------------------------cceeccchhHHHHHHHHH
Confidence            6666554442210                                                 011223457789999999


Q ss_pred             ccccCCCCCCCHHHHhc
Q 013678          402 LLRYDPAERLKAREALR  418 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~  418 (438)
                      ||..||++|||++++++
T Consensus       241 C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  241 CWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             HT-SSGGGS--HHHHHH
T ss_pred             HcCCChhhCcCHHHHHh
Confidence            99999999999999975

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.7e-40  Score=307.50  Aligned_cols=241  Identities=22%  Similarity=0.363  Sum_probs=197.2

Q ss_pred             eeeeeecceEEEEEEECCC---CcEEEEEEeecchhh--HHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEK---KELVAIKIVRSINKY--REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +.||+|+||.||+|.+...   +..||+|++......  .+.+.+|+.++..++|+++     +++++++.....+++||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~lv~   75 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNV-----VRLLGVCTEEEPLYLVL   75 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCCh-----heeeeeecCCCceEEEE
Confidence            4689999999999999866   889999999764432  5778899999999988877     99999999999999999


Q ss_pred             ccC-CCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          173 EKL-GPSLYDFLRKNS-------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      ||+ +++|.+++....       ...+++..+..++.||+.||+|||++||+||||||+||+++.++             
T Consensus        76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~-------------  142 (262)
T cd00192          76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDL-------------  142 (262)
T ss_pred             EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCC-------------
Confidence            999 999999998751       24799999999999999999999999999999999999997765             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALF  318 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf  318 (438)
                                    .++|+|||.+......     .....++..|+|||.+.+..++.++|||||||++|+|++ |..||
T Consensus       143 --------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~  208 (262)
T cd00192         143 --------------VVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPY  208 (262)
T ss_pred             --------------cEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCC
Confidence                          4566666665544322     223457889999999998889999999999999999999 69999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      ......+....+...  .                                               ....+..++.++.++
T Consensus       209 ~~~~~~~~~~~~~~~--~-----------------------------------------------~~~~~~~~~~~~~~l  239 (262)
T cd00192         209 PGLSNEEVLEYLRKG--Y-----------------------------------------------RLPKPEYCPDELYEL  239 (262)
T ss_pred             CCCCHHHHHHHHHcC--C-----------------------------------------------CCCCCccCChHHHHH
Confidence            887655544433220  0                                               001123446789999


Q ss_pred             HHHccccCCCCCCCHHHHhcC
Q 013678          399 LQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~h  419 (438)
                      +.+||..||++|||+.|++++
T Consensus       240 i~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         240 MLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             HHHHccCCcccCcCHHHHHHh
Confidence            999999999999999999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=1.9e-40  Score=315.39  Aligned_cols=248  Identities=19%  Similarity=0.311  Sum_probs=193.8

Q ss_pred             CCceEEEeeeeeecceEEEEEEECC-------CCcEEEEEEeecc--hhhHHHHHHHHHHHHHH-HhcCCCCcceEEecc
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRN  160 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~  160 (438)
                      .++|.+.+.||+|+||.||+|++..       +...||+|+++..  ......+.+|+.+++.+ .|+++     +++++
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i-----~~~~~   91 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNI-----INLLG   91 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCE-----eeEEE
Confidence            4689999999999999999998643       2356999998753  23345677899999998 57766     99999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSY--------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  225 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  225 (438)
                      ++...+..|+||||+ +++|.+++.....              ..+++..+..++.||+.||+|||++|++||||||+||
T Consensus        92 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni  171 (307)
T cd05098          92 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNV  171 (307)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHhe
Confidence            999999999999999 8999999976421              2488899999999999999999999999999999999


Q ss_pred             EEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchh
Q 013678          226 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCD  300 (438)
Q Consensus       226 li~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D  300 (438)
                      +++.++.                           ++|+|||.+.......     ....++..|+|||++.+..++.++|
T Consensus       172 ll~~~~~---------------------------~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  224 (307)
T cd05098         172 LVTEDNV---------------------------MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD  224 (307)
T ss_pred             EEcCCCc---------------------------EEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHH
Confidence            9976654                           5666666554332211     1113356899999999888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhcc
Q 013678          301 LWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR  379 (438)
Q Consensus       301 iwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (438)
                      ||||||++|+|++ |..||.+....+....+....                                             
T Consensus       225 vwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---------------------------------------------  259 (307)
T cd05098         225 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH---------------------------------------------  259 (307)
T ss_pred             HHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCC---------------------------------------------
Confidence            9999999999998 889997655443333221100                                             


Q ss_pred             chhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       380 ~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                          ....+...+.++.+||.+||..+|++|||+.+++++
T Consensus       260 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         260 ----RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             ----CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence                001122446789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=4.3e-41  Score=311.61  Aligned_cols=245  Identities=23%  Similarity=0.316  Sum_probs=194.1

Q ss_pred             eeeeeecceEEEEEEECCCCc-------EEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKE-------LVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~-------~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +.||+|+||.||+|.+..++.       .||+|.+.... ...+.+..|+.+++.+.|+|+     +++++++..+...+
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----v~~~~~~~~~~~~~   75 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHL-----VLNYGVCVCGDESI   75 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCCh-----hheeeEEEeCCCcE
Confidence            468999999999998866544       38888876433 334567789999999888877     99999999989999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+||+++.++..++.+++         
T Consensus        76 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~---------  145 (258)
T cd05078          76 MVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPP---------  145 (258)
T ss_pred             EEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCc---------
Confidence            999999 999999998654 368999999999999999999999999999999999999988876665554         


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCC-CCCCCCChHHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGE-ALFQTHENLEH  326 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~-~pf~~~~~~~~  326 (438)
                                .++++|||.+..... .....++..|+|||++.+. .++.++|||||||++|+|++|. .||...+....
T Consensus       146 ----------~~~l~d~g~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~  214 (258)
T cd05078         146 ----------FIKLSDPGISITVLP-KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK  214 (258)
T ss_pred             ----------eEEecccccccccCC-chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH
Confidence                      379999998865443 2335788899999999874 5789999999999999999984 66654433322


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      ...... ..                                                  ..+...+.++.+||.+||+.|
T Consensus       215 ~~~~~~-~~--------------------------------------------------~~~~~~~~~~~~li~~~l~~~  243 (258)
T cd05078         215 LQFYED-RH--------------------------------------------------QLPAPKWTELANLINQCMDYE  243 (258)
T ss_pred             HHHHHc-cc--------------------------------------------------cCCCCCcHHHHHHHHHHhccC
Confidence            211100 00                                                  011223457899999999999


Q ss_pred             CCCCCCHHHHhcC
Q 013678          407 PAERLKAREALRH  419 (438)
Q Consensus       407 P~~Rpta~ell~h  419 (438)
                      |++|||++++++.
T Consensus       244 p~~Rps~~~il~~  256 (258)
T cd05078         244 PDFRPSFRAIIRD  256 (258)
T ss_pred             hhhCCCHHHHHHh
Confidence            9999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=3.1e-40  Score=306.18  Aligned_cols=246  Identities=25%  Similarity=0.374  Sum_probs=196.8

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ..++|++.++||+|+||.||++.+. .+..+|+|.+.......+.+.+|+.+++.++|+++     +++++.+.+ ...+
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~-~~~~   76 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKL-----VKLHAVVTK-EPIY   76 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCc-----ceEEEEEcC-CCeE
Confidence            4578999999999999999999865 44569999987655556778899999999998887     999998887 7789


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++.......+++..+..++.||+.||.|||+.|++|+||||+||+++.++.                
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~----------------  140 (260)
T cd05073          77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLV----------------  140 (260)
T ss_pred             EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCc----------------
Confidence            999999 899999998765567889999999999999999999999999999999999976664                


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCh
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN  323 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~  323 (438)
                                 ++|+|||.+.......    ....++..|+|||++.+..++.++|||||||++|++++ |..||.+.+.
T Consensus       141 -----------~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~  209 (260)
T cd05073         141 -----------CKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN  209 (260)
T ss_pred             -----------EEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH
Confidence                       5555555554322111    11244567999999988889999999999999999998 9999987665


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .+....+.....                                                 .......+.++.+++.+||
T Consensus       210 ~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~~i~~~l  240 (260)
T cd05073         210 PEVIRALERGYR-------------------------------------------------MPRPENCPEELYNIMMRCW  240 (260)
T ss_pred             HHHHHHHhCCCC-------------------------------------------------CCCcccCCHHHHHHHHHHc
Confidence            444433321100                                                 0111344668999999999


Q ss_pred             ccCCCCCCCHHHHhc
Q 013678          404 RYDPAERLKAREALR  418 (438)
Q Consensus       404 ~~dP~~Rpta~ell~  418 (438)
                      +.||++||++.++++
T Consensus       241 ~~~p~~Rp~~~~l~~  255 (260)
T cd05073         241 KNRPEERPTFEYIQS  255 (260)
T ss_pred             ccCcccCcCHHHHHH
Confidence            999999999998864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=3.9e-40  Score=304.41  Aligned_cols=249  Identities=28%  Similarity=0.447  Sum_probs=203.5

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +|++.++||+|+||.||++.+..+++.+|+|.+....   .....+.+|+.+++.++|+++     +++++++.+....+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   75 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNI-----ISYKEAFLDGNKLC   75 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCc-----hhhhhhhccCCEEE
Confidence            5899999999999999999999999999999987532   334566789999999988877     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          170 IVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||+ +++|.+++...  ....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++               
T Consensus        76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~---------------  140 (256)
T cd08530          76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAND---------------  140 (256)
T ss_pred             EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCC---------------
Confidence            999999 99999998762  124689999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                  .++|+|||++...... .....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+...
T Consensus       141 ------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~  208 (256)
T cd08530         141 ------------LVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD  208 (256)
T ss_pred             ------------cEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                        4677777766554332 122467889999999998889999999999999999999999998766544


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+...  ..+                                               ......+.++.++|.+||..
T Consensus       209 ~~~~~~~~--~~~-----------------------------------------------~~~~~~~~~~~~li~~~l~~  239 (256)
T cd08530         209 LRYKVQRG--KYP-----------------------------------------------PIPPIYSQDLQNFIRSMLQV  239 (256)
T ss_pred             HHHHHhcC--CCC-----------------------------------------------CCchhhCHHHHHHHHHHcCC
Confidence            33222110  000                                               01123456899999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 013678          406 DPAERLKAREALRHPFF  422 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f  422 (438)
                      ||++|||+.++++||++
T Consensus       240 ~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         240 KPKLRPNCDKILASPAV  256 (256)
T ss_pred             CcccCCCHHHHhcCCCC
Confidence            99999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=2.4e-40  Score=312.19  Aligned_cols=246  Identities=22%  Similarity=0.348  Sum_probs=195.4

Q ss_pred             CceEEEeeeeeecceEEEEEEEC-----CCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+|.+.+.||+|+||.||+|.+.     .++..+++|.+.... ...+.+.+|+.+++.++|+|+     +++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~   79 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI-----VKFYGVCGDG   79 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCc-----ceEEEEEccC
Confidence            46899999999999999999853     345679999886433 334568899999999988887     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  230 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~  230 (438)
                      +..++||||+ +++|.+++....              ...+++..++.++.||+.||+|||++||+||||||+||+++.+
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~  159 (291)
T cd05094          80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN  159 (291)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence            9999999999 999999997643              1348899999999999999999999999999999999999776


Q ss_pred             cccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHHH
Q 013678          231 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVG  305 (438)
Q Consensus       231 ~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  305 (438)
                      +.                           ++|+|||++......     .....++..|+|||.+.+..++.++||||||
T Consensus       160 ~~---------------------------~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  212 (291)
T cd05094         160 LL---------------------------VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG  212 (291)
T ss_pred             Cc---------------------------EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHH
Confidence            64                           555555555432221     1223567889999999998899999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhh
Q 013678          306 CILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  384 (438)
Q Consensus       306 ~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (438)
                      |++|+|++ |..||...+..+....+...  ..+                                              
T Consensus       213 ~il~el~t~g~~p~~~~~~~~~~~~~~~~--~~~----------------------------------------------  244 (291)
T cd05094         213 VILWEIFTYGKQPWFQLSNTEVIECITQG--RVL----------------------------------------------  244 (291)
T ss_pred             HHHHHHHhCCCCCCCCCCHHHHHHHHhCC--CCC----------------------------------------------
Confidence            99999999 99999776655443332110  000                                              


Q ss_pred             hhccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       385 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                       ......+..+.+++.+||+.||++|||+.++++
T Consensus       245 -~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         245 -ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             -CCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence             011234568999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-40  Score=305.75  Aligned_cols=239  Identities=31%  Similarity=0.532  Sum_probs=199.0

Q ss_pred             eeeecceEEEEEEECCCCcEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678          100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      ||.|+||.||++.+..+++.||+|++.....    ....+..|+.+++.+.|+++     +++++.++.++.+|+||||+
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~~v~e~~   75 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFI-----VKLHYAFQTEEKLYLVLEYA   75 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcH-----HHHHHHeecCCeeEEEEecC
Confidence            6999999999999988899999999875332    34577889999999998877     99999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCC
Q 013678          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  254 (438)
Q Consensus       176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~  254 (438)
                       +++|.+++....  .+++..+..++.|++.||.|||+++++|+||||+||+++.++                       
T Consensus        76 ~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~-----------------------  130 (250)
T cd05123          76 PGGELFSHLSKEG--RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADG-----------------------  130 (250)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCC-----------------------
Confidence             999999998764  689999999999999999999999999999999999997655                       


Q ss_pred             CCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 013678          255 PKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  331 (438)
Q Consensus       255 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~  331 (438)
                          .++|+|||.+......   .....++..|+|||.+.+...+.++|+||||+++|++++|..||...+.......+.
T Consensus       131 ----~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~  206 (250)
T cd05123         131 ----HIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKIL  206 (250)
T ss_pred             ----cEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence                5677777776654332   233567889999999988888999999999999999999999997765533333322


Q ss_pred             HHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCC
Q 013678          332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  411 (438)
Q Consensus       332 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  411 (438)
                      ...                                                  .......+..+.++|++||..||++||
T Consensus       207 ~~~--------------------------------------------------~~~~~~~~~~l~~~i~~~l~~~p~~R~  236 (250)
T cd05123         207 KDP--------------------------------------------------LRFPEFLSPEARDLISGLLQKDPTKRL  236 (250)
T ss_pred             cCC--------------------------------------------------CCCCCCCCHHHHHHHHHHhcCCHhhCC
Confidence            100                                                  011123356889999999999999999


Q ss_pred             CH---HHHhcCCCC
Q 013678          412 KA---REALRHPFF  422 (438)
Q Consensus       412 ta---~ell~hp~f  422 (438)
                      |+   +++++||||
T Consensus       237 ~~~~~~~l~~~~~f  250 (250)
T cd05123         237 GSGGAEEIKAHPFF  250 (250)
T ss_pred             CcccHHHHHhCCCC
Confidence            99   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=2e-40  Score=308.63  Aligned_cols=247  Identities=27%  Similarity=0.411  Sum_probs=195.7

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++.+.||+|+||.||+|++..+++.||||.+...    ......+.+|+.+++.+.|+|+     +++++++..++.
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~   76 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNV-----IKYYASFIEDNE   76 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCch-----hhhhheeEeCCe
Confidence            4688999999999999999999999999999987642    2234567889999999988887     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          168 ICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      .++||||+ +++|.+++...  ....+++..++.++.||+.||.|||++||+|+||||+||+++.++.            
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~------------  144 (267)
T cd08229          77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGV------------  144 (267)
T ss_pred             EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCC------------
Confidence            99999999 89999998742  2246899999999999999999999999999999999999976664            


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                     ++|+|||++.......   ....|+..|+|||.+.+..++.++||||||+++|+|++|..||.+.
T Consensus       145 ---------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  209 (267)
T cd08229         145 ---------------VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             ---------------EEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccc
Confidence                           5666666554432221   2246888999999999888999999999999999999999999654


Q ss_pred             ChH--HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          322 ENL--EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       322 ~~~--~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      ...  .....+...                          .++.                      ......+..+.++|
T Consensus       210 ~~~~~~~~~~~~~~--------------------------~~~~----------------------~~~~~~~~~~~~li  241 (267)
T cd08229         210 KMNLYSLCKKIEQC--------------------------DYPP----------------------LPSDHYSEELRQLV  241 (267)
T ss_pred             cchHHHHhhhhhcC--------------------------CCCC----------------------CCcccccHHHHHHH
Confidence            321  111111100                          0000                      00123466899999


Q ss_pred             HHccccCCCCCCCHHHHhc
Q 013678          400 QGLLRYDPAERLKAREALR  418 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~  418 (438)
                      .+||+.||++|||+.+|++
T Consensus       242 ~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         242 NMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             HHhcCCCcccCCCHHHHHH
Confidence            9999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=1.6e-40  Score=308.10  Aligned_cols=248  Identities=30%  Similarity=0.478  Sum_probs=197.8

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc------hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ||.+.++||+|+||.||++.+..++..+++|+++..      ......+.+|+.+++.++|+|+     +++++++.+..
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   75 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAI-----VKFHASFLERD   75 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcH-----HHHHHHHhcCC
Confidence            689999999999999999999888777777776531      1223456678899999988877     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          167 HICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      ..++||||+ +++|.+++...  ....+++..++.++.|++.||.|||++|++|+||||+||+++. +            
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~------------  142 (260)
T cd08222          76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-N------------  142 (260)
T ss_pred             ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-C------------
Confidence            999999999 89999988642  2346899999999999999999999999999999999999953 2            


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                     .++|+|||.+......   .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||..
T Consensus       143 ---------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~  207 (260)
T cd08222         143 ---------------LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEG  207 (260)
T ss_pred             ---------------CEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                           3677777766543222   1234678899999999888889999999999999999999999976


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      .........+..  +..|                                               .....++.++.++|.
T Consensus       208 ~~~~~~~~~~~~--~~~~-----------------------------------------------~~~~~~~~~~~~li~  238 (260)
T cd08222         208 QNFLSVVLRIVE--GPTP-----------------------------------------------SLPETYSRQLNSIMQ  238 (260)
T ss_pred             ccHHHHHHHHHc--CCCC-----------------------------------------------CCcchhcHHHHHHHH
Confidence            544333322211  1111                                               011234568899999


Q ss_pred             HccccCCCCCCCHHHHhcCCCC
Q 013678          401 GLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      +||+.||++||++.|+++||||
T Consensus       239 ~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         239 SMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HHhcCChhhCcCHHHHhhCCCC
Confidence            9999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=2.6e-40  Score=311.74  Aligned_cols=253  Identities=27%  Similarity=0.433  Sum_probs=198.9

Q ss_pred             ceEEEeeeeeecceEEEEEEEC---CCCcEEEEEEeecch-----hhHHHHHHHHHHHHHHH-hcCCCCcceEEecceec
Q 013678           93 RCKILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~  163 (438)
                      +|++.+.||.|+||.||+|.+.   .+|+.||+|+++...     ...+.+.+|+.++..+. |+++     +.+++.++
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i-----~~~~~~~~   75 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL-----VTLHYAFQ   75 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCCh-----hceeeEee
Confidence            4789999999999999999874   478999999987532     23456778999999995 5655     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      .+..+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++|++||||||+|||++.++           
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~-----------  142 (290)
T cd05613          76 TDTKLHLILDYINGGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNG-----------  142 (290)
T ss_pred             cCCeEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCC-----------
Confidence            999999999999 899999998754  689999999999999999999999999999999999997655           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCC--CCCcchhHHHHHHHHHHHHhCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~~  316 (438)
                                      .++|+|||++.......    ....|+..|+|||.+.+.  .++.++|||||||++|+|++|..
T Consensus       143 ----------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~  206 (290)
T cd05613         143 ----------------HVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGAS  206 (290)
T ss_pred             ----------------CEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCC
Confidence                            46666666655432211    124688999999998753  46789999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHH-hCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          317 LFQTHENLEHLAMMERV-LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      ||...........+... ....                                               ...+..++..+
T Consensus       207 p~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~  239 (290)
T cd05613         207 PFTVDGEKNSQAEISRRILKSE-----------------------------------------------PPYPQEMSALA  239 (290)
T ss_pred             CCCcCCccccHHHHHHHhhccC-----------------------------------------------CCCCccCCHHH
Confidence            99653322222212111 0000                                               01122356688


Q ss_pred             HHHHHHccccCCCCCC-----CHHHHhcCCCCCCCC
Q 013678          396 IDLLQGLLRYDPAERL-----KAREALRHPFFTRDV  426 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rp-----ta~ell~hp~f~~~~  426 (438)
                      .+|+.+||+.||++|+     +++++++||||+...
T Consensus       240 ~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         240 KDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             HHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence            9999999999999997     899999999998764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=2.4e-40  Score=312.85  Aligned_cols=253  Identities=22%  Similarity=0.357  Sum_probs=196.6

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCC----------------cEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCc
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKK----------------ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT  153 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~----------------~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~  153 (438)
                      ++|++.+.||+|+||.||+|.+..++                ..||+|.+....  ...+.+.+|+.++..+.|+|+   
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i---   81 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNI---   81 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCE---
Confidence            67899999999999999999876543                568999987532  345678889999999998877   


Q ss_pred             ceEEecceeccCCeEEEEEccC-CCCHHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 013678          154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNS---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPE  223 (438)
Q Consensus       154 ~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~  223 (438)
                        +++++++..++..++||||+ +++|.+++....         ...+++..++.++.|++.||+|||++||+||||||+
T Consensus        82 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~  159 (296)
T cd05051          82 --ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATR  159 (296)
T ss_pred             --eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchh
Confidence              99999999999999999999 899999997643         125899999999999999999999999999999999


Q ss_pred             cEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcc
Q 013678          224 NILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYP  298 (438)
Q Consensus       224 NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~  298 (438)
                      ||+++.++.                           ++|+|||.+......     .....++..|+|||.+.+..++.+
T Consensus       160 Nili~~~~~---------------------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  212 (296)
T cd05051         160 NCLVGKNYT---------------------------IKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTK  212 (296)
T ss_pred             ceeecCCCc---------------------------eEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCcc
Confidence            999977664                           455555554432211     112345778999999998889999


Q ss_pred             hhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHH
Q 013678          299 CDLWSVGCILVELCS--GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK  376 (438)
Q Consensus       299 ~DiwSlG~il~ellt--g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (438)
                      +|||||||++|+|++  |..||...+..+.+..+......                   ..                   
T Consensus       213 ~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~-------------------~~-------------------  254 (296)
T cd05051         213 SDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRD-------------------DG-------------------  254 (296)
T ss_pred             chhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhcccc-------------------cc-------------------
Confidence            999999999999998  77888766555544333221100                   00                   


Q ss_pred             hccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          377 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                          ..........++.++.+|+.+||+.||++|||+.|+++
T Consensus       255 ----~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         255 ----RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             ----ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence                00000112234678999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.6e-41  Score=337.10  Aligned_cols=244  Identities=22%  Similarity=0.359  Sum_probs=203.6

Q ss_pred             CceEEEeeeeeecceEEEEEEECC-----CCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      .+-+..+.||+|.||+||+|+...     ....||||.++...  ..+.+|++|++++..|+|+||     |+++|++..
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nI-----VrLlGVC~~  560 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNI-----VRLLGVCRE  560 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCe-----EEEEEEEcc
Confidence            445778999999999999997532     34679999997543  367899999999999999988     999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcC--------CCC----CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNS--------YRS----FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~--------~~~----l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  231 (438)
                      ++.+|+|+||| .|||.+||+...        +..    ++..+...|+.||+.|++||-++.+|||||-..|+||+++-
T Consensus       561 ~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l  640 (774)
T KOG1026|consen  561 GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENL  640 (774)
T ss_pred             CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccce
Confidence            99999999999 999999998532        122    88899999999999999999999999999999999997665


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCccc-----ccCCCcchhHHHhCCCCCcchhHHHHHH
Q 013678          232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV-----VSTRHYRAPEVILGLGWNYPCDLWSVGC  306 (438)
Q Consensus       232 ~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~-----~gt~~y~aPE~~~~~~~~~~~DiwSlG~  306 (438)
                      .                           |||+|||+++......-+.     .-...|||||.|..++++.+||||||||
T Consensus       641 ~---------------------------VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GV  693 (774)
T KOG1026|consen  641 V---------------------------VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGV  693 (774)
T ss_pred             E---------------------------EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhh
Confidence            4                           5555555554433322222     2256899999999999999999999999


Q ss_pred             HHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhh
Q 013678          307 ILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  385 (438)
Q Consensus       307 il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (438)
                      +|||+++ |..||.+.++.+.++.|.+..                                                 ..
T Consensus       694 vLWEIFsyG~QPy~glSn~EVIe~i~~g~-------------------------------------------------lL  724 (774)
T KOG1026|consen  694 VLWEIFSYGKQPYYGLSNQEVIECIRAGQ-------------------------------------------------LL  724 (774)
T ss_pred             hhhhhhccccCcccccchHHHHHHHHcCC-------------------------------------------------cc
Confidence            9999998 999999999999988876421                                                 12


Q ss_pred             hccCCchhHHHHHHHHccccCCCCCCCHHHH
Q 013678          386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREA  416 (438)
Q Consensus       386 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~el  416 (438)
                      ..+..++.++.+||..||+.+|++||++.||
T Consensus       725 ~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI  755 (774)
T KOG1026|consen  725 SCPENCPTEVYSLMLECWNENPKRRPSFKEI  755 (774)
T ss_pred             cCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence            3345678899999999999999999999987

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-40  Score=313.51  Aligned_cols=253  Identities=21%  Similarity=0.325  Sum_probs=194.6

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCC--------------cEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcce
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKK--------------ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRC  155 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~--------------~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~i  155 (438)
                      .+|++.++||+|+||.||+|.+..++              ..||+|+++..  ......+.+|+++++.++|+++     
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-----   79 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNI-----   79 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCc-----
Confidence            58999999999999999999875432              35899998653  2344568899999999998887     


Q ss_pred             EEecceeccCCeEEEEEccC-CCCHHHHHHhcCC----------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCc
Q 013678          156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSY----------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN  224 (438)
Q Consensus       156 v~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  224 (438)
                      +++++++...+..++||||+ +++|.+++.....          ..+++..+..++.|++.||+|||++|++||||||+|
T Consensus        80 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~N  159 (295)
T cd05097          80 IRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRN  159 (295)
T ss_pred             CeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhh
Confidence            99999999999999999999 9999999865321          236888999999999999999999999999999999


Q ss_pred             EEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcch
Q 013678          225 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPC  299 (438)
Q Consensus       225 Ili~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~  299 (438)
                      |+++.++.                           +||+|||++.......     ....++..|+|||++.+..++.++
T Consensus       160 ill~~~~~---------------------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  212 (295)
T cd05097         160 CLVGNHYT---------------------------IKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTAS  212 (295)
T ss_pred             EEEcCCCc---------------------------EEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchh
Confidence            99976654                           5555555554322111     112446789999999988899999


Q ss_pred             hHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHh
Q 013678          300 DLWSVGCILVELCS--GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL  377 (438)
Q Consensus       300 DiwSlG~il~ellt--g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (438)
                      |||||||++|+|++  |..||...+..+....+......                   ...                   
T Consensus       213 DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~-------------------~~~-------------------  254 (295)
T cd05097         213 DVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRN-------------------QGR-------------------  254 (295)
T ss_pred             hHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhh-------------------ccc-------------------
Confidence            99999999999998  67888776655544433221100                   000                   


Q ss_pred             ccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       378 ~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                          ..........+..+.+|+.+||+.||++|||+.+|++
T Consensus       255 ----~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         255 ----QIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             ----cccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                0001112234678999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=9.3e-41  Score=313.64  Aligned_cols=247  Identities=19%  Similarity=0.269  Sum_probs=195.4

Q ss_pred             CceEEEeeeeeecceEEEEEEECCC-----CcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      .+|++.++||+|+||.||+|.+..+     ++.||||+++...  ...+.+.+|+.++..++|++|     +++++++..
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~i-----v~~~~~~~~   79 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNI-----VCLLGVVTK   79 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCc-----CeEEEEEcC
Confidence            4578899999999999999987543     5789999987433  234567889999999988877     999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  229 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  229 (438)
                      ....++++||+ +++|.+++....              ...+++..+..++.|++.||+|||++||+||||||+||+++.
T Consensus        80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~  159 (283)
T cd05091          80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD  159 (283)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence            99999999999 899999985321              134788899999999999999999999999999999999976


Q ss_pred             CcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHH
Q 013678          230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSV  304 (438)
Q Consensus       230 ~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  304 (438)
                      ++.                           +||+|||++.......     ....+++.|+|||.+.+..++.++|||||
T Consensus       160 ~~~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl  212 (283)
T cd05091         160 KLN---------------------------VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSY  212 (283)
T ss_pred             CCc---------------------------eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHH
Confidence            554                           5666666554332111     12345678999999998889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhh
Q 013678          305 GCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL  383 (438)
Q Consensus       305 G~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (438)
                      ||++|||++ |..||.+....+....+.....                                                
T Consensus       213 G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~------------------------------------------------  244 (283)
T cd05091         213 GVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQV------------------------------------------------  244 (283)
T ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc------------------------------------------------
Confidence            999999998 8889987766555444332110                                                


Q ss_pred             hhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       384 ~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                       ......++..+.+|+.+||+.||++||++.+|++.
T Consensus       245 -~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         245 -LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             -CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence             01123456789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=3.8e-40  Score=308.90  Aligned_cols=244  Identities=22%  Similarity=0.287  Sum_probs=191.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCc----EEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+|+++++||+|+||+||+|.+..+++    .||+|+++..  ......+.+|+.++..+.|+|+     +++++++.. 
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~-   80 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV-----CRLLGICLT-   80 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCC-----ceEEEEEcC-
Confidence            678999999999999999999877765    4899998642  2345667889999998888877     899988865 


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      ...+++|||+ +|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++             
T Consensus        81 ~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~-------------  146 (279)
T cd05109          81 STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPN-------------  146 (279)
T ss_pred             CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC-------------
Confidence            4578999999 999999997643 3689999999999999999999999999999999999997655             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCCc-----ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALF  318 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf  318 (438)
                                    .+||+|||++........     ...++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus       147 --------------~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~  212 (279)
T cd05109         147 --------------HVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPY  212 (279)
T ss_pred             --------------cEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCC
Confidence                          456666666654332211     1234668999999998889999999999999999998 99999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      ...........+... ...                                                ......+.++.++
T Consensus       213 ~~~~~~~~~~~~~~~-~~~------------------------------------------------~~~~~~~~~~~~l  243 (279)
T cd05109         213 DGIPAREIPDLLEKG-ERL------------------------------------------------PQPPICTIDVYMI  243 (279)
T ss_pred             CCCCHHHHHHHHHCC-CcC------------------------------------------------CCCccCCHHHHHH
Confidence            765544333222110 000                                                0112346688999


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q 013678          399 LQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~  418 (438)
                      +.+||..||++|||+.++++
T Consensus       244 i~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         244 MVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             HHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999984

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-42  Score=299.80  Aligned_cols=280  Identities=28%  Similarity=0.447  Sum_probs=222.4

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC-----eE
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN-----HI  168 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~-----~~  168 (438)
                      .+.||.|+||.||.+.|..+|+.||+|++..   +-...+.+.+|++.|..++|.|+     +..+++.+-.+     .+
T Consensus        58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNV-----LSaLDILQPph~dfFqEi  132 (449)
T KOG0664|consen   58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNV-----LSLLDILQPANPSFFQEL  132 (449)
T ss_pred             CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccH-----HHHHHhcCCCCchHHHHH
Confidence            4679999999999999999999999999864   22345778899999999999887     77777665432     57


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      |+|+|++..+|...|-.-.  .++.+.++-+++||++||+|||+.||.||||||.|.|++++                  
T Consensus       133 YV~TELmQSDLHKIIVSPQ--~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSN------------------  192 (449)
T KOG0664|consen  133 YVLTELMQSDLHKIIVSPQ--ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSN------------------  192 (449)
T ss_pred             HHHHHHHHhhhhheeccCC--CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccC------------------
Confidence            8999999999999887654  79999999999999999999999999999999999999654                  


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                               ..+||||||+++..+...    +..+-|.+|+|||++.|.. |+.+.||||.|||+.||+..+..|+..+.
T Consensus       193 ---------CvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P  263 (449)
T KOG0664|consen  193 ---------CILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP  263 (449)
T ss_pred             ---------ceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh
Confidence                     467888888887655433    2346789999999999875 99999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhh-hhhccCCchhHHHHHHHHc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL-IMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ll~~~  402 (438)
                      .+++..|..++|.+..+-+....+-.+.-..+++.. -|+                ...+ ..........+..+++.+|
T Consensus       264 iqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k-~Ps----------------~~vLYtlsS~~~~~heav~~~~~~  326 (449)
T KOG0664|consen  264 IEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLR-APD----------------TQRLYKIASPDDKNHEAVDLLQKL  326 (449)
T ss_pred             HHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCC-CCC----------------ccceeeecCCcccchHHHHHHHHH
Confidence            999999999999998776655544333332222111 010                0000 0111122334678999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      |.+||++|.+..+++.|+++.+..-
T Consensus       327 l~~d~dkris~~~A~~~~~~~e~R~  351 (449)
T KOG0664|consen  327 LHFDPDKRISVEEALQHRYLEEGRL  351 (449)
T ss_pred             hCCCCcccccHhhhcccccccccce
Confidence            9999999999999999999977543

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=3.3e-40  Score=305.49  Aligned_cols=236  Identities=25%  Similarity=0.353  Sum_probs=187.1

Q ss_pred             eeeeecceEEEEEEE--CCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEc
Q 013678           99 KMGEGTFGQVVECFD--NEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (438)
Q Consensus        99 ~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e  173 (438)
                      +||+|+||.||+|.+  ..++..||+|+++...   ...+.+.+|+.++..+.|+|+     +++++++.. +..++|||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~-~~~~lv~e   75 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYI-----VRMIGICEA-ESWMLVME   75 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEcC-CCcEEEEe
Confidence            689999999999964  4577899999986432   345678889999999988887     999988754 56799999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCccc
Q 013678          174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  252 (438)
Q Consensus       174 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~  252 (438)
                      |+ +++|.+++....  .+++..+..++.|++.||+|||++||+||||||+||+++.++                     
T Consensus        76 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~---------------------  132 (257)
T cd05116          76 LAELGPLNKFLQKNK--HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQH---------------------  132 (257)
T ss_pred             cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCC---------------------
Confidence            99 899999997654  689999999999999999999999999999999999997655                     


Q ss_pred             CCCCCCCeEEecCCCCcccCCCCc------ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 013678          253 NLPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  325 (438)
Q Consensus       253 ~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~  325 (438)
                            .++|+|||.+........      ...++..|+|||.+....++.++|||||||++|||++ |..||...+..+
T Consensus       133 ------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  206 (257)
T cd05116         133 ------YAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE  206 (257)
T ss_pred             ------eEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                  456666666554332211      1234578999999988889999999999999999998 999998766555


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+.+..                       .                          ...+...+.++.+||.+||+.
T Consensus       207 ~~~~i~~~~-----------------------~--------------------------~~~~~~~~~~l~~li~~~~~~  237 (257)
T cd05116         207 VTQMIESGE-----------------------R--------------------------MECPQRCPPEMYDLMKLCWTY  237 (257)
T ss_pred             HHHHHHCCC-----------------------C--------------------------CCCCCCCCHHHHHHHHHHhcc
Confidence            444432210                       0                          011224567899999999999


Q ss_pred             CCCCCCCHHHHhc
Q 013678          406 DPAERLKAREALR  418 (438)
Q Consensus       406 dP~~Rpta~ell~  418 (438)
                      ||++||++.+|..
T Consensus       238 ~p~~Rp~~~~i~~  250 (257)
T cd05116         238 GVDERPGFAVVEL  250 (257)
T ss_pred             CchhCcCHHHHHH
Confidence            9999999998864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=4.4e-40  Score=311.15  Aligned_cols=257  Identities=26%  Similarity=0.405  Sum_probs=198.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHH-hcCCCCcceEEecceeccCCeE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      +.|++.+.||+|+||.||+|.+..+++.||||.++...  .....+.+|+.++..+. |+++     +++++++......
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i-----~~~~~~~~~~~~~   89 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYI-----VKCYGYFITDSDV   89 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCch-----HhhheeeecCCeE
Confidence            67899999999999999999999889999999987532  23345566777666554 5555     9999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |+||||++++|.+++.... ..+++..+..++.||+.||+|||+ .||+||||+|+||+++.++                
T Consensus        90 ~~v~e~~~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~----------------  152 (296)
T cd06618          90 FICMELMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASG----------------  152 (296)
T ss_pred             EEEeeccCcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCC----------------
Confidence            9999999888888876643 378999999999999999999997 6999999999999997655                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCC----CCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                 .++|+|||.+.......  ....++..|+|||.+.+..    ++.++|||||||++|+|++|+.||...
T Consensus       153 -----------~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  221 (296)
T cd06618         153 -----------NVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNC  221 (296)
T ss_pred             -----------CEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcc
Confidence                       46666666665432211  2235778899999987653    788999999999999999999999653


Q ss_pred             ChH-HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          322 ENL-EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       322 ~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      ... +.+.   .......                    ..+                        .....++.++.+||.
T Consensus       222 ~~~~~~~~---~~~~~~~--------------------~~~------------------------~~~~~~~~~l~~li~  254 (296)
T cd06618         222 KTEFEVLT---KILQEEP--------------------PSL------------------------PPNEGFSPDFCSFVD  254 (296)
T ss_pred             hhHHHHHH---HHhcCCC--------------------CCC------------------------CCCCCCCHHHHHHHH
Confidence            221 1111   1111000                    000                        001134668999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          401 GLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      +||..||++|||++++++||||....+.
T Consensus       255 ~~l~~~p~~Rp~~~~il~~~~~~~~~~~  282 (296)
T cd06618         255 LCLTKDHRKRPKYRELLQHPFIRRYETA  282 (296)
T ss_pred             HHccCChhhCCCHHHHhcChhhhccchh
Confidence            9999999999999999999999976544

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=6.1e-40  Score=312.84  Aligned_cols=247  Identities=20%  Similarity=0.324  Sum_probs=193.8

Q ss_pred             CCceEEEeeeeeecceEEEEEEEC-------CCCcEEEEEEeecch--hhHHHHHHHHHHHHHH-HhcCCCCcceEEecc
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDN-------EKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRN  160 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~  160 (438)
                      .++|.+.++||+|+||.||+|++.       .....||+|.++...  .....+.+|+.+++.+ .|+|+     +++++
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~   85 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNI-----INLLG   85 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCe-----eeEEE
Confidence            368999999999999999999763       234579999987432  3345677899999988 47766     99999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  225 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  225 (438)
                      ++..++.+|+||||+ +++|.+++....              ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus        86 ~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni  165 (314)
T cd05099          86 VCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNV  165 (314)
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeE
Confidence            999999999999999 999999997642              13588999999999999999999999999999999999


Q ss_pred             EEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchh
Q 013678          226 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCD  300 (438)
Q Consensus       226 li~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D  300 (438)
                      |++.++                           .+||+|||.++......     ....++..|+|||++.+..++.++|
T Consensus       166 ll~~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  218 (314)
T cd05099         166 LVTEDN---------------------------VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSD  218 (314)
T ss_pred             EEcCCC---------------------------cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccch
Confidence            997655                           46666666665433211     1112346799999999888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhcc
Q 013678          301 LWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR  379 (438)
Q Consensus       301 iwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (438)
                      ||||||++|+|++ |..||.+....+....+....                                             
T Consensus       219 iwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---------------------------------------------  253 (314)
T cd05099         219 VWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGH---------------------------------------------  253 (314)
T ss_pred             hhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---------------------------------------------
Confidence            9999999999999 899997765544443332100                                             


Q ss_pred             chhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       380 ~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                          .......++.++.+|+.+||..||++|||+.|+++
T Consensus       254 ----~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         254 ----RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             ----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                00112344668999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=9.9e-40  Score=303.77  Aligned_cols=247  Identities=28%  Similarity=0.427  Sum_probs=196.0

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.++..    ....+.+.+|+.++++++|+++     +++++++...+.
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i-----~~~~~~~~~~~~   76 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNV-----IKYLASFIENNE   76 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCe-----eeeeeeeecCCe
Confidence            5799999999999999999999989999999988632    2335678899999999988877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          168 ICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      .++||||+ +++|.+++...  ....+++..+..++.||+.||.|||+.||+||||||+||+++.++             
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~-------------  143 (267)
T cd08224          77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATG-------------  143 (267)
T ss_pred             EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCC-------------
Confidence            99999999 89999998652  234689999999999999999999999999999999999997666             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                    .++|+|||.+......   .....++..|+|||.+.+..++.++|||||||++|+|++|..||...
T Consensus       144 --------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  209 (267)
T cd08224         144 --------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             --------------cEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccC
Confidence                          4566666655433221   12246788999999999888999999999999999999999999654


Q ss_pred             ChH--HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          322 ENL--EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       322 ~~~--~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      ...  +....+..  +..+                        .                      ......+..+.++|
T Consensus       210 ~~~~~~~~~~~~~--~~~~------------------------~----------------------~~~~~~~~~~~~~i  241 (267)
T cd08224         210 KMNLYSLCKKIEK--CDYP------------------------P----------------------LPADHYSEELRDLV  241 (267)
T ss_pred             CccHHHHHhhhhc--CCCC------------------------C----------------------CChhhcCHHHHHHH
Confidence            311  11111110  0000                        0                      00013456889999


Q ss_pred             HHccccCCCCCCCHHHHhc
Q 013678          400 QGLLRYDPAERLKAREALR  418 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~  418 (438)
                      .+||..+|++|||+.+|++
T Consensus       242 ~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         242 SRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HHHcCCCcccCCCHHHHHH
Confidence            9999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=5.7e-40  Score=305.75  Aligned_cols=246  Identities=22%  Similarity=0.321  Sum_probs=195.7

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCc---EEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ..+|+..+.||+|+||.||+|.+..++.   .+|+|.++..  ....+.+..|+.++..+.|+|+     +++.+++...
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~   78 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNI-----IRLEGVVTKF   78 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCe-----eEEEEEEccC
Confidence            3578899999999999999999876654   7999998653  2345667889999999988877     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +..++||||+ +++|.+++.... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.            
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~------------  145 (268)
T cd05063          79 KPAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLE------------  145 (268)
T ss_pred             CCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCc------------
Confidence            9999999999 899999997653 46899999999999999999999999999999999999976654            


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCCc------ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEAL  317 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~p  317 (438)
                                     ++|+|||++........      ....+..|+|||++.+..++.++|||||||++|++++ |..|
T Consensus       146 ---------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p  210 (268)
T cd05063         146 ---------------CKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERP  210 (268)
T ss_pred             ---------------EEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCC
Confidence                           55555555543322111      0122457999999998889999999999999999997 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |...+..+....+.... ..|                                                .....+.++.+
T Consensus       211 ~~~~~~~~~~~~i~~~~-~~~------------------------------------------------~~~~~~~~~~~  241 (268)
T cd05063         211 YWDMSNHEVMKAINDGF-RLP------------------------------------------------APMDCPSAVYQ  241 (268)
T ss_pred             CCcCCHHHHHHHHhcCC-CCC------------------------------------------------CCCCCCHHHHH
Confidence            98766655444443211 000                                                11234568899


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 013678          398 LLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ++.+||+.||++||++.++++
T Consensus       242 li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         242 LMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             HHHHHcCCCcccCcCHHHHHH
Confidence            999999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=5.1e-40  Score=303.89  Aligned_cols=245  Identities=24%  Similarity=0.379  Sum_probs=196.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      .+|++.+.||+|+||.||+|.+. .+..+|+|++.........+.+|+++++.+.|+++     +++++++......|+|
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~v   77 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKL-----VQLYGVCTERSPICLV   77 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCe-----eeEEEEEccCCceEEE
Confidence            46899999999999999999875 46679999987655555678899999999988776     9999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||+ +++|.+++.... ..+++..++.++.|++.||+|||++|++|+||||+||+++.++.                  
T Consensus        78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~------------------  138 (256)
T cd05112          78 FEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQV------------------  138 (256)
T ss_pred             EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCe------------------
Confidence            9999 999999987654 35889999999999999999999999999999999999976554                  


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  325 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~  325 (438)
                               ++|+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.......
T Consensus       139 ---------~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~  209 (256)
T cd05112         139 ---------VKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE  209 (256)
T ss_pred             ---------EEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence                     5666666554332211    11234568999999998889999999999999999998 999997766554


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+......                                                 ..+...+..+.+|+.+||+.
T Consensus       210 ~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~l~~~~l~~  240 (256)
T cd05112         210 VVETINAGFRL-------------------------------------------------YKPRLASQSVYELMQHCWKE  240 (256)
T ss_pred             HHHHHhCCCCC-------------------------------------------------CCCCCCCHHHHHHHHHHccc
Confidence            44333211000                                                 00112356899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q 013678          406 DPAERLKAREALRH  419 (438)
Q Consensus       406 dP~~Rpta~ell~h  419 (438)
                      ||++|||+.+++++
T Consensus       241 ~p~~Rp~~~~~l~~  254 (256)
T cd05112         241 RPEDRPSFSLLLHQ  254 (256)
T ss_pred             ChhhCCCHHHHHHh
Confidence            99999999999863

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.3e-40  Score=308.01  Aligned_cols=245  Identities=18%  Similarity=0.252  Sum_probs=190.2

Q ss_pred             eEEEeeeeeecceEEEEEEECCC---CcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC-
Q 013678           94 CKILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN-  166 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~-  166 (438)
                      |++.+.||+|+||.||+|....+   +..||+|+++...   .....+.+|+.+++.++|+++     +++++++.... 
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~   75 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNV-----MKLIGVCFEASS   75 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCe-----eeEEeeeccCCc
Confidence            56889999999999999987653   4789999987432   234567889999999988877     99998876544 


Q ss_pred             -----eEEEEEccC-CCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccC
Q 013678          167 -----HICIVFEKL-GPSLYDFLRKNS----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  236 (438)
Q Consensus       167 -----~~~lv~e~~-~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~  236 (438)
                           ..++||||+ +++|.+++....    ...+++..+..++.|++.||.|||++||+||||||+||+++.++.    
T Consensus        76 ~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~----  151 (273)
T cd05035          76 LQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMT----  151 (273)
T ss_pred             cccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCe----
Confidence                 489999999 999999985431    236899999999999999999999999999999999999976654    


Q ss_pred             CccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHH
Q 013678          237 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL  311 (438)
Q Consensus       237 df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  311 (438)
                                             +||+|||.+.......     ....++..|+|||.+.+..++.++|||||||++|||
T Consensus       152 -----------------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el  208 (273)
T cd05035         152 -----------------------VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI  208 (273)
T ss_pred             -----------------------EEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHH
Confidence                                   5555555554332211     112346689999999888899999999999999999


Q ss_pred             Hh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC
Q 013678          312 CS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  390 (438)
Q Consensus       312 lt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (438)
                      ++ |..||.+....+....+...  ..                                               ...+..
T Consensus       209 ~~~g~~p~~~~~~~~~~~~~~~~--~~-----------------------------------------------~~~~~~  239 (273)
T cd05035         209 ATRGQTPYPGVENHEIYDYLRHG--NR-----------------------------------------------LKQPED  239 (273)
T ss_pred             HhCCCCCCCCCCHHHHHHHHHcC--CC-----------------------------------------------CCCCcC
Confidence            99 89999876654443322210  00                                               011234


Q ss_pred             chhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          391 SAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       391 ~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      ++.++.+++.+||+.||++|||+.|++++
T Consensus       240 ~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         240 CLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            56789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=3.8e-40  Score=304.53  Aligned_cols=242  Identities=22%  Similarity=0.323  Sum_probs=194.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      ++|++.+.||+|+||.||++.  .+++.||+|+++.. ...+.+.+|+.++..++|+|+     +++++++..+ ..++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~-~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~-~~~~v   76 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCD-VTAQAFLEETAVMTKLHHKNL-----VRLLGVILHN-GLYIV   76 (254)
T ss_pred             HHceeeeeeccCCCCceEecc--cCCCceEEEeecCc-chHHHHHHHHHHHHhCCCCCc-----CeEEEEEcCC-CcEEE
Confidence            568999999999999999986  46788999998653 234678889999999988887     9999988764 47999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||+ +++|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++                   
T Consensus        77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~-------------------  137 (254)
T cd05083          77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDG-------------------  137 (254)
T ss_pred             EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC-------------------
Confidence            9999 89999999876555689999999999999999999999999999999999997665                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM  329 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~  329 (438)
                              .++|+|||.+............+..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....
T Consensus       138 --------~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~  209 (254)
T cd05083         138 --------VAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKEC  209 (254)
T ss_pred             --------cEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHH
Confidence                    4566666666543332223344567999999988889999999999999999997 9999987655443332


Q ss_pred             HHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCC
Q 013678          330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  409 (438)
Q Consensus       330 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  409 (438)
                      +.+..                       +                          ......++..+.+++.+||+.+|++
T Consensus       210 ~~~~~-----------------------~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~  240 (254)
T cd05083         210 VEKGY-----------------------R--------------------------MEPPEGCPADVYVLMTSCWETEPKK  240 (254)
T ss_pred             HhCCC-----------------------C--------------------------CCCCCcCCHHHHHHHHHHcCCChhh
Confidence            22110                       0                          0011245678999999999999999


Q ss_pred             CCCHHHHhc
Q 013678          410 RLKAREALR  418 (438)
Q Consensus       410 Rpta~ell~  418 (438)
                      |||++++++
T Consensus       241 Rp~~~~l~~  249 (254)
T cd05083         241 RPSFHKLRE  249 (254)
T ss_pred             CcCHHHHHH
Confidence            999999985

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=4.1e-40  Score=308.85  Aligned_cols=246  Identities=21%  Similarity=0.346  Sum_probs=195.1

Q ss_pred             CceEEEeeeeeecceEEEEEEEC-----CCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+|++.++||+|+||.||++...     .++..+|+|.+.... .....+.+|+.+++.+.|+|+     +++++++.+.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~   79 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHI-----VRFYGVCTEG   79 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCC-----ceEEEEEecC
Confidence            56889999999999999999743     356789999886433 345678899999999998887     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSY-------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~-------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  231 (438)
                      ...++||||+ +++|.+++.....             ..+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~  159 (280)
T cd05092          80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL  159 (280)
T ss_pred             CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence            9999999999 9999999976431             2488999999999999999999999999999999999997665


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHHHH
Q 013678          232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC  306 (438)
Q Consensus       232 ~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  306 (438)
                      .                           ++|+|||++......     .....++..|+|||.+.+..++.++|||||||
T Consensus       160 ~---------------------------~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  212 (280)
T cd05092         160 V---------------------------VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGV  212 (280)
T ss_pred             C---------------------------EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHH
Confidence            4                           555555555432211     11224567899999999989999999999999


Q ss_pred             HHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhh
Q 013678          307 ILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  385 (438)
Q Consensus       307 il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (438)
                      ++|+|++ |..||......+....+.....                                                 .
T Consensus       213 il~el~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------------------------~  243 (280)
T cd05092         213 VLWEIFTYGKQPWYQLSNTEAIECITQGRE-------------------------------------------------L  243 (280)
T ss_pred             HHHHHHcCCCCCCccCCHHHHHHHHHcCcc-------------------------------------------------C
Confidence            9999998 9999976655544333321100                                                 0


Q ss_pred             hccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       386 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ..+..+++.+.+||.+||+.||++||++.|+++
T Consensus       244 ~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         244 ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            111245678999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.2e-40  Score=303.65  Aligned_cols=237  Identities=24%  Similarity=0.354  Sum_probs=187.5

Q ss_pred             eeeeeecceEEEEEEECCCC---cEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKK---ELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      ++||+|+||.||+|.+..++   ..||+|.+.....  ..+.+.+|+.+++.+.|+++     +++++++. .+..++||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~-~~~~~~v~   74 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCI-----VRLIGVCK-GEPLMLVM   74 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCe-----eeEEEEEc-CCceEEEE
Confidence            47999999999999876554   7899999875443  45678889999999988777     99999876 45689999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|.+++....  .+++..+..++.|++.||+|||++|++|+||||+|||++.++.                   
T Consensus        75 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~-------------------  133 (257)
T cd05060          75 ELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQ-------------------  133 (257)
T ss_pred             EeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCc-------------------
Confidence            999 899999998765  7899999999999999999999999999999999999987665                   


Q ss_pred             cCCCCCCCeEEecCCCCcccCCCCc------ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL  324 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~  324 (438)
                              ++|+|||.+........      ...++..|+|||.+.+..++.++|||||||++|++++ |..||...+..
T Consensus       134 --------~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~  205 (257)
T cd05060         134 --------AKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA  205 (257)
T ss_pred             --------EEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH
Confidence                    45555555443322111      1123467999999988889999999999999999998 99999776654


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +....+....                       .                          ...+..++..+.++|.+||.
T Consensus       206 ~~~~~~~~~~-----------------------~--------------------------~~~~~~~~~~l~~li~~cl~  236 (257)
T cd05060         206 EVIAMLESGE-----------------------R--------------------------LPRPEECPQEIYSIMLSCWK  236 (257)
T ss_pred             HHHHHHHcCC-----------------------c--------------------------CCCCCCCCHHHHHHHHHHhc
Confidence            4433332110                       0                          01123456789999999999


Q ss_pred             cCCCCCCCHHHHhc
Q 013678          405 YDPAERLKAREALR  418 (438)
Q Consensus       405 ~dP~~Rpta~ell~  418 (438)
                      .||++|||+.++++
T Consensus       237 ~~p~~Rp~~~~l~~  250 (257)
T cd05060         237 YRPEDRPTFSELES  250 (257)
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=6.9e-40  Score=309.82  Aligned_cols=254  Identities=21%  Similarity=0.332  Sum_probs=193.9

Q ss_pred             CCceEEEeeeeeecceEEEEEEECC----------------CCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNE----------------KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGG  152 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~  152 (438)
                      .++|++.++||+|+||.||++.+..                ++..||+|++...  ......+.+|+.+++.++|+|+  
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i--   81 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNI--   81 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCc--
Confidence            3579999999999999999986432                3457999998743  2345678899999999998877  


Q ss_pred             cceEEecceeccCCeEEEEEccC-CCCHHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 013678          153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSY---------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKP  222 (438)
Q Consensus       153 ~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  222 (438)
                         +++++++...+..++||||+ +++|.+++.....         ..+++..+..++.||+.||+|||++||+||||||
T Consensus        82 ---~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp  158 (296)
T cd05095          82 ---IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLAT  158 (296)
T ss_pred             ---ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCCh
Confidence               99999999999999999999 8999999976431         2467889999999999999999999999999999


Q ss_pred             CcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCc
Q 013678          223 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNY  297 (438)
Q Consensus       223 ~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~  297 (438)
                      +|||++.++                           .++|+|||++.......     ....++..|+|||...+..++.
T Consensus       159 ~Nili~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~  211 (296)
T cd05095         159 RNCLVGKNY---------------------------TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTT  211 (296)
T ss_pred             heEEEcCCC---------------------------CEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccc
Confidence            999997655                           45666666654332211     1123467899999998888999


Q ss_pred             chhHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHH
Q 013678          298 PCDLWSVGCILVELCS--GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW  375 (438)
Q Consensus       298 ~~DiwSlG~il~ellt--g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (438)
                      ++|||||||++|||++  |..||...+..+.........                   ....                  
T Consensus       212 ~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~-------------------~~~~------------------  254 (296)
T cd05095         212 ASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFF-------------------RDQG------------------  254 (296)
T ss_pred             hhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHH-------------------hhcc------------------
Confidence            9999999999999998  778997665544333221110                   0000                  


Q ss_pred             HhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          376 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                           ..........++..+.+|+.+||+.||.+|||+.+|++
T Consensus       255 -----~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         255 -----RQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             -----ccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                 00000112334578999999999999999999999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=6.4e-40  Score=305.35  Aligned_cols=245  Identities=24%  Similarity=0.319  Sum_probs=195.2

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCC---cEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKK---ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      .+|++.+.||+|+||.||+|.+..++   ..||+|.++..  ....+.+.+|+.+++.++|+|+     +++++++..++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   78 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNI-----IHLEGVVTKSK   78 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEecCC
Confidence            57899999999999999999886544   37999988643  2345678889999999988887     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ..|+||||+ +++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.             
T Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~-------------  144 (267)
T cd05066          79 PVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLV-------------  144 (267)
T ss_pred             ccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCe-------------
Confidence            999999999 899999998654 46899999999999999999999999999999999999976654             


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCCCc------ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALF  318 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf  318 (438)
                                    ++|+|||.+........      ...++..|+|||.+.+..++.++|+|||||++|++++ |..||
T Consensus       145 --------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~  210 (267)
T cd05066         145 --------------CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY  210 (267)
T ss_pred             --------------EEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCc
Confidence                          55566665544322111      1123467999999998889999999999999999886 99999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      ...+..+....+.+... +                                                ......+..+.++
T Consensus       211 ~~~~~~~~~~~~~~~~~-~------------------------------------------------~~~~~~~~~~~~l  241 (267)
T cd05066         211 WEMSNQDVIKAIEEGYR-L------------------------------------------------PAPMDCPAALHQL  241 (267)
T ss_pred             ccCCHHHHHHHHhCCCc-C------------------------------------------------CCCCCCCHHHHHH
Confidence            87665544433322100 0                                                0112346688999


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q 013678          399 LQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~  418 (438)
                      +.+||+.+|.+|||+.++++
T Consensus       242 i~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         242 MLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             HHHHcccCchhCCCHHHHHH
Confidence            99999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=5.6e-40  Score=306.42  Aligned_cols=244  Identities=17%  Similarity=0.251  Sum_probs=188.4

Q ss_pred             EEEeeeeeecceEEEEEEECCCCc--EEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc-----
Q 013678           95 KILSKMGEGTFGQVVECFDNEKKE--LVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-----  164 (438)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-----  164 (438)
                      .+.+.||+|+||.||+|.+..++.  .||+|.++..   ....+.+.+|+.+++.++|+|+     +++++++..     
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~   76 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNV-----MRLIGVCLQTVESE   76 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEccCCccc
Confidence            467889999999999999877765  6899988643   3345677889999999998887     998886532     


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCc
Q 013678          165 -RNHICIVFEKL-GPSLYDFLRKN----SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  238 (438)
Q Consensus       165 -~~~~~lv~e~~-~~~L~~~l~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df  238 (438)
                       ....++||||+ +++|.+++...    ....+++..+..++.||+.||+|||++||+||||||+|||++.++.      
T Consensus        77 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~------  150 (272)
T cd05075          77 GYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMN------  150 (272)
T ss_pred             CCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCC------
Confidence             23579999999 89999987532    2235899999999999999999999999999999999999976654      


Q ss_pred             cccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh
Q 013678          239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  313 (438)
Q Consensus       239 ~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt  313 (438)
                                           ++|+|||++.......     ....++..|+|||.+.+..++.++|||||||++|+|++
T Consensus       151 ---------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~  209 (272)
T cd05075         151 ---------------------VCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIAT  209 (272)
T ss_pred             ---------------------EEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHc
Confidence                                 5566666555432211     11245678999999998889999999999999999999


Q ss_pred             -CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCch
Q 013678          314 -GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  392 (438)
Q Consensus       314 -g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (438)
                       |..||.+....+....+...  ..                                               .......+
T Consensus       210 ~g~~p~~~~~~~~~~~~~~~~--~~-----------------------------------------------~~~~~~~~  240 (272)
T cd05075         210 RGQTPYPGVENSEIYDYLRQG--NR-----------------------------------------------LKQPPDCL  240 (272)
T ss_pred             CCCCCCCCCCHHHHHHHHHcC--CC-----------------------------------------------CCCCCCCC
Confidence             89999876554433322210  00                                               00112345


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          393 GDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       393 ~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      ..+.++|.+||+.||++|||+.+++++
T Consensus       241 ~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         241 DGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            688999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=1.8e-40  Score=303.42  Aligned_cols=228  Identities=24%  Similarity=0.367  Sum_probs=180.8

Q ss_pred             ecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-CCCHHH
Q 013678          103 GTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYD  181 (438)
Q Consensus       103 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~  181 (438)
                      |.+|.||++++..+++.||+|.+.....    ..+|...+....|+     |++++++++...+..|+||||+ +++|.+
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----~~~~~~~~~~~~~~-----~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   74 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----YSRERLTIIPHCVP-----NMVCLHKYIVSEDSVFLVLQHAEGGKLWS   74 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh----hhhHHHHHHhcCCC-----ceeehhhheecCCeEEEEEecCCCCCHHH
Confidence            8899999999999999999999876432    23344444444444     4599999999999999999999 899999


Q ss_pred             HHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeE
Q 013678          182 FLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK  261 (438)
Q Consensus       182 ~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~k  261 (438)
                      ++.+..  .+++..+..++.|++.||+|||++||+||||||+||+++.++                           .++
T Consensus        75 ~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~---------------------------~~~  125 (237)
T cd05576          75 HISKFL--NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRG---------------------------HIQ  125 (237)
T ss_pred             HHHHhc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC---------------------------CEE
Confidence            997654  599999999999999999999999999999999999997655                           466


Q ss_pred             EecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHH
Q 013678          262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHM  341 (438)
Q Consensus       262 l~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~  341 (438)
                      ++|||.+...........++..|+|||.+.+..++.++||||+||++|+|++|..||........               
T Consensus       126 l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~---------------  190 (237)
T cd05576         126 LTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN---------------  190 (237)
T ss_pred             EecccchhccccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc---------------
Confidence            77777655444333334567789999999888899999999999999999999988743211000               


Q ss_pred             HHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCH-----HHH
Q 013678          342 VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA-----REA  416 (438)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta-----~el  416 (438)
                                   .                          ......+..++..+.+||.+||+.||++|+|+     +++
T Consensus       191 -------------~--------------------------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~  231 (237)
T cd05576         191 -------------T--------------------------HTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDI  231 (237)
T ss_pred             -------------c--------------------------ccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHH
Confidence                         0                          00001123456789999999999999999986     999


Q ss_pred             hcCCCC
Q 013678          417 LRHPFF  422 (438)
Q Consensus       417 l~hp~f  422 (438)
                      ++||||
T Consensus       232 ~~h~~~  237 (237)
T cd05576         232 KSHPFF  237 (237)
T ss_pred             HcCCCC
Confidence            999998

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=7.4e-40  Score=310.80  Aligned_cols=248  Identities=18%  Similarity=0.304  Sum_probs=194.8

Q ss_pred             CCceEEEeeeeeecceEEEEEEEC-------CCCcEEEEEEeecc--hhhHHHHHHHHHHHHHH-HhcCCCCcceEEecc
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDN-------EKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRN  160 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~  160 (438)
                      .++|.+.+.||+|+||.||+|+..       .++..||+|.+...  ......+.+|+.+++.+ .|+|+     +++++
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----~~~~~   88 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI-----INLLG   88 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCc-----hheeE
Confidence            478999999999999999999752       23457999998643  23346688999999999 67777     99999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  225 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  225 (438)
                      ++.....+++||||+ +++|.+++....              ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus        89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni  168 (304)
T cd05101          89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV  168 (304)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence            999999999999999 899999997642              13478888999999999999999999999999999999


Q ss_pred             EEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchh
Q 013678          226 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCD  300 (438)
Q Consensus       226 li~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~D  300 (438)
                      +++.++.                           ++|+|||.+......     .....++..|+|||++.+..++.++|
T Consensus       169 li~~~~~---------------------------~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  221 (304)
T cd05101         169 LVTENNV---------------------------MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  221 (304)
T ss_pred             EEcCCCc---------------------------EEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhh
Confidence            9976664                           556666655443221     11124567899999999888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhcc
Q 013678          301 LWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR  379 (438)
Q Consensus       301 iwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (438)
                      ||||||++|+|++ |..||.+.+..+....+....                       .                     
T Consensus       222 i~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-----------------------~---------------------  257 (304)
T cd05101         222 VWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-----------------------R---------------------  257 (304)
T ss_pred             HHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-----------------------c---------------------
Confidence            9999999999998 888997765544433322100                       0                     


Q ss_pred             chhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       380 ~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                           ......++.++.+||.+||..+|++|||+.|+++.
T Consensus       258 -----~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         258 -----MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             -----CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence                 00112456789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=7.6e-40  Score=314.87  Aligned_cols=248  Identities=19%  Similarity=0.303  Sum_probs=194.7

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCC-------CcEEEEEEeecc--hhhHHHHHHHHHHHHHH-HhcCCCCcceEEecc
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEK-------KELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRN  160 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~  160 (438)
                      ..+|++.+.||+|+||.||+|++...       +..||+|+++..  ....+.+.+|+.+++++ .|+||     +++++
T Consensus        11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~   85 (334)
T cd05100          11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNI-----INLLG   85 (334)
T ss_pred             HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCe-----eeeeE
Confidence            46799999999999999999986432       236899988743  23346788999999999 68777     99999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  225 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  225 (438)
                      ++...+.+++||||+ +++|.+++....              ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus        86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni  165 (334)
T cd05100          86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNV  165 (334)
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceE
Confidence            999999999999999 999999997632              13478888999999999999999999999999999999


Q ss_pred             EEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchh
Q 013678          226 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCD  300 (438)
Q Consensus       226 li~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D  300 (438)
                      |++.++.                           ++|+|||.++......     ....++..|+|||++.+..++.++|
T Consensus       166 ll~~~~~---------------------------~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  218 (334)
T cd05100         166 LVTEDNV---------------------------MKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  218 (334)
T ss_pred             EEcCCCc---------------------------EEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhh
Confidence            9976664                           5555665554332211     1123356799999999988999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhcc
Q 013678          301 LWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR  379 (438)
Q Consensus       301 iwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (438)
                      ||||||++|||++ |..||.+.+..+....+....                                             
T Consensus       219 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~---------------------------------------------  253 (334)
T cd05100         219 VWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGH---------------------------------------------  253 (334)
T ss_pred             hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC---------------------------------------------
Confidence            9999999999998 889998766554443332100                                             


Q ss_pred             chhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       380 ~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                          ....+...+.++.+||.+||+.+|++|||+.|++++
T Consensus       254 ----~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         254 ----RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             ----CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence                001122445689999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=8.9e-40  Score=304.69  Aligned_cols=245  Identities=24%  Similarity=0.348  Sum_probs=195.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCc---EEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ..|++.+.||+|+||.||+|.+..+++   .||||++...  ......+..|+.+++.+.|+|+     +++++++..++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----~~~~~~~~~~~   78 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNI-----IHLEGVVTKSR   78 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCc-----ceEEEEECCCC
Confidence            458999999999999999999877664   5999998653  3345678899999999988887     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ..++||||+ +++|.+++.... ..+++..++.++.|++.||.|||++|++|+||||+||+++.++.             
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~-------------  144 (269)
T cd05065          79 PVMIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLV-------------  144 (269)
T ss_pred             ceEEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCc-------------
Confidence            999999999 889999997654 46899999999999999999999999999999999999976554             


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCCCc------ccc--cCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS------YVV--STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEA  316 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~--gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~  316 (438)
                                    ++|+|||.+........      ...  .+..|+|||.+.+..++.++|||||||++||+++ |..
T Consensus       145 --------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~  210 (269)
T cd05065         145 --------------CKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER  210 (269)
T ss_pred             --------------EEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCC
Confidence                          55555555543221110      011  2347999999998889999999999999999886 999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||...+..+....+.... ..                                                .....++..+.
T Consensus       211 p~~~~~~~~~~~~i~~~~-~~------------------------------------------------~~~~~~~~~~~  241 (269)
T cd05065         211 PYWDMSNQDVINAIEQDY-RL------------------------------------------------PPPMDCPTALH  241 (269)
T ss_pred             CCCCCCHHHHHHHHHcCC-cC------------------------------------------------CCcccCCHHHH
Confidence            998766555444332110 00                                                01123456889


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q 013678          397 DLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      +++.+||..||++||++.++++
T Consensus       242 ~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         242 QLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             HHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=7.5e-40  Score=320.39  Aligned_cols=248  Identities=21%  Similarity=0.322  Sum_probs=193.6

Q ss_pred             CceEEEeeeeeecceEEEEEEEC-----CCCcEEEEEEeecch--hhHHHHHHHHHHHHHHH-hcCCCCcceEEecceec
Q 013678           92 PRCKILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~  163 (438)
                      ++|.+.++||+|+||.||+|++.     .+++.||+|+++...  ...+.+.+|+.++.++. |+|+     +++++++.
T Consensus        37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~ni-----v~~~~~~~  111 (401)
T cd05107          37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI-----VNLLGACT  111 (401)
T ss_pred             HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCe-----EEEEEEEc
Confidence            56888999999999999999854     345689999997532  23356788999999997 7766     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCC------------------------------------------------------
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSY------------------------------------------------------  188 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~------------------------------------------------------  188 (438)
                      .++.+++||||| +|+|.+++.+...                                                      
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP  191 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence            999999999999 9999999975321                                                      


Q ss_pred             ------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEE
Q 013678          189 ------------------------------------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL  226 (438)
Q Consensus       189 ------------------------------------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  226 (438)
                                                                ..+++..+..++.||+.||+|||+++|+||||||+|||
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiL  271 (401)
T cd05107         192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVL  271 (401)
T ss_pred             hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEE
Confidence                                                      23677788999999999999999999999999999999


Q ss_pred             EecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhH
Q 013678          227 LVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDL  301 (438)
Q Consensus       227 i~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di  301 (438)
                      ++.++.                           ++|+|||++......     .....++..|+|||.+.+..++.++||
T Consensus       272 l~~~~~---------------------------~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  324 (401)
T cd05107         272 ICEGKL---------------------------VKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDV  324 (401)
T ss_pred             EeCCCE---------------------------EEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHH
Confidence            976554                           566666665532211     112356788999999998889999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccc
Q 013678          302 WSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL  380 (438)
Q Consensus       302 wSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (438)
                      |||||++|||++ |..||......+........ + .                                           
T Consensus       325 wslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~-~-~-------------------------------------------  359 (401)
T cd05107         325 WSFGILLWEIFTLGGTPYPELPMNEQFYNAIKR-G-Y-------------------------------------------  359 (401)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHc-C-C-------------------------------------------
Confidence            999999999998 89999765443332221110 0 0                                           


Q ss_pred             hhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       381 ~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                         ....+..++.++.+||.+||..||.+||++.||++.
T Consensus       360 ---~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         360 ---RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             ---CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence               001122456789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=5.5e-40  Score=308.42  Aligned_cols=259  Identities=22%  Similarity=0.311  Sum_probs=190.5

Q ss_pred             CCce-EEEeeeeeecceEEEEEE----ECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           91 TPRC-KILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        91 ~~~y-~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      .+|| ++++.||+|+||+||++.    ...++..||+|.++...  .....+.+|+.+++.++|+|+     +++++++.
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~   76 (283)
T cd05080           2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENI-----VKYKGCCS   76 (283)
T ss_pred             ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEe
Confidence            3566 999999999999998864    34567889999987532  245677889999999988877     99999876


Q ss_pred             c--CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          164 Y--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       164 ~--~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                      .  ...+++||||+ +++|.+++...   .+++..++.++.|++.||+|||++||+||||||+|||++.++.        
T Consensus        77 ~~~~~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~--------  145 (283)
T cd05080          77 EQGGKGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRL--------  145 (283)
T ss_pred             cCCCceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCc--------
Confidence            4  34689999999 99999999764   4999999999999999999999999999999999999976654        


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhC
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg  314 (438)
                                         ++|+|||++.......      ....++..|+|||.+.+..++.++|||||||++|+|++|
T Consensus       146 -------------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg  206 (283)
T cd05080         146 -------------------VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTH  206 (283)
T ss_pred             -------------------EEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhC
Confidence                               5666666655432211      112346679999999888899999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      ..||......- ...+....+....                             ........    ...........+.+
T Consensus       207 ~~p~~~~~~~~-~~~~~~~~~~~~~-----------------------------~~~~~~~~----~~~~~~~~~~~~~~  252 (283)
T cd05080         207 CDSKQSPPKKF-EEMIGPKQGQMTV-----------------------------VRLIELLE----RGMRLPCPKNCPQE  252 (283)
T ss_pred             CCCCCCCcchh-hhhhcccccccch-----------------------------hhhhhhhh----cCCCCCCCCCCCHH
Confidence            99986533210 0000000000000                             00000000    00001112345678


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhc
Q 013678          395 LIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      +.+++.+||+.||++|||++++++
T Consensus       253 ~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         253 VYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             HHHHHHHHhccChhhCCCHHHHHH
Confidence            999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=5.4e-40  Score=316.91  Aligned_cols=249  Identities=23%  Similarity=0.343  Sum_probs=189.5

Q ss_pred             CCceEEEeeeeeecceEEEEEEE-----CCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHH-hcCCCCcceEEeccee
Q 013678           91 TPRCKILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWF  162 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~  162 (438)
                      .++|++.+.||+|+||.||+|.+     ..+++.||||+++...  .....+.+|+.++..+. |+|+     +++++++
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni-----v~~~~~~   80 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV-----VNLLGAC   80 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccH-----hhhccee
Confidence            36899999999999999999984     3567899999997532  33456788999999994 5565     9999877


Q ss_pred             cc-CCeEEEEEccC-CCCHHHHHHhcCC----------------------------------------------------
Q 013678          163 DY-RNHICIVFEKL-GPSLYDFLRKNSY----------------------------------------------------  188 (438)
Q Consensus       163 ~~-~~~~~lv~e~~-~~~L~~~l~~~~~----------------------------------------------------  188 (438)
                      .. +..+++||||| +++|.+++.....                                                    
T Consensus        81 ~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (343)
T cd05103          81 TKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSD  160 (343)
T ss_pred             ecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcccc
Confidence            54 45789999999 9999999875321                                                    


Q ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCC
Q 013678          189 -------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  255 (438)
Q Consensus       189 -------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~  255 (438)
                                   ..+++..+..++.||+.||+|||++||+||||||+|||++.++                        
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~------------------------  216 (343)
T cd05103         161 VEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENN------------------------  216 (343)
T ss_pred             chhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCC------------------------
Confidence                         2367788899999999999999999999999999999997655                        


Q ss_pred             CCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 013678          256 KSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM  329 (438)
Q Consensus       256 ~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~  329 (438)
                         .++|+|||++.......     ....++..|+|||.+.+..++.++|||||||++|+|++ |..||...........
T Consensus       217 ---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~  293 (343)
T cd05103         217 ---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR  293 (343)
T ss_pred             ---cEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHH
Confidence               46666666665432111     11234667999999998889999999999999999997 9999976443222111


Q ss_pred             HHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCC
Q 013678          330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  409 (438)
Q Consensus       330 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  409 (438)
                      .... +.                     .                          ...+...++++.+++.+||+.||++
T Consensus       294 ~~~~-~~---------------------~--------------------------~~~~~~~~~~~~~~~~~cl~~~p~~  325 (343)
T cd05103         294 RLKE-GT---------------------R--------------------------MRAPDYTTPEMYQTMLDCWHGEPSQ  325 (343)
T ss_pred             HHhc-cC---------------------C--------------------------CCCCCCCCHHHHHHHHHHccCChhh
Confidence            1100 00                     0                          0011224567899999999999999


Q ss_pred             CCCHHHHhcC
Q 013678          410 RLKAREALRH  419 (438)
Q Consensus       410 Rpta~ell~h  419 (438)
                      |||+.||++|
T Consensus       326 Rps~~eil~~  335 (343)
T cd05103         326 RPTFSELVEH  335 (343)
T ss_pred             CcCHHHHHHH
Confidence            9999999976

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=9.1e-40  Score=306.32  Aligned_cols=244  Identities=21%  Similarity=0.240  Sum_probs=187.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCc----EEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      +.|++.+.||+|+||.||+|.+..+++    .|++|.+....  .....+..|+.++..+.|+|+     +++++++.. 
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~i-----v~~~~~~~~-   80 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYI-----VRLLGICPG-   80 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCc-----ceEEEEECC-
Confidence            578999999999999999999877776    47777775322  223456677778887777776     999998754 


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      ...++|+||+ +++|.+++.... ..+++..+..++.||+.||.|||++|++||||||+|||++.++             
T Consensus        81 ~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~-------------  146 (279)
T cd05111          81 ASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDS-------------  146 (279)
T ss_pred             CccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC-------------
Confidence            5678899999 999999997654 4689999999999999999999999999999999999997665             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALF  318 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf  318 (438)
                                    .+||+|||.+......     .....++..|+|||.+.+..++.++|||||||++||+++ |..||
T Consensus       147 --------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~  212 (279)
T cd05111         147 --------------IVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPY  212 (279)
T ss_pred             --------------cEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCC
Confidence                          4566666655433211     112356778999999998889999999999999999998 99999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      .+.........+...  ..                     .                          ......+.++.++
T Consensus       213 ~~~~~~~~~~~~~~~--~~---------------------~--------------------------~~~~~~~~~~~~l  243 (279)
T cd05111         213 AGMRPHEVPDLLEKG--ER---------------------L--------------------------AQPQICTIDVYMV  243 (279)
T ss_pred             CCCCHHHHHHHHHCC--Cc---------------------C--------------------------CCCCCCCHHHHHH
Confidence            876544332222110  00                     0                          0011234578899


Q ss_pred             HHHccccCCCCCCCHHHHhc
Q 013678          399 LQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~  418 (438)
                      +.+||..||++|||+.|+++
T Consensus       244 i~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         244 MVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             HHHHcCCCcccCcCHHHHHH
Confidence            99999999999999999976

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=9.3e-40  Score=307.67  Aligned_cols=247  Identities=19%  Similarity=0.306  Sum_probs=194.1

Q ss_pred             CCceEEEeeeeeecceEEEEEEECC-----CCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      .++|++.+.||+|+||.||+|.+..     ++..||+|++....  .....+.+|+.+++.+.|+++     +++++++.
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-----v~~~~~~~   78 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNI-----VKLLGVCA   78 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCch-----heEEEEEc
Confidence            3578999999999999999998743     67889999986532  334668889999999988887     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNS--------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKP  222 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~--------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  222 (438)
                      .+...|+||||+ +++|.+++....                    ...+++..+..++.||+.||+|||++|++||||||
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p  158 (288)
T cd05050          79 VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLAT  158 (288)
T ss_pred             CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccH
Confidence            999999999999 899999997532                    12477888999999999999999999999999999


Q ss_pred             CcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCc
Q 013678          223 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNY  297 (438)
Q Consensus       223 ~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~  297 (438)
                      +||+++.++.                           ++|+|||.+......     .....++..|+|||.+.+..++.
T Consensus       159 ~nil~~~~~~---------------------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  211 (288)
T cd05050         159 RNCLVGENMV---------------------------VKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTT  211 (288)
T ss_pred             hheEecCCCc---------------------------eEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCc
Confidence            9999976664                           555555555432211     11123456799999999889999


Q ss_pred             chhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHH
Q 013678          298 PCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK  376 (438)
Q Consensus       298 ~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (438)
                      ++|||||||++|+|++ |..||.+.+..+....+...  ..                                       
T Consensus       212 ~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~--~~---------------------------------------  250 (288)
T cd05050         212 ESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDG--NV---------------------------------------  250 (288)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC--CC---------------------------------------
Confidence            9999999999999997 88899766554443322210  00                                       


Q ss_pred             hccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          377 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                              .......+.++.+||.+||+.||++|||+.|+++
T Consensus       251 --------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         251 --------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             --------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                    0011234568999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=9.6e-40  Score=307.59  Aligned_cols=253  Identities=27%  Similarity=0.406  Sum_probs=196.7

Q ss_pred             ceEEEeeeeeecceEEEEEEEC---CCCcEEEEEEeecch-----hhHHHHHHHHHHHHHHH-hcCCCCcceEEecceec
Q 013678           93 RCKILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~  163 (438)
                      +|++.+.||+|+||.||++++.   .+++.||||++++..     ...+.+.+|+.++..+. |+++     +++++.+.
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i-----~~~~~~~~   75 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFL-----VTLHYAFQ   75 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcch-----hhhheeee
Confidence            4789999999999999999864   467889999987432     23355678999999995 6666     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      .+...|+||||+ +++|.+++....  .+++..++.++.|++.||.|||+.|++||||||+||+++.++           
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~-----------  142 (288)
T cd05583          76 TDTKLHLILDYVNGGELFTHLYQRE--HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEG-----------  142 (288)
T ss_pred             cCCEEEEEEecCCCCcHHHHHhhcC--CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC-----------
Confidence            999999999999 899999987653  689999999999999999999999999999999999997655           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCC--CCcchhHHHHHHHHHHHHhCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLG--WNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltg~~  316 (438)
                                      .++|+|||++.......    ....|+..|+|||.+.+..  .+.++||||||+++|+|++|..
T Consensus       143 ----------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~  206 (288)
T cd05583         143 ----------------HVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGAS  206 (288)
T ss_pred             ----------------CEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCC
Confidence                            46677777665432221    1246788999999987765  7889999999999999999999


Q ss_pred             CCCCCChHHHHHHHHH-HhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          317 LFQTHENLEHLAMMER-VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      ||...........+.+ ....                                               ....+...+..+
T Consensus       207 p~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~l  239 (288)
T cd05583         207 PFTVDGEQNSQSEISRRILKS-----------------------------------------------KPPFPKTMSAEA  239 (288)
T ss_pred             CcccCcccchHHHHHHHHHcc-----------------------------------------------CCCCCcccCHHH
Confidence            9964332211111111 0000                                               001112345688


Q ss_pred             HHHHHHccccCCCCCCC---HHHHhcCCCCCCCC
Q 013678          396 IDLLQGLLRYDPAERLK---AREALRHPFFTRDV  426 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpt---a~ell~hp~f~~~~  426 (438)
                      .++|.+||+.||++|||   +.++|+||||+...
T Consensus       240 ~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~  273 (288)
T cd05583         240 RDFIQKLLEKDPKKRLGANGADEIKNHPFFQGID  273 (288)
T ss_pred             HHHHHHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence            99999999999999998   56789999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=9.1e-40  Score=308.08  Aligned_cols=245  Identities=18%  Similarity=0.328  Sum_probs=192.1

Q ss_pred             ceEEEeeeeeecceEEEEEEECC-----CCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           93 RCKILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      +|++.+.||+|+||.||+|.+..     ....+++|.+....  .....+.+|+.+++.+.|+||     +++++.+...
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~   75 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHV-----IKLYGACSQD   75 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCE-----eeEEEEEecC
Confidence            47889999999999999998753     23568999886433  234567889999999988877     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNS----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKP  222 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  222 (438)
                      +..++||||+ +++|.+++....                      ...+++..+..++.|++.||+|||++||+||||||
T Consensus        76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp  155 (290)
T cd05045          76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAA  155 (290)
T ss_pred             CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhh
Confidence            9999999999 899999986421                      13478899999999999999999999999999999


Q ss_pred             CcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCc
Q 013678          223 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNY  297 (438)
Q Consensus       223 ~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~  297 (438)
                      +|||++.++                           .++|+|||++.......     ....++..|+|||.+.+..++.
T Consensus       156 ~nill~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~  208 (290)
T cd05045         156 RNVLVAEGR---------------------------KMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTT  208 (290)
T ss_pred             heEEEcCCC---------------------------cEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcch
Confidence            999997655                           45666666654322111     1124567899999998888999


Q ss_pred             chhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHH
Q 013678          298 PCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK  376 (438)
Q Consensus       298 ~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (438)
                      ++|||||||++|+|++ |..||.+.........+....                                          
T Consensus       209 ~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~------------------------------------------  246 (290)
T cd05045         209 QSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGY------------------------------------------  246 (290)
T ss_pred             HhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC------------------------------------------
Confidence            9999999999999998 999997765444332221100                                          


Q ss_pred             hccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          377 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                             .......++.++.+++.+||+.||++||++.|+++
T Consensus       247 -------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         247 -------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             -------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence                   00112345678999999999999999999999975

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=1.2e-39  Score=301.37  Aligned_cols=243  Identities=23%  Similarity=0.364  Sum_probs=196.2

Q ss_pred             EEEeeeeeecceEEEEEEECCCC----cEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           95 KILSKMGEGTFGQVVECFDNEKK----ELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ++.+.||.|+||.||+|.+...+    ..||+|++.....  ..+.+..|+.++..+.|+++     +++++++.+.+..
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~   76 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNI-----VKLLGVCTEEEPL   76 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCch-----heEEEEEcCCCee
Confidence            57789999999999999998766    8899999975443  46678899999999988777     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      +++|||+ +++|.+++.......+++..+..++.||+.||+|||+.|++|+||||+||+++.++.               
T Consensus        77 ~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~---------------  141 (258)
T smart00219       77 MIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLV---------------  141 (258)
T ss_pred             EEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCe---------------
Confidence            9999999 999999998655333999999999999999999999999999999999999977664               


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCCcc----cccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSY----VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHE  322 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~----~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~  322 (438)
                                  ++|+|||.+.........    ..++..|+|||.+.+..++.++|||||||++|+|++ |..||...+
T Consensus       142 ------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~  209 (258)
T smart00219      142 ------------VKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS  209 (258)
T ss_pred             ------------EEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Confidence                        555555555443322111    136788999999988889999999999999999998 889997765


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      .......+.....                                                 .......+.++.+++.+|
T Consensus       210 ~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~~i~~~  240 (258)
T smart00219      210 NEEVLEYLKKGYR-------------------------------------------------LPKPENCPPEIYKLMLQC  240 (258)
T ss_pred             HHHHHHHHhcCCC-------------------------------------------------CCCCCcCCHHHHHHHHHH
Confidence            5554443322100                                                 001123567899999999


Q ss_pred             cccCCCCCCCHHHHhc
Q 013678          403 LRYDPAERLKAREALR  418 (438)
Q Consensus       403 L~~dP~~Rpta~ell~  418 (438)
                      |..||++|||+.|+++
T Consensus       241 l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      241 WAEDPEDRPTFSELVE  256 (258)
T ss_pred             CcCChhhCcCHHHHHh
Confidence            9999999999999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-41  Score=327.51  Aligned_cols=202  Identities=29%  Similarity=0.409  Sum_probs=175.7

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec--chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC----
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR----  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~----  165 (438)
                      ..|...+.||+|+||.||+++++.+|+.||||.++.  .....+...+|+++|++|+|+||     |+++++-++.    
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NI-----Vk~f~iee~~~~~~   87 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNI-----VKLFDIEETKFLGL   87 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhh-----hhhcccCCccccCc
Confidence            345777899999999999999999999999999975  34566788899999999999988     9999986653    


Q ss_pred             --CeEEEEEccC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          166 --NHICIVFEKL-GPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       166 --~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                        ....+||||| ||||...+.+-. ...+++.+++.++.++..||.|||++||+||||||.||++....          
T Consensus        88 ~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ge----------  157 (732)
T KOG4250|consen   88 VTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGE----------  157 (732)
T ss_pred             ccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecC----------
Confidence              3678999999 999999998532 24699999999999999999999999999999999999985432          


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                   +.....||+|||.|+..++..  .+.+||..|.+||+... ..|+.-+|.|||||++|+.+||..||
T Consensus       158 -------------dgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF  224 (732)
T KOG4250|consen  158 -------------DGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPF  224 (732)
T ss_pred             -------------CCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCC
Confidence                         345578999999999876654  55799999999999995 77999999999999999999999999


Q ss_pred             CCC
Q 013678          319 QTH  321 (438)
Q Consensus       319 ~~~  321 (438)
                      ...
T Consensus       225 ~p~  227 (732)
T KOG4250|consen  225 IPF  227 (732)
T ss_pred             CcC
Confidence            543

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=1.7e-39  Score=300.61  Aligned_cols=240  Identities=23%  Similarity=0.318  Sum_probs=190.9

Q ss_pred             eeeeeecceEEEEEEECC-CC--cEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNE-KK--ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~-~~--~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +.||+|++|.||+|.+.. .+  ..||||.+....  ...+.+.+|+.++++++|+|+     +++++++.. ...++||
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~-~~~~~v~   74 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENL-----IRLYGVVLT-HPLMMVT   74 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCc-----cceeEEEcC-CeEEEEE
Confidence            468999999999998765 33  369999987543  345678899999999998887     999999888 8999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||+ +++|.+++.......+++..+..++.|++.||+|||++|++|+||||+||+++.++.+                  
T Consensus        75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~------------------  136 (257)
T cd05040          75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKV------------------  136 (257)
T ss_pred             EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEE------------------
Confidence            999 9999999987543468999999999999999999999999999999999999877655                  


Q ss_pred             cCCCCCCCeEEecCCCCcccCCC------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL  324 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~  324 (438)
                               ||+|||++......      .....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..
T Consensus       137 ---------kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~  207 (257)
T cd05040         137 ---------KIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS  207 (257)
T ss_pred             ---------EeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH
Confidence                     45555544433221      112356778999999998889999999999999999998 99999876665


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +....+......                                                .......+..+.+++.+||+
T Consensus       208 ~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~li~~~l~  239 (257)
T cd05040         208 QILKKIDKEGER------------------------------------------------LERPEACPQDIYNVMLQCWA  239 (257)
T ss_pred             HHHHHHHhcCCc------------------------------------------------CCCCccCCHHHHHHHHHHCC
Confidence            544443321000                                                00112345689999999999


Q ss_pred             cCCCCCCCHHHHhc
Q 013678          405 YDPAERLKAREALR  418 (438)
Q Consensus       405 ~dP~~Rpta~ell~  418 (438)
                      .+|++|||+.++++
T Consensus       240 ~~p~~Rps~~~~~~  253 (257)
T cd05040         240 HNPADRPTFAALRE  253 (257)
T ss_pred             CCcccCCCHHHHHH
Confidence            99999999999986

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-42  Score=319.52  Aligned_cols=252  Identities=27%  Similarity=0.429  Sum_probs=216.6

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      .+.+++..||-|+||.|-++........+|+|++++.    ....+....|-.||...+.+.|     |++|..|.+..+
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fI-----vrLYrTfrd~ky  494 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFI-----VRLYRTFRDSKY  494 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHH-----HHHHHHhccchh
Confidence            5567888899999999999987766667899998763    3456777889999999887777     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|++||-| ||.|+..++.++  .+....++.|+..++.|++|||++|||+|||||+|.|++.+|.              
T Consensus       495 vYmLmEaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy--------------  558 (732)
T KOG0614|consen  495 VYMLMEACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGY--------------  558 (732)
T ss_pred             hhhhHHhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCc--------------
Confidence            99999999 999999999876  8999999999999999999999999999999999999988774              


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                   +||.|||+|+......  -+++||+.|.|||++++...+.++|.||||+++|||++|.+||++.+..
T Consensus       559 -------------~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm  625 (732)
T KOG0614|consen  559 -------------LKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM  625 (732)
T ss_pred             -------------eEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH
Confidence                         5667777776654443  3479999999999999999999999999999999999999999999988


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      ..+..|.+.+..                                                +..+..+.....+||+++..
T Consensus       626 ktYn~ILkGid~------------------------------------------------i~~Pr~I~k~a~~Lik~LCr  657 (732)
T KOG0614|consen  626 KTYNLILKGIDK------------------------------------------------IEFPRRITKTATDLIKKLCR  657 (732)
T ss_pred             HHHHHHHhhhhh------------------------------------------------hhcccccchhHHHHHHHHHh
Confidence            888777654311                                                12223556688999999999


Q ss_pred             cCCCCCCC-----HHHHhcCCCCCCC
Q 013678          405 YDPAERLK-----AREALRHPFFTRD  425 (438)
Q Consensus       405 ~dP~~Rpt-----a~ell~hp~f~~~  425 (438)
                      .+|.+|..     +.+|-+|.||.+-
T Consensus       658 ~~P~ERLG~~~~gI~DIkkH~Wf~gf  683 (732)
T KOG0614|consen  658 DNPTERLGYQKGGINDIKKHRWFEGF  683 (732)
T ss_pred             cCcHhhhccccCChHHHHhhhhhhcC
Confidence            99999995     8999999999764

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1.4e-39  Score=301.23  Aligned_cols=237  Identities=24%  Similarity=0.365  Sum_probs=185.6

Q ss_pred             eeeeecceEEEEEEEC--CCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEcc
Q 013678           99 KMGEGTFGQVVECFDN--EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK  174 (438)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~  174 (438)
                      .||+|+||.||+|.+.  .++..||+|++....  ...+.+.+|+.+++.+.|+|+     ++++++++. ...++||||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----i~~~~~~~~-~~~~lv~e~   75 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYI-----VRMIGVCEA-EALMLVMEM   75 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCe-----EEEEEEEcC-CCeEEEEEe
Confidence            4899999999999764  445679999986532  334668899999999988877     999998764 578999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccC
Q 013678          175 L-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  253 (438)
Q Consensus       175 ~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~  253 (438)
                      + +++|.+++.... ..+++..+..++.||+.||+|||++|++||||||+||+++.++.                     
T Consensus        76 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~---------------------  133 (257)
T cd05115          76 ASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHY---------------------  133 (257)
T ss_pred             CCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCc---------------------
Confidence            9 999999987543 46899999999999999999999999999999999999976654                     


Q ss_pred             CCCCCCeEEecCCCCcccCCCCc------ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 013678          254 LPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEH  326 (438)
Q Consensus       254 ~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~  326 (438)
                            +||+|||.+........      ...++..|+|||.+.+..++.++|||||||++|++++ |..||......+.
T Consensus       134 ------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~  207 (257)
T cd05115         134 ------AKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV  207 (257)
T ss_pred             ------EEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH
Confidence                  55666665543322111      1123568999999988889999999999999999996 9999987665544


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      ...+....                       .                          ...+...++++.++|.+||..|
T Consensus       208 ~~~~~~~~-----------------------~--------------------------~~~~~~~~~~l~~li~~c~~~~  238 (257)
T cd05115         208 MSFIEQGK-----------------------R--------------------------LDCPAECPPEMYALMKDCWIYK  238 (257)
T ss_pred             HHHHHCCC-----------------------C--------------------------CCCCCCCCHHHHHHHHHHcCCC
Confidence            33332110                       0                          0112244678999999999999


Q ss_pred             CCCCCCHHHHhc
Q 013678          407 PAERLKAREALR  418 (438)
Q Consensus       407 P~~Rpta~ell~  418 (438)
                      |++||++.++++
T Consensus       239 ~~~Rp~~~~i~~  250 (257)
T cd05115         239 WEDRPNFAKVEE  250 (257)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-40  Score=319.73  Aligned_cols=245  Identities=23%  Similarity=0.328  Sum_probs=198.4

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCc---E-EEEEEeec----chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKE---L-VAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~---~-vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      +-.+.++||+|+||.||+|..+..+.   . ||+|..+.    .......+++|.++++.++|+||     |+++|+...
T Consensus       158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NV-----Vr~yGVa~~  232 (474)
T KOG0194|consen  158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNV-----VRFYGVAVL  232 (474)
T ss_pred             CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCE-----EEEEEEEcC
Confidence            33456899999999999998765422   3 89998873    24567888999999999999888     999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      ...++||||+| ||+|.++|++.. ..++..+...++.+.+.||+|||++++|||||-.+|+|++.++.+          
T Consensus       233 ~~Pl~ivmEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~v----------  301 (474)
T KOG0194|consen  233 EEPLMLVMELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVV----------  301 (474)
T ss_pred             CCccEEEEEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeE----------
Confidence            99999999999 999999999876 369999999999999999999999999999999999999876654          


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCCC--c-ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--S-YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQ  319 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~  319 (438)
                                       ||+|||+++....-.  . ...-...|+|||.+....|+.++|||||||++||+++ |..||.
T Consensus       302 -----------------KISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~  364 (474)
T KOG0194|consen  302 -----------------KISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYP  364 (474)
T ss_pred             -----------------EeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCC
Confidence                             555555544332100  0 1123467999999999999999999999999999999 889999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      +....+....+..-...                                                ...+...+..+..++
T Consensus       365 g~~~~~v~~kI~~~~~r------------------------------------------------~~~~~~~p~~~~~~~  396 (474)
T KOG0194|consen  365 GMKNYEVKAKIVKNGYR------------------------------------------------MPIPSKTPKELAKVM  396 (474)
T ss_pred             CCCHHHHHHHHHhcCcc------------------------------------------------CCCCCCCHHHHHHHH
Confidence            99888777766332111                                                111224466888999


Q ss_pred             HHccccCCCCCCCHHHHhc
Q 013678          400 QGLLRYDPAERLKAREALR  418 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~  418 (438)
                      .+|+..||++|+|+.++.+
T Consensus       397 ~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  397 KQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             HHhccCChhhccCHHHHHH
Confidence            9999999999999988764

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=1.6e-39  Score=303.25  Aligned_cols=240  Identities=22%  Similarity=0.286  Sum_probs=186.0

Q ss_pred             eeeeeecceEEEEEEECCCCc--EEEEEEeecc--hhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKE--LVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +.||+|+||.||+|++..++.  .+|+|.++..  ....+.+.+|+.++.++ .|+|+     +++++++...+.+++||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~~~~~~~~~~lv~   75 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI-----INLLGACEHRGYLYLAI   75 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCe-----eeEEEEEecCCCceEEE
Confidence            358999999999999988775  4688887642  33456778899999999 67666     99999999999999999


Q ss_pred             ccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 013678          173 EKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      ||+ +++|.+++....              ...+++..++.++.|++.||+|||++|++||||||+||+++.++.     
T Consensus        76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~-----  150 (270)
T cd05047          76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV-----  150 (270)
T ss_pred             EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCe-----
Confidence            999 999999997542              124789999999999999999999999999999999999977664     


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCc--ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-C
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS--YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G  314 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g  314 (438)
                                            ++|+|||++........  ....+..|+|||++.+..++.++|||||||++|||++ |
T Consensus       151 ----------------------~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g  208 (270)
T cd05047         151 ----------------------AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG  208 (270)
T ss_pred             ----------------------EEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCC
Confidence                                  55555555532211111  1123557999999988889999999999999999997 9


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      ..||.+.+..+....+....                                                 ........+.+
T Consensus       209 ~~pf~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~  239 (270)
T cd05047         209 GTPYCGMTCAELYEKLPQGY-------------------------------------------------RLEKPLNCDDE  239 (270)
T ss_pred             CCCccccCHHHHHHHHhCCC-------------------------------------------------CCCCCCcCCHH
Confidence            99997655444333221100                                                 00011234568


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhc
Q 013678          395 LIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      +.+|+.+||+.||.+|||+.++++
T Consensus       240 ~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         240 VYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             HHHHHHHHcccChhhCCCHHHHHH
Confidence            899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=1.9e-39  Score=303.37  Aligned_cols=248  Identities=19%  Similarity=0.279  Sum_probs=195.3

Q ss_pred             CceEEEeeeeeecceEEEEEEECC-----CCcEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      ++|++++.||+|+||.||+|+.+.     +.+.|++|.+.....  ..+.+.+|+.++++++|+++     +++++++.+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~   79 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNV-----VRLLGLCRE   79 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcce-----eeeEEEECC
Confidence            578999999999999999999654     346799998864332  35678899999999998877     999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCC-------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccC
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSY-------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  236 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~  236 (438)
                      ....|+||||+ +++|.+++.....       ..+++..+..++.||+.||+|||++||+||||||+||+++.++.++  
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~--  157 (275)
T cd05046          80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVK--  157 (275)
T ss_pred             CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEE--
Confidence            89999999999 8999999976541       1589999999999999999999999999999999999998776554  


Q ss_pred             CccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHH
Q 013678          237 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC  312 (438)
Q Consensus       237 df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell  312 (438)
                                               |+|||.+......    .....++..|+|||.+.+..++.++|||||||++|+++
T Consensus       158 -------------------------l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~  212 (275)
T cd05046         158 -------------------------VSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVF  212 (275)
T ss_pred             -------------------------EcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHH
Confidence                                     4555544322111    11235567799999998888899999999999999999


Q ss_pred             h-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCc
Q 013678          313 S-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  391 (438)
Q Consensus       313 t-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (438)
                      + |..||...........+....                        ..|                        ......
T Consensus       213 ~~~~~p~~~~~~~~~~~~~~~~~------------------------~~~------------------------~~~~~~  244 (275)
T cd05046         213 TQGELPFYGLSDEEVLNRLQAGK------------------------LEL------------------------PVPEGC  244 (275)
T ss_pred             hCCCCCccccchHHHHHHHHcCC------------------------cCC------------------------CCCCCC
Confidence            8 888997655544333221100                        000                        112345


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          392 AGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       392 ~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      +..+.+++.+||+.||++|||+.|++++
T Consensus       245 ~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         245 PSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            6789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=2.8e-39  Score=327.74  Aligned_cols=274  Identities=20%  Similarity=0.283  Sum_probs=177.9

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCC----CcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecce-----
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEK----KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW-----  161 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~-----  161 (438)
                      .++|++.++||+|+||.||+|.+..+    +..||+|++..... .     |+.....+.+...  .++..+...     
T Consensus       131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-~-----e~~~~e~l~~~~~--~~~~~~~~~~~~~~  202 (566)
T PLN03225        131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-V-----EIWMNERVRRACP--NSCADFVYGFLEPV  202 (566)
T ss_pred             cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-h-----HHHHHHHHHhhch--hhHHHHHHhhhccc
Confidence            46899999999999999999999988    89999998764221 1     2222222222110  011111111     


Q ss_pred             -eccCCeEEEEEccC-CCCHHHHHHhcCCC------------------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 013678          162 -FDYRNHICIVFEKL-GPSLYDFLRKNSYR------------------SFPIDLVRELGRQLLESVAFMHELRLIHTDLK  221 (438)
Q Consensus       162 -~~~~~~~~lv~e~~-~~~L~~~l~~~~~~------------------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  221 (438)
                       ...+...+|||||+ +++|.+++......                  ......+..++.||+.||+|||++||+|||||
T Consensus       203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK  282 (566)
T PLN03225        203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK  282 (566)
T ss_pred             ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence             24566899999999 89999998754310                  11234567899999999999999999999999


Q ss_pred             CCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCCC---
Q 013678          222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLG---  294 (438)
Q Consensus       222 p~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~---  294 (438)
                      |+|||++.+                          +..+||+|||+|......    .....+|+.|+|||.+....   
T Consensus       283 P~NILl~~~--------------------------~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~  336 (566)
T PLN03225        283 PQNIIFSEG--------------------------SGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTP  336 (566)
T ss_pred             HHHEEEeCC--------------------------CCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCC
Confidence            999999642                          235788888887654322    23457899999999765322   


Q ss_pred             -------------------CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcC
Q 013678          295 -------------------WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR  355 (438)
Q Consensus       295 -------------------~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~  355 (438)
                                         ++.++|||||||+||||+++..++.  +....+..+....+.....|.....         
T Consensus       337 ~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~---------  405 (566)
T PLN03225        337 SAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSD--SNLIQFNRQLKRNDYDLVAWRKLVE---------  405 (566)
T ss_pred             CCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCc--hHHHHHHHHHHhcCCcHHHHHHhhc---------
Confidence                               3346799999999999998766543  2333332222222111111100000         


Q ss_pred             CCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          356 GARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                             . ... ...          .......+.......+||.+||++||++|||+.|+|+||||++....
T Consensus       406 -------~-~~~-~~~----------~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~  459 (566)
T PLN03225        406 -------P-RAS-PDL----------RRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGLL  459 (566)
T ss_pred             -------c-ccc-hhh----------hhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCcc
Confidence                   0 000 000          00011112234467799999999999999999999999999886544

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.2e-39  Score=300.91  Aligned_cols=244  Identities=22%  Similarity=0.268  Sum_probs=186.8

Q ss_pred             eeeeeecceEEEEEEECC------------CCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           98 SKMGEGTFGQVVECFDNE------------KKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~------------~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      +.||+|+||.||+|....            ....|++|.+.... .....+.+|+.++..++|+|+     +++++++..
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~i-----v~~~~~~~~   75 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHI-----VLLYGVCVR   75 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCE-----eeEEEEEec
Confidence            468999999999997532            22358999876433 233466778889999988877     999999998


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      ....++||||+ +++|..++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++..+         
T Consensus        76 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~---------  145 (262)
T cd05077          76 DVENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDG---------  145 (262)
T ss_pred             CCCCEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccC---------
Confidence            88999999999 889988887543 4689999999999999999999999999999999999997655211         


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHh-CCCCCcchhHHHHHHHHHHHH-hCCCCCCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELC-SGEALFQTH  321 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~ell-tg~~pf~~~  321 (438)
                                 .....++++|||.+...... ....++..|+|||.+. +..++.++|||||||++|+|+ +|..||...
T Consensus       146 -----------~~~~~~~l~d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~  213 (262)
T cd05077         146 -----------ECGPFIKLSDPGIPITVLSR-QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDK  213 (262)
T ss_pred             -----------CCCceeEeCCCCCCccccCc-ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCc
Confidence                       12234789999988654332 2346788999999987 456899999999999999998 588888654


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      ...+... +...  .                                                .......+.++.+||.+
T Consensus       214 ~~~~~~~-~~~~--~------------------------------------------------~~~~~~~~~~~~~li~~  242 (262)
T cd05077         214 TLAEKER-FYEG--Q------------------------------------------------CMLVTPSCKELADLMTH  242 (262)
T ss_pred             chhHHHH-HHhc--C------------------------------------------------ccCCCCChHHHHHHHHH
Confidence            3322111 0000  0                                                00011234578999999


Q ss_pred             ccccCCCCCCCHHHHhcC
Q 013678          402 LLRYDPAERLKAREALRH  419 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~h  419 (438)
                      ||+.||.+||++.+|+++
T Consensus       243 cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         243 CMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             HcCCChhhCcCHHHHHHh
Confidence            999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=2.7e-39  Score=305.40  Aligned_cols=258  Identities=17%  Similarity=0.205  Sum_probs=183.0

Q ss_pred             cCCccCCceEEEeeeeeecceEEEEEEECCC---CcEEEEEEeecchhhH--HH-H------HHHHHHHHHHHhcCCCCc
Q 013678           86 IGENLTPRCKILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSINKYR--EA-A------MIEIDVLQRLARHDIGGT  153 (438)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~--~~-~------~~E~~~l~~l~~~~i~~~  153 (438)
                      +.+...++|++.+.||+|+||.||+|.+..+   +..+|+|+........  +. .      ..++..+.  .+.++.|+
T Consensus         6 ~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~--~~~~~~h~   83 (294)
T PHA02882          6 LIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWK--NIHNIDHL   83 (294)
T ss_pred             eeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHH--HhccCCCC
Confidence            4556678999999999999999999998877   6677888654222110  00 0      11111111  22344566


Q ss_pred             ceEEecceeccCC----eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 013678          154 RCVQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  229 (438)
Q Consensus       154 ~iv~~~~~~~~~~----~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  229 (438)
                      +++++++......    ..+++|+++..++.+.+....  ..++..++.++.|++.||+|||+++|+||||||+|||++.
T Consensus        84 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~  161 (294)
T PHA02882         84 GIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDG  161 (294)
T ss_pred             CCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence            6688887654432    568899999778888876543  4678889999999999999999999999999999999976


Q ss_pred             CcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccC----------CCCcccccCCCcchhHHHhCCCCCcch
Q 013678          230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH----------QDHSYVVSTRHYRAPEVILGLGWNYPC  299 (438)
Q Consensus       230 ~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~  299 (438)
                      ++.                           ++|+|||+|+...          .......||+.|+|||++.+..++.++
T Consensus       162 ~~~---------------------------~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~  214 (294)
T PHA02882        162 NNR---------------------------GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRG  214 (294)
T ss_pred             CCc---------------------------EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHH
Confidence            654                           5566666554321          111224699999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH-HhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHh
Q 013678          300 DLWSVGCILVELCSGEALFQTHENLE-HLAMMER-VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL  377 (438)
Q Consensus       300 DiwSlG~il~elltg~~pf~~~~~~~-~~~~i~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (438)
                      |||||||++|||++|..||.+..... ....... ....+                                        
T Consensus       215 DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~----------------------------------------  254 (294)
T PHA02882        215 DLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRL----------------------------------------  254 (294)
T ss_pred             HHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHh----------------------------------------
Confidence            99999999999999999998763322 2211110 00000                                        


Q ss_pred             ccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       378 ~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                       ....   ......+..+.++++.|+..+|++||++.++++
T Consensus       255 -~~~~---~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        255 -HEGK---IKIKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             -hhhh---hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence             0000   011234678999999999999999999999875

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.2e-39  Score=306.27  Aligned_cols=260  Identities=22%  Similarity=0.357  Sum_probs=191.2

Q ss_pred             ceEEEeeeeeecceEEEEEEE----CCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC-
Q 013678           93 RCKILSKMGEGTFGQVVECFD----NEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-  165 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~----~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~-  165 (438)
                      -|++++.||+|+||.||+|..    ..++..||+|.++..  ......+.+|+.+++.+.|+|+     +++++++... 
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   79 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI-----VKYKGICTEDG   79 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCe-----eeeeeEEecCC
Confidence            468999999999999999974    457889999998643  2334678899999999988877     9999988764 


Q ss_pred             -CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          166 -NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       166 -~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                       ...++||||+ +++|.+++.+.. ..+++..+..++.||+.||+|||++||+||||||+||+++.++.           
T Consensus        80 ~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~-----------  147 (284)
T cd05079          80 GNGIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ-----------  147 (284)
T ss_pred             CCceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCC-----------
Confidence             5789999999 999999997653 35899999999999999999999999999999999999977664           


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                      ++|+|||++.......      ....++..|+|||.+.+..++.++|||||||++|+|+++..|
T Consensus       148 ----------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~  211 (284)
T cd05079         148 ----------------VKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDS  211 (284)
T ss_pred             ----------------EEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCC
Confidence                            5555555554332211      123567789999999988899999999999999999998776


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      +.....     ......++.+.....                            ......... .........++..+.+
T Consensus       212 ~~~~~~-----~~~~~~~~~~~~~~~----------------------------~~~~~~~~~-~~~~~~~~~~~~~~~~  257 (284)
T cd05079         212 ESSPMT-----LFLKMIGPTHGQMTV----------------------------TRLVRVLEE-GKRLPRPPNCPEEVYQ  257 (284)
T ss_pred             Cccccc-----hhhhhcccccccccH----------------------------HHHHHHHHc-CccCCCCCCCCHHHHH
Confidence            533211     011111111100000                            000000000 0001122346779999


Q ss_pred             HHHHccccCCCCCCCHHHHhcC
Q 013678          398 LLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      ||.+||+.||++|||+.+++++
T Consensus       258 li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         258 LMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             HHHHHccCCcccCcCHHHHHHH
Confidence            9999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.8e-39  Score=303.48  Aligned_cols=243  Identities=22%  Similarity=0.310  Sum_probs=186.6

Q ss_pred             eeeeecceEEEEEEECCC------------------------CcEEEEEEeecchh-hHHHHHHHHHHHHHHHhcCCCCc
Q 013678           99 KMGEGTFGQVVECFDNEK------------------------KELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGT  153 (438)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~------------------------~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~  153 (438)
                      +||+|+||.||+|....+                        ...||+|++..... ....+.+|+.+++.++|+|+   
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~ni---   78 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHL---   78 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCe---
Confidence            689999999999974321                        24588998864332 33566778888888888777   


Q ss_pred             ceEEecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcc
Q 013678          154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY  232 (438)
Q Consensus       154 ~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~  232 (438)
                        +++++++......++||||+ +++|..++.... ..+++..+..++.||+.||+|||++||+||||||+|||++..+.
T Consensus        79 --v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~  155 (274)
T cd05076          79 --AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGL  155 (274)
T ss_pred             --eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCc
Confidence              99999999999999999999 999999887543 46899999999999999999999999999999999999976542


Q ss_pred             cccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHH
Q 013678          233 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVEL  311 (438)
Q Consensus       233 ~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el  311 (438)
                      ..                    .....++++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||+
T Consensus       156 ~~--------------------~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el  214 (274)
T cd05076         156 AE--------------------GTSPFIKLSDPGVSFTALSR-EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI  214 (274)
T ss_pred             cc--------------------CccceeeecCCccccccccc-cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHH
Confidence            11                    12235799999987543222 22367888999998876 4589999999999999998


Q ss_pred             H-hCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC
Q 013678          312 C-SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  390 (438)
Q Consensus       312 l-tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (438)
                      + +|..||......+....+... .                                                  ..+..
T Consensus       215 ~~~g~~p~~~~~~~~~~~~~~~~-~--------------------------------------------------~~~~~  243 (274)
T cd05076         215 CFDGEVPLKERTPSEKERFYEKK-H--------------------------------------------------RLPEP  243 (274)
T ss_pred             HhCCCCCccccChHHHHHHHHhc-c--------------------------------------------------CCCCC
Confidence            5 699999765443322111100 0                                                  00112


Q ss_pred             chhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          391 SAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       391 ~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      .+..+.++|.+||+.||++|||+.++|++
T Consensus       244 ~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         244 SCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             CChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            24578999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.3e-39  Score=301.77  Aligned_cols=245  Identities=21%  Similarity=0.294  Sum_probs=194.1

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCc----EEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      ..+|++.+.||+|+||.||+|.+..+++    .||+|.+....  .....+.+|+.+++.+.|+|+     +++++++..
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~   80 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHV-----VRLLGICLS   80 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEec
Confidence            3678999999999999999999876664    58999886543  344677889999999988877     999998877


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                       ...++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.           
T Consensus        81 -~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~-----------  147 (279)
T cd05057          81 -SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQH-----------  147 (279)
T ss_pred             -CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCe-----------
Confidence             7899999999 999999998754 35899999999999999999999999999999999999976664           


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCCCcc-----cccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY-----VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEAL  317 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~p  317 (438)
                                      ++|+|||.+.........     ..++..|+|||.+....++.++|||||||++||+++ |..|
T Consensus       148 ----------------~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p  211 (279)
T cd05057         148 ----------------VKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKP  211 (279)
T ss_pred             ----------------EEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCC
Confidence                            555666655443222111     123567999999988889999999999999999998 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+....+....+.... ..                                                ..+...+..+.+
T Consensus       212 ~~~~~~~~~~~~~~~~~-~~------------------------------------------------~~~~~~~~~~~~  242 (279)
T cd05057         212 YEGIPAVEIPDLLEKGE-RL------------------------------------------------PQPPICTIDVYM  242 (279)
T ss_pred             CCCCCHHHHHHHHhCCC-CC------------------------------------------------CCCCCCCHHHHH
Confidence            98766554433332110 00                                                011224557899


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 013678          398 LLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ++.+||..||++|||+.++++
T Consensus       243 ~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         243 VLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             HHHHHcCCChhhCCCHHHHHH
Confidence            999999999999999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=3.7e-39  Score=300.68  Aligned_cols=245  Identities=24%  Similarity=0.323  Sum_probs=193.5

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCC---CcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ..+|.+.+.||+|+||.||+|.+...   ...||||.....  ....+.+.+|+.+++.+.|+|+     +++++++.+ 
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~-   78 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHI-----VKLIGVITE-   78 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCch-----hceeEEEcC-
Confidence            35689999999999999999987544   356899988643  3345678899999999988877     999998875 


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      ...++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++|++||||||+||+++.++.            
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~------------  145 (270)
T cd05056          79 NPVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDC------------  145 (270)
T ss_pred             CCcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCC------------
Confidence            4578999999 999999997654 36899999999999999999999999999999999999977664            


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQ  319 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~  319 (438)
                                     ++|+|||++.......    ....++..|+|||.+....++.++|||||||++|++++ |..||.
T Consensus       146 ---------------~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~  210 (270)
T cd05056         146 ---------------VKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQ  210 (270)
T ss_pred             ---------------eEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCC
Confidence                           5555665554332221    11234567999999988889999999999999999986 999998


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      +.+..+....+.....                                                 ...+..++.++.++|
T Consensus       211 ~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~li  241 (270)
T cd05056         211 GVKNNDVIGRIENGER-------------------------------------------------LPMPPNCPPTLYSLM  241 (270)
T ss_pred             CCCHHHHHHHHHcCCc-------------------------------------------------CCCCCCCCHHHHHHH
Confidence            7766554433321100                                                 011234467899999


Q ss_pred             HHccccCCCCCCCHHHHhc
Q 013678          400 QGLLRYDPAERLKAREALR  418 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~  418 (438)
                      .+||..+|++|||+.++++
T Consensus       242 ~~~l~~~P~~Rpt~~~~~~  260 (270)
T cd05056         242 TKCWAYDPSKRPRFTELKA  260 (270)
T ss_pred             HHHcCCChhhCcCHHHHHH
Confidence            9999999999999999886

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=3.7e-39  Score=302.28  Aligned_cols=247  Identities=18%  Similarity=0.260  Sum_probs=194.1

Q ss_pred             CCceEEEeeeeeecceEEEEEEECC----CCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNE----KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      .++|++.+.||+|+||.||+|.+..    ++..|++|++...  ....+.+.+|+.+++.+.|+|+     +++++++..
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----~~~~~~~~~   79 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNI-----LPILHVCIE   79 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEec
Confidence            4689999999999999999999876    3578999988643  2345667889999999998888     999997654


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccC
Q 013678          165 -RNHICIVFEKL-GPSLYDFLRKNSY------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  236 (438)
Q Consensus       165 -~~~~~lv~e~~-~~~L~~~l~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~  236 (438)
                       +...++++||+ +++|.+++.....      ..+++..+..++.||+.||+|||+++++||||||+||+++.++.    
T Consensus        80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~----  155 (280)
T cd05043          80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQ----  155 (280)
T ss_pred             CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCc----
Confidence             57889999999 8999999976421      35899999999999999999999999999999999999976654    


Q ss_pred             CccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHH
Q 013678          237 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL  311 (438)
Q Consensus       237 df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  311 (438)
                                             +||+|||+++......     ....++..|+|||++.+..++.++|||||||++|++
T Consensus       156 -----------------------~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el  212 (280)
T cd05043         156 -----------------------VKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWEL  212 (280)
T ss_pred             -----------------------EEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHH
Confidence                                   5556666554322111     112456779999999988899999999999999999


Q ss_pred             Hh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC
Q 013678          312 CS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  390 (438)
Q Consensus       312 lt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (438)
                      ++ |..||...+..+....+....                       .                          ......
T Consensus       213 ~~~g~~p~~~~~~~~~~~~~~~~~-----------------------~--------------------------~~~~~~  243 (280)
T cd05043         213 MTLGQTPYVEIDPFEMAAYLKDGY-----------------------R--------------------------LAQPIN  243 (280)
T ss_pred             hcCCCCCcCcCCHHHHHHHHHcCC-----------------------C--------------------------CCCCCc
Confidence            99 999998765544332221100                       0                          001123


Q ss_pred             chhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          391 SAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       391 ~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      +++++.+++.+||..||++|||+.++++
T Consensus       244 ~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         244 CPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            4568999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=4.3e-39  Score=296.63  Aligned_cols=238  Identities=24%  Similarity=0.355  Sum_probs=188.4

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      +.||+|+||.||+|... ++..||+|+++...  .....+.+|+.+++.+.|+|+     +++++++...+..++||||+
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv~e~~   74 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNI-----VKLIGVCTQRQPIYIVMELV   74 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCc-----CeEEEEEecCCccEEEEECC
Confidence            36899999999999864 67889999986532  334567889999999988877     99999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCC
Q 013678          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  254 (438)
Q Consensus       176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~  254 (438)
                       +++|.+++.... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.                      
T Consensus        75 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~----------------------  131 (250)
T cd05085          75 PGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNV----------------------  131 (250)
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCe----------------------
Confidence             999999987644 45889999999999999999999999999999999999977664                      


Q ss_pred             CCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 013678          255 PKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM  329 (438)
Q Consensus       255 ~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~  329 (438)
                           ++|+|||++.......    ....++..|+|||++.+..++.++|||||||++|++++ |..||.+.........
T Consensus       132 -----~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~  206 (250)
T cd05085         132 -----LKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQ  206 (250)
T ss_pred             -----EEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence                 5555555554322111    11233567999999988889999999999999999998 9999987655443332


Q ss_pred             HHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCC
Q 013678          330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  409 (438)
Q Consensus       330 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  409 (438)
                      +....                       +                          ......++..+.+|+.+||..||++
T Consensus       207 ~~~~~-----------------------~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~  237 (250)
T cd05085         207 VEKGY-----------------------R--------------------------MSCPQKCPDDVYKVMQRCWDYKPEN  237 (250)
T ss_pred             HHcCC-----------------------C--------------------------CCCCCCCCHHHHHHHHHHcccCccc
Confidence            22110                       0                          0112234678999999999999999


Q ss_pred             CCCHHHHhc
Q 013678          410 RLKAREALR  418 (438)
Q Consensus       410 Rpta~ell~  418 (438)
                      |||+.|+++
T Consensus       238 Rp~~~~l~~  246 (250)
T cd05085         238 RPKFSELQK  246 (250)
T ss_pred             CCCHHHHHH
Confidence            999999976

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.4e-40  Score=315.95  Aligned_cols=280  Identities=25%  Similarity=0.391  Sum_probs=213.3

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      -|..++.||-|+||+|.+++..+|...||+|.+++.+-    .......|..||..-..+-+     |+||-.|++.+.+
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WV-----VrLyySFQDkdnL  704 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWV-----VRLYYSFQDKDNL  704 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcce-----EEEEEEeccCCce
Confidence            37888999999999999999999999999999876432    23345668888887766555     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc--CC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR--SS  245 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~--~~  245 (438)
                      |+||+|+ ||++..+|.+.+  .|.++.++.|+..+..|+++.|..|+|||||||+||||+.+|++||+||||+--  ..
T Consensus       705 YFVMdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT  782 (1034)
T KOG0608|consen  705 YFVMDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT  782 (1034)
T ss_pred             EEEEeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceec
Confidence            9999999 999999998876  899999999999999999999999999999999999999999999999999652  33


Q ss_pred             CCCCcccCCCCC------CCeEEecCCCCcc-c-------C--CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHH
Q 013678          246 KDGSYFKNLPKS------SAIKLIDFGSTTF-E-------H--QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  309 (438)
Q Consensus       246 ~~~~~~~~~~~~------~~~kl~Dfg~a~~-~-------~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  309 (438)
                      .+..++...+..      ..--.+|.+-+.. +       +  ......+||+.|+|||++....|+..+|+||.|||||
T Consensus       783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~  862 (1034)
T KOG0608|consen  783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY  862 (1034)
T ss_pred             cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence            334333321110      0011122221100 0       0  0112368999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccC
Q 013678          310 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD  389 (438)
Q Consensus       310 elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (438)
                      ||+.|++||......+....+..                            |..                  .+......
T Consensus       863 em~~g~~pf~~~tp~~tq~kv~n----------------------------w~~------------------~l~~~~~~  896 (1034)
T KOG0608|consen  863 EMLVGQPPFLADTPGETQYKVIN----------------------------WRN------------------FLHIPYQG  896 (1034)
T ss_pred             HHhhCCCCccCCCCCcceeeeee----------------------------hhh------------------cccccccc
Confidence            99999999976654433222211                            110                  01112234


Q ss_pred             CchhHHHHHHHHccccCCCCCCC---HHHHhcCCCCCCCC
Q 013678          390 HSAGDLIDLLQGLLRYDPAERLK---AREALRHPFFTRDV  426 (438)
Q Consensus       390 ~~~~~l~~ll~~~L~~dP~~Rpt---a~ell~hp~f~~~~  426 (438)
                      +++.++.+||.+ |..++++|+.   ++||.+||||+.-.
T Consensus       897 ~ls~e~~~li~k-Lc~sad~RLGkng~d~vKaHpfFkgID  935 (1034)
T KOG0608|consen  897 NLSKEALDLIQK-LCCSADSRLGKNGADQVKAHPFFKGID  935 (1034)
T ss_pred             ccCHHHHHHHHH-HhcChhhhhcccchhhhhcCccccccc
Confidence            668899999998 4568889984   78899999998753

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=2.5e-39  Score=301.58  Aligned_cols=245  Identities=20%  Similarity=0.326  Sum_probs=192.6

Q ss_pred             eeeeeecceEEEEEEECCCC------cEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           98 SKMGEGTFGQVVECFDNEKK------ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +.||+|+||.||+|++....      +.||+|.+....  .....+.+|+.+++.+.|+++     +++++++...+..+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~   75 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNI-----VKLLGVCLLNEPQY   75 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCe-----eeEeeeecCCCCeE
Confidence            36899999999999876543      679999886533  345678889999999988877     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          170 IVFEKL-GPSLYDFLRKNS-----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      +||||+ +++|.+++....     ...+++..+..++.||+.||+|||+++++|+||||+||+++.++.           
T Consensus        76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~-----------  144 (269)
T cd05044          76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGY-----------  144 (269)
T ss_pred             EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCC-----------
Confidence            999999 999999997532     234788999999999999999999999999999999999976541           


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEAL  317 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~p  317 (438)
                                 +....++|+|||++.......     ....++..|+|||.+.+..++.++|||||||++|+|++ |..|
T Consensus       145 -----------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p  213 (269)
T cd05044         145 -----------DADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP  213 (269)
T ss_pred             -----------CCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCC
Confidence                       122357777777765432211     12245678999999998889999999999999999998 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |...+..+....+....                                                 ........+..+.+
T Consensus       214 ~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~~  244 (269)
T cd05044         214 YPALNNQEVLQHVTAGG-------------------------------------------------RLQKPENCPDKIYQ  244 (269)
T ss_pred             CcccCHHHHHHHHhcCC-------------------------------------------------ccCCcccchHHHHH
Confidence            98766554433321100                                                 00112234678899


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 013678          398 LLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ||.+||..+|++||+++++++
T Consensus       245 li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         245 LMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             HHHHHcCCCcccCCCHHHHHH
Confidence            999999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-40  Score=324.41  Aligned_cols=258  Identities=25%  Similarity=0.423  Sum_probs=218.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc-----C
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-----R  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-----~  165 (438)
                      ++.|++.+.||.|.+|.||+++++.+++.+|+|++.......++...|.++|+.+.|+    +|++.++++|..     +
T Consensus        18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~h----pnv~~fyg~~~k~~~~~~   93 (953)
T KOG0587|consen   18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHH----PNVATFYGAFIKKDPGNG   93 (953)
T ss_pred             CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCC----CCcceEEEEEEEecCCCC
Confidence            3567999999999999999999999999999999988777788888999999988654    666999998863     5


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +++||||||| |||.-|+++...+..+.|..+..|++.++.||.+||.+.++|||||-.|||++.+|             
T Consensus        94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~-------------  160 (953)
T KOG0587|consen   94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENA-------------  160 (953)
T ss_pred             CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccC-------------
Confidence            6899999999 99999999877678899999999999999999999999999999999999997766             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-----CCCcchhHHHHHHHHHHHHhCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-----GWNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlG~il~elltg~~  316 (438)
                                    .+||+|||.+......   ..+.+||+.|||||++...     .|+..+|+||||++..||..|.+
T Consensus       161 --------------~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~P  226 (953)
T KOG0587|consen  161 --------------EVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAP  226 (953)
T ss_pred             --------------cEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCC
Confidence                          6788888887665433   3457999999999999754     37789999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      |+-+......+..|                                               .+.+......+..++.++.
T Consensus       227 Pl~DmHPmraLF~I-----------------------------------------------pRNPPPkLkrp~kWs~~Fn  259 (953)
T KOG0587|consen  227 PLCDMHPMRALFLI-----------------------------------------------PRNPPPKLKRPKKWSKKFN  259 (953)
T ss_pred             CccCcchhhhhccC-----------------------------------------------CCCCCccccchhhHHHHHH
Confidence            99765443332222                                               2233333344556688999


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +||..||..|-.+||+..++|+|||+++..
T Consensus       260 dFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~  289 (953)
T KOG0587|consen  260 DFISTCLVKDYEQRPSTEELLKHPFITEQP  289 (953)
T ss_pred             HHHHHHHhhccccCcchhhhccCCcccccc
Confidence            999999999999999999999999999554

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.3e-39  Score=296.84  Aligned_cols=238  Identities=24%  Similarity=0.357  Sum_probs=189.5

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      ++||.|+||.||+|.+.. ++.||+|++....  .....+.+|+.+++.+.|+++     +++++++......++||||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~v~e~~   74 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNI-----VKLIGVCVQKQPIYIVMELV   74 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCe-----EEEEEEEecCCCeEEEEEcC
Confidence            468999999999999877 8999999887533  245678889999999988877     99999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCC
Q 013678          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  254 (438)
Q Consensus       176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~  254 (438)
                       +++|.+++.... ..+++..+..++.|++.||+|||++|++||||||+||+++.++.                      
T Consensus        75 ~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~----------------------  131 (251)
T cd05041          75 PGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNV----------------------  131 (251)
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCc----------------------
Confidence             999999997643 36889999999999999999999999999999999999976664                      


Q ss_pred             CCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 013678          255 PKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA  328 (438)
Q Consensus       255 ~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~  328 (438)
                           ++|+|||.+.......     ....++..|+|||.+.+..++.++|||||||++|+|++ |..||..........
T Consensus       132 -----~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~  206 (251)
T cd05041         132 -----LKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRE  206 (251)
T ss_pred             -----EEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHH
Confidence                 5666666554332111     11123557999999988889999999999999999999 889997765443333


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+.....                                                 .......+.++.+++.+||..+|+
T Consensus       207 ~~~~~~~-------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~  237 (251)
T cd05041         207 RIESGYR-------------------------------------------------MPAPQLCPEEIYRLMLQCWAYDPE  237 (251)
T ss_pred             HHhcCCC-------------------------------------------------CCCCccCCHHHHHHHHHHhccChh
Confidence            2211100                                                 001123456899999999999999


Q ss_pred             CCCCHHHHhc
Q 013678          409 ERLKAREALR  418 (438)
Q Consensus       409 ~Rpta~ell~  418 (438)
                      +|||+.|+++
T Consensus       238 ~Rp~~~ell~  247 (251)
T cd05041         238 NRPSFSEIYN  247 (251)
T ss_pred             hCcCHHHHHH
Confidence            9999999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=6.6e-39  Score=301.21  Aligned_cols=261  Identities=24%  Similarity=0.345  Sum_probs=188.9

Q ss_pred             CceEEEeeeeeecceEEEEEE----ECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc--
Q 013678           92 PRCKILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--  164 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--  164 (438)
                      .+|++++.||+|+||.||+|.    +..+++.||+|.+.... ...+.+.+|+.++..+.|+|+     +++++++..  
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~   78 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNI-----VKYKGVCYSAG   78 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCe-----eEEEEEEccCC
Confidence            578999999999999999997    45678899999986543 334577899999999988877     999887643  


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      ...+++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.           
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~-----------  146 (284)
T cd05081          79 RRNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENR-----------  146 (284)
T ss_pred             CCceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCe-----------
Confidence            45789999999 999999997643 35899999999999999999999999999999999999977665           


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCCCc------ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                      ++|+|||++........      ...++..|+|||++.+..++.++|||||||++|||++|..+
T Consensus       147 ----------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~  210 (284)
T cd05081         147 ----------------VKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDK  210 (284)
T ss_pred             ----------------EEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCc
Confidence                            45555555543322111      11234469999999988899999999999999999998877


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      +..... .....    .+....                           .............. .........++.++.+
T Consensus       211 ~~~~~~-~~~~~----~~~~~~---------------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  257 (284)
T cd05081         211 SCSPPA-EFMRM----MGNDKQ---------------------------GQMIVYHLIELLKN-NGRLPAPPGCPAEIYA  257 (284)
T ss_pred             CCCcch-hhhhh----cccccc---------------------------cccchHHHHHHHhc-CCcCCCCCCCCHHHHH
Confidence            643221 11110    000000                           00000000000000 0001122345678999


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 013678          398 LLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ||.+||..||++|||+.|+++
T Consensus       258 li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         258 IMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             HHHHHccCChhhCCCHHHHHH
Confidence            999999999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-39  Score=305.90  Aligned_cols=256  Identities=23%  Similarity=0.315  Sum_probs=209.0

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      +.-.++..+.++||+|-||.|.+|+- ..+.+||+|+++..  ...+..+.+|+++|.+|+||||     +.++++|..+
T Consensus       534 EfPRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNI-----veLvGVC~~D  607 (807)
T KOG1094|consen  534 EFPRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNI-----VELLGVCVQD  607 (807)
T ss_pred             hcchhheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCe-----eEEEeeeecC
Confidence            33456778999999999999999985 44789999999853  3446789999999999999888     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+|+||||+ .|+|.+++.++.-..+......+|+.||+.|++||.+.++|||||.+.|+|++.++             
T Consensus       608 ePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~-------------  674 (807)
T KOG1094|consen  608 DPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEF-------------  674 (807)
T ss_pred             CchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcc-------------
Confidence            9999999999 99999999987544445566778999999999999999999999999999997655             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCCcc-----cccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh--CCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY-----VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS--GEAL  317 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt--g~~p  317 (438)
                                    .+||+|||+++.......+     .+-...|||+|.+..++++.++|+|+||+++||+++  ...|
T Consensus       675 --------------~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~P  740 (807)
T KOG1094|consen  675 --------------TIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQP  740 (807)
T ss_pred             --------------cEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCc
Confidence                          5677777777654433332     244678999999999999999999999999999875  7899


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |....+.+........+...+.                                          ......+.-++..+.+
T Consensus       741 y~~lt~e~vven~~~~~~~~~~------------------------------------------~~~l~~P~~cp~~lye  778 (807)
T KOG1094|consen  741 YSQLTDEQVVENAGEFFRDQGR------------------------------------------QVVLSRPPACPQGLYE  778 (807)
T ss_pred             hhhhhHHHHHHhhhhhcCCCCc------------------------------------------ceeccCCCcCcHHHHH
Confidence            9888887777666555433221                                          1112234456778999


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 013678          398 LLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ||.+||..|-++|||++++-.
T Consensus       779 lml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  779 LMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             HHHHHhchhhhcCCCHHHHHH
Confidence            999999999999999999854

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=9.9e-39  Score=297.60  Aligned_cols=244  Identities=19%  Similarity=0.255  Sum_probs=181.9

Q ss_pred             eeeeeecceEEEEEEECC--CCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEc
Q 013678           98 SKMGEGTFGQVVECFDNE--KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e  173 (438)
                      +.||+|+||.||+|....  ....+|+|.+....  .....+.+|+.+++.++|+|+     +++++.+......|+|||
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~ni-----i~~~~~~~~~~~~~lv~e   75 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNV-----LQCLGQCIESIPYLLVLE   75 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCc-----ceEEEEECCCCceEEEEE
Confidence            368999999999996433  34578888775432  334567789999999888877     999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          174 KL-GPSLYDFLRKNSY---RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       174 ~~-~~~L~~~l~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      |+ +++|.+++.....   ...++..+..++.||+.||+|||++||+||||||+|||++.++.                 
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~-----------------  138 (269)
T cd05042          76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLS-----------------  138 (269)
T ss_pred             eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCc-----------------
Confidence            99 9999999976431   23467888999999999999999999999999999999977664                 


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhC-------CCCCcchhHHHHHHHHHHHHh-CCC
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILG-------LGWNYPCDLWSVGCILVELCS-GEA  316 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~il~ellt-g~~  316 (438)
                                +||+|||++......     .....++..|+|||++..       ..++.++|||||||++|||++ |..
T Consensus       139 ----------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~  208 (269)
T cd05042         139 ----------VKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQ  208 (269)
T ss_pred             ----------EEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCC
Confidence                      566666655432111     112345678999999853       346789999999999999999 788


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||....+.+.+..+.....                       ..++.                     .......+..+.
T Consensus       209 p~~~~~~~~~~~~~~~~~~-----------------------~~~~~---------------------~~~~~~~~~~~~  244 (269)
T cd05042         209 PYPDLSDEQVLKQVVREQD-----------------------IKLPK---------------------PQLDLKYSDRWY  244 (269)
T ss_pred             CCCcCCHHHHHHHHhhccC-----------------------ccCCC---------------------CcccccCCHHHH
Confidence            9977665554433322110                       00000                     011224566788


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q 013678          397 DLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      +++..|+ .||++|||+++|++
T Consensus       245 ~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         245 EVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHHHHHh-cCcccccCHHHHHH
Confidence            8999998 59999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-39  Score=290.01  Aligned_cols=253  Identities=22%  Similarity=0.392  Sum_probs=199.9

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ..|.++..||+|+|+.|.+++.+.|.+.||+|++++.    ++..+-.+.|-.+..+-.    .+|.+|-++.+|+.+..
T Consensus       250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~as----n~pflvglhscfqtesr  325 (593)
T KOG0695|consen  250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS----NNPFLVGLHSCFQTESR  325 (593)
T ss_pred             ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhcc----CCCeEEehhhhhcccce
Confidence            6789999999999999999999999999999999752    233344556666665543    23556999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +++|.||+ ||+|.-.++++.  +++++.++.+...|+.||.|||++|||.||||.+|+|++..|++|++|+|+.+....
T Consensus       326 lffvieyv~ggdlmfhmqrqr--klpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~  403 (593)
T KOG0695|consen  326 LFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG  403 (593)
T ss_pred             EEEEEEEecCcceeeehhhhh--cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCC
Confidence            99999999 999988777654  899999999999999999999999999999999999998888665555555433222


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC-----
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-----  321 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~-----  321 (438)
                      +                        +...++++||+.|+|||++.+..|+..+|+|+|||+++||+.|+.||.--     
T Consensus       404 ~------------------------gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~  459 (593)
T KOG0695|consen  404 P------------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNP  459 (593)
T ss_pred             C------------------------CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCc
Confidence            2                        23445679999999999999999999999999999999999999999521     


Q ss_pred             --ChHHHH-HHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          322 --ENLEHL-AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       322 --~~~~~~-~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                        +..+.+ +.|.+..                                                  ...+...+-.+..+
T Consensus       460 d~ntedylfqvilekq--------------------------------------------------iriprslsvkas~v  489 (593)
T KOG0695|consen  460 DMNTEDYLFQVILEKQ--------------------------------------------------IRIPRSLSVKASHV  489 (593)
T ss_pred             ccchhHHHHHHHhhhc--------------------------------------------------ccccceeehhhHHH
Confidence              111111 1111111                                                  11122334466789


Q ss_pred             HHHccccCCCCCC------CHHHHhcCCCCCC
Q 013678          399 LQGLLRYDPAERL------KAREALRHPFFTR  424 (438)
Q Consensus       399 l~~~L~~dP~~Rp------ta~ell~hp~f~~  424 (438)
                      ++..|.+||.+|.      ...++..|+||+.
T Consensus       490 lkgflnkdp~erlgc~~~~g~~dik~h~ffr~  521 (593)
T KOG0695|consen  490 LKGFLNKDPKERLGCRPQTGFSDIKSHAFFRS  521 (593)
T ss_pred             HHHhhcCCcHHhcCCCcccchhhhhcchhhhh
Confidence            9999999999997      4789999999984

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=5.1e-39  Score=297.61  Aligned_cols=242  Identities=22%  Similarity=0.298  Sum_probs=189.3

Q ss_pred             eeeeeecceEEEEEEECCCC----------cEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           98 SKMGEGTFGQVVECFDNEKK----------ELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~----------~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      +.||+|+||.||+|.+..++          ..|++|++.........+.+|+.+++.+.|+++     +++++++.. ..
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~-~~   74 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHL-----VKLYGVCVR-DE   74 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcch-----hheeeEEec-CC
Confidence            46899999999999998776          358888876544446778899999999988877     999998877 77


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      .++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++..             
T Consensus        75 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~-------------  140 (259)
T cd05037          75 NIMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLN-------------  140 (259)
T ss_pred             cEEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccc-------------
Confidence            89999999 999999998754 268999999999999999999999999999999999999765411             


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCC--CCCcchhHHHHHHHHHHHHh-CCCCCCCCCh
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCS-GEALFQTHEN  323 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~ellt-g~~pf~~~~~  323 (438)
                             ......++|+|||++..... .....++..|+|||++.+.  .++.++|||||||++|+|++ |..||...+.
T Consensus       141 -------~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~  212 (259)
T cd05037         141 -------EGYVPFIKLSDPGIPITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS  212 (259)
T ss_pred             -------cCCceeEEeCCCCccccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc
Confidence                   01223588999998876544 2234677889999999877  68999999999999999999 5777865432


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      ........ ...                      .                            ........+.++|.+||
T Consensus       213 ~~~~~~~~-~~~----------------------~----------------------------~~~~~~~~~~~li~~~l  241 (259)
T cd05037         213 SEKERFYQ-DQH----------------------R----------------------------LPMPDCAELANLINQCW  241 (259)
T ss_pred             hhHHHHHh-cCC----------------------C----------------------------CCCCCchHHHHHHHHHh
Confidence            22111110 000                      0                            00011257899999999


Q ss_pred             ccCCCCCCCHHHHhc
Q 013678          404 RYDPAERLKAREALR  418 (438)
Q Consensus       404 ~~dP~~Rpta~ell~  418 (438)
                      ..||.+|||+.++++
T Consensus       242 ~~~p~~Rpt~~~il~  256 (259)
T cd05037         242 TYDPTKRPSFRAILR  256 (259)
T ss_pred             ccChhhCCCHHHHHH
Confidence            999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-39  Score=331.26  Aligned_cols=247  Identities=22%  Similarity=0.348  Sum_probs=204.7

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCC-----cEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKK-----ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      ..+-++.+.||+|.||.||.|......     ..||||.+++.  .....+|.+|..+|+.++|+||     |+++|++-
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNi-----v~liGv~l  765 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNI-----VSLIGVCL  765 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcce-----eeEEEeec
Confidence            356678899999999999999875433     24999998764  4566889999999999999988     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNS-----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      +....+|++||| ||+|..||++..     ...++..+...++.||++|+.||+++++|||||...|+|++...      
T Consensus       766 ~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r------  839 (1025)
T KOG1095|consen  766 DSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERR------  839 (1025)
T ss_pred             CCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccC------
Confidence            999999999999 999999998751     35689999999999999999999999999999999999997654      


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCccc-----ccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHH
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV-----VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC  312 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~-----~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell  312 (438)
                                           .+||+|||+|+......-+.     .-...|||||.+....++.|+|||||||+|||++
T Consensus       840 ---------------------~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEif  898 (1025)
T KOG1095|consen  840 ---------------------VVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIF  898 (1025)
T ss_pred             ---------------------cEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHH
Confidence                                 56777777776433322221     1235799999999999999999999999999999


Q ss_pred             h-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCc
Q 013678          313 S-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  391 (438)
Q Consensus       313 t-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (438)
                      + |..||.+.++.+.+....+                       ++++.                          .+..+
T Consensus       899 slG~~PY~~~~n~~v~~~~~~-----------------------ggRL~--------------------------~P~~C  929 (1025)
T KOG1095|consen  899 SLGATPYPSRSNFEVLLDVLE-----------------------GGRLD--------------------------PPSYC  929 (1025)
T ss_pred             hCCCCCCCCcchHHHHHHHHh-----------------------CCccC--------------------------CCCCC
Confidence            8 9999999888877664432                       11222                          23456


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          392 AGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       392 ~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ++.+.++|.+||+.+|++||++..|++
T Consensus       930 P~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  930 PEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             ChHHHHHHHHHccCChhhCccHHHHHh
Confidence            778999999999999999999999986

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=5e-40  Score=334.72  Aligned_cols=272  Identities=26%  Similarity=0.361  Sum_probs=194.7

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc---
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY---  164 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~---  164 (438)
                      ....|+.++.||+||||.||+++++-+|+.||||++...  ........+|+..|.+|+|+|+     |+++..+.+   
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNV-----VRYysAWVEs~~  551 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNV-----VRYYSAWVESTA  551 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcce-----eeeehhhhccCC
Confidence            345678889999999999999999999999999999754  4555678899999999999987     333321100   


Q ss_pred             --------------------------------------------------------------------------------
Q 013678          165 --------------------------------------------------------------------------------  164 (438)
Q Consensus       165 --------------------------------------------------------------------------------  164 (438)
                                                                                                      
T Consensus       552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S  631 (1351)
T KOG1035|consen  552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS  631 (1351)
T ss_pred             ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------C--------CeEEEEEccC-CCCHHHHHHhcCCCCC-CHHHHHHHHHHHHHH
Q 013678          165 ----------------------------R--------NHICIVFEKL-GPSLYDFLRKNSYRSF-PIDLVRELGRQLLES  206 (438)
Q Consensus       165 ----------------------------~--------~~~~lv~e~~-~~~L~~~l~~~~~~~l-~~~~~~~i~~qi~~a  206 (438)
                                                  +        ..+||-|||| ..+|.++++++.  .. .....+++++||+.|
T Consensus       632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~--~~~~~d~~wrLFreIlEG  709 (1351)
T KOG1035|consen  632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH--FNSQRDEAWRLFREILEG  709 (1351)
T ss_pred             cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc--cchhhHHHHHHHHHHHHH
Confidence                                        0        1369999999 666666666553  12 477899999999999


Q ss_pred             HHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC-CCcccccCCCcc
Q 013678          207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYR  285 (438)
Q Consensus       207 L~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~  285 (438)
                      |.|+|++|||||||||.||++++++.+||.|||++........       .......+.+.-.-... ..+..+||..|+
T Consensus       710 LaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~-------~~d~~~~~~~~~~g~~~~~~Ts~VGTalYv  782 (1351)
T KOG1035|consen  710 LAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLE-------SIDQDLSFSTNRAGSNDGDLTSQVGTALYV  782 (1351)
T ss_pred             HHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhh-------hHhhccCccccccCCCCcccccccceeeee
Confidence            9999999999999999999999999888888888765321110       00111111111111111 334569999999


Q ss_pred             hhHHHhCCC---CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-hCCCChHHHHHHhhhhhhhhcCCCcccC
Q 013678          286 APEVILGLG---WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV-LGPLPHHMVIRADRRAEKYFRRGARLDW  361 (438)
Q Consensus       286 aPE~~~~~~---~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~  361 (438)
                      |||++.+..   |+.|+||||||+||+||+.   ||...  .+-...+..+ -|.+|..                     
T Consensus       783 APEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts--MERa~iL~~LR~g~iP~~---------------------  836 (1351)
T KOG1035|consen  783 APELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTS--MERASILTNLRKGSIPEP---------------------  836 (1351)
T ss_pred             cHHHhcccccccccchhhhHHHHHHHHHHhc---cCCch--HHHHHHHHhcccCCCCCC---------------------
Confidence            999998765   9999999999999999984   46432  2222222211 2333321                     


Q ss_pred             CCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          362 PDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                                             .......-+.-..+|++||+.||++||||.|+|++.||--
T Consensus       837 -----------------------~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp  876 (1351)
T KOG1035|consen  837 -----------------------ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP  876 (1351)
T ss_pred             -----------------------cccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence                                   0001111234568999999999999999999999999974

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=1.6e-38  Score=294.94  Aligned_cols=239  Identities=17%  Similarity=0.252  Sum_probs=181.3

Q ss_pred             eeeeeecceEEEEEEECC---CCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec-cCCeEEEE
Q 013678           98 SKMGEGTFGQVVECFDNE---KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD-YRNHICIV  171 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~-~~~~~~lv  171 (438)
                      +.||+|+||.||+|.+..   .+..||+|.+...  ....+.+.+|+.+++.++|+|+     +++++++. .++..++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~~lv   75 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNV-----LSLLGICLPSEGSPLVV   75 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCc-----ceEEEEeecCCCCcEEE
Confidence            468999999999998653   3457999988542  2345677889999999988887     99999654 45678999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||+ +++|.+++.... ..+++..+..++.||+.||.|||+.+|+||||||+|||++.++.                  
T Consensus        76 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~------------------  136 (262)
T cd05058          76 LPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFT------------------  136 (262)
T ss_pred             EecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCc------------------
Confidence            9999 999999997654 35678888999999999999999999999999999999977664                  


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCC-------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCC
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHE  322 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~  322 (438)
                               +||+|||++......       .....++..|+|||.+.+..++.++|||||||++|||++ |.+||...+
T Consensus       137 ---------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~  207 (262)
T cd05058         137 ---------VKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD  207 (262)
T ss_pred             ---------EEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence                     555555555432211       112245678999999988889999999999999999999 466776554


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ..+....+...  ..                                               .......+..+.+++.+|
T Consensus       208 ~~~~~~~~~~~--~~-----------------------------------------------~~~~~~~~~~~~~li~~c  238 (262)
T cd05058         208 SFDITVYLLQG--RR-----------------------------------------------LLQPEYCPDPLYEVMLSC  238 (262)
T ss_pred             HHHHHHHHhcC--CC-----------------------------------------------CCCCCcCCHHHHHHHHHH
Confidence            43332222110  00                                               001123356889999999


Q ss_pred             cccCCCCCCCHHHHhc
Q 013678          403 LRYDPAERLKAREALR  418 (438)
Q Consensus       403 L~~dP~~Rpta~ell~  418 (438)
                      |..+|++||++.++++
T Consensus       239 l~~~p~~Rp~~~~il~  254 (262)
T cd05058         239 WHPKPEMRPTFSELVS  254 (262)
T ss_pred             cCCChhhCCCHHHHHH
Confidence            9999999999999986

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.6e-41  Score=307.11  Aligned_cols=270  Identities=24%  Similarity=0.425  Sum_probs=213.7

Q ss_pred             ecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--------hhHHHHHHHHHHHHHHHhcCCCCcceE
Q 013678           85 AIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--------KYREAAMIEIDVLQRLARHDIGGTRCV  156 (438)
Q Consensus        85 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~E~~~l~~l~~~~i~~~~iv  156 (438)
                      .-...+.+||-+++.||+|||+.||+|.|....+.||+|+-..+.        ...+.+.+|..|.+.|.|+.|     |
T Consensus       456 kDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRI-----V  530 (775)
T KOG1151|consen  456 KDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRI-----V  530 (775)
T ss_pred             ccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCccee-----e
Confidence            334467899999999999999999999999999999999864322        223556789999999888777     9


Q ss_pred             Eecceec-cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEecCcc
Q 013678          157 QIRNWFD-YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEY  232 (438)
Q Consensus       157 ~~~~~~~-~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~  232 (438)
                      ++|++|. +.+.+|-|+||| |.+|.-+|+.+.  .+++.+++.|+.||+.||.||.+..  |||-||||.|||+.+.. 
T Consensus       531 KlYDyfslDtdsFCTVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gt-  607 (775)
T KOG1151|consen  531 KLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGT-  607 (775)
T ss_pred             eeeeeeeeccccceeeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCc-
Confidence            9999997 456899999999 889998988765  8999999999999999999999865  99999999999996532 


Q ss_pred             cccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC----------cccccCCCcchhHHHhCC----CCCcc
Q 013678          233 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----------SYVVSTRHYRAPEVILGL----GWNYP  298 (438)
Q Consensus       233 ~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~~----~~~~~  298 (438)
                                             .-+.+||.|||++.+++...          +...||.+|++||.+.-.    ..+.+
T Consensus       608 -----------------------acGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnK  664 (775)
T KOG1151|consen  608 -----------------------ACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNK  664 (775)
T ss_pred             -----------------------ccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccc
Confidence                                   34568888888888765432          225789999999988644    37899


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhc
Q 013678          299 CDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL  378 (438)
Q Consensus       299 ~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (438)
                      +||||+|||+|..+.|+.||...-..+.+..-..++.                                           
T Consensus       665 VDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlk-------------------------------------------  701 (775)
T KOG1151|consen  665 VDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILK-------------------------------------------  701 (775)
T ss_pred             eeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhc-------------------------------------------
Confidence            9999999999999999999976543332221111110                                           


Q ss_pred             cchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       379 ~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                       ......+.-+.++.++.+||++||++.-++|....++..||||.-..++.
T Consensus       702 -AtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~rrs  751 (775)
T KOG1151|consen  702 -ATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHIRRS  751 (775)
T ss_pred             -ceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccchhhhc
Confidence             00111112235678999999999999999999999999999998765553

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=1.4e-38  Score=301.80  Aligned_cols=245  Identities=22%  Similarity=0.274  Sum_probs=190.7

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCc----EEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+|++.+.||+|+||.||+|.+..+++    .||+|.+....  .....+.+|+.++..+.|+|+     +++++++...
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~ni-----v~~~~~~~~~   81 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL-----VRLLGVCLSP   81 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCc-----ccEEEEEcCC
Confidence            578899999999999999999877775    47888876432  223467789999999988887     9999988654


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                       ..++++||+ +|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++             
T Consensus        82 -~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~-------------  146 (303)
T cd05110          82 -TIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPN-------------  146 (303)
T ss_pred             -CceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCC-------------
Confidence             577999999 899999987654 3589999999999999999999999999999999999997655             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALF  318 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf  318 (438)
                                    .+||+|||++.......     ....++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus       147 --------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~  212 (303)
T cd05110         147 --------------HVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY  212 (303)
T ss_pred             --------------ceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCC
Confidence                          45666666665432211     11245678999999998889999999999999999997 99999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      .+....+....+.. ...+                                                ......+.++.++
T Consensus       213 ~~~~~~~~~~~~~~-~~~~------------------------------------------------~~~~~~~~~~~~l  243 (303)
T cd05110         213 DGIPTREIPDLLEK-GERL------------------------------------------------PQPPICTIDVYMV  243 (303)
T ss_pred             CCCCHHHHHHHHHC-CCCC------------------------------------------------CCCCCCCHHHHHH
Confidence            76544332222211 0000                                                0112235578999


Q ss_pred             HHHccccCCCCCCCHHHHhcC
Q 013678          399 LQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~h  419 (438)
                      +.+||..||++||++.++++.
T Consensus       244 i~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         244 MVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             HHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999998874

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=1.8e-38  Score=295.84  Aligned_cols=247  Identities=21%  Similarity=0.398  Sum_probs=192.7

Q ss_pred             ceEEEeeeeeecceEEEEEEECC-CCcEEEEEEeecc-----------hhhHHHHHHHHHHHHH-HHhcCCCCcceEEec
Q 013678           93 RCKILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSI-----------NKYREAAMIEIDVLQR-LARHDIGGTRCVQIR  159 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~-----------~~~~~~~~~E~~~l~~-l~~~~i~~~~iv~~~  159 (438)
                      .|++.+.||+|+||.||+|.+.. +++.+|+|.+...           ......+..|+.++.. ++|+|+     ++++
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----~~~~   75 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNI-----VRYY   75 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCe-----eeEE
Confidence            37889999999999999999887 6788999987532           1122445667777664 566655     9999


Q ss_pred             ceeccCCeEEEEEccC-CCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCccccc
Q 013678          160 NWFDYRNHICIVFEKL-GPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKV  235 (438)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~kl  235 (438)
                      +++..++..++||||+ +++|.+++..  .....+++..++.++.|++.||.|||+ .||+|+||||+||+++.++    
T Consensus        76 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~----  151 (269)
T cd08528          76 KTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDD----  151 (269)
T ss_pred             eeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCC----
Confidence            9999999999999999 8999998853  223468999999999999999999996 7899999999999997655    


Q ss_pred             CCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh
Q 013678          236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  313 (438)
Q Consensus       236 ~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt  313 (438)
                                             .++|+|||.+......  .....|+..|+|||.+.+..++.++||||||+++|+|++
T Consensus       152 -----------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~  208 (269)
T cd08528         152 -----------------------KVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCT  208 (269)
T ss_pred             -----------------------cEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHh
Confidence                                   5677777766554332  123468889999999998889999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchh
Q 013678          314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  393 (438)
Q Consensus       314 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (438)
                      |..||...+.......+......+                                                .....++.
T Consensus       209 g~~p~~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~  240 (269)
T cd08528         209 LQPPFYSTNMLSLATKIVEAVYEP------------------------------------------------LPEGMYSE  240 (269)
T ss_pred             CCCcccccCHHHHHHHHhhccCCc------------------------------------------------CCcccCCH
Confidence            999997655444333322211000                                                00113456


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      ++.++|.+||+.||++||++.|+.++
T Consensus       241 ~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         241 DVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             HHHHHHHHHCCCCCccCCCHHHHHHH
Confidence            89999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=2.4e-38  Score=295.10  Aligned_cols=244  Identities=19%  Similarity=0.236  Sum_probs=181.6

Q ss_pred             eeeeeecceEEEEEEEC--CCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEc
Q 013678           98 SKMGEGTFGQVVECFDN--EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e  173 (438)
                      +.||+|+||.||+|...  .++..+|+|.++...  .....+.+|+.+++.++|+|+     +++++++.+...+++|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~lv~e   75 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNL-----LQCLGQCTEVTPYLLVME   75 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEcCCCCcEEEEE
Confidence            36899999999999754  355679999886533  233567889999999988877     999999999899999999


Q ss_pred             cC-CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          174 KL-GPSLYDFLRKNS---YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       174 ~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      |+ +++|.+++....   ....++..++.++.|++.||+|||++|++||||||+||+++.++.                 
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~-----------------  138 (269)
T cd05087          76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLT-----------------  138 (269)
T ss_pred             CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCc-----------------
Confidence            99 899999997532   124567788899999999999999999999999999999976654                 


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCC-------CCCcchhHHHHHHHHHHHHh-CCC
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGL-------GWNYPCDLWSVGCILVELCS-GEA  316 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~-------~~~~~~DiwSlG~il~ellt-g~~  316 (438)
                                ++|+|||.+......     .....++..|+|||++.+.       .++.++|||||||++|||++ |..
T Consensus       139 ----------~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~  208 (269)
T cd05087         139 ----------VKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQ  208 (269)
T ss_pred             ----------EEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCC
Confidence                      555555555432211     1123567889999998643       35789999999999999996 999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||......+.........                       ....+.                     .......+..+.
T Consensus       209 p~~~~~~~~~~~~~~~~~-----------------------~~~~~~---------------------~~~~~~~~~~~~  244 (269)
T cd05087         209 PYRHLSDEQVLTYTVREQ-----------------------QLKLPK---------------------PRLKLPLSDRWY  244 (269)
T ss_pred             CCCCCChHHHHHHHhhcc-----------------------cCCCCC---------------------CccCCCCChHHH
Confidence            997765544322211100                       000000                     001112355788


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q 013678          397 DLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      +++.+|+ .+|++|||++||+.
T Consensus       245 ~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         245 EVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             HHHHHHh-cCcccCCCHHHHHH
Confidence            9999998 68999999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.8e-38  Score=298.02  Aligned_cols=260  Identities=23%  Similarity=0.354  Sum_probs=193.7

Q ss_pred             CceEEEeeeeeecceEEEEEEEC----CCCcEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCcceEEecceecc-
Q 013678           92 PRCKILSKMGEGTFGQVVECFDN----EKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-  164 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-  164 (438)
                      ..|++.+.||+|+||.||+|...    .+++.||||+++....  ..+.+.+|+.+++.+.|+++     +++++++.. 
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i-----~~~~~~~~~~   78 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENI-----VKYKGVCEKP   78 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCCh-----heEEeeeecC
Confidence            46788999999999999999864    3478999999976544  36778999999999998877     999998876 


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          165 -RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       165 -~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                       +...++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+|+||||+||+++.++           
T Consensus        79 ~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~-----------  146 (284)
T cd05038          79 GGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESED-----------  146 (284)
T ss_pred             CCCceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC-----------
Confidence             56899999999 899999997654 3589999999999999999999999999999999999997655           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCCCc------ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~  316 (438)
                                      .++|+|||.+........      ...++..|+|||.+.+..++.++|||||||++|+|++|..
T Consensus       147 ----------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~  210 (284)
T cd05038         147 ----------------LVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGD  210 (284)
T ss_pred             ----------------CEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCC
Confidence                            466666666655432211      1234557999999988889999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||........     ...+..+.                            ............ ..........++.++.
T Consensus       211 p~~~~~~~~~-----~~~~~~~~----------------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  256 (284)
T cd05038         211 PSQSPPAEFL-----RMIGIAQG----------------------------QMIVTRLLELLK-EGERLPRPPSCPDEVY  256 (284)
T ss_pred             Ccccccchhc-----cccccccc----------------------------cccHHHHHHHHH-cCCcCCCCccCCHHHH
Confidence            9865322110     00000000                            000000000000 0000111223456899


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q 013678          397 DLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      +|+.+||+.||++|||+.|+++
T Consensus       257 ~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         257 DLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             HHHHHHhccChhhCCCHHHHHH
Confidence            9999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=100.00  E-value=3.6e-38  Score=312.05  Aligned_cols=271  Identities=22%  Similarity=0.362  Sum_probs=189.9

Q ss_pred             CCceEEEeeeeeecceEEEEEEEC----------------CCCcEEEEEEeecchh-h--------------HHHHHHHH
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDN----------------EKKELVAIKIVRSINK-Y--------------REAAMIEI  139 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~----------------~~~~~vaiK~~~~~~~-~--------------~~~~~~E~  139 (438)
                      .++|++.++||+|+||.||+|.+.                ..++.||||.+..... .              .+....|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            468999999999999999999752                2456799999864221 1              12334578


Q ss_pred             HHHHHHHhcCCCCcceEEecceecc--------CCeEEEEEccC-CCCHHHHHHhcCC----------------------
Q 013678          140 DVLQRLARHDIGGTRCVQIRNWFDY--------RNHICIVFEKL-GPSLYDFLRKNSY----------------------  188 (438)
Q Consensus       140 ~~l~~l~~~~i~~~~iv~~~~~~~~--------~~~~~lv~e~~-~~~L~~~l~~~~~----------------------  188 (438)
                      .++.++.|.++.+.+++++++++..        .+..+|||||+ +++|.+++.....                      
T Consensus       224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~  303 (507)
T PLN03224        224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ  303 (507)
T ss_pred             HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence            8888898888877888888888753        35689999999 9999999864210                      


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCC
Q 013678          189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST  268 (438)
Q Consensus       189 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a  268 (438)
                      ..+++..++.++.|++.||.|||+++|+||||||+|||++.++                           .++|+|||++
T Consensus       304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~---------------------------~~kL~DFGla  356 (507)
T PLN03224        304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDG---------------------------QVKIIDFGAA  356 (507)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCC---------------------------cEEEEeCcCc
Confidence            1245678899999999999999999999999999999997655                           4677777766


Q ss_pred             cccCCCC----cccccCCCcchhHHHhCCC--------------------C--CcchhHHHHHHHHHHHHhCCC-CCCCC
Q 013678          269 TFEHQDH----SYVVSTRHYRAPEVILGLG--------------------W--NYPCDLWSVGCILVELCSGEA-LFQTH  321 (438)
Q Consensus       269 ~~~~~~~----~~~~gt~~y~aPE~~~~~~--------------------~--~~~~DiwSlG~il~elltg~~-pf~~~  321 (438)
                      .......    ....+|+.|+|||.+....                    +  ..+.||||+||++|+|++|.. ||...
T Consensus       357 ~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~  436 (507)
T PLN03224        357 VDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANI  436 (507)
T ss_pred             cccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccch
Confidence            5432211    1124478999999986432                    1  134799999999999999875 77543


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      ......  +... ...                                  ...|+............+..++...||+.+
T Consensus       437 ~~f~~~--~~~~-~~~----------------------------------~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~  479 (507)
T PLN03224        437 RLFNTE--LRQY-DND----------------------------------LNRWRMYKGQKYDFSLLDRNKEAGWDLACK  479 (507)
T ss_pred             hhhhhH--Hhhc-cch----------------------------------HHHHHhhcccCCCcccccccChHHHHHHHH
Confidence            221110  0000 000                                  000000000011112234567889999999


Q ss_pred             ccccCC---CCCCCHHHHhcCCCCCCC
Q 013678          402 LLRYDP---AERLKAREALRHPFFTRD  425 (438)
Q Consensus       402 ~L~~dP---~~Rpta~ell~hp~f~~~  425 (438)
                      ||..+|   .+|+|++|+|+||||..+
T Consensus       480 LL~~~~~~~~~RlSa~eaL~Hp~f~~~  506 (507)
T PLN03224        480 LITKRDQANRGRLSVGQALSHRFFLPE  506 (507)
T ss_pred             HhccCCCCcccCCCHHHHhCCCCcCCC
Confidence            999876   689999999999999764

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-40  Score=287.20  Aligned_cols=265  Identities=23%  Similarity=0.373  Sum_probs=204.5

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ++.+-+..||.|+||+|++..++.+|+..|||.++..+  ....++..|.+...+-.  +  .++||+++|..-.++..|
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~--~--cp~IVkfyGa~F~EGdcW  139 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSS--N--CPNIVKFYGALFSEGDCW  139 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhc--C--CcHHHHHhhhhhcCCcee
Confidence            34466788999999999999999999999999998644  44566677777654432  2  267799999999999999


Q ss_pred             EEEccCCCCHHHHHH---hcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          170 IVFEKLGPSLYDFLR---KNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       170 lv~e~~~~~L~~~l~---~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      |.||+|..+|..+.+   .-....+++..+-.|....+.||.||-. ..|||||+||+|||++..|              
T Consensus       140 iCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G--------------  205 (361)
T KOG1006|consen  140 ICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHG--------------  205 (361)
T ss_pred             eeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCC--------------
Confidence            999999888876654   2223479999999999999999999985 6899999999999997766              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCC--CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                   .+||||||++......  .+.-.|...|||||.+...  +|+-+||+||||++|||+.||..||...
T Consensus       206 -------------~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w  272 (361)
T KOG1006|consen  206 -------------DVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKW  272 (361)
T ss_pred             -------------CEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchH
Confidence                         5677777776554332  1234789999999999754  5899999999999999999999999765


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      ++  ++.++..+...-|+.+.                  .+                       ..--+++..+..+|.-
T Consensus       273 ~s--vfeql~~Vv~gdpp~l~------------------~~-----------------------~~~~~~s~~~~~fint  309 (361)
T KOG1006|consen  273 DS--VFEQLCQVVIGDPPILL------------------FD-----------------------KECVHYSFSMVRFINT  309 (361)
T ss_pred             HH--HHHHHHHHHcCCCCeec------------------Cc-----------------------ccccccCHHHHHHHHH
Confidence            44  55555554322222110                  00                       0112467789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCCCCce
Q 013678          402 LLRYDPAERLKAREALRHPFFTRDVRRPT  430 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f~~~~~~~~  430 (438)
                      ||.+|-++||...+++++||++.-..+..
T Consensus       310 Cl~Kd~~~Rpky~~Lk~~~fyr~y~~~~~  338 (361)
T KOG1006|consen  310 CLIKDRSDRPKYDDLKKFPFYRMYAVEGP  338 (361)
T ss_pred             HhhcccccCcchhhhhcCchhhhhhhcCC
Confidence            99999999999999999999987554433

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=1.1e-37  Score=290.49  Aligned_cols=244  Identities=20%  Similarity=0.227  Sum_probs=181.4

Q ss_pred             eeeeeecceEEEEEEECCC--CcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEc
Q 013678           98 SKMGEGTFGQVVECFDNEK--KELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e  173 (438)
                      +.||+|+||.||++....+  ...+++|.+....  ...+.+.+|+.++..++|+|+     +++++.+.+....|+|||
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~i-----v~~~~~~~~~~~~~lv~e   75 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNI-----LQCLGQCVEAIPYLLVFE   75 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcch-----hheEEEecCCCccEEEEe
Confidence            3689999999999975433  3346677765432  345678899999999988887     999999999999999999


Q ss_pred             cC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          174 KL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       174 ~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |+ +++|.+++.+..  ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.                  
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~------------------  137 (268)
T cd05086          76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLT------------------  137 (268)
T ss_pred             cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCcc------------------
Confidence            99 899999997642  234677788999999999999999999999999999999976654                  


Q ss_pred             ccCCCCCCCeEEecCCCCcccCC-----CCcccccCCCcchhHHHhC-------CCCCcchhHHHHHHHHHHHHh-CCCC
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILG-------LGWNYPCDLWSVGCILVELCS-GEAL  317 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~il~ellt-g~~p  317 (438)
                               ++|+|||++.....     ......++..|+|||++..       ..++.++|||||||++|||++ |..|
T Consensus       138 ---------~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p  208 (268)
T cd05086         138 ---------VKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQP  208 (268)
T ss_pred             ---------EEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCC
Confidence                     56666665543211     1123467889999999853       235789999999999999997 5778


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |...+..+.+..+......                       ..+                     .......+++.+.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~-----------------------~~~---------------------~~~~~~~~~~~~~~  244 (268)
T cd05086         209 YSHLSDREVLNHVIKDQQV-----------------------KLF---------------------KPQLELPYSERWYE  244 (268)
T ss_pred             CCCCCHHHHHHHHHhhccc-----------------------ccC---------------------CCccCCCCcHHHHH
Confidence            8776665544443221000                       000                     00111234668889


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 013678          398 LLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ++..|| .||++|||++++++
T Consensus       245 l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         245 VLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHHHh-hCcccCCCHHHHHH
Confidence            999999 68999999999975

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=5.7e-38  Score=293.02  Aligned_cols=245  Identities=16%  Similarity=0.225  Sum_probs=187.9

Q ss_pred             eEEEeeeeeecceEEEEEEEC---CCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC-
Q 013678           94 CKILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN-  166 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~-  166 (438)
                      |++.+.||+|+||.||+|.+.   .+++.||||++...   ....+.+.+|+.+++.++|+++     +++++++.... 
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~   75 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNV-----IKLIGVSLRSRA   75 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCc-----ceEEEEEccCCC
Confidence            567889999999999999864   35789999998653   2345667889999999998887     99999876432 


Q ss_pred             -----eEEEEEccC-CCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccC
Q 013678          167 -----HICIVFEKL-GPSLYDFLRKNS----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  236 (438)
Q Consensus       167 -----~~~lv~e~~-~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~  236 (438)
                           ..++++||+ +++|.+++....    ...++...++.++.||+.||+|||++||+||||||+||+++.++     
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~-----  150 (273)
T cd05074          76 KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENM-----  150 (273)
T ss_pred             CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCC-----
Confidence                 357899999 999998875321    12578899999999999999999999999999999999997655     


Q ss_pred             CccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHH
Q 013678          237 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL  311 (438)
Q Consensus       237 df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  311 (438)
                                            .++|+|||.+.......     ....++..|++||.+.+..++.++|||||||++|+|
T Consensus       151 ----------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el  208 (273)
T cd05074         151 ----------------------TVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEI  208 (273)
T ss_pred             ----------------------CEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHH
Confidence                                  45666666655432211     122445679999999988899999999999999999


Q ss_pred             Hh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC
Q 013678          312 CS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  390 (438)
Q Consensus       312 lt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (438)
                      ++ |..||.+.+..+....+....                       .                          ......
T Consensus       209 ~~~g~~p~~~~~~~~~~~~~~~~~-----------------------~--------------------------~~~~~~  239 (273)
T cd05074         209 MTRGQTPYAGVENSEIYNYLIKGN-----------------------R--------------------------LKQPPD  239 (273)
T ss_pred             hhCCCCCCCCCCHHHHHHHHHcCC-----------------------c--------------------------CCCCCC
Confidence            99 899997665543332221100                       0                          001123


Q ss_pred             chhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          391 SAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       391 ~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      .+..+.+++.+||+.+|++|||+.+++++
T Consensus       240 ~~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         240 CLEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            45689999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-38  Score=302.78  Aligned_cols=243  Identities=20%  Similarity=0.336  Sum_probs=208.3

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEc
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e  173 (438)
                      ..+.++||-|.||.||.|.++.-.-.||||.++.+....++|+.|..+|+.+.|+|+     |+++++|..+..+|||+|
T Consensus       269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNL-----VqLLGVCT~EpPFYIiTE  343 (1157)
T KOG4278|consen  269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL-----VQLLGVCTHEPPFYIITE  343 (1157)
T ss_pred             eeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccH-----HHHhhhhccCCCeEEEEe
Confidence            456789999999999999999988899999999888888999999999999999988     999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCccc
Q 013678          174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK  252 (438)
Q Consensus       174 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~  252 (438)
                      || .|+|.+||++.....++.-....++.||..|++||..+++|||||-..|+|+.++.                     
T Consensus       344 fM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnh---------------------  402 (1157)
T KOG4278|consen  344 FMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH---------------------  402 (1157)
T ss_pred             cccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccc---------------------
Confidence            99 99999999987767788888899999999999999999999999999999997665                     


Q ss_pred             CCCCCCCeEEecCCCCcccCCCC-ccccc---CCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 013678          253 NLPKSSAIKLIDFGSTTFEHQDH-SYVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL  327 (438)
Q Consensus       253 ~~~~~~~~kl~Dfg~a~~~~~~~-~~~~g---t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~  327 (438)
                            .+|++|||+++.+..+. +...|   ...|.|||.+.-+.++.++|||+|||+|||+.| |..||.+.+-.+.+
T Consensus       403 ------iVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY  476 (1157)
T KOG4278|consen  403 ------IVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY  476 (1157)
T ss_pred             ------eEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHH
Confidence                  46777777777654432 22233   457999999999999999999999999999998 99999998776665


Q ss_pred             HHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCC
Q 013678          328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  407 (438)
Q Consensus       328 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  407 (438)
                      ..+.+.                       .+                          ++.+..+++.+.+|++.||+|+|
T Consensus       477 ~LLEkg-----------------------yR--------------------------M~~PeGCPpkVYeLMraCW~WsP  507 (1157)
T KOG4278|consen  477 GLLEKG-----------------------YR--------------------------MDGPEGCPPKVYELMRACWNWSP  507 (1157)
T ss_pred             HHHhcc-----------------------cc--------------------------ccCCCCCCHHHHHHHHHHhcCCc
Confidence            554332                       12                          23344667889999999999999


Q ss_pred             CCCCCHHHHh
Q 013678          408 AERLKAREAL  417 (438)
Q Consensus       408 ~~Rpta~ell  417 (438)
                      .+||++.|+-
T Consensus       508 sDRPsFaeiH  517 (1157)
T KOG4278|consen  508 SDRPSFAEIH  517 (1157)
T ss_pred             ccCccHHHHH
Confidence            9999988763

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=100.00  E-value=3.8e-38  Score=289.64  Aligned_cols=319  Identities=24%  Similarity=0.392  Sum_probs=219.7

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECC---CCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNE---KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+...|.++++||+|+|++||++.+..   .++.||+|.+.... ......+|++.|..+.    ++.||+.+.+.+..+
T Consensus        33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-~p~ri~~El~~L~~~g----G~~ni~~~~~~~rnn  107 (418)
T KOG1167|consen   33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-SPSRILNELEMLYRLG----GSDNIIKLNGCFRNN  107 (418)
T ss_pred             hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-CchHHHHHHHHHHHhc----cchhhhcchhhhccC
Confidence            456789999999999999999999877   78899999987533 3456889999999986    445679999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecC-cccccCCcccccc
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA-EYVKVPDYKFLSR  243 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~-~~~kl~df~l~~~  243 (438)
                      +++++||||+ ..+..+++.     .++..+++.+++.++.||.++|.+|||||||||+|+|++.. +...|.|||++..
T Consensus       108 d~v~ivlp~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~  182 (418)
T KOG1167|consen  108 DQVAIVLPYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR  182 (418)
T ss_pred             CeeEEEecccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHH
Confidence            9999999999 778888875     47789999999999999999999999999999999999764 6677899999873


Q ss_pred             CCCCC--CcccC----CCCC-CCeEEecCCCCc-----------cc--CCCCcccccCCCcchhHHHhCCC-CCcchhHH
Q 013678          244 SSKDG--SYFKN----LPKS-SAIKLIDFGSTT-----------FE--HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLW  302 (438)
Q Consensus       244 ~~~~~--~~~~~----~~~~-~~~kl~Dfg~a~-----------~~--~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Diw  302 (438)
                      .....  .....    .... ..-..-.+..+.           ..  ........||+.|+|||++...+ .+.++|||
T Consensus       183 ~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiw  262 (418)
T KOG1167|consen  183 YDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIW  262 (418)
T ss_pred             HHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcccee
Confidence            11000  00000    0000 000000111110           00  01112358999999999998865 78999999


Q ss_pred             HHHHHHHHHHhCCCCCC-CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCC-CCCCChhhHHHHHHhc--
Q 013678          303 SVGCILVELCSGEALFQ-THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLL--  378 (438)
Q Consensus       303 SlG~il~elltg~~pf~-~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--  378 (438)
                      |.|||+.-++++..||- ..++.+.+.++..++|.-.-.-       .......  ..-|. +....-......+...  
T Consensus       263 s~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk-------~A~l~g~--~~l~~ksn~~~~~e~~~~f~s~~~  333 (418)
T KOG1167|consen  263 SAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRK-------CAALPGR--ILLWQKSNIPTIPELRVNFETLHI  333 (418)
T ss_pred             eccceeehhhccccccccCccccchHHHHHHHhChHHHHH-------HhhcCCc--eeeeccccccccHHHHhchhccCh
Confidence            99999999999999974 4566777888888777533211       1111111  11111 1100001111111111  


Q ss_pred             ----cch--hhhhh-ccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          379 ----RLP--NLIMQ-HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       379 ----~~~--~~~~~-~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                          ...  +.... ..+..+..+.+|+.+||..||.+|+||+++|+||||....
T Consensus       334 ~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~  388 (418)
T KOG1167|consen  334 ESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEAD  388 (418)
T ss_pred             hhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchh
Confidence                001  11222 2233455899999999999999999999999999999654

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-38  Score=307.81  Aligned_cols=245  Identities=23%  Similarity=0.342  Sum_probs=211.2

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCC---cEEEEEEeec--chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKK---ELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ...|.+.||.|.||.|++|+.+..|   ..||||.++.  ..+.+.+|+.|..||-++.||||     +++.|+......
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNI-----IrLEGVVTks~P  704 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNI-----IRLEGVVTKSKP  704 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcE-----EEEEEEEecCce
Confidence            3478899999999999999987766   4699999985  45678899999999999999988     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      ++||+||| +|+|..||+.+. ..|+..+...+++.|+.|++||-++|+|||||-..|||++.+-               
T Consensus       705 vMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnL---------------  768 (996)
T KOG0196|consen  705 VMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNL---------------  768 (996)
T ss_pred             eEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccce---------------
Confidence            99999999 999999999887 4599999999999999999999999999999999999997654               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCCc----cccc--CCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHS----YVVS--TRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQ  319 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~g--t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~  319 (438)
                                  .+|++|||+++...+...    +.-|  ...|.|||.+.-.+++.++||||+|+++||.++ |..||.
T Consensus       769 ------------vCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYW  836 (996)
T KOG0196|consen  769 ------------VCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW  836 (996)
T ss_pred             ------------EEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccc
Confidence                        567777777776544331    1222  358999999999999999999999999999886 999999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      ..++.+.+..|.+...-+|+                                                 ..++..+..|+
T Consensus       837 dmSNQdVIkaIe~gyRLPpP-------------------------------------------------mDCP~aL~qLM  867 (996)
T KOG0196|consen  837 DMSNQDVIKAIEQGYRLPPP-------------------------------------------------MDCPAALYQLM  867 (996)
T ss_pred             ccchHHHHHHHHhccCCCCC-------------------------------------------------CCCcHHHHHHH
Confidence            99999999998876544331                                                 34566899999


Q ss_pred             HHccccCCCCCCCHHHHhcC
Q 013678          400 QGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~h  419 (438)
                      ..||++|-.+||++.||+++
T Consensus       868 ldCWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  868 LDCWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             HHHHHHHhhcCCCHHHHHHH
Confidence            99999999999999998863

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-37  Score=299.89  Aligned_cols=250  Identities=20%  Similarity=0.302  Sum_probs=206.8

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCC---cEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKK---ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ..++.++||+|.||.|++|.+...+   ..||||.++...  ....+|.+|+.+|.+|.|+++     +++||+..+ ..
T Consensus       111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hl-----iRLyGvVl~-qp  184 (1039)
T KOG0199|consen  111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHL-----IRLYGVVLD-QP  184 (1039)
T ss_pred             HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcce-----eEEeeeecc-ch
Confidence            3467789999999999999876533   458999997543  256889999999999999887     999999887 77


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +.+|||++ .|+|.+.|++.....|.......|+.||+.|+.||.++++|||||-..|||+....               
T Consensus       185 ~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllaspr---------------  249 (1039)
T KOG0199|consen  185 AMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPR---------------  249 (1039)
T ss_pred             hhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccc---------------
Confidence            89999999 99999999985556788999999999999999999999999999999999996544               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCCcccc------cCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV------STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQ  319 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~------gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~  319 (438)
                                  .+||+|||+.+.+......++      -...|+|||.+....++.++|||+|||+||||++ |..||.
T Consensus       250 ------------tVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~  317 (1039)
T KOG0199|consen  250 ------------TVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWV  317 (1039)
T ss_pred             ------------eeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCC
Confidence                        466666666666554443321      2457999999999999999999999999999998 899999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      +....+++..|.+.-                                                 ....++.+++++.+++
T Consensus       318 G~~g~qIL~~iD~~e-------------------------------------------------rLpRPk~csedIY~im  348 (1039)
T KOG0199|consen  318 GCRGIQILKNIDAGE-------------------------------------------------RLPRPKYCSEDIYQIM  348 (1039)
T ss_pred             CCCHHHHHHhccccc-------------------------------------------------cCCCCCCChHHHHHHH
Confidence            999998888775310                                                 1123456788999999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCC
Q 013678          400 QGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      ++||..+|++|||+..|.+.-+..+
T Consensus       349 k~cWah~paDRptFsair~~~~l~e  373 (1039)
T KOG0199|consen  349 KNCWAHNPADRPTFSAIREDLVLAE  373 (1039)
T ss_pred             HHhccCCccccccHHHHHHhHHHHh
Confidence            9999999999999998876555444

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-37  Score=284.19  Aligned_cols=208  Identities=23%  Similarity=0.282  Sum_probs=163.3

Q ss_pred             CCCCCceeeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcce
Q 013678           76 DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC  155 (438)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~i  155 (438)
                      ++++...++.+...++.+.++++.||+|.||.||+|.++  |+.||||++...++..-.-..||.....|+|+||     
T Consensus       195 SGSGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE~SWfrEtEIYqTvmLRHENI-----  267 (513)
T KOG2052|consen  195 SGSGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDERSWFRETEIYQTVMLRHENI-----  267 (513)
T ss_pred             CCCCCCchhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccchhhhhhHHHHHHHHHhccchh-----
Confidence            344455667777888999999999999999999999765  7889999997655433333345555556889888     


Q ss_pred             EEecceeccC----CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-----C---CceecCCCC
Q 013678          156 VQIRNWFDYR----NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-----L---RLIHTDLKP  222 (438)
Q Consensus       156 v~~~~~~~~~----~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-----~---~ivHrDlkp  222 (438)
                      +.+++.-..+    .+++||++|- .|||+|||.+.   .++.+...+++..++.||+|||-     +   .|.|||||.
T Consensus       268 LgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKS  344 (513)
T KOG2052|consen  268 LGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKS  344 (513)
T ss_pred             hhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccc
Confidence            8888765433    2799999999 99999999985   59999999999999999999995     3   399999999


Q ss_pred             CcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCC----C--C
Q 013678          223 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG----W--N  296 (438)
Q Consensus       223 ~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~----~--~  296 (438)
                      .|||+..+|.+.|+|+||+.+...+.+            .+        +......+||..|||||++...-    +  -
T Consensus       345 KNILVKkn~~C~IADLGLAv~h~~~t~------------~i--------di~~N~rVGTKRYMAPEvLdetin~~~Fesy  404 (513)
T KOG2052|consen  345 KNILVKKNGTCCIADLGLAVRHDSDTD------------TI--------DIPPNPRVGTKRYMAPEVLDETINMKHFESY  404 (513)
T ss_pred             ccEEEccCCcEEEeeceeeEEecccCC------------cc--------cCCCCCccceeeccChHHhhhhcChhhhhhh
Confidence            999999999887777777665443321            11        12234469999999999997542    1  1


Q ss_pred             cchhHHHHHHHHHHHHh
Q 013678          297 YPCDLWSVGCILVELCS  313 (438)
Q Consensus       297 ~~~DiwSlG~il~ellt  313 (438)
                      ..+||||||.|+||++.
T Consensus       405 k~ADIYafgLVlWEiar  421 (513)
T KOG2052|consen  405 KRADIYAFGLVLWEIAR  421 (513)
T ss_pred             hHHHHHHHHHHHHHHHH
Confidence            46899999999999985

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=5.8e-36  Score=273.51  Aligned_cols=238  Identities=36%  Similarity=0.599  Sum_probs=192.0

Q ss_pred             cceEEEEEEECCCCcEEEEEEeecchhh--HHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-CCCHH
Q 013678          104 TFGQVVECFDNEKKELVAIKIVRSINKY--REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLY  180 (438)
Q Consensus       104 ~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~  180 (438)
                      +||.||+|.+..+++.||+|++......  .+.+.+|+..+++++|+++     +++++++......+++|||+ +++|.
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-----~~~~~~~~~~~~~~l~~e~~~~~~L~   75 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNI-----VRLYDVFEDEDKLYLVMEYCDGGDLF   75 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcH-----HHHHhheeeCCEEEEEEeCCCCCCHH
Confidence            5899999999988999999998754322  5778899999999988777     99999999889999999999 77999


Q ss_pred             HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCe
Q 013678          181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI  260 (438)
Q Consensus       181 ~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~  260 (438)
                      +++....  .++...+..++.+++.+|.+||+.+|+|+||+|+||+++.++                           .+
T Consensus        76 ~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~---------------------------~~  126 (244)
T smart00220       76 DLLKKRG--RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDG---------------------------HV  126 (244)
T ss_pred             HHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCC---------------------------cE
Confidence            9998754  389999999999999999999999999999999999997655                           56


Q ss_pred             EEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCC
Q 013678          261 KLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH-LAMMERVLGPL  337 (438)
Q Consensus       261 kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~-~~~i~~~~~~~  337 (438)
                      +|+|||.+......  .....++..|++||.+.+..++.++||||||+++|++++|..||........ ...+.......
T Consensus       127 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~  206 (244)
T smart00220      127 KLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF  206 (244)
T ss_pred             EEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC
Confidence            77777776654432  2335678899999999888889999999999999999999999976333322 22221110000


Q ss_pred             ChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHh
Q 013678          338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL  417 (438)
Q Consensus       338 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell  417 (438)
                      .                                               .....++.++.+++.+||..||++||++.+++
T Consensus       207 ~-----------------------------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~  239 (244)
T smart00220      207 P-----------------------------------------------PPEWKISPEAKDLIRKLLVKDPEKRLTAEEAL  239 (244)
T ss_pred             c-----------------------------------------------cccccCCHHHHHHHHHHccCCchhccCHHHHh
Confidence            0                                               00001456899999999999999999999999


Q ss_pred             cCCCC
Q 013678          418 RHPFF  422 (438)
Q Consensus       418 ~hp~f  422 (438)
                      +||||
T Consensus       240 ~~~~~  244 (244)
T smart00220      240 QHPFF  244 (244)
T ss_pred             hCCCC
Confidence            99997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=100.00  E-value=8.3e-38  Score=308.03  Aligned_cols=256  Identities=23%  Similarity=0.270  Sum_probs=194.3

Q ss_pred             EeeeeeecceE-EEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678           97 LSKMGEGTFGQ-VVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus        97 ~~~lg~G~~g~-V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      .+.+|.|+.|+ ||+|.  ..|+.||||.+-  .+....+.+|+..|+.-.    .|+|||++++.-.+..+.||..|+|
T Consensus       514 ~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll--~e~~~~A~rEi~lL~eSD----~H~NviRyyc~E~d~qF~YIalELC  585 (903)
T KOG1027|consen  514 KEILGYGSNGTVVFRGV--YEGREVAVKRLL--EEFFDFAQREIQLLQESD----EHPNVIRYYCSEQDRQFLYIALELC  585 (903)
T ss_pred             HHHcccCCCCcEEEEEe--eCCceehHHHHh--hHhHHHHHHHHHHHHhcc----CCCceEEEEeeccCCceEEEEehHh
Confidence            36689998876 58997  457899999764  344567889999988764    3466699999999999999999999


Q ss_pred             CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccC
Q 013678          176 GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN  253 (438)
Q Consensus       176 ~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~  253 (438)
                      ..+|.+++...  ..........+.++.|++.||++||+.+||||||||.||||+...                      
T Consensus       586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~----------------------  643 (903)
T KOG1027|consen  586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPS----------------------  643 (903)
T ss_pred             hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccC----------------------
Confidence            99999999874  111112245678899999999999999999999999999997632                      


Q ss_pred             CCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhC-CCCCCCCChHHH
Q 013678          254 LPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG-EALFQTHENLEH  326 (438)
Q Consensus       254 ~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg-~~pf~~~~~~~~  326 (438)
                      .+...+++|+|||+++......      ....||-.|+|||++.....+.++||+||||++|+.++| ..||...-..+ 
T Consensus       644 ~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~-  722 (903)
T KOG1027|consen  644 ADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-  722 (903)
T ss_pred             CCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh-
Confidence            1234578899999887765443      235789999999999998888999999999999999985 89997532221 


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                       ..|.....                                               ......+....++.|||.+||..|
T Consensus       723 -~NIl~~~~-----------------------------------------------~L~~L~~~~d~eA~dLI~~ml~~d  754 (903)
T KOG1027|consen  723 -ANILTGNY-----------------------------------------------TLVHLEPLPDCEAKDLISRMLNPD  754 (903)
T ss_pred             -hhhhcCcc-----------------------------------------------ceeeeccCchHHHHHHHHHhcCCC
Confidence             11111000                                               000001111127899999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCCCCcee
Q 013678          407 PAERLKAREALRHPFFTRDVRRPTL  431 (438)
Q Consensus       407 P~~Rpta~ell~hp~f~~~~~~~~~  431 (438)
                      |..||+|.+||.||+|-+..++-..
T Consensus       755 P~~RPsa~~VL~HPlFW~~ekrL~F  779 (903)
T KOG1027|consen  755 PQLRPSATDVLNHPLFWDSEKRLSF  779 (903)
T ss_pred             cccCCCHHHHhCCCccCChHHHHHH
Confidence            9999999999999999876555433

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-37  Score=294.56  Aligned_cols=240  Identities=25%  Similarity=0.402  Sum_probs=198.8

Q ss_pred             EEEeeeeeecceEEEEEEECCC----CcEEEEEEeec--chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           95 KILSKMGEGTFGQVVECFDNEK----KELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~----~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .+.++||.|.||.||+|.....    .-.||||..+.  .....+.|+.|..+++.+.||+|     ++++|++.+ ...
T Consensus       392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphI-----ikLIGv~~e-~P~  465 (974)
T KOG4257|consen  392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHI-----IKLIGVCVE-QPM  465 (974)
T ss_pred             cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcch-----hheeeeeec-cce
Confidence            3457899999999999976433    33589998875  34567889999999999999888     999999876 579


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |||||++ -|.|..|++.+. ..++......+++||+.||.|||+.++|||||-..|||+.+..                
T Consensus       466 WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~----------------  528 (974)
T KOG4257|consen  466 WIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQ----------------  528 (974)
T ss_pred             eEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcc----------------
Confidence            9999999 999999999776 5799999999999999999999999999999999999996543                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCCcc--ccc--CCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVS--TRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHE  322 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~g--t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~  322 (438)
                                 .+||+|||+++......-+  ..|  ...|||||.+.-..++.++|||-|||++||++. |..||.+-.
T Consensus       529 -----------CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk  597 (974)
T KOG4257|consen  529 -----------CVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK  597 (974)
T ss_pred             -----------eeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccc
Confidence                       6889999998887665432  122  457999999999999999999999999999987 999999987


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      +.+.+..+.+                       |.++.                          .++.+++.+..|+.+|
T Consensus       598 NsDVI~~iEn-----------------------GeRlP--------------------------~P~nCPp~LYslmskc  628 (974)
T KOG4257|consen  598 NSDVIGHIEN-----------------------GERLP--------------------------CPPNCPPALYSLMSKC  628 (974)
T ss_pred             ccceEEEecC-----------------------CCCCC--------------------------CCCCCChHHHHHHHHH
Confidence            7666554432                       22222                          2346788999999999


Q ss_pred             cccCCCCCCCHHHHh
Q 013678          403 LRYDPAERLKAREAL  417 (438)
Q Consensus       403 L~~dP~~Rpta~ell  417 (438)
                      |++||.+||++.|+.
T Consensus       629 WayeP~kRPrftei~  643 (974)
T KOG4257|consen  629 WAYEPSKRPRFTEIK  643 (974)
T ss_pred             hccCcccCCcHHHHH
Confidence            999999999987754

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-36  Score=252.14  Aligned_cols=208  Identities=22%  Similarity=0.409  Sum_probs=168.4

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      ...+..||+|+||.|-+.++..+|...|+|.+...  .....+..+|+.+..+.    ...|.+|++++.+.....++|.
T Consensus        48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~----~~CPf~V~FyGa~~regdvwIc  123 (282)
T KOG0984|consen   48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRT----VDCPFTVHFYGALFREGDVWIC  123 (282)
T ss_pred             hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccC----CCCCeEEEeehhhhccccEEEe
Confidence            34567899999999999999999999999998742  34445566677665443    2446779999999999999999


Q ss_pred             EccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          172 FEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       172 ~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      ||.|..||..+.++  ..+..+++..+-+|+..++.||.|||++ .|||||+||+||||+.+|                 
T Consensus       124 ME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~G-----------------  186 (282)
T KOG0984|consen  124 MELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDG-----------------  186 (282)
T ss_pred             HHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCC-----------------
Confidence            99999999887653  2346899999999999999999999975 799999999999998776                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCCc-c-cccCCCcchhHHHhCC----CCCcchhHHHHHHHHHHHHhCCCCCCC-C
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDHS-Y-VVSTRHYRAPEVILGL----GWNYPCDLWSVGCILVELCSGEALFQT-H  321 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-~-~~gt~~y~aPE~~~~~----~~~~~~DiwSlG~il~elltg~~pf~~-~  321 (438)
                                ++|+||||.+....+... + -.|...|||||.+...    .|+-++||||||+++.||.+++.||.. .
T Consensus       187 ----------qVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~  256 (282)
T KOG0984|consen  187 ----------QVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG  256 (282)
T ss_pred             ----------cEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence                      678888888776544332 2 4788999999998743    589999999999999999999999964 4


Q ss_pred             ChHHHHHHHHH
Q 013678          322 ENLEHLAMMER  332 (438)
Q Consensus       322 ~~~~~~~~i~~  332 (438)
                      +..+++..+.+
T Consensus       257 tpF~qLkqvVe  267 (282)
T KOG0984|consen  257 TPFQQLKQVVE  267 (282)
T ss_pred             CHHHHHHHHhc
Confidence            55666665554

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=100.00  E-value=9.5e-36  Score=282.25  Aligned_cols=198  Identities=25%  Similarity=0.462  Sum_probs=172.0

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHH---------HHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA---------AMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~---------~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      ..|..++.||+|+||.|++|.++.+...|+||.+.+..--.+.         .--||.||..|+.+  .|+||++++++|
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~--sH~NIlKlLdfF  638 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKH--SHENILKLLDFF  638 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhc--Cccchhhhhhee
Confidence            3489999999999999999999999999999999764432222         23499999999933  234459999999


Q ss_pred             ccCCeEEEEEccC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          163 DYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       163 ~~~~~~~lv~e~~--~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                      ++++++||+||--  |-+|+++|..+.  .+++.+++.|++|++.|+++||++||||||||-+||.++.+|         
T Consensus       639 Eddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g---------  707 (772)
T KOG1152|consen  639 EDDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNG---------  707 (772)
T ss_pred             ecCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhccccccccCceecccccccEEEecCC---------
Confidence            9999999999998  679999999876  799999999999999999999999999999999999998766         


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhCCCC-CcchhHHHHHHHHHHHHhCCCCC
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf  318 (438)
                                        -+||+|||+|...... ...++||..|.|||++.|.+| +..-|||+||++||.++....||
T Consensus       708 ------------------~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy  769 (772)
T KOG1152|consen  708 ------------------FVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY  769 (772)
T ss_pred             ------------------eEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence                              5789999988776543 456899999999999999886 67889999999999999999998


Q ss_pred             CC
Q 013678          319 QT  320 (438)
Q Consensus       319 ~~  320 (438)
                      ..
T Consensus       770 yn  771 (772)
T KOG1152|consen  770 YN  771 (772)
T ss_pred             cC
Confidence            63

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-35  Score=272.87  Aligned_cols=272  Identities=23%  Similarity=0.297  Sum_probs=183.5

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC----e
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN----H  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~----~  167 (438)
                      ...++++.||+|.||.||+|+.  +++.||||++..  ...+.+..|.+|.+..   +..|+||+++++.-....    .
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~--~~kqs~~~Ek~Iy~lp---~m~h~nIl~Fi~~ekr~t~~~~e  282 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPE--QEKQSFQNEKNIYSLP---GMKHENILQFIGAEKRGTADRME  282 (534)
T ss_pred             CchhhHHHhhcCccceeehhhc--cCceeEEEecCH--HHHHHHHhHHHHHhcc---CccchhHHHhhchhccCCccccc
Confidence            4457889999999999999974  568999999974  3345566666665542   334445599998766544    8


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---------CCceecCCCCCcEEEecCcccccCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE---------LRLIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---------~~ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      ++||++|. .|+|.++|..+   .+++....+++..|++||+|||+         ..|+|||||..|||+.+++++.|+|
T Consensus       283 ywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD  359 (534)
T KOG3653|consen  283 YWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD  359 (534)
T ss_pred             eeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence            99999999 99999999987   59999999999999999999996         2599999999999998888766666


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCC-CC-----cchhHHHHHHHHHHH
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-WN-----YPCDLWSVGCILVEL  311 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~~DiwSlG~il~el  311 (438)
                      |||+.+....                   .+   ......-+||..|||||++.+.- +.     .+.||||+|.||||+
T Consensus       360 FGLAl~~~p~-------------------~~---~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi  417 (534)
T KOG3653|consen  360 FGLALRLEPG-------------------KP---QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEI  417 (534)
T ss_pred             cceeEEecCC-------------------CC---CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            6654432211                   00   01111258999999999998753 22     468999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCc
Q 013678          312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  391 (438)
Q Consensus       312 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (438)
                      +++..-+......+...-....+|.-|..-..+     ..-.++..+..||+          .|.         .+  ..
T Consensus       418 ~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq-----~~VV~kK~RP~~p~----------~W~---------~h--~~  471 (534)
T KOG3653|consen  418 ASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQ-----ELVVRKKQRPKIPD----------AWR---------KH--AG  471 (534)
T ss_pred             HhhcccccCCCCCcccCchhHHhcCCCCHHHHH-----HHHHhhccCCCChh----------hhh---------cC--cc
Confidence            987654431111111111222333333211100     00111112222222          111         00  22


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHH------HhcCCC
Q 013678          392 AGDLIDLLQGLLRYDPAERLKARE------ALRHPF  421 (438)
Q Consensus       392 ~~~l~~ll~~~L~~dP~~Rpta~e------ll~hp~  421 (438)
                      ...+++.+..||+.||+-|.||.=      .+.|.|
T Consensus       472 ~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~  507 (534)
T KOG3653|consen  472 MAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW  507 (534)
T ss_pred             HHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence            346899999999999999999753      345665

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=1.1e-34  Score=316.31  Aligned_cols=187  Identities=19%  Similarity=0.282  Sum_probs=154.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      ..|...+.||+|+||.||+|++..++..||||.++....   ....|+.++++++|+||     +++++++.+.+..|+|
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l~HpnI-----v~~~~~~~~~~~~~lv  761 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKLQHPNI-----VKLIGLCRSEKGAYLI  761 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhCCCCCc-----ceEEEEEEcCCCCEEE
Confidence            446677889999999999999999999999999864332   22346888888888877     9999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH---ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |||+ +++|.++++     .+++..+..++.||+.||+|||   +.+|+||||||+||+++.++..              
T Consensus       762 ~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~--------------  822 (968)
T PLN00113        762 HEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEP--------------  822 (968)
T ss_pred             EeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCce--------------
Confidence            9999 999999995     3889999999999999999999   6699999999999999765432              


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                   ++. ||.+...... ....||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       823 -------------~~~-~~~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~  880 (968)
T PLN00113        823 -------------HLR-LSLPGLLCTD-TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADA  880 (968)
T ss_pred             -------------EEE-eccccccccC-CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence                         222 3333222111 223678999999999998999999999999999999999999953

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-36  Score=290.17  Aligned_cols=259  Identities=26%  Similarity=0.396  Sum_probs=212.5

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      .++|.++.++|+|+||.||+|+++.+++..|+|+++... ......+.|+-+++..+|+||     +.+++.+.....++
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~ni-----vay~gsylr~dklw   88 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNI-----VAYFGSYLRRDKLW   88 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcCh-----HHHHhhhhhhcCcE
Confidence            467899999999999999999999999999999998643 334556779999999999988     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      |+|||| ||+|.+..+-.+  .+++.++..+++..++||+|||++|-+|||||-.||++++.|.+               
T Consensus        89 icMEycgggslQdiy~~Tg--plselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDv---------------  151 (829)
T KOG0576|consen   89 ICMEYCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDV---------------  151 (829)
T ss_pred             EEEEecCCCcccceeeecc--cchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCce---------------
Confidence            999999 999999876654  89999999999999999999999999999999999999887755               


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHh---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                  |+.|||.+.....   ....+.||++|||||+..   ...|...+|||++|+...|+-.-++|.-...
T Consensus       152 ------------klaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh  219 (829)
T KOG0576|consen  152 ------------KLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH  219 (829)
T ss_pred             ------------eecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc
Confidence                        5555555443322   123368999999999875   4569999999999999999998888876666


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ..+.+..+.+-...+|.                                             .+.....++.+.+|++.+
T Consensus       220 pmr~l~LmTkS~~qpp~---------------------------------------------lkDk~kws~~fh~fvK~a  254 (829)
T KOG0576|consen  220 PMRALFLMTKSGFQPPT---------------------------------------------LKDKTKWSEFFHNFVKGA  254 (829)
T ss_pred             hHHHHHHhhccCCCCCc---------------------------------------------ccCCccchHHHHHHHHHH
Confidence            66666655543333321                                             111124466889999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      |..+|++|||++.+|.|||......+
T Consensus       255 ltknpKkRptaeklL~h~fvs~~l~~  280 (829)
T KOG0576|consen  255 LTKNPKKRPTAEKLLQHPFVSQTLSR  280 (829)
T ss_pred             hcCCCccCCChhhheeceeeccchhh
Confidence            99999999999999999999887443

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=1.8e-34  Score=306.71  Aligned_cols=210  Identities=19%  Similarity=0.195  Sum_probs=161.1

Q ss_pred             EEecceec-------cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe
Q 013678          156 VQIRNWFD-------YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  228 (438)
Q Consensus       156 v~~~~~~~-------~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~  228 (438)
                      ..++++|.       ....++++||+++++|.+++.... ..+++..++.+++||+.||+|||++||+||||||+||||+
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~  114 (793)
T PLN00181         36 RSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPD-RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMS  114 (793)
T ss_pred             HHhhcccCCccccccccchhhhhhccCCccHHHHHhccc-ccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEc
Confidence            56666662       234678889999889999997543 4699999999999999999999999999999999999999


Q ss_pred             cCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-------------------CcccccCCCcchhHH
Q 013678          229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-------------------HSYVVSTRHYRAPEV  289 (438)
Q Consensus       229 ~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------------------~~~~~gt~~y~aPE~  289 (438)
                      ..|.+|++|||++.....        +....+|++|||+++.....                   ....+||+.|||||+
T Consensus       115 ~~~~~k~~d~~~~~~~~~--------~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~  186 (793)
T PLN00181        115 SFNHVSFIESASCSDSGS--------DEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE  186 (793)
T ss_pred             ccCcEEEeeccccCcccc--------cccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence            999999999998765432        23457999999998753210                   011468999999999


Q ss_pred             HhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChh
Q 013678          290 ILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD  369 (438)
Q Consensus       290 ~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (438)
                      +.+..++.++|||||||+||||++|..|+....  .....+...  ..|...                            
T Consensus       187 ~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~--~~~~~~----------------------------  234 (793)
T PLN00181        187 DNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHR--VLPPQI----------------------------  234 (793)
T ss_pred             hccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHh--hcChhh----------------------------
Confidence            999999999999999999999999988874321  111111110  001000                            


Q ss_pred             hHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          370 SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                                         ........+++.+||+.||.+|||+.|+|+||||.+.
T Consensus       235 -------------------~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        235 -------------------LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             -------------------hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence                               0012345688999999999999999999999999864

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-34  Score=249.82  Aligned_cols=260  Identities=22%  Similarity=0.279  Sum_probs=200.8

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecce-eccCCe
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW-FDYRNH  167 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~-~~~~~~  167 (438)
                      .+.+.|.|.+.||+|.||.+.+|+++.++..+|+|.+.+......++.+|...--.|.|+    .||+.-|+. |+..+.
T Consensus        21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H----~hIi~tY~vaFqt~d~   96 (378)
T KOG1345|consen   21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPH----QHIIDTYEVAFQTSDA   96 (378)
T ss_pred             chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccc----hhhhHHHHHHhhcCce
Confidence            456889999999999999999999999999999999988777788899998776556543    445766654 788889


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      ++++|||+ .|+|.+-+...   .+-+...++++.|+++||.|+|++++||||||.+||||-..+               
T Consensus        97 YvF~qE~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~d---------------  158 (378)
T KOG1345|consen   97 YVFVQEFAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDAD---------------  158 (378)
T ss_pred             EEEeeccCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCC---------------
Confidence            99999999 99999888765   488999999999999999999999999999999999996532               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCC-----CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-----GWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                ..++||||||.++..+......--+..|.+||+....     ...+.+|||.||+++|.++||.+||+..
T Consensus       159 ----------f~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka  228 (378)
T KOG1345|consen  159 ----------FYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKA  228 (378)
T ss_pred             ----------ccEEEeeecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhh
Confidence                      3489999999998776665555567789999987643     2468899999999999999999999743


Q ss_pred             ChHH-HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          322 ENLE-HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       322 ~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      ...+ ......+..+.                                          .. ..........++.+..+.+
T Consensus       229 ~~~d~~Y~~~~~w~~r------------------------------------------k~-~~~P~~F~~fs~~a~r~Fk  265 (378)
T KOG1345|consen  229 SIMDKPYWEWEQWLKR------------------------------------------KN-PALPKKFNPFSEKALRLFK  265 (378)
T ss_pred             hccCchHHHHHHHhcc------------------------------------------cC-ccCchhhcccCHHHHHHHH
Confidence            2211 11112111110                                          00 0111223455678888999


Q ss_pred             HccccCCCCC---CCHHHHhcCCCCC
Q 013678          401 GLLRYDPAER---LKAREALRHPFFT  423 (438)
Q Consensus       401 ~~L~~dP~~R---pta~ell~hp~f~  423 (438)
                      +-|..+|++|   .++......-|..
T Consensus       266 k~lt~~~~drcki~~~kk~rk~~w~E  291 (378)
T KOG1345|consen  266 KSLTPRFKDRCKIWTAKKMRKCLWKE  291 (378)
T ss_pred             HhcCCcccccchhHHHHHHHHHHHHH
Confidence            9999999999   5666666666653

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-33  Score=276.65  Aligned_cols=241  Identities=21%  Similarity=0.271  Sum_probs=193.3

Q ss_pred             EEEeeeeeecceEEEEEEECCCC----cEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           95 KILSKMGEGTFGQVVECFDNEKK----ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      +..++||+|+||+||+|.+-..|    .+||||++....  +....+..|+.+|.+|.|+|+     +++++++.... +
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl-----~RLLgvc~~s~-~  772 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNL-----LRLLGVCMLST-L  772 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchH-----HHHhhhcccch-H
Confidence            45688999999999999875544    468999886543  446788999999999999988     99999988755 8


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      .||++|+ .|+|.|+++.+. ..+-......|.+||++|+.|||++++|||||-..|||+...+.               
T Consensus       773 qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~h---------------  836 (1177)
T KOG1025|consen  773 QLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNH---------------  836 (1177)
T ss_pred             HHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCe---------------
Confidence            8999999 999999998765 57888999999999999999999999999999999999977664               


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCCcc---c--ccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSY---V--VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTH  321 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~--~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~  321 (438)
                                  +||.|||+++........   .  .-.+.|||-|.+....|+.++|||||||++||++| |..|+.+.
T Consensus       837 ------------vkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi  904 (1177)
T KOG1025|consen  837 ------------VKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGI  904 (1177)
T ss_pred             ------------EEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCC
Confidence                        556666666554332221   1  12457999999999999999999999999999998 99999887


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      ...++-..+.                       .+.++                          ..++..+-++.-++.+
T Consensus       905 ~~~eI~dlle-----------------------~geRL--------------------------sqPpiCtiDVy~~mvk  935 (1177)
T KOG1025|consen  905 PAEEIPDLLE-----------------------KGERL--------------------------SQPPICTIDVYMVMVK  935 (1177)
T ss_pred             CHHHhhHHHh-----------------------ccccC--------------------------CCCCCccHHHHHHHHH
Confidence            6554332221                       12122                          2234556788999999


Q ss_pred             ccccCCCCCCCHHHHhc
Q 013678          402 LLRYDPAERLKAREALR  418 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~  418 (438)
                      ||..|+..||+++++.+
T Consensus       936 Cwmid~~~rp~fkel~~  952 (1177)
T KOG1025|consen  936 CWMIDADSRPTFKELAE  952 (1177)
T ss_pred             HhccCcccCccHHHHHH
Confidence            99999999999998764

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-32  Score=281.14  Aligned_cols=246  Identities=24%  Similarity=0.424  Sum_probs=191.7

Q ss_pred             ceEEEeeeeeecceEEEEEEECC-------CCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           93 RCKILSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      +..+.+.||+|.||.|++|.-..       ....||||.++..  ....+.+..|+++++.+.++    +|++.+++.+.
T Consensus       297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H----~niv~llG~~t  372 (609)
T KOG0200|consen  297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKH----PNIVNLLGACT  372 (609)
T ss_pred             hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCC----cchhhheeeec
Confidence            33566799999999999996421       1457999998743  34567888999999998732    44599999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcC------------C--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNS------------Y--RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  228 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~------------~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~  228 (438)
                      ..+.+++|+||+ .|+|.++++...            .  ..++..+...++.||+.|++||++..+|||||-..|||+.
T Consensus       373 ~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~  452 (609)
T KOG0200|consen  373 QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLIT  452 (609)
T ss_pred             cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEec
Confidence            999999999999 999999998754            0  1388999999999999999999999999999999999997


Q ss_pred             cCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCccc----cc--CCCcchhHHHhCCCCCcchhHH
Q 013678          229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV----VS--TRHYRAPEVILGLGWNYPCDLW  302 (438)
Q Consensus       229 ~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~----~g--t~~y~aPE~~~~~~~~~~~Diw  302 (438)
                      .+.                           .+||+|||+|+.......+.    .|  ...|||||.+....|+.++|||
T Consensus       453 ~~~---------------------------~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVW  505 (609)
T KOG0200|consen  453 KNK---------------------------VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVW  505 (609)
T ss_pred             CCC---------------------------EEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhh
Confidence            655                           46667777776433332221    22  2349999999999999999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCC-hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccc
Q 013678          303 SVGCILVELCS-GEALFQTHE-NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL  380 (438)
Q Consensus       303 SlG~il~ellt-g~~pf~~~~-~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (438)
                      ||||+|||+++ |..||.+.. ..+.+..+                       +.|.+.                     
T Consensus       506 SfGI~L~EifsLG~~PYp~~~~~~~l~~~l-----------------------~~G~r~---------------------  541 (609)
T KOG0200|consen  506 SFGILLWEIFTLGGTPYPGIPPTEELLEFL-----------------------KEGNRM---------------------  541 (609)
T ss_pred             HHHHHHHHHhhCCCCCCCCCCcHHHHHHHH-----------------------hcCCCC---------------------
Confidence            99999999998 899998744 33322211                       122222                     


Q ss_pred             hhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       381 ~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                           ..+..++.++.++++.||+.+|++||++.++.+
T Consensus       542 -----~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  542 -----EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             -----CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence                 233456779999999999999999999988764

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.97  E-value=1.2e-30  Score=232.66  Aligned_cols=207  Identities=39%  Similarity=0.624  Sum_probs=179.3

Q ss_pred             eeeecceEEEEEEECCCCcEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-C
Q 013678          100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-G  176 (438)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~  176 (438)
                      ||+|++|.||++.+..+++.+++|++.....  ..+.+.+|+..++.+.|+++     +++++++......+++||++ +
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-----~~~~~~~~~~~~~~~~~e~~~~   75 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNI-----VKLYGVFEDENHLYLVMEYCEG   75 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCe-----eeEeeeeecCCeEEEEEecCCC
Confidence            6899999999999988899999999976544  25678899999999988666     99999999989999999999 7


Q ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec-CcccccCCccccccCCCCCCcccCCC
Q 013678          177 PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDYKFLSRSSKDGSYFKNLP  255 (438)
Q Consensus       177 ~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~-~~~~kl~df~l~~~~~~~~~~~~~~~  255 (438)
                      ++|.+++.... ..++...+..++.+++.+|++||++|++|+||+|.||+++. ++                        
T Consensus        76 ~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~------------------------  130 (215)
T cd00180          76 GSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNG------------------------  130 (215)
T ss_pred             CcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCC------------------------
Confidence            99999998652 35899999999999999999999999999999999999975 33                        


Q ss_pred             CCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 013678          256 KSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  331 (438)
Q Consensus       256 ~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~  331 (438)
                         .++|+|||.+......   .....+...|++||.+... ..+.++|+|++|++++++                    
T Consensus       131 ---~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------  187 (215)
T cd00180         131 ---KVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------  187 (215)
T ss_pred             ---cEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------
Confidence               5778888877655443   2335678899999999887 788999999999999998                    


Q ss_pred             HHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCC
Q 013678          332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  411 (438)
Q Consensus       332 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  411 (438)
                      .                                                             .+.+++.+||+.||++||
T Consensus       188 ~-------------------------------------------------------------~~~~~l~~~l~~~p~~R~  206 (215)
T cd00180         188 P-------------------------------------------------------------ELKDLIRKMLQKDPEKRP  206 (215)
T ss_pred             H-------------------------------------------------------------HHHHHHHHHhhCCcccCc
Confidence            0                                                             467899999999999999


Q ss_pred             CHHHHhcCC
Q 013678          412 KAREALRHP  420 (438)
Q Consensus       412 ta~ell~hp  420 (438)
                      ++.++++|+
T Consensus       207 ~~~~l~~~~  215 (215)
T cd00180         207 SAKEILEHL  215 (215)
T ss_pred             CHHHHhhCC
Confidence            999999875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.97  E-value=6.1e-30  Score=231.19  Aligned_cols=193  Identities=38%  Similarity=0.622  Sum_probs=166.6

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      |.+.+.||.|++|.||++.+..+++.+|+|.+.....  ..+.+.+|+..+..++|+++     +++++++......+++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i-----~~~~~~~~~~~~~~~v   75 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNI-----VKLYGVFEDPEPLYLV   75 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCh-----hhheeeeecCCceEEE
Confidence            5678999999999999999998899999999975432  46778889999999987776     9999999888999999


Q ss_pred             EccC-CCCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          172 FEKL-GPSLYDFLRKNSYRS-FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~-l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      +|++ +++|.+++....  . +++..+..++.+++.+|.+||+++++|+||+|.||+++.++                  
T Consensus        76 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~------------------  135 (225)
T smart00221       76 MEYCEGGDLFDYLRKKG--GKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDG------------------  135 (225)
T ss_pred             EeccCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC------------------
Confidence            9999 779999998754  3 89999999999999999999999999999999999996644                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHH-hCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVI-LGLGWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                               .++|+|||.+.......    ....++..|++||.+ ....++.++|||+||+++++|++|+.||..
T Consensus       136 ---------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      136 ---------LVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ---------CEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence                     57777777776654432    345778899999998 556688899999999999999999999966

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.97  E-value=4.9e-30  Score=233.36  Aligned_cols=254  Identities=16%  Similarity=0.181  Sum_probs=187.4

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCC-----CcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecce
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~  161 (438)
                      .-..|++....+-+|.||.||.|.+++.     .+.|-+|.++..  ......+..|--.+..+.|+|+     ..+.++
T Consensus       281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nl-----l~V~~V  355 (563)
T KOG1024|consen  281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNL-----LSVLGV  355 (563)
T ss_pred             hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCc-----cceeEE
Confidence            3456788889999999999999966543     234666666432  2233445566666666666666     777776


Q ss_pred             ec-cCCeEEEEEccC-CCCHHHHHHh------cCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccc
Q 013678          162 FD-YRNHICIVFEKL-GPSLYDFLRK------NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  233 (438)
Q Consensus       162 ~~-~~~~~~lv~e~~-~~~L~~~l~~------~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~  233 (438)
                      .. +....++++.++ -|+|..++..      ...+.++..+...++.|++.|++|||++||||.||-..|++|++.-.+
T Consensus       356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqV  435 (563)
T KOG1024|consen  356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQV  435 (563)
T ss_pred             EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeE
Confidence            54 446788889999 7999999982      122457778888999999999999999999999999999999776655


Q ss_pred             ccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh
Q 013678          234 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  313 (438)
Q Consensus       234 kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt  313 (438)
                      |++|-.+++..-+                +|+.+-..      .......||+||.+.+..|+.++|+|||||+||||+|
T Consensus       436 kltDsaLSRDLFP----------------~DYhcLGD------nEnRPvkWMslEal~n~~yssasDvWsfGVllWELmt  493 (563)
T KOG1024|consen  436 KLTDSALSRDLFP----------------GDYHCLGD------NENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMT  493 (563)
T ss_pred             EeccchhccccCc----------------ccccccCC------CCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHh
Confidence            5555444332211                11111100      0122457999999999999999999999999999998


Q ss_pred             -CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCch
Q 013678          314 -GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  392 (438)
Q Consensus       314 -g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (438)
                       |+.|+...+..+....+...                       .+                          ...+-+++
T Consensus       494 lg~~PyaeIDPfEm~~ylkdG-----------------------yR--------------------------laQP~NCP  524 (563)
T KOG1024|consen  494 LGKLPYAEIDPFEMEHYLKDG-----------------------YR--------------------------LAQPFNCP  524 (563)
T ss_pred             cCCCCccccCHHHHHHHHhcc-----------------------ce--------------------------ecCCCCCc
Confidence             99999988887776655432                       11                          12334667


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          393 GDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       393 ~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      +++..++.-||..+|++||+.+|+..
T Consensus       525 DeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  525 DELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             HHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            89999999999999999999999864

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.96  E-value=3.3e-29  Score=218.11  Aligned_cols=167  Identities=23%  Similarity=0.277  Sum_probs=123.7

Q ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCC
Q 013678          177 PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  256 (438)
Q Consensus       177 ~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~  256 (438)
                      |+|.+++..++ ..+++..++.++.||+.||+|||+++      ||+|||++.++.                        
T Consensus         1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~------------------------   49 (176)
T smart00750        1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGL------------------------   49 (176)
T ss_pred             CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccc------------------------
Confidence            68999998643 46999999999999999999999998      999999976664                        


Q ss_pred             CCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhC
Q 013678          257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE-HLAMMERVLG  335 (438)
Q Consensus       257 ~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~-~~~~i~~~~~  335 (438)
                         +++  ||++.......  ..||+.|+|||++.+..++.++|||||||++|||++|..||....... .+..+.....
T Consensus        50 ---~~~--fG~~~~~~~~~--~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~  122 (176)
T smart00750       50 ---LKL--DGSVAFKTPEQ--SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMP  122 (176)
T ss_pred             ---eee--ccceEeecccc--CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhc
Confidence               444  66655443322  268999999999999999999999999999999999999996543322 1222211110


Q ss_pred             CCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCch--hHHHHHHHHccccCCCCCCCH
Q 013678          336 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA--GDLIDLLQGLLRYDPAERLKA  413 (438)
Q Consensus       336 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~ll~~~L~~dP~~Rpta  413 (438)
                      ...                       +...                    ......+  .++.++|.+||..||.+|||+
T Consensus       123 ~~~-----------------------~~~~--------------------~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~  159 (176)
T smart00750      123 ADD-----------------------PRDR--------------------SNLESVSAARSFADFMRVCASRLPQRREAA  159 (176)
T ss_pred             cCC-----------------------cccc--------------------ccHHHHHhhhhHHHHHHHHHhcccccccCH
Confidence            000                       0000                    0000112  268999999999999999999


Q ss_pred             HHHhcCCCCCC
Q 013678          414 REALRHPFFTR  424 (438)
Q Consensus       414 ~ell~hp~f~~  424 (438)
                      .|+++|+|+..
T Consensus       160 ~~ll~~~~~~~  170 (176)
T smart00750      160 NHYLAHCRALF  170 (176)
T ss_pred             HHHHHHHHHHH
Confidence            99999999753

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.96  E-value=1.7e-27  Score=227.13  Aligned_cols=210  Identities=28%  Similarity=0.348  Sum_probs=172.6

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCC-cEEEEEEeecchhh-HHHHHHHHHHHHHHHhcCCCCcceEEeccee-ccCCeEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKY-REAAMIEIDVLQRLARHDIGGTRCVQIRNWF-DYRNHIC  169 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~-~~vaiK~~~~~~~~-~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~-~~~~~~~  169 (438)
                      +|++.++||+|+||.||+|.+..++ ..+|+|+....... ...+..|+.++..+.. .....++..+++.. ..+..-|
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~-~~~~~~~~~~~~~G~~~~~~~~   97 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEK-KNGPSHFPKLLDHGRSTEDFNF   97 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhh-hcCCCCCCEEEEeccCCCceeE
Confidence            8999999999999999999987775 67899987654222 2267889999999986 22335668888888 5778999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      |||+.+|.+|.++......+.++..++..++.|++.+|++||+.|++||||||+|+++...+.                 
T Consensus        98 iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~-----------------  160 (322)
T KOG1164|consen   98 IVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSR-----------------  160 (322)
T ss_pred             EEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCC-----------------
Confidence            999999999999987766678999999999999999999999999999999999999965420                 


Q ss_pred             cccCCCCCCCeEEecCCCCc--cc----C-----C-C-CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCC
Q 013678          250 YFKNLPKSSAIKLIDFGSTT--FE----H-----Q-D-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~--~~----~-----~-~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~  316 (438)
                           .....++|.|||+++  ..    .     . . .....||..|+++....+...+.+.|+||++.++.+++.|..
T Consensus       161 -----~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~L  235 (322)
T KOG1164|consen  161 -----SEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSL  235 (322)
T ss_pred             -----cccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCC
Confidence                 112468889999887  21    0     1 1 123469999999999999999999999999999999999999


Q ss_pred             CCCCCChHH
Q 013678          317 LFQTHENLE  325 (438)
Q Consensus       317 pf~~~~~~~  325 (438)
                      ||.+.....
T Consensus       236 PW~~~~~~~  244 (322)
T KOG1164|consen  236 PWEALEMTD  244 (322)
T ss_pred             CCccccccc
Confidence            997765433

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.96  E-value=1.2e-28  Score=211.00  Aligned_cols=208  Identities=26%  Similarity=0.367  Sum_probs=173.4

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ...++|+++++||+|+||.+|+|....+|+.||||+-.+.. ...+...|..+...|++-    ..+..+..+..+..+-
T Consensus        12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-~hpqL~yEskvY~iL~~g----~GiP~i~~y~~e~~yn   86 (341)
T KOG1163|consen   12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-KHPQLLYESKVYRILQGG----VGIPHIRHYGTEKDYN   86 (341)
T ss_pred             eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-CCcchhHHHHHHHHhccC----CCCchhhhhccccccc
Confidence            34589999999999999999999999999999999865432 234577799999988763    3446777777888899


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      .+||+++|.+|++++.-.. +.++..++..++-|++.-++|+|.+++|||||||+|+|+.-.-+                
T Consensus        87 vlVMdLLGPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh----------------  149 (341)
T KOG1163|consen   87 VLVMDLLGPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRH----------------  149 (341)
T ss_pred             eeeeeccCccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccc----------------
Confidence            9999999999999987543 57999999999999999999999999999999999999865432                


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC----------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                              ...+.|+|||+|+...+.          .....||..|.+--...+...+...|+=|+|.+|..+..|..||
T Consensus       150 --------~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPW  221 (341)
T KOG1163|consen  150 --------CNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPW  221 (341)
T ss_pred             --------cceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcc
Confidence                    336899999999764332          23358999999988888888899999999999999999999999


Q ss_pred             CCCChHHH
Q 013678          319 QTHENLEH  326 (438)
Q Consensus       319 ~~~~~~~~  326 (438)
                      ++......
T Consensus       222 Qglka~tk  229 (341)
T KOG1163|consen  222 QGLKAATK  229 (341)
T ss_pred             cccchhhH
Confidence            98655443

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.96  E-value=2.6e-28  Score=218.05  Aligned_cols=206  Identities=24%  Similarity=0.328  Sum_probs=175.6

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +.-.|+|.++||+|+||.+++|.+..+++.||||.-.. ....-++..|.+..+.|..    .++|..++-+...+.+-.
T Consensus        26 VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-kS~APQLrdEYr~YKlL~g----~~GIP~vYYFGqeG~~Ni  100 (449)
T KOG1165|consen   26 VGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-KSEAPQLRDEYRTYKLLGG----TEGIPQVYYFGQEGKYNI  100 (449)
T ss_pred             ecccceeccccccCcceeeecccccccCceEEEEeccc-cCCcchHHHHHHHHHHHcC----CCCCCceeeeccccchhh
Confidence            34679999999999999999999999999999997543 2333456778888888873    255577777778888999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||++|.+|+|++.-.+ +.|+..++..++.|++.-++|+|++.+|.|||||+|+||...+.                 
T Consensus       101 LVidLLGPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~-----------------  162 (449)
T KOG1165|consen  101 LVIDLLGPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGT-----------------  162 (449)
T ss_pred             hhhhhhCcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCC-----------------
Confidence            999999999999998654 78999999999999999999999999999999999999977552                 


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCCC----------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQDH----------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                           .+...+.|+|||+|+...+..          ....||..||+--..+|...+.+.|+=|||-+++.+|.|..||+
T Consensus       163 -----k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQ  237 (449)
T KOG1165|consen  163 -----KDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ  237 (449)
T ss_pred             -----CCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccc
Confidence                 244568999999998755433          23589999999999899999999999999999999999999998


Q ss_pred             CCCh
Q 013678          320 THEN  323 (438)
Q Consensus       320 ~~~~  323 (438)
                      +...
T Consensus       238 GLKA  241 (449)
T KOG1165|consen  238 GLKA  241 (449)
T ss_pred             cccC
Confidence            8543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=3.9e-28  Score=245.74  Aligned_cols=260  Identities=20%  Similarity=0.284  Sum_probs=185.8

Q ss_pred             Cce-EEEeeeeeecceEEEEEEECCCCcEEEEEEee----cchhh---HHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           92 PRC-KILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKY---REAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        92 ~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~----~~~~~---~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      +.| .....+|.|++|.|+.+......+.++.|.+.    .....   ...+..|+-+-..+.|+++     +..+..+.
T Consensus       317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~-----~e~l~~~~  391 (601)
T KOG0590|consen  317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNI-----IETLDIVQ  391 (601)
T ss_pred             cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCch-----hhhHHHHh
Confidence            445 45678999999988888877776666666543    21111   1114456666667777766     66666666


Q ss_pred             cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          164 YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       164 ~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      +.....-+||||.++|..++....  .++..++..+++|++.||+|||++||.|||||++|++++.+|.           
T Consensus       392 ~~~~~~~~mE~~~~Dlf~~~~~~~--~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~-----------  458 (601)
T KOG0590|consen  392 EIDGILQSMEYCPYDLFSLVMSNG--KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGI-----------  458 (601)
T ss_pred             hcccchhhhhcccHHHHHHHhccc--ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCc-----------
Confidence            555444459999339999998763  6899999999999999999999999999999999999987774           


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCC-------CcccccCCCcchhHHHhCCCCC-cchhHHHHHHHHHHHHhCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltg~  315 (438)
                                      +||+|||.+......       ....+|+..|+|||++.+..|+ ...||||.|++++.|++|+
T Consensus       459 ----------------lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~  522 (601)
T KOG0590|consen  459 ----------------LKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGR  522 (601)
T ss_pred             ----------------eEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCC
Confidence                            566666665432221       1235899999999999999987 5689999999999999999


Q ss_pred             CCCCCCChHHHHH-HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          316 ALFQTHENLEHLA-MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       316 ~pf~~~~~~~~~~-~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      .||......+... .+                             ...........             .......++..
T Consensus       523 ~~Wk~a~~~~~~~~~~-----------------------------~~~~~~~~~~~-------------~~~~~~~lp~~  560 (601)
T KOG0590|consen  523 FPWKVAKKSDNSFKTN-----------------------------NYSDQRNIFEG-------------PNRLLSLLPRE  560 (601)
T ss_pred             Cccccccccccchhhh-----------------------------ccccccccccC-------------hHHHHHhchhh
Confidence            9996543322110 00                             00000000000             01112234567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          395 LIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      .+.+|.+||++||.+|.|+++|++.+||+....
T Consensus       561 ~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~  593 (601)
T KOG0590|consen  561 TRIIIYRMLQLDPTKRITIEQILNDEWIRSIEC  593 (601)
T ss_pred             HHHHHHHHccCChhheecHHHHhhChHhhhcce
Confidence            889999999999999999999999999997643

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.94  E-value=2.1e-26  Score=219.17  Aligned_cols=169  Identities=20%  Similarity=0.188  Sum_probs=125.7

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECC-CCcEEEEEEeecc------hhhHHHHHHHHHHHHHHHhcCCCCcceE-Eecc
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSI------NKYREAAMIEIDVLQRLARHDIGGTRCV-QIRN  160 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~i~~~~iv-~~~~  160 (438)
                      .+.++|.+.+.||+|+||+||+|++.. +++.||||++...      ....+.+.+|+++|+.+.|+++     + .+++
T Consensus        15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~i-----v~~l~~   89 (365)
T PRK09188         15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGV-----VPQLLA   89 (365)
T ss_pred             cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCC-----CcEEEE
Confidence            456789999999999999999998876 6788899986522      2235668899999999999887     4 4443


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCC-CCCcEEEecCcccccCCc
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL-KPENILLVSAEYVKVPDY  238 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDl-kp~NIli~~~~~~kl~df  238 (438)
                      +    +..||||||+ |++|... ..     ..   ...++.|++.||.|||++||+|||| ||+|||++.++       
T Consensus        90 ~----~~~~LVmE~~~G~~L~~~-~~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~-------  149 (365)
T PRK09188         90 T----GKDGLVRGWTEGVPLHLA-RP-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDG-------  149 (365)
T ss_pred             c----CCcEEEEEccCCCCHHHh-Cc-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCC-------
Confidence            2    4579999999 8888632 11     11   1467899999999999999999999 99999996655       


Q ss_pred             cccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----------CcccccCCCcchhHHHhCCC------CCcchhH
Q 013678          239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----------HSYVVSTRHYRAPEVILGLG------WNYPCDL  301 (438)
Q Consensus       239 ~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~------~~~~~Di  301 (438)
                                          .++|+|||+|+.....           -.+..++..|+|||.+....      .+..+|-
T Consensus       150 --------------------~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dg  209 (365)
T PRK09188        150 --------------------EAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRI  209 (365)
T ss_pred             --------------------CEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCc
Confidence                                4566666666533221           12457888899999886432      3344666


Q ss_pred             H
Q 013678          302 W  302 (438)
Q Consensus       302 w  302 (438)
                      |
T Consensus       210 W  210 (365)
T PRK09188        210 W  210 (365)
T ss_pred             E
Confidence            5

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.93  E-value=1.8e-24  Score=206.32  Aligned_cols=259  Identities=32%  Similarity=0.462  Sum_probs=196.8

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      |.+.+.||.|+||.||++.+.   ..+++|.+.....    ....+.+|+.++..+.|+.    +++++.+.+......+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~----~i~~~~~~~~~~~~~~   74 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP----NIVKLYDFFQDEGSLY   74 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCc----ceeeEEEEEecCCEEE
Confidence            788999999999999999987   7789999865332    3667889999999999883    2399999998878899


Q ss_pred             EEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSY-RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      ++++++ +++|.+++..... ..++...+..++.|++.+|.|+|+.+++||||||+||+++..+.               
T Consensus        75 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~---------------  139 (384)
T COG0515          75 LVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGR---------------  139 (384)
T ss_pred             EEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCC---------------
Confidence            999999 8999977765421 16899999999999999999999999999999999999976541               


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCC---------CCcccccCCCcchhHHHhC---CCCCcchhHHHHHHHHHHHHhCC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQ---------DHSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~---------~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~  315 (438)
                                 .++++|||.+.....         ......||..|+|||.+.+   ..++...|+||+|++++++++|.
T Consensus       140 -----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~  208 (384)
T COG0515         140 -----------VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGL  208 (384)
T ss_pred             -----------eEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCC
Confidence                       366777776653322         1245689999999999988   57889999999999999999999


Q ss_pred             CCCCCCCh----HHHHHHHHHHhCC-CChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC
Q 013678          316 ALFQTHEN----LEHLAMMERVLGP-LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  390 (438)
Q Consensus       316 ~pf~~~~~----~~~~~~i~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (438)
                      .||.....    ......+.....+ ...                    ....                      .....
T Consensus       209 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~----------------------~~~~~  246 (384)
T COG0515         209 PPFEGEKNSSATSQTLKIILELPTPSLAS--------------------PLSP----------------------SNPEL  246 (384)
T ss_pred             CCCCCCCccccHHHHHHHHHhcCCccccc--------------------ccCc----------------------cccch
Confidence            99876653    2222222211111 000                    0000                      00011


Q ss_pred             chhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       391 ~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      ....+.+++.+|+..+|..|.+..+...++|......
T Consensus       247 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~  283 (384)
T COG0515         247 ISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKL  283 (384)
T ss_pred             hhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCccc
Confidence            2346889999999999999999999998877665443

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.93  E-value=1.2e-26  Score=235.17  Aligned_cols=251  Identities=22%  Similarity=0.353  Sum_probs=182.0

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      .|...+.||++.|=+|.+|++.+ |. |+||++-+..     ....+..+|++ ...+++|     |++.+..+......
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~p-----n~lPfqk~~~t~kA   95 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAP-----NCLPFQKVLVTDKA   95 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCC-----cccchHHHHHhhHH
Confidence            67889999999999999998754 44 9999985422     22233344554 3444554     45888888888888


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      .|||-+|...+|+|.+..+.  -+..-+.+.|+.||+.||..+|..||+|||||.+||||++-+.+.++||..-+...-.
T Consensus        96 AylvRqyvkhnLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP  173 (1431)
T KOG1240|consen   96 AYLVRQYVKHNLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLP  173 (1431)
T ss_pred             HHHHHHHHhhhhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCC
Confidence            99999999999999998765  6788889999999999999999999999999999999999999999999765543332


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCC----------C-CCcchhHHHHHHHHHHHHh-CC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL----------G-WNYPCDLWSVGCILVELCS-GE  315 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~~DiwSlG~il~ellt-g~  315 (438)
                      .+           --+||+.-.....      .-..|+|||.+...          . .+++.||||+||+++||++ |+
T Consensus       174 eD-----------NPadf~fFFDTSr------RRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~  236 (1431)
T KOG1240|consen  174 ED-----------NPADFTFFFDTSR------RRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGR  236 (1431)
T ss_pred             CC-----------CcccceEEEecCC------ceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCC
Confidence            21           1245554332221      12369999988642          2 6789999999999999998 78


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      +||.-    .++......-.                                           ..++...+...  +..+
T Consensus       237 PlF~L----SQL~aYr~~~~-------------------------------------------~~~e~~Le~Ie--d~~~  267 (1431)
T KOG1240|consen  237 PLFTL----SQLLAYRSGNA-------------------------------------------DDPEQLLEKIE--DVSL  267 (1431)
T ss_pred             CcccH----HHHHhHhccCc-------------------------------------------cCHHHHHHhCc--CccH
Confidence            88842    22221111100                                           01111111111  3378


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcC
Q 013678          396 IDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      ++||..|++.||++|.+|++.|+.
T Consensus       268 Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  268 RNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HHHHHHHHccCchhccCHHHHHHh
Confidence            999999999999999999999975

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.93  E-value=9e-27  Score=225.31  Aligned_cols=235  Identities=24%  Similarity=0.374  Sum_probs=185.0

Q ss_pred             eeeecceEEEEEEE---CCCCcEEEEEEeecchh---hHHHHHHHHHHHHHHH-hcCCCCcceEEecceeccCCeEEEEE
Q 013678          100 MGEGTFGQVVECFD---NEKKELVAIKIVRSINK---YREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus       100 lg~G~~g~V~~~~~---~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      +|.|.||.|++++.   ...+..+|+|+.++...   .......|..++..++ |+.     +++++..|+.+...++++
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f-----~v~lhyafqt~~kl~l~l   76 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPF-----LVKLHYAFQTDGKLYLIL   76 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCc-----eeeeeeeeccccchhHhh
Confidence            79999999997743   34577899998865321   1224445777777776 444     499999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ++. |++|...+....  .+.+...+.+...++.+++++|+.+|+|||+|++||+++.+|++++.||             
T Consensus        77 d~~rgg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdf-------------  141 (612)
T KOG0603|consen   77 DFLRGGDLFTRLSKEV--MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDF-------------  141 (612)
T ss_pred             hhcccchhhhccccCC--chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCc-------------
Confidence            999 889998887654  7888899999999999999999999999999999999988886555554             


Q ss_pred             cCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME  331 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~  331 (438)
                                    |.++..-..... +||..|||||++.  ....++|.||||++.++|++|..||.+    +....|.
T Consensus       142 --------------glske~v~~~~~-cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il  200 (612)
T KOG0603|consen  142 --------------GLSKEAVKEKIA-CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRIL  200 (612)
T ss_pred             --------------hhhhHhHhhhhc-ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHh
Confidence                          444432222222 8999999999998  567899999999999999999999987    4444444


Q ss_pred             HHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCC
Q 013678          332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL  411 (438)
Q Consensus       332 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rp  411 (438)
                      +..-..|.                                                  ..+..+.+++..++..+|.+|.
T Consensus       201 ~~~~~~p~--------------------------------------------------~l~~~a~~~~~~l~~r~p~nrL  230 (612)
T KOG0603|consen  201 KAELEMPR--------------------------------------------------ELSAEARSLFRQLFKRNPENRL  230 (612)
T ss_pred             hhccCCch--------------------------------------------------hhhHHHHHHHHHHHhhCHHHHh
Confidence            43333332                                                  3356788999999999999998


Q ss_pred             C-----HHHHhcCCCCCCC
Q 013678          412 K-----AREALRHPFFTRD  425 (438)
Q Consensus       412 t-----a~ell~hp~f~~~  425 (438)
                      .     +.|+++|+||+..
T Consensus       231 g~~~~~~~eik~h~f~~~i  249 (612)
T KOG0603|consen  231 GAGPDGVDEIKQHEFFQSI  249 (612)
T ss_pred             ccCcchhHHHhccchheee
Confidence            5     5899999999764

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.91  E-value=3.3e-24  Score=189.95  Aligned_cols=177  Identities=13%  Similarity=0.140  Sum_probs=127.8

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhH----HH------HHHHHHHHHHHHhcCCCCcceE
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EA------AMIEIDVLQRLARHDIGGTRCV  156 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~------~~~E~~~l~~l~~~~i~~~~iv  156 (438)
                      .+.+.++|++++.||.|+||.||++.+  ++..+|||+++......    ..      +.+|+..+.++.|+++..+...
T Consensus        26 ~~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~  103 (232)
T PRK10359         26 DDFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDF  103 (232)
T ss_pred             HHHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEe
Confidence            346789999999999999999999765  46679999996432211    11      5789999999999998443322


Q ss_pred             E---ecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcc
Q 013678          157 Q---IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY  232 (438)
Q Consensus       157 ~---~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~  232 (438)
                      .   ....+...+..+|||||+ |.+|.++.      .+++    ....+++.+|..||+.|++||||||+||+++.+| 
T Consensus       104 ~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~------~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-  172 (232)
T PRK10359        104 YLLAERKTLRYAHTYIMLIEYIEGVELNDMP------EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-  172 (232)
T ss_pred             eeecccccccccCCeEEEEEEECCccHHHhh------hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-
Confidence            1   111122345689999999 88998873      2333    2456999999999999999999999999996533 


Q ss_pred             cccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHH
Q 013678          233 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC  312 (438)
Q Consensus       233 ~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell  312 (438)
                                                 ++|+|||...........         ..++....++.++||||||+++..+.
T Consensus       173 ---------------------------i~liDfg~~~~~~e~~a~---------d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        173 ---------------------------LRIIDLSGKRCTAQRKAK---------DRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             ---------------------------EEEEECCCcccccchhhH---------HHHHHHhHhcccccccceeEeehHHH
Confidence                                       788888876544322111         11344556778999999999887654

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.91  E-value=1.2e-23  Score=191.85  Aligned_cols=202  Identities=21%  Similarity=0.258  Sum_probs=126.5

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHH----------hcCC-CCcceEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLA----------RHDI-GGTRCVQ  157 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~----------~~~i-~~~~iv~  157 (438)
                      .+...+.||.|+++.||.+++..||+.+|+|++....    ...+.+.+|.-....+.          |-.+ ..--+++
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            3466788999999999999999999999999985322    22344444443322211          1111 0011122


Q ss_pred             ecc---eeccC---C-----eEEEEEccCCCCHHHHHHh---cCCC--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 013678          158 IRN---WFDYR---N-----HICIVFEKLGPSLYDFLRK---NSYR--SFPIDLVRELGRQLLESVAFMHELRLIHTDLK  221 (438)
Q Consensus       158 ~~~---~~~~~---~-----~~~lv~e~~~~~L~~~l~~---~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  221 (438)
                      +.+   ++.-.   .     ..+++|+-+.+||.+++..   ....  .+.......+..|+++.+++||+.||+|+|||
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~  172 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK  172 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred             EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence            221   11111   1     2478899998899888652   2211  12233345566999999999999999999999


Q ss_pred             CCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCC--------
Q 013678          222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL--------  293 (438)
Q Consensus       222 p~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--------  293 (438)
                      |+|++++.+|                           .++|+||+.....+........+..|.+||.....        
T Consensus       173 ~~nfll~~~G---------------------------~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~  225 (288)
T PF14531_consen  173 PENFLLDQDG---------------------------GVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNA  225 (288)
T ss_dssp             GGGEEE-TTS----------------------------EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEE
T ss_pred             eeeEEEcCCC---------------------------CEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccc
Confidence            9999998777                           45666665544443332222445779999987542        


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          294 GWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       294 ~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                      .++.+.|.|+||+++|.|++|..||...
T Consensus       226 ~~t~~~DaW~LG~~ly~lWC~~lPf~~~  253 (288)
T PF14531_consen  226 PYTFATDAWQLGITLYSLWCGRLPFGLS  253 (288)
T ss_dssp             EE-HHHHHHHHHHHHHHHHHSS-STCCC
T ss_pred             eeeeccCHHHHHHHHHHHHHccCCCCCC
Confidence            4789999999999999999999999754

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.90  E-value=1.6e-24  Score=219.68  Aligned_cols=238  Identities=26%  Similarity=0.422  Sum_probs=168.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      ...|..++.|..|+||.||+++++.+.+.+|+|+ ++.+.          |++.     |     ..+-+      ..+.
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l----------ilRn-----i-----lt~a~------npfv  134 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL----------ILRN-----I-----LTFAG------NPFV  134 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhcc-cccch----------hhhc-----c-----ccccC------Ccce
Confidence            4668999999999999999999999999999964 32211          1110     1     11111      1112


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       171 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |     |+=...++.-+  .++..        ++.+++|||+.||+|||+||+|.+|+.-|++|++|||+.+........
T Consensus       135 v-----gDc~tllk~~g--~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at  199 (1205)
T KOG0606|consen  135 V-----GDCATLLKNIG--PLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT  199 (1205)
T ss_pred             e-----chhhhhcccCC--CCcch--------hhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence            2     33334443322  34432        278999999999999999999999999999999888886543322110


Q ss_pred             ccCCCCCCCeEEecCCCCcccCC-CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM  329 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~  329 (438)
                              ..|=+  ++....++ .....+||+.|+|||++....|+..+|+|++|+|+||.+-|..||.++...+.+..
T Consensus       200 --------nl~eg--~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~  269 (1205)
T KOG0606|consen  200 --------NLKEG--HIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQ  269 (1205)
T ss_pred             --------hhhhc--chHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhh
Confidence                    00100  00111111 11235899999999999999999999999999999999999999999988888777


Q ss_pred             HHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCC
Q 013678          330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  409 (438)
Q Consensus       330 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  409 (438)
                      +.....                        .||+.                       .....++++++|.++|+.+|..
T Consensus       270 visd~i------------------------~wpE~-----------------------dea~p~Ea~dli~~LL~qnp~~  302 (1205)
T KOG0606|consen  270 VISDDI------------------------EWPEE-----------------------DEALPPEAQDLIEQLLRQNPLC  302 (1205)
T ss_pred             hhhhhc------------------------ccccc-----------------------CcCCCHHHHHHHHHHHHhChHh
Confidence            665433                        33331                       1244678999999999999999


Q ss_pred             CC---CHHHHhcCCCCCCCCC
Q 013678          410 RL---KAREALRHPFFTRDVR  427 (438)
Q Consensus       410 Rp---ta~ell~hp~f~~~~~  427 (438)
                      |.   .+-++.+|+||+.-..
T Consensus       303 Rlgt~ga~evk~h~ff~~LDw  323 (1205)
T KOG0606|consen  303 RLGTGGALEVKQHGFFQLLDW  323 (1205)
T ss_pred             hcccchhhhhhhccceeeccc
Confidence            97   5888999999987543

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.90  E-value=2.3e-23  Score=182.52  Aligned_cols=138  Identities=22%  Similarity=0.229  Sum_probs=106.9

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeecchh---h------------------------HHHHHHHHHHHHHHHhcC
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---Y------------------------REAAMIEIDVLQRLARHD  149 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~------------------------~~~~~~E~~~l~~l~~~~  149 (438)
                      ...||+|+||.||+|.+. +|+.||||+++....   .                        .....+|+.++..+.+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            467999999999999986 899999999975321   0                        122345999999999988


Q ss_pred             CCCcceEEecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HhCCceecCCCCCcEEE
Q 013678          150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM-HELRLIHTDLKPENILL  227 (438)
Q Consensus       150 i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~L-H~~~ivHrDlkp~NIli  227 (438)
                      +..|.++..      .. .+|||||+ |++|...+...  ..++...+..++.|++.+|.++ |+.||+||||||+|||+
T Consensus        81 v~~p~~~~~------~~-~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli  151 (190)
T cd05147          81 IPCPEPILL------KS-HVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLY  151 (190)
T ss_pred             CCCCcEEEe------cC-CEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence            755554321      11 37999999 66665543332  3689999999999999999999 79999999999999999


Q ss_pred             ecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccC
Q 013678          228 VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH  272 (438)
Q Consensus       228 ~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  272 (438)
                      +. +                           .++|+|||+|....
T Consensus       152 ~~-~---------------------------~v~LiDFG~a~~~~  168 (190)
T cd05147         152 HD-G---------------------------KLYIIDVSQSVEHD  168 (190)
T ss_pred             EC-C---------------------------cEEEEEccccccCC
Confidence            62 2                           58999999987543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1.4e-23  Score=192.13  Aligned_cols=189  Identities=21%  Similarity=0.299  Sum_probs=142.4

Q ss_pred             CCcceEEecceecc---------------------------CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHH
Q 013678          151 GGTRCVQIRNWFDY---------------------------RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL  203 (438)
Q Consensus       151 ~~~~iv~~~~~~~~---------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi  203 (438)
                      .|||||++...|.+                           +..+|+||.-+..+|.+++..+.   .+....+-++.|+
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~---~s~r~~~~~laQl  350 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH---RSYRTGRVILAQL  350 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC---CchHHHHHHHHHH
Confidence            57888999988753                           23689999999999999998764   7788889999999


Q ss_pred             HHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC---------C
Q 013678          204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ---------D  274 (438)
Q Consensus       204 ~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---------~  274 (438)
                      ++|+.|||++||.|||+|.+|||+.-+.                       |.-..+.|+|||++--.+.         .
T Consensus       351 LEav~hL~~hgvAhRDlKSDNiL~Eldd-----------------------D~~P~LVvaDFGCcLAd~~hGlqlpy~S~  407 (598)
T KOG4158|consen  351 LEAVTHLHKHGVAHRDLKSDNILLELDD-----------------------DEIPQLVVADFGCCLADDNHGLQLPYESD  407 (598)
T ss_pred             HHHHHHHHHccchhhcccccceEEEecC-----------------------CCCcEEEEcccceeeeccccccccccccc
Confidence            9999999999999999999999996543                       3345688999998743222         1


Q ss_pred             CcccccCCCcchhHHHhCCC-----C-CcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhh
Q 013678          275 HSYVVSTRHYRAPEVILGLG-----W-NYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRR  348 (438)
Q Consensus       275 ~~~~~gt~~y~aPE~~~~~~-----~-~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~  348 (438)
                      ....-|...-||||+....+     . -.++|.|+.|.+.||+++...||.+......-..-                  
T Consensus       408 ~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~------------------  469 (598)
T KOG4158|consen  408 EVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT------------------  469 (598)
T ss_pred             cccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh------------------
Confidence            12245788899999987543     1 25899999999999999999999763321100000                  


Q ss_pred             hhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCH
Q 013678          349 AEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKA  413 (438)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta  413 (438)
                          +.                          .......++.+++.+++|+..+|+.||++|+++
T Consensus       470 ----Yq--------------------------e~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp  504 (598)
T KOG4158|consen  470 ----YQ--------------------------ESQLPALPSRVPPVARQLVFDLLKRDPSKRVSP  504 (598)
T ss_pred             ----hh--------------------------hhhCCCCcccCChHHHHHHHHHhcCCccccCCc
Confidence                00                          000112334667889999999999999999984

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.89  E-value=2.4e-22  Score=176.74  Aligned_cols=137  Identities=20%  Similarity=0.151  Sum_probs=105.8

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeecchhh---------------------------HHHHHHHHHHHHHHHhcC
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY---------------------------REAAMIEIDVLQRLARHD  149 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~~E~~~l~~l~~~~  149 (438)
                      .+.||+|+||.||+|.+. +|+.||||+++.....                           .....+|...+.++.+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            468999999999999987 8999999998753110                           122357999999999998


Q ss_pred             CCCcceEEecceeccCCeEEEEEccC-CCCHHHH-HHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEE
Q 013678          150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDF-LRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENIL  226 (438)
Q Consensus       150 i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~-l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIl  226 (438)
                      +..+..+..     .  ..||||||+ |+++... +..   ..++...+..++.|++.+|.++|+ +||+||||||+|||
T Consensus        81 i~~p~~~~~-----~--~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIl  150 (190)
T cd05145          81 VPVPEPILL-----K--KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNIL  150 (190)
T ss_pred             CCCceEEEe-----c--CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEE
Confidence            744444321     1  248999999 6544433 333   257888999999999999999999 99999999999999


Q ss_pred             EecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccC
Q 013678          227 LVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH  272 (438)
Q Consensus       227 i~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  272 (438)
                      ++ ++                           .++|+|||++....
T Consensus       151 l~-~~---------------------------~~~liDFG~a~~~~  168 (190)
T cd05145         151 YH-DG---------------------------KPYIIDVSQAVELD  168 (190)
T ss_pred             EE-CC---------------------------CEEEEEcccceecC
Confidence            96 33                           57888888887654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK10345 hypothetical protein; Provisional

Probab=99.89  E-value=3.1e-22  Score=177.03  Aligned_cols=126  Identities=21%  Similarity=0.241  Sum_probs=102.9

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC---e-EEEE
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN---H-ICIV  171 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~---~-~~lv  171 (438)
                      .+.||+|+||.||.  +..++.. +||++... ....+.+.+|+.+++.+.|.+..|+||++++++++++.   . +.+|
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            46799999999995  6677665 69988653 23456789999999999988888899999999999863   4 4489


Q ss_pred             Ecc--C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHH-HHHHhCCceecCCCCCcEEEecC
Q 013678          172 FEK--L-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV-AFMHELRLIHTDLKPENILLVSA  230 (438)
Q Consensus       172 ~e~--~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL-~~LH~~~ivHrDlkp~NIli~~~  230 (438)
                      |||  + +++|.+++.+.   .+++.  ..++.|++.++ +|||+++|+||||||+|||++..
T Consensus        84 ~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~  141 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRI  141 (210)
T ss_pred             ecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEecc
Confidence            999  4 58999999663   36655  36688888888 99999999999999999999754

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.88  E-value=4.3e-22  Score=172.69  Aligned_cols=181  Identities=15%  Similarity=0.123  Sum_probs=133.9

Q ss_pred             EEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHH-----HHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE-----AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      +...|++|+||+||++..  .+.+++.+.+.......+     .+.+|+++|++|.|+    +++++++++    +..++
T Consensus         6 ~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~----~~vP~ll~~----~~~~l   75 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGL----PRTPRLLHW----DGRHL   75 (218)
T ss_pred             cceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCC----CCCCEEEEE----cCEEE
Confidence            567899999999998864  677888887765444222     578999999999763    233666664    34699


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCC-CCCcEEEecCcccccCCccccccCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL-KPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDl-kp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +|||+ |.+|.+.+..        . ...++.|++.+|+++|++||+|||| ||+|||++.+|                 
T Consensus        76 vmeyI~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g-----------------  129 (218)
T PRK12274         76 DRSYLAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDG-----------------  129 (218)
T ss_pred             EEeeecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCC-----------------
Confidence            99999 8888754321        1 1357889999999999999999999 79999997655                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCCc----------------ccccCCCcchhHHHhCC-CCC-cchhHHHHHHHHHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDHS----------------YVVSTRHYRAPEVILGL-GWN-YPCDLWSVGCILVE  310 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~----------------~~~gt~~y~aPE~~~~~-~~~-~~~DiwSlG~il~e  310 (438)
                                .++|+|||+|........                ....++.|++|+...-. ..+ ...++++.|+-+|.
T Consensus       130 ----------~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~  199 (218)
T PRK12274        130 ----------SPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYR  199 (218)
T ss_pred             ----------CEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHH
Confidence                      467777777764433221                02357889999865433 334 66788999999999


Q ss_pred             HHhCCCCCCCCC
Q 013678          311 LCSGEALFQTHE  322 (438)
Q Consensus       311 lltg~~pf~~~~  322 (438)
                      ++|+..++.++.
T Consensus       200 ~~~~~~~~~~~~  211 (218)
T PRK12274        200 FVTRRVLHWEDN  211 (218)
T ss_pred             HHhccCCccccC
Confidence            999999886543

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.88  E-value=3e-23  Score=181.03  Aligned_cols=240  Identities=16%  Similarity=0.191  Sum_probs=185.4

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      ..++-+|.+...|..|+|++.  |..++.|+++-   .....++|..|.-.|+.+.||||     +.+++.+....++.+
T Consensus       192 lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpni-----lpvlgacnsppnlv~  264 (448)
T KOG0195|consen  192 LNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNI-----LPVLGACNSPPNLVI  264 (448)
T ss_pred             hhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCch-----hhhhhhccCCCCceE
Confidence            456778999999999999865  44477787752   23445678889999999999888     999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      +..|| -|+|+.+++.......+..++.+++.+|++|++|||+..  |.---|....++|+++-+.+|            
T Consensus       265 isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltari------------  332 (448)
T KOG0195|consen  265 ISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARI------------  332 (448)
T ss_pred             eeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhe------------
Confidence            99999 999999999887677888999999999999999999865  444568888999987654433            


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCC---CcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW---NYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                   ..+|--++...    ....-.+.||+||.+...+-   -.++|+|||++++|||.|...||...+..
T Consensus       333 -------------smad~kfsfqe----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspm  395 (448)
T KOG0195|consen  333 -------------SMADTKFSFQE----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPM  395 (448)
T ss_pred             -------------ecccceeeeec----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCch
Confidence                         33332222111    11234788999999987653   36899999999999999999999887776


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +.-.+|.                                                ++.+....++.++..+..|+.-|+.
T Consensus       396 ecgmkia------------------------------------------------leglrv~ippgis~hm~klm~icmn  427 (448)
T KOG0195|consen  396 ECGMKIA------------------------------------------------LEGLRVHIPPGISRHMNKLMNICMN  427 (448)
T ss_pred             hhhhhhh------------------------------------------------hccccccCCCCccHHHHHHHHHHhc
Confidence            6443331                                                1122233455678899999999999


Q ss_pred             cCCCCCCCHHHHh
Q 013678          405 YDPAERLKAREAL  417 (438)
Q Consensus       405 ~dP~~Rpta~ell  417 (438)
                      .||.+||.++.++
T Consensus       428 edpgkrpkfdmiv  440 (448)
T KOG0195|consen  428 EDPGKRPKFDMIV  440 (448)
T ss_pred             CCCCcCCCcceeh
Confidence            9999999987654

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.84  E-value=7.3e-22  Score=187.91  Aligned_cols=243  Identities=25%  Similarity=0.330  Sum_probs=158.8

Q ss_pred             ceEEEeeeeeecceEEEEEEECCC---CcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecc-------e
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRN-------W  161 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~-------~  161 (438)
                      .+.+.+..+..+++.+...+...+   .+.++-|..+... .......+++-.+....|++.     ..+.+       .
T Consensus       245 s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~-----s~~~d~~~s~~~~  319 (516)
T KOG1033|consen  245 SSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNR-----SILEDLRPSLFES  319 (516)
T ss_pred             cccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCc-----ccccCCCCchhhh
Confidence            345556666666666655543333   3334444333322 233344456655555555543     22222       1


Q ss_pred             ec-----cCCeEEEEEccC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 013678          162 FD-----YRNHICIVFEKL-GPSLYDFLRKN-SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  234 (438)
Q Consensus       162 ~~-----~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  234 (438)
                      +.     ...++||.|++| ..+|.++|..+ .....+......++.|++.|++|   +|.+|+|+||.||++..++.  
T Consensus       320 ~~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q--  394 (516)
T KOG1033|consen  320 SKRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQ--  394 (516)
T ss_pred             ccccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchh--
Confidence            11     123689999999 99999999743 33557788899999999999999   99999999999999976654  


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC---------CCcccccCCCcchhHHHhCCCCCcchhHHHHH
Q 013678          235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ---------DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG  305 (438)
Q Consensus       235 l~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  305 (438)
                                               +||+|||+......         ..+.-+||..||+||.+.+..|+.++||||||
T Consensus       395 -------------------------~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLG  449 (516)
T KOG1033|consen  395 -------------------------LKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALG  449 (516)
T ss_pred             -------------------------hhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHH
Confidence                                     45555555443222         22345899999999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHHH-hCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhh
Q 013678          306 CILVELCS-GEALFQTHENLEHLAMMERV-LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL  383 (438)
Q Consensus       306 ~il~ellt-g~~pf~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (438)
                      +||+|++. =...|      +....+..+ -|.+|+.++.                                        
T Consensus       450 lil~EL~~~f~T~~------er~~t~~d~r~g~ip~~~~~----------------------------------------  483 (516)
T KOG1033|consen  450 LILAELLIQFSTQF------ERIATLTDIRDGIIPPEFLQ----------------------------------------  483 (516)
T ss_pred             HHHHHHHHHhccHH------HHHHhhhhhhcCCCChHHhh----------------------------------------
Confidence            99999997 22222      111111111 1222221110                                        


Q ss_pred             hhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q 013678          384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT  423 (438)
Q Consensus       384 ~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~  423 (438)
                            + .++-.+|+.+||...|.+||++.+.--|.|.+
T Consensus       484 ------d-~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~~  516 (516)
T KOG1033|consen  484 ------D-YPEEYTLLQQLLSPSPEERPSAIEVALHEFLQ  516 (516)
T ss_pred             ------c-CcHHHHHHHHhcCCCcccCchHHHHhhhhhcC
Confidence                  1 12446899999999999999998888888753

>smart00090 RIO RIO-like kinase

Probab=99.84  E-value=1.4e-20  Score=170.62  Aligned_cols=142  Identities=23%  Similarity=0.181  Sum_probs=108.6

Q ss_pred             eEEEeeeeeecceEEEEEE-ECCCCcEEEEEEeecchh-------------------------hHHHHHHHHHHHHHHHh
Q 013678           94 CKILSKMGEGTFGQVVECF-DNEKKELVAIKIVRSINK-------------------------YREAAMIEIDVLQRLAR  147 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~-------------------------~~~~~~~E~~~l~~l~~  147 (438)
                      |.+.+.||+|+||.||+|. +..+|+.||||+++....                         ....+.+|+.++.++.+
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~  109 (237)
T smart00090       30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE  109 (237)
T ss_pred             HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            7889999999999999998 667899999999874321                         11235689999999987


Q ss_pred             cCCCCcceEEecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCCCCcE
Q 013678          148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR-LIHTDLKPENI  225 (438)
Q Consensus       148 ~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NI  225 (438)
                      ..+..   .+++++    ...+|||||+ |.+|.......  ..+....+..++.||+.+|.+||++| |+||||||+||
T Consensus       110 ~~i~~---p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NI  180 (237)
T smart00090      110 AGVPV---PKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNI  180 (237)
T ss_pred             cCCCC---CeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhE
Confidence            54422   333332    1248999999 66776654322  24666678899999999999999999 99999999999


Q ss_pred             EEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccC
Q 013678          226 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH  272 (438)
Q Consensus       226 li~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  272 (438)
                      +++ ++                           .++|+|||.+....
T Consensus       181 li~-~~---------------------------~i~LiDFg~a~~~~  199 (237)
T smart00090      181 LVH-DG---------------------------KVVIIDVSQSVELD  199 (237)
T ss_pred             EEE-CC---------------------------CEEEEEChhhhccC
Confidence            996 33                           58899999876543

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=8.2e-21  Score=196.42  Aligned_cols=199  Identities=26%  Similarity=0.384  Sum_probs=153.4

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      ...|.|.+.||+|+||.||+|.... |+.||||+-+.....  ++..-.+++.+|+ +-+ -+-+..+...+...+.-+|
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W--EfYI~~q~~~RLk-~~~-~~~~~~~~~a~~~~~~S~l  771 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW--EFYICLQVMERLK-PQM-LPSIMHISSAHVFQNASVL  771 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce--eeeehHHHHHhhc-hhh-hcchHHHHHHHccCCccee
Confidence            4679999999999999999999876 999999986543221  1111222333443 110 0222566666666778899


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      |+||. .|+|.+++...  +.+++..+..+..||+.-+++||.++|||+||||+|+||...-   ..|            
T Consensus       772 v~ey~~~Gtlld~~N~~--~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~---~~~------------  834 (974)
T KOG1166|consen  772 VSEYSPYGTLLDLINTN--KVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREI---CAD------------  834 (974)
T ss_pred             eeeccccccHHHhhccC--CCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeeccc---CCC------------
Confidence            99999 99999999843  5899999999999999999999999999999999999995421   111            


Q ss_pred             cccCCCCCCCeEEecCCCCcccCC-----CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCC
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~  316 (438)
                           .....++|+|||.+..+.-     .....++|-.+--+|+..|.++++.+|.|.|+.+++.||.|+.
T Consensus       835 -----~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  835 -----SDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             -----CcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence                 1244689999999865321     1233578999999999999999999999999999999999863

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.81  E-value=7.4e-19  Score=157.56  Aligned_cols=132  Identities=25%  Similarity=0.307  Sum_probs=104.8

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch---------hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      +.||+|++|.||+|.+  .|..|++|+.....         .....+.+|+.++..+.|+++..|.+     ++.+.+..
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~-----~~~~~~~~   74 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAV-----YFVDPENF   74 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeE-----EEEeCCCC
Confidence            5789999999999986  66779999864311         11245778999999999988744433     23345678


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      ++||||+ |++|.+++....     . ....++.+++.+|.++|+.|++|||++|+|||++ ++                
T Consensus        75 ~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~----------------  131 (211)
T PRK14879         75 IIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GG----------------  131 (211)
T ss_pred             EEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CC----------------
Confidence            8999999 899999986532     2 7889999999999999999999999999999996 33                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcc
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTF  270 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~  270 (438)
                                 .++|+|||.+..
T Consensus       132 -----------~~~liDf~~a~~  143 (211)
T PRK14879        132 -----------KIYLIDFGLAEF  143 (211)
T ss_pred             -----------CEEEEECCcccC
Confidence                       578888888765

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.78  E-value=2e-18  Score=153.05  Aligned_cols=136  Identities=25%  Similarity=0.244  Sum_probs=103.3

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-----------------------hhHHHHHHHHHHHHHHHhcCC
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------------------KYREAAMIEIDVLQRLARHDI  150 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------------------~~~~~~~~E~~~l~~l~~~~i  150 (438)
                      |.+.+.||+|+||.||++... +|+.||||+++...                       .......+|+.++..+.+.++
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            788899999999999999874 79999999876421                       011235679999999988754


Q ss_pred             CCcceEEecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 013678          151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  229 (438)
Q Consensus       151 ~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  229 (438)
                      ..   ...++    ....++||||+ |++|.+....        .....++.+++.++.++|+.||+||||||+||+++.
T Consensus        96 ~v---~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~  160 (198)
T cd05144          96 PV---PKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDD  160 (198)
T ss_pred             CC---Cceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcC
Confidence            22   33332    13458999999 8888765321        345678899999999999999999999999999965


Q ss_pred             CcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccC
Q 013678          230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH  272 (438)
Q Consensus       230 ~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  272 (438)
                      ++                           .++|+|||++....
T Consensus       161 ~~---------------------------~~~liDfg~~~~~~  176 (198)
T cd05144         161 DE---------------------------KIYIIDWPQMVSTD  176 (198)
T ss_pred             CC---------------------------cEEEEECCccccCC
Confidence            44                           67888888875443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.78  E-value=3e-18  Score=152.17  Aligned_cols=129  Identities=22%  Similarity=0.252  Sum_probs=99.7

Q ss_pred             eeeeecceEEEEEEECCCCcEEEEEEeecch---------hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           99 KMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      .||+|+||.||+|.  .++..|++|+.....         .....+.+|+.++..+.++++..|.+   +.  ...+..+
T Consensus         1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~---~~--~~~~~~~   73 (199)
T TIGR03724         1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVV---YD--VDPDNKT   73 (199)
T ss_pred             CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE---EE--EECCCCE
Confidence            37999999999998  456789999864311         11255678999999999987643333   22  2345578


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ |++|.+++....   .      .++.|++.+|.+||+.|++|+|++|+||+++ ++                 
T Consensus        74 lv~e~~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~-----------------  126 (199)
T TIGR03724        74 IVMEYIEGKPLKDVIEEGN---D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DD-----------------  126 (199)
T ss_pred             EEEEEECCccHHHHHhhcH---H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CC-----------------
Confidence            999999 999999876532   1      7899999999999999999999999999996 33                 


Q ss_pred             CcccCCCCCCCeEEecCCCCccc
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFE  271 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~  271 (438)
                                .++++|||.+...
T Consensus       127 ----------~~~liDfg~a~~~  139 (199)
T TIGR03724       127 ----------KLYLIDFGLGKYS  139 (199)
T ss_pred             ----------cEEEEECCCCcCC
Confidence                      5788888887653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.75  E-value=4.3e-18  Score=165.29  Aligned_cols=198  Identities=20%  Similarity=0.290  Sum_probs=142.8

Q ss_pred             HHHhcCCCCcceEEecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-eecCCC
Q 013678          144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL-IHTDLK  221 (438)
Q Consensus       144 ~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-vHrDlk  221 (438)
                      .+.|.|+     .++++.+.++...++|.+|| .|+|.|.+.... ..+++.....++++|+.||.|||+..| .|+.|+
T Consensus         3 ~l~h~n~-----~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~-~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~   76 (484)
T KOG1023|consen    3 QLDHDNL-----NKFIGASVDGPEMIVIWEYCSRGSLLDILSNED-IKLDYFFILSFIRDISKGLAYLHNSPIGYHGALK   76 (484)
T ss_pred             ccchhhh-----hhheeeEecCCceEEEEeeecCccHHhHHhccc-cCccHHHHHHHHHHHHHHHHHHhcCcceeeeeec
Confidence            4555555     99999999999999999999 999999998743 568888889999999999999998766 999999


Q ss_pred             CCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC-----CCcccccCCCcchhHHHhCCC--
Q 013678          222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLG--  294 (438)
Q Consensus       222 p~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~--  294 (438)
                      ..|++++..-                           .+||.|||+......     ......-...|.|||.+.+..  
T Consensus        77 s~nClvd~~w---------------------------~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~  129 (484)
T KOG1023|consen   77 SSNCLVDSRW---------------------------VLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQ  129 (484)
T ss_pred             cccceeeeeE---------------------------EEEechhhhcccccccccccccchhHHHHhccCHHHhcccccc
Confidence            9999997655                           456666665554421     111122345699999998742  


Q ss_pred             -----CCcchhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCC
Q 013678          295 -----WNYPCDLWSVGCILVELCSGEALFQTHEN----LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA  365 (438)
Q Consensus       295 -----~~~~~DiwSlG~il~elltg~~pf~~~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (438)
                           .+.+.||||||++++|+++...||.....    .+.+..+.. .+..+.                  +       
T Consensus       130 ~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~-~~~~~~------------------r-------  183 (484)
T KOG1023|consen  130 SLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK-GGSNPF------------------R-------  183 (484)
T ss_pred             cccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh-cCCCCc------------------C-------
Confidence                 36779999999999999999999975322    222222222 010000                  0       


Q ss_pred             CChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHh
Q 013678          366 TSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL  417 (438)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell  417 (438)
                                     +..  ....+..+++..++.+||..+|.+||+++++-
T Consensus       184 ---------------P~i--~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~  218 (484)
T KOG1023|consen  184 ---------------PSI--ELLNELPPELLLLVARCWEEIPEKRPSIEQIR  218 (484)
T ss_pred             ---------------cch--hhhhhcchHHHHHHHHhcccChhhCccHHHHH
Confidence                           000  00013344789999999999999999998875

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.75  E-value=1.1e-17  Score=170.39  Aligned_cols=141  Identities=23%  Similarity=0.216  Sum_probs=106.2

Q ss_pred             cCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEee-c---ch-----hhHHHHHHHHHHHHHHHhcCCCCcceE
Q 013678           86 IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR-S---IN-----KYREAAMIEIDVLQRLARHDIGGTRCV  156 (438)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~-~---~~-----~~~~~~~~E~~~l~~l~~~~i~~~~iv  156 (438)
                      ..+.....|...+.||+|+||.||++.+...  .+++|+.. +   ..     ...+.+.+|++++..+.|+++     +
T Consensus       327 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i-----~  399 (535)
T PRK09605        327 KEEEVKRRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGV-----P  399 (535)
T ss_pred             cccccccccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCC-----C
Confidence            3344455667789999999999999986543  34444321 1   11     123557789999999999887     4


Q ss_pred             EecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccccc
Q 013678          157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV  235 (438)
Q Consensus       157 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl  235 (438)
                      ....+..+....++||||+ |++|.+++.          ....++.|++.+|.+||++||+||||||+|||++ ++    
T Consensus       400 ~p~~~~~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~-~~----  464 (535)
T PRK09605        400 TPVIYDVDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR-DD----  464 (535)
T ss_pred             eeEEEEEeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE-CC----
Confidence            4444444556678999999 999999875          3467899999999999999999999999999993 22    


Q ss_pred             CCccccccCCCCCCcccCCCCCCCeEEecCCCCccc
Q 013678          236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE  271 (438)
Q Consensus       236 ~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  271 (438)
                                             .++|+|||+++..
T Consensus       465 -----------------------~~~liDFGla~~~  477 (535)
T PRK09605        465 -----------------------RLYLIDFGLGKYS  477 (535)
T ss_pred             -----------------------cEEEEeCcccccC
Confidence                                   5788999988653

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.74  E-value=9.8e-20  Score=184.78  Aligned_cols=256  Identities=20%  Similarity=0.293  Sum_probs=188.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECC-CCcEEEEEEeecch---hhHHHHHHHHHHHHHHH-hcCCCCcceEEecceeccCC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSIN---KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ..|.+.+.||+|+|+.|-++.... ....+|.|.+....   ...+....|..+-+.+. |.|+     +.+++...+..
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~-----~~~~~~~~~~~   94 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNT-----VHMIEPSSSPR   94 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccc-----cccCCccCCCc
Confidence            346788889999999998887643 44557777665432   23344445777777776 6665     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCceecCCCCCcEEEecCc-ccccCCcccccc
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAE-YVKVPDYKFLSR  243 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~NIli~~~~-~~kl~df~l~~~  243 (438)
                      ..+++++|. |+++.+.+........+...+..++.|+..+|.|+| ..++.|+||||+|.+++..+ ..++        
T Consensus        95 ~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~--------  166 (601)
T KOG0590|consen   95 SYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKI--------  166 (601)
T ss_pred             ccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccC--------
Confidence            999999999 999998884222225777888999999999999999 99999999999999998776 5544        


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCC-C-----Cccccc-CCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHhCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-D-----HSYVVS-TRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~-----~~~~~g-t~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~  315 (438)
                                         .|||+|..... .     ....+| ++.|+|||...+.. ..+..|+||+|+++.-+++|.
T Consensus       167 -------------------~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~  227 (601)
T KOG0590|consen  167 -------------------ADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGE  227 (601)
T ss_pred             -------------------CCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCC
Confidence                               45554443222 1     112467 99999999998854 568899999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      .|+......+..                              ...|.+..               .......+...+...
T Consensus       228 ~p~~~~~~~~~~------------------------------~~~~~~~~---------------~~~~~~~~~~~~~~~  262 (601)
T KOG0590|consen  228 LPWDFPSRKDGR------------------------------YSSWKSNK---------------GRFTQLPWNSISDQA  262 (601)
T ss_pred             CCcccccccccc------------------------------ceeecccc---------------cccccCccccCChhh
Confidence            998654332210                              00111100               000111234556688


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          396 IDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      .+++.++|..+|..|.+.+++..++|+..
T Consensus       263 ~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  263 HDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             hhcccccccCCchhccccccccccccccc
Confidence            89999999999999999999999999998

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.73  E-value=3.5e-17  Score=143.79  Aligned_cols=136  Identities=26%  Similarity=0.248  Sum_probs=95.1

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeecchhh---HH----------------------HHHHHHHHHHHHHhcCCC
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY---RE----------------------AAMIEIDVLQRLARHDIG  151 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~----------------------~~~~E~~~l~~l~~~~i~  151 (438)
                      .+.||+|+||.||+|.+. +++.||||+++.....   ..                      ....|...+..+.+..+.
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~   80 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP   80 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence            467999999999999976 7899999998643211   11                      113577777777766532


Q ss_pred             CcceEEecceeccCCeEEEEEccC-CCCHH-HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEe
Q 013678          152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLY-DFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLV  228 (438)
Q Consensus       152 ~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~-~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~  228 (438)
                      .   .+.++.    ...++||||+ ++++. ..+....   .. ..+..++.+++.++.++|. +||+||||||+||+++
T Consensus        81 ~---~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~  149 (187)
T cd05119          81 V---PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD  149 (187)
T ss_pred             C---CceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE
Confidence            2   222222    2358999999 63322 1121111   11 6678999999999999999 9999999999999996


Q ss_pred             cCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccC
Q 013678          229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH  272 (438)
Q Consensus       229 ~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  272 (438)
                       ++                           .++|+|||.+....
T Consensus       150 -~~---------------------------~~~liDfg~a~~~~  165 (187)
T cd05119         150 -DG---------------------------KVYIIDVPQAVEID  165 (187)
T ss_pred             -CC---------------------------cEEEEECccccccc
Confidence             43                           57888888876543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.71  E-value=4.6e-17  Score=158.20  Aligned_cols=261  Identities=20%  Similarity=0.244  Sum_probs=189.4

Q ss_pred             CccCCceEEEeeeee--ecceEEEEEEE--CCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecc
Q 013678           88 ENLTPRCKILSKMGE--GTFGQVVECFD--NEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~--G~~g~V~~~~~--~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~  160 (438)
                      ..+..++.+.+.+|.  |.+|.||.+..  ..++..+|+|.-+.-   ......-.+|+.....+.    .|++.++.+.
T Consensus       110 s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~----~~~~~v~~~~  185 (524)
T KOG0601|consen  110 SFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKID----SHENPVRDSP  185 (524)
T ss_pred             chhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccC----ccccccccCc
Confidence            345567888999999  99999999988  888999999974321   112222334444433332    2356688888


Q ss_pred             eeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHH----HHHHHHhCCceecCCCCCcEEEecC-ccccc
Q 013678          161 WFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE----SVAFMHELRLIHTDLKPENILLVSA-EYVKV  235 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~----aL~~LH~~~ivHrDlkp~NIli~~~-~~~kl  235 (438)
                      .++..+..++-+|+|+.+|..+..... ..++...++.++.+...    ||.++|+.+|+|-|+||+||++..+ ..+++
T Consensus       186 ~~e~~~~lfiqtE~~~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~  264 (524)
T KOG0601|consen  186 AWEGSGILFIQTELCGESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKL  264 (524)
T ss_pred             ccccCCcceeeeccccchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeec
Confidence            999999999999999999999887654 35888999999999999    9999999999999999999999888 77777


Q ss_pred             CCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCC
Q 013678          236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       236 ~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~  315 (438)
                      .||+++.                  +|+|.+++...... ....|..-|++||...+ -++.+.||+++|.++.+..++.
T Consensus       265 ~df~~v~------------------~i~~~~~~~~~~~~-~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~  324 (524)
T KOG0601|consen  265 TDFGLVS------------------KISDGNFSSVFKVS-KRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGS  324 (524)
T ss_pred             CCcceeE------------------EccCCccccceeee-ecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhc
Confidence            7777643                  33443333322221 11245667999998755 5688999999999999999987


Q ss_pred             CCCCCC--ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchh
Q 013678          316 ALFQTH--ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  393 (438)
Q Consensus       316 ~pf~~~--~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (438)
                      .+....  +...++..+                                                   ....+.....+.
T Consensus       325 ~~~~~g~~~~W~~~r~~---------------------------------------------------~ip~e~~~~~s~  353 (524)
T KOG0601|consen  325 HLPSVGKNSSWSQLRQG---------------------------------------------------YIPLEFCEGGSS  353 (524)
T ss_pred             ccccCCCCCCccccccc---------------------------------------------------cCchhhhcCcch
Confidence            766432  111111100                                                   011111223345


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      .+...+..|++.+|..|++++.+++|+++..
T Consensus       354 ~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  354 SLRSVTSQMLDEDPRLRLTAQILTALNVIHS  384 (524)
T ss_pred             hhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence            6667999999999999999999999999874

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.71  E-value=2.2e-16  Score=143.48  Aligned_cols=134  Identities=19%  Similarity=0.190  Sum_probs=98.3

Q ss_pred             eeee-eecceEEEEEEECCCCcEEEEEEeecch--------------hhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           98 SKMG-EGTFGQVVECFDNEKKELVAIKIVRSIN--------------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        98 ~~lg-~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      ..|| .|+.|+||.+...  +..++||.+....              .....+.+|+.++..|.|.++..|   ..+++.
T Consensus        37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP---~pl~~~  111 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVP---RPIAAR  111 (239)
T ss_pred             ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCc---eeEeee
Confidence            3567 7888889888753  6779999885311              223457889999999999886433   333332


Q ss_pred             cc-CC---eEEEEEccC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccC
Q 013678          163 DY-RN---HICIVFEKL-G-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  236 (438)
Q Consensus       163 ~~-~~---~~~lv~e~~-~-~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~  236 (438)
                      .. ..   ..++|||++ | .+|.+++...   .+++.    .+.||+.+|.+||++||+||||||+|||++.++     
T Consensus       112 ~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~-----  179 (239)
T PRK01723        112 VVRHGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDPDG-----  179 (239)
T ss_pred             eeecCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCC-----
Confidence            21 12   346999999 6 5899988653   35554    357899999999999999999999999996543     


Q ss_pred             CccccccCCCCCCcccCCCCCCCeEEecCCCCcc
Q 013678          237 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF  270 (438)
Q Consensus       237 df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  270 (438)
                                            .++|+|||.+..
T Consensus       180 ----------------------~v~LIDfg~~~~  191 (239)
T PRK01723        180 ----------------------KFWLIDFDRGEL  191 (239)
T ss_pred             ----------------------CEEEEECCCccc
Confidence                                  688999998764

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.67  E-value=7e-16  Score=130.10  Aligned_cols=121  Identities=25%  Similarity=0.272  Sum_probs=97.4

Q ss_pred             EEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      +++.||+|.++.||++....  ..+++|....... ...+.+|+.++..+.+.+   .++++++.++...+..+++|||+
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~---~~~p~~~~~~~~~~~~~~v~e~~   75 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-GADREREVAILQLLARKG---LPVPKVLASGESDGWSYLLMEWI   75 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcC---CCCCeEEEEcCCCCccEEEEEec
Confidence            45789999999999998744  6799999865433 567889999999998862   33477777777778899999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCCCCcEEEecCc
Q 013678          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL---RLIHTDLKPENILLVSAE  231 (438)
Q Consensus       176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIli~~~~  231 (438)
                       +..+..+         +......++.+++.+|+++|..   +++|+||+|+||+++..+
T Consensus        76 ~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~  126 (155)
T cd05120          76 EGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGK  126 (155)
T ss_pred             CCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCc
Confidence             6665543         4566678899999999999985   799999999999997543

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.65  E-value=6.1e-17  Score=165.16  Aligned_cols=280  Identities=22%  Similarity=0.268  Sum_probs=196.2

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHH----HHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      +.+.+.+-+.+|.++.++.+.-..+|...++|+.........    ....+-.++-..     .+|.++...-.+.....
T Consensus       804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p-----~~P~v~~~~~s~~~rsP  878 (1205)
T KOG0606|consen  804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITP-----RSPAVVRSFPSFPCRSP  878 (1205)
T ss_pred             ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccC-----CCCceecccCCCCCCCC
Confidence            445677889999999999998777786677776543332211    111111111111     12344554444556778


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      .+||++|+ +++|...++.-+  ..+.+-++.+...+..++++||+..+.|+|++|.|+++..+|..+++||+.......
T Consensus       879 ~~L~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~  956 (1205)
T KOG0606|consen  879 LPLVGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL  956 (1205)
T ss_pred             cchhhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccccccc
Confidence            99999999 899999988765  677778888899999999999999999999999999999999999999985433221


Q ss_pred             C-CCcccCCCCCCCeEEecCCCCcccC---C----CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          247 D-GSYFKNLPKSSAIKLIDFGSTTFEH---Q----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       247 ~-~~~~~~~~~~~~~kl~Dfg~a~~~~---~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                      - ...... ........-+++.+....   .    .....+||+.|.+||...+......+|+|++|++++|.++|.+||
T Consensus       957 ~~p~~~~s-g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen  957 IPPTTDLS-GPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred             ccCcCCcc-cccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCC
Confidence            1 000000 000001111222221111   1    122358999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      ......+.+..|...                        ...||.+.                       ...+..+.++
T Consensus      1036 na~tpq~~f~ni~~~------------------------~~~~p~g~-----------------------~~~s~~aq~~ 1068 (1205)
T KOG0606|consen 1036 NAETPQQIFENILNR------------------------DIPWPEGP-----------------------EEGSYEAQDL 1068 (1205)
T ss_pred             CCcchhhhhhccccC------------------------CCCCCCCc-----------------------cccChhhhhh
Confidence            888777766554332                        33444422                       3446688999


Q ss_pred             HHHccccCCCCCCCHH---HHhcCCCCCCCC
Q 013678          399 LQGLLRYDPAERLKAR---EALRHPFFTRDV  426 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~---ell~hp~f~~~~  426 (438)
                      +...|..+|.+|..+.   ++-.|+||+...
T Consensus      1069 ~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~ 1099 (1205)
T KOG0606|consen 1069 INRLLTEEPTQRLGAKGAAEVKGHPFFQDVD 1099 (1205)
T ss_pred             hhhhhccCchhccCcccccccccCCccCCCC
Confidence            9999999999999887   999999998764

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.54  E-value=1e-14  Score=131.36  Aligned_cols=242  Identities=19%  Similarity=0.233  Sum_probs=156.1

Q ss_pred             EEEEEEECCCCcEEEEEEee----cchh-hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC-----eEEEEEccC-
Q 013678          107 QVVECFDNEKKELVAIKIVR----SINK-YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN-----HICIVFEKL-  175 (438)
Q Consensus       107 ~V~~~~~~~~~~~vaiK~~~----~~~~-~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~-----~~~lv~e~~-  175 (438)
                      .||++.+...|..|+--.++    ++.. ..+....-...|..+.|.|+     ++++.|+.+.+     ...+++||+ 
T Consensus        81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnl-----vkfH~yw~d~K~~e~~rviFiteyms  155 (458)
T KOG1266|consen   81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNL-----VKFHKYWTDKKYEEKPRVIFITEYMS  155 (458)
T ss_pred             HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHH-----HHHHHhhcccccccccceEEEEeccc
Confidence            35666666666554433221    1111 11222223455667778777     99999987643     588999999 


Q ss_pred             CCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          176 GPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       176 ~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      .|+|.++|++  +....+.....++|+.||+.||.|||+..  |+|+++..+-|++..+|.+|+..-....         
T Consensus       156 sgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s---------  226 (458)
T KOG1266|consen  156 SGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDS---------  226 (458)
T ss_pred             chhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccc---------
Confidence            9999999985  33456888899999999999999999986  9999999999999887765542211000         


Q ss_pred             cCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC-CCCCChHHHHHHH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL-FQTHENLEHLAMM  330 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p-f~~~~~~~~~~~i  330 (438)
                          -...++.       ..........+-+.|.|||.-.....+.++|||+||....+|..+..- -.+.+....-..+
T Consensus       227 ----~h~s~~~-------~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~i  295 (458)
T KOG1266|consen  227 ----THPSVNS-------TREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENI  295 (458)
T ss_pred             ----cchhhhh-------hhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhh
Confidence                0000000       000111123456789999976666678899999999999999877643 2222211111111


Q ss_pred             HHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCC
Q 013678          331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER  410 (438)
Q Consensus       331 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  410 (438)
                      ....-.                                                     ...+--++++.+||+-.|..|
T Consensus       296 a~~i~~-----------------------------------------------------len~lqr~~i~kcl~~eP~~r  322 (458)
T KOG1266|consen  296 ANVIIG-----------------------------------------------------LENGLQRGSITKCLEGEPNGR  322 (458)
T ss_pred             hhheee-----------------------------------------------------ccCccccCcCcccccCCCCCC
Confidence            111100                                                     001122578999999999999


Q ss_pred             CCHHHHhcCCCCCCCC
Q 013678          411 LKAREALRHPFFTRDV  426 (438)
Q Consensus       411 pta~ell~hp~f~~~~  426 (438)
                      |+|.+++-||-+-+..
T Consensus       323 p~ar~llfHpllfeVh  338 (458)
T KOG1266|consen  323 PDARLLLFHPLLFEVH  338 (458)
T ss_pred             cchhhhhcCceeeecc
Confidence            9999999999876543

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.54  E-value=7.3e-14  Score=137.83  Aligned_cols=142  Identities=18%  Similarity=0.199  Sum_probs=95.4

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecchhh-----------------------------------------HHHHH
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-----------------------------------------REAAM  136 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----------------------------------------~~~~~  136 (438)
                      +.||+|++|.||+|+. .+|+.||||+.+..-..                                         .-++.
T Consensus       123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            5699999999999986 47899999998532100                                         01244


Q ss_pred             HHHHHHHHHHhcCCCCcceEEeccee-ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHH-HHHHHHhC
Q 013678          137 IEIDVLQRLARHDIGGTRCVQIRNWF-DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE-SVAFMHEL  213 (438)
Q Consensus       137 ~E~~~l~~l~~~~i~~~~iv~~~~~~-~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~-aL~~LH~~  213 (438)
                      +|...+.++....-.+++ +.+-.++ +.....+|||||+ |++|.++..... ....   ...++.+++. .+..+|..
T Consensus       202 ~Ea~n~~~~~~~~~~~~~-v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~---~~~ia~~~~~~~l~ql~~~  276 (437)
T TIGR01982       202 REAANASELGENFKNDPG-VYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGLD---RKALAENLARSFLNQVLRD  276 (437)
T ss_pred             HHHHHHHHHHHhcCCCCC-EEeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCCC---HHHHHHHHHHHHHHHHHhC
Confidence            566666666543222222 3333333 2234579999999 999988765422 1122   3455666655 47889999


Q ss_pred             CceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccC
Q 013678          214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH  272 (438)
Q Consensus       214 ~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  272 (438)
                      |++|+|+||.||+++.+|                           .++++|||++....
T Consensus       277 g~~H~D~hPgNilv~~~g---------------------------~i~liDfG~~~~l~  308 (437)
T TIGR01982       277 GFFHADLHPGNIFVLKDG---------------------------KIIALDFGIVGRLS  308 (437)
T ss_pred             CceeCCCCcccEEECCCC---------------------------cEEEEeCCCeeECC
Confidence            999999999999996554                           57888888876544

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.51  E-value=4.2e-13  Score=116.65  Aligned_cols=137  Identities=19%  Similarity=0.218  Sum_probs=99.3

Q ss_pred             eeeeeecceEEEEEEECC------CCcEEEEEEeec--------------c---------hhhHHH----HHHHHHHHHH
Q 013678           98 SKMGEGTFGQVVECFDNE------KKELVAIKIVRS--------------I---------NKYREA----AMIEIDVLQR  144 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~------~~~~vaiK~~~~--------------~---------~~~~~~----~~~E~~~l~~  144 (438)
                      ..||.|-=+.||.|....      .+..+|||+.+.              .         ......    +.+|+..|++
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999998653      357899998751              0         011222    3489999999


Q ss_pred             HHhcCCCCcceEEecceeccCCeEEEEEccCCC-CHHH-HHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HhCCceecCCC
Q 013678          145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP-SLYD-FLRKNSYRSFPIDLVRELGRQLLESVAFM-HELRLIHTDLK  221 (438)
Q Consensus       145 l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~-~l~~~~~~~l~~~~~~~i~~qi~~aL~~L-H~~~ivHrDlk  221 (438)
                      +...++..|..+   ++    ..-+|||||+++ .+.. .++.   ..++...+..+..|++.+|..| |+.||||+||+
T Consensus        83 l~~~Gv~vP~pi---~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs  152 (197)
T cd05146          83 MQKAGIPCPEVV---VL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLS  152 (197)
T ss_pred             HHHcCCCCCeEE---Ee----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            999877555444   32    346899999954 3321 2222   1356667788899999999999 89999999999


Q ss_pred             CCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccC
Q 013678          222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH  272 (438)
Q Consensus       222 p~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  272 (438)
                      +.|||+..                            ..+.|+|||.+...+
T Consensus       153 ~~NIL~~~----------------------------~~v~iIDF~qav~~~  175 (197)
T cd05146         153 EYNMLWHD----------------------------GKVWFIDVSQSVEPT  175 (197)
T ss_pred             HHHEEEEC----------------------------CcEEEEECCCceeCC
Confidence            99999953                            258999999886544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.50  E-value=1e-13  Score=138.31  Aligned_cols=149  Identities=18%  Similarity=0.252  Sum_probs=96.0

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-----------------------------------hhHH----
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------------------------------KYRE----  133 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------------------------------~~~~----  133 (438)
                      .|.. +.||+|++|.||+|+.+.+|+.||||+.+..-                                   +..+    
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~  199 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD  199 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence            4555 78999999999999998889999999986421                                   0011    


Q ss_pred             --HHHHHHHHHHHHHhcCCCCcceEEecceec-cCCeEEEEEccC-CCCHHHHH--HhcCC--CCCCHHHHHHHHHHHHH
Q 013678          134 --AAMIEIDVLQRLARHDIGGTRCVQIRNWFD-YRNHICIVFEKL-GPSLYDFL--RKNSY--RSFPIDLVRELGRQLLE  205 (438)
Q Consensus       134 --~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~-~~~~~~lv~e~~-~~~L~~~l--~~~~~--~~l~~~~~~~i~~qi~~  205 (438)
                        ++.+|+..+.++.+... +...+.+-.++. .....+|||||+ |+.|.++-  ...+.  ..+.+..+..++.|++ 
T Consensus       200 ElD~~~Ea~N~~~~~~~f~-~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-  277 (537)
T PRK04750        200 ELDLMREAANASQLRRNFE-DSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-  277 (537)
T ss_pred             hhCHHHHHHHHHHHHHHcc-CCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-
Confidence              23446656666654322 222244333333 245678999999 99998753  22220  1233444444555544 


Q ss_pred             HHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC
Q 013678          206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ  273 (438)
Q Consensus       206 aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~  273 (438)
                            ..|++|+|+||.||+++.+|                       .....++++|||++.....
T Consensus       278 ------~~GffHaDpHPGNIlv~~~g-----------------------~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        278 ------RDGFFHADMHPGNIFVSYDP-----------------------PENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             ------hCCeeeCCCChHHeEEecCC-----------------------CCCCeEEEEecceEEECCH
Confidence                  58999999999999998765                       1234677788887765543

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.48  E-value=2.4e-13  Score=117.29  Aligned_cols=114  Identities=18%  Similarity=0.128  Sum_probs=84.4

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-  175 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-  175 (438)
                      ++.|+.|.++.||++...  ++.|++|+............+|+.+++.+.+.++    +.+++.+..  ...++|||++ 
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~----~P~~~~~~~--~~~~lv~e~i~   74 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAGI----GPKLYYFDP--ETGVLITEFIE   74 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCC----CCceEEEeC--CCCeEEEEecC
Confidence            467899999999999864  6789999976543333456789999999987654    234444433  2347999999 


Q ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-----eecCCCCCcEEEe
Q 013678          176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL-----IHTDLKPENILLV  228 (438)
Q Consensus       176 ~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-----vHrDlkp~NIli~  228 (438)
                      |.++.+.    .   .   ....++.+++.+|+.||+.++     +|+|++|.||+++
T Consensus        75 G~~l~~~----~---~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~  122 (170)
T cd05151          75 GSELLTE----D---F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD  122 (170)
T ss_pred             CCccccc----c---c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE
Confidence            7776542    0   1   123456889999999999885     9999999999996

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.42  E-value=2.3e-12  Score=126.95  Aligned_cols=179  Identities=17%  Similarity=0.257  Sum_probs=130.1

Q ss_pred             eeeeeecceEEE-EEEECCCCcEEEEEEeecchh-hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678           98 SKMGEGTFGQVV-ECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus        98 ~~lg~G~~g~V~-~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      ....-++.+ +| .|..+.++.+|.|...+..+. ..+...+-++.|+.++||+|     +++++.++..+.+|||+|.+
T Consensus        18 e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~I-----l~yL~t~e~~~~~ylvTErV   91 (690)
T KOG1243|consen   18 EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNI-----LSYLDTTEEEGTLYLVTERV   91 (690)
T ss_pred             ccccCCCcc-cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchh-----hhhhhhhcccCceEEEeecc
Confidence            333444443 44 466678888999998875443 34557788899999999998     99999999999999999998


Q ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCC
Q 013678          176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL  254 (438)
Q Consensus       176 ~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~  254 (438)
                      . .|..++++     +....+...+.||+.||.||| ..+++|++|.-+.|+++..|..||.+|.++......+      
T Consensus        92 ~-Pl~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~------  159 (690)
T KOG1243|consen   92 R-PLETVLKE-----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFN------  159 (690)
T ss_pred             c-cHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCC------
Confidence            3 45666654     347778888999999999998 6789999999999999999977777776644322111      


Q ss_pred             CCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhC
Q 013678          255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       255 ~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg  314 (438)
                                  .      ......--..|..|+.+....  ...|.|-|||++++++.|
T Consensus       160 ------------~------~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  160 ------------A------PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             ------------c------ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence                        0      000111122356666543332  457999999999999999

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.40  E-value=2.1e-13  Score=132.93  Aligned_cols=251  Identities=20%  Similarity=0.137  Sum_probs=172.0

Q ss_pred             cCCceEEEeeeeeecceEEEEEEEC-CCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDN-EKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ...+|..+..||.|.|+.|+.+... .++..|++|-+.+..   ........|+.+...+.-    +.+++.+...+...
T Consensus       263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~----~~~~~g~~~~W~~~  338 (524)
T KOG0601|consen  263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGS----HLPSVGKNSSWSQL  338 (524)
T ss_pred             ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhc----ccccCCCCCCcccc
Confidence            3467889999999999999987655 678889999765422   122233456666555532    23447766666666


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      .+.||-.||| ++++...+.-.  ..+.+...+++..|++.++.++|+..++|+|+||+||++..+|             
T Consensus       339 r~~~ip~e~~~~~s~~l~~~~~--~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~-------------  403 (524)
T KOG0601|consen  339 RQGYIPLEFCEGGSSSLRSVTS--QMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG-------------  403 (524)
T ss_pred             ccccCchhhhcCcchhhhhHHH--HhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch-------------
Confidence            7778999999 88877665332  2688888999999999999999999999999999999997753             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcc--hhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYR--APEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                   ...+++|||+.....-......+...+.  +++......+..++|++|||..+.+.+++...-....
T Consensus       404 -------------~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~  470 (524)
T KOG0601|consen  404 -------------FFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV  470 (524)
T ss_pred             -------------hhhhccccccccccceecccccccccccccchhhccccccccccccccccccccccccCcccCcccc
Confidence                         2346667776654222222222333344  5555556678899999999999999998865432211


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      .   ...+...                                                  ..........++..+.+.|
T Consensus       471 ~---~~~i~~~--------------------------------------------------~~p~~~~~~~~~q~~~kv~  497 (524)
T KOG0601|consen  471 Q---SLTIRSG--------------------------------------------------DTPNLPGLKLQLQVLLKVM  497 (524)
T ss_pred             c---ceeeecc--------------------------------------------------cccCCCchHHhhhhhhhhh
Confidence            1   0001000                                                  0011122235778899999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      +..++..|+.+.++..|.=|.+.
T Consensus       498 ~~~~~~~~~l~~~l~~~~~~~~~  520 (524)
T KOG0601|consen  498 INPDRKRRPSAVELSLHSEFYRD  520 (524)
T ss_pred             cCCccccchhhhhhcccchhhhh
Confidence            99999999999999988776543

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.34  E-value=3.6e-11  Score=100.49  Aligned_cols=145  Identities=24%  Similarity=0.227  Sum_probs=108.8

Q ss_pred             EEeeeeeecceEEEEEEECCCCcEEEEEEe-ec--------chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIV-RS--------INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~-~~--------~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      .+..|-+|+-+.|+++.  ..|+.+.||.= .+        ..-.+....+|+++|.++..-.|..|.+.     |.+..
T Consensus        11 ~l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~-----~~D~~   83 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLI-----FIDTY   83 (229)
T ss_pred             cceeeeccceeeEeeec--cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEE-----EEecC
Confidence            56778899999999996  45787788742 11        12245667889999999998877444332     33444


Q ss_pred             eEEEEEccCCC--CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          167 HICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       167 ~~~lv~e~~~~--~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      .-+|+|||+.|  ++.+++...............++.+|=..+.-||..+|||+||..+||++..+|             
T Consensus        84 ~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~-------------  150 (229)
T KOG3087|consen   84 GGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDG-------------  150 (229)
T ss_pred             CCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCC-------------
Confidence            56788999955  899999876544444444478889999999999999999999999999998765             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCccc
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFE  271 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~  271 (438)
                                 .+..+.++|||++...
T Consensus       151 -----------~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen  151 -----------NQITPILIDFGLSSVS  166 (229)
T ss_pred             -----------CcCceEEEeecchhcc
Confidence                       3445689999998654

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.24  E-value=1.2e-10  Score=97.96  Aligned_cols=131  Identities=22%  Similarity=0.219  Sum_probs=93.3

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEe-ec--------chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIV-RS--------INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~-~~--------~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ..+++|+=+.+|.+..  -|..+++|.= ++        ..-..+...+|..++.++....+..   ..+++  .+.+..
T Consensus         2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~---P~v~d--vD~~~~   74 (204)
T COG3642           2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPV---PIVYD--VDPDNG   74 (204)
T ss_pred             chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCC---CeEEE--EcCCCC
Confidence            3578899999998854  3445666642 21        1123456678999999999887633   33433  344557


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      .|+|||. |..|.+.+...     .    ..++..+=.-+.-||..||+|+||.++||++...                 
T Consensus        75 ~I~me~I~G~~lkd~l~~~-----~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~-----------------  128 (204)
T COG3642          75 LIVMEYIEGELLKDALEEA-----R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG-----------------  128 (204)
T ss_pred             EEEEEEeCChhHHHHHHhc-----c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCC-----------------
Confidence            7999999 77788888754     1    3455556666778999999999999999999543                 


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEH  272 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~  272 (438)
                                 .+.++|||++....
T Consensus       129 -----------~i~~IDfGLg~~s~  142 (204)
T COG3642         129 -----------RIYFIDFGLGEFSD  142 (204)
T ss_pred             -----------cEEEEECCcccccc
Confidence                       38999999987543

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.23  E-value=6.6e-11  Score=106.63  Aligned_cols=108  Identities=17%  Similarity=0.151  Sum_probs=76.5

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC---CeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR---NHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~---~~~~lv~  172 (438)
                      +.|+.|.++.||++.... |+.+++|+......  ....+.+|..+++.+.+.++..   .+++.+....   +..++||
T Consensus         4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~v---p~~~~~~~~~~~~~~~~~v~   79 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPV---PKVLALCEDPSVLGTPFYVM   79 (223)
T ss_pred             eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCC---CCEEEECCCCCccCCceEEE
Confidence            568999999999998643 57899999765432  3567889999999998865433   3444444432   3678999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE  212 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  212 (438)
                      ||+ |.++.+.+..   ..++......++.+++.+|..||+
T Consensus        80 e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~  117 (223)
T cd05154          80 ERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHS  117 (223)
T ss_pred             EEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhC
Confidence            999 7777665421   146666777777777777777773

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.21  E-value=7.2e-10  Score=101.93  Aligned_cols=141  Identities=18%  Similarity=0.069  Sum_probs=99.3

Q ss_pred             EEEEEECCCCcEEEEEEeecch------------hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc--CCeEEEEEc
Q 013678          108 VVECFDNEKKELVAIKIVRSIN------------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RNHICIVFE  173 (438)
Q Consensus       108 V~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--~~~~~lv~e  173 (438)
                      |.++.  -.|+.|.||......            .....+.+|...+.+|...+|..|..|-+...-..  ...-+||||
T Consensus        38 vvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte  115 (268)
T PRK15123         38 TLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE  115 (268)
T ss_pred             EEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence            44543  346678888664322            11124789999999999999877766555321111  235789999


Q ss_pred             cC-CC-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          174 KL-GP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       174 ~~-~~-~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ++ +. +|.+++........+......++.+++..+.-||..||+|+|+++.|||++.+..                   
T Consensus       116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~-------------------  176 (268)
T PRK15123        116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFP-------------------  176 (268)
T ss_pred             eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEecccc-------------------
Confidence            99 43 7999986432234667778899999999999999999999999999999974200                   


Q ss_pred             cCCCCCCCeEEecCCCCcc
Q 013678          252 KNLPKSSAIKLIDFGSTTF  270 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~  270 (438)
                       .......+.|+||+.+..
T Consensus       177 -~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        177 -GREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             -CCCCCceEEEEECCcccc
Confidence             001245689999998753

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.14  E-value=1.6e-10  Score=100.22  Aligned_cols=127  Identities=28%  Similarity=0.332  Sum_probs=81.0

Q ss_pred             EEEEEEECCCCcEEEEEEeecc---------------------------hhhHHHHHHHHHHHHHHHhcCCCCcceEEec
Q 013678          107 QVVECFDNEKKELVAIKIVRSI---------------------------NKYREAAMIEIDVLQRLARHDIGGTRCVQIR  159 (438)
Q Consensus       107 ~V~~~~~~~~~~~vaiK~~~~~---------------------------~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~  159 (438)
                      .||.|.. .+|..+|||+.+..                           ........+|.++|.++...++..|   +.+
T Consensus         1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP---~p~   76 (188)
T PF01163_consen    1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVP---KPY   76 (188)
T ss_dssp             EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS-----EE
T ss_pred             CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCC---cEE
Confidence            3888986 45778999987420                           0122456789999999988765444   444


Q ss_pred             ceeccCCeEEEEEccCC--CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH-HHhCCceecCCCCCcEEEecCcccccC
Q 013678          160 NWFDYRNHICIVFEKLG--PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF-MHELRLIHTDLKPENILLVSAEYVKVP  236 (438)
Q Consensus       160 ~~~~~~~~~~lv~e~~~--~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~-LH~~~ivHrDlkp~NIli~~~~~~kl~  236 (438)
                      ++.    .-+|||||++  |.....+....   ++......++.+++..+.. +|+.||+|+||.+.|||++.+      
T Consensus        77 ~~~----~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~------  143 (188)
T PF01163_consen   77 DYN----RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG------  143 (188)
T ss_dssp             EEE----TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT------
T ss_pred             EEe----CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc------
Confidence            332    2369999996  64333333321   2245567788888886655 579999999999999999643      


Q ss_pred             CccccccCCCCCCcccCCCCCCCeEEecCCCCcccC
Q 013678          237 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH  272 (438)
Q Consensus       237 df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  272 (438)
                                            .+.|+|||.+....
T Consensus       144 ----------------------~~~iIDf~qav~~~  157 (188)
T PF01163_consen  144 ----------------------KVYIIDFGQAVDSS  157 (188)
T ss_dssp             ----------------------CEEE--GTTEEETT
T ss_pred             ----------------------eEEEEecCcceecC
Confidence                                  58999999886544

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.13  E-value=2.6e-09  Score=102.60  Aligned_cols=167  Identities=18%  Similarity=0.255  Sum_probs=125.2

Q ss_pred             cceEEEEEEECCCCcEEEEEEeecchh-hHHHHHHHHHHHHHHHhcCCCCcceEEecceecc----CCeEEEEEccC--C
Q 013678          104 TFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY----RNHICIVFEKL--G  176 (438)
Q Consensus       104 ~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~----~~~~~lv~e~~--~  176 (438)
                      ...+.|++....+|..|++|.++.... .......-+++++++.|.|+     |.+.++|..    ...+++|++|+  .
T Consensus       288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~Nv-----V~frevf~t~tF~D~SlvlvYDYyP~s  362 (655)
T KOG3741|consen  288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNV-----VPFREVFLTYTFGDLSLVLVYDYYPSS  362 (655)
T ss_pred             ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCce-----eehhhhhhhhccCcceEEEEEecCCCC
Confidence            346789999999999999999843221 11233446788999999988     999999873    35799999998  6


Q ss_pred             CCHHHHHHhc-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          177 PSLYDFLRKN-------------SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       177 ~~L~~~l~~~-------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      ++|.++.-..             .+...++..++.|+.||..||.++|+.|+.-+-|.|.+|+++.              
T Consensus       363 ~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G--------------  428 (655)
T KOG3741|consen  363 PTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTG--------------  428 (655)
T ss_pred             chHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeC--------------
Confidence            7888876421             1245788999999999999999999999999999999999954              


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~  316 (438)
                                   +.+++|...|.......+..           |-+.+   -.+-|.=.||.+++.|.||..
T Consensus       429 -------------~~RIriS~C~i~Dvl~~d~~-----------~~le~---~Qq~D~~~lG~ll~aLAt~~~  474 (655)
T KOG3741|consen  429 -------------KMRIRISGCGIMDVLQEDPT-----------EPLES---QQQNDLRDLGLLLLALATGTE  474 (655)
T ss_pred             -------------cceEEEecccceeeecCCCC-----------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence                         33677776666555443331           11111   235688999999999999953

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.11  E-value=2.8e-11  Score=119.83  Aligned_cols=164  Identities=21%  Similarity=0.343  Sum_probs=115.0

Q ss_pred             HHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCccccc
Q 013678          202 QLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS  280 (438)
Q Consensus       202 qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~g  280 (438)
                      +++.||.|+|. .++||++|.|++|.++..|..|++.|+++........+        .+..=|+++.-.       ..-
T Consensus       107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~--------p~~~yd~~lp~~-------~~~  171 (700)
T KOG2137|consen  107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEY--------PFSEYDPPLPLL-------LQP  171 (700)
T ss_pred             cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCcc--------ccccCCCCCChh-------hcc
Confidence            34489999995 58999999999999999999999988876554432211        122223333222       233


Q ss_pred             CCCcchhHHHhCCCCCcchhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcc
Q 013678          281 TRHYRAPEVILGLGWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARL  359 (438)
Q Consensus       281 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell-tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  359 (438)
                      ...|.|||++.+...+.++|++|+||++|.+. .|+..+.......... .....+..                      
T Consensus       172 ~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~-~~~~~~~~----------------------  228 (700)
T KOG2137|consen  172 HLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS-FSRNLLNA----------------------  228 (700)
T ss_pred             CcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhh-hhhccccc----------------------
Confidence            55799999999988899999999999999999 5655554432221111 11100000                      


Q ss_pred             cCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          360 DWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                                             .......+++.++++=|.++|..|+..||++.+++..|||.+..
T Consensus       229 -----------------------~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~  272 (700)
T KOG2137|consen  229 -----------------------GAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPG  272 (700)
T ss_pred             -----------------------ccccccccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCch
Confidence                                   00111246678999999999999999999999999999999864

>PRK09902 hypothetical protein; Provisional

Probab=98.99  E-value=1.8e-08  Score=87.89  Aligned_cols=128  Identities=13%  Similarity=0.118  Sum_probs=96.7

Q ss_pred             eeecceEEEEEEECCCCcEEEEEEeec----c---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc--CCeEEEE
Q 013678          101 GEGTFGQVVECFDNEKKELVAIKIVRS----I---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RNHICIV  171 (438)
Q Consensus       101 g~G~~g~V~~~~~~~~~~~vaiK~~~~----~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--~~~~~lv  171 (438)
                      |+||.+-|+.....  |..+-+|.-..    +   ......+.+|+..|..|...++.-|.++ +.+.-..  ...-+||
T Consensus        27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV  103 (216)
T PRK09902         27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV  103 (216)
T ss_pred             CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence            66888889887533  33677886531    1   2356788999999999999988655555 2222222  2357899


Q ss_pred             EccCC--CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 013678          172 FEKLG--PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       172 ~e~~~--~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  231 (438)
                      +|-++  .+|.+++........+......++.+++..+.-||+.|+.|+|+.+.||+++.+|
T Consensus       104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g  165 (216)
T PRK09902        104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEG  165 (216)
T ss_pred             EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCC
Confidence            99885  6999998765434567788889999999999999999999999999999997543

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.92  E-value=1.5e-08  Score=90.08  Aligned_cols=113  Identities=29%  Similarity=0.328  Sum_probs=88.5

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCcceEEecceecc-CCeEEEEEccC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Q 013678          132 REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-RNHICIVFEKL-G-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA  208 (438)
Q Consensus       132 ~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-~~~~~lv~e~~-~-~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~  208 (438)
                      ...+.+|...+..|...+|..|..+-+...-.. ....+||||++ + .+|.+++....  ..+......++.+++..+.
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~--~~~~~~~~~ll~~l~~~i~  132 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE--QLDPSQRRELLRALARLIA  132 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc--ccchhhHHHHHHHHHHHHH
Confidence            456889999999999999877666655433111 13568999999 5 37999998644  3667778899999999999


Q ss_pred             HHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcc
Q 013678          209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF  270 (438)
Q Consensus       209 ~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  270 (438)
                      -||++||+|+|+++.|||++.++                        ....+.++||+-+..
T Consensus       133 ~lH~~gi~H~Dl~~~NILv~~~~------------------------~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  133 KLHDAGIYHGDLNPSNILVDPDD------------------------GQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHHHCcCCCCCCCcccEEEeCCC------------------------CceeEEEEcchhcee
Confidence            99999999999999999997653                        234688999987654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.83  E-value=3.4e-08  Score=88.30  Aligned_cols=123  Identities=28%  Similarity=0.306  Sum_probs=89.1

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeec----------c-------------hhhHHHHHHHHHHHHHHHhcCC
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----------I-------------NKYREAAMIEIDVLQRLARHDI  150 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----------~-------------~~~~~~~~~E~~~l~~l~~~~i  150 (438)
                      +.+..+||-|-=|.||.|.+. .|.++|||.=+.          .             ...+..+.+|.++|.+|.....
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            456789999999999999975 677899996421          0             1234567889999999987632


Q ss_pred             CCcceEEecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 013678          151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  229 (438)
Q Consensus       151 ~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  229 (438)
                      .   +.+.++    -+.-++|||+. |..|...       .+..+....++..|+.-+..+-..||||+|+.+-||+++.
T Consensus       172 ~---VP~P~~----~nRHaVvMe~ieG~eL~~~-------r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~  237 (304)
T COG0478         172 K---VPKPIA----WNRHAVVMEYIEGVELYRL-------RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTE  237 (304)
T ss_pred             C---CCCccc----cccceeeeehcccceeecc-------cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEec
Confidence            1   123222    24567999999 6555543       2345556677777777777777999999999999999987


Q ss_pred             Cc
Q 013678          230 AE  231 (438)
Q Consensus       230 ~~  231 (438)
                      +|
T Consensus       238 dg  239 (304)
T COG0478         238 DG  239 (304)
T ss_pred             CC
Confidence            66

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.78  E-value=1.5e-07  Score=83.45  Aligned_cols=138  Identities=19%  Similarity=0.170  Sum_probs=95.6

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeecchh--------------------h-----HHHHHHHHHHHHHHHhcCCC
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--------------------Y-----REAAMIEIDVLQRLARHDIG  151 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------------------~-----~~~~~~E~~~l~~l~~~~i~  151 (438)
                      ...|++|-=+.||+|.. .++..||+|+++....                    .     ..-..+|+..|+++...++.
T Consensus        53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr  131 (268)
T COG1718          53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR  131 (268)
T ss_pred             EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            34677788889999975 5688899999863110                    1     12245799999999887763


Q ss_pred             CcceEEecceeccCCeEEEEEccCCCCH--HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEe
Q 013678          152 GTRCVQIRNWFDYRNHICIVFEKLGPSL--YDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLV  228 (438)
Q Consensus       152 ~~~iv~~~~~~~~~~~~~lv~e~~~~~L--~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~  228 (438)
                      .|   +-+.+.    .-.|||||+|...  .-.|+.   ..+...++..+..++++.+.-|-. .++||+||..-|||+.
T Consensus       132 vP---~Pi~~~----~nVLvMEfIg~~g~pAP~LkD---v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~  201 (268)
T COG1718         132 VP---EPIAFR----NNVLVMEFIGDDGLPAPRLKD---VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH  201 (268)
T ss_pred             CC---Cceeec----CCeEEEEeccCCCCCCCCccc---CCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE
Confidence            33   323322    2479999995441  001111   124444788899999999998877 9999999999999996


Q ss_pred             cCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC
Q 013678          229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ  273 (438)
Q Consensus       229 ~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~  273 (438)
                      .                            ..+.|+|||.|.....
T Consensus       202 ~----------------------------~~p~iID~~QaV~~~h  218 (268)
T COG1718         202 D----------------------------GEPYIIDVSQAVTIDH  218 (268)
T ss_pred             C----------------------------CeEEEEECccccccCC
Confidence            3                            2589999998876543

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.77  E-value=1.2e-07  Score=83.03  Aligned_cols=131  Identities=17%  Similarity=0.213  Sum_probs=88.1

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhh-H---------HHHHHHHHHHHHHHhcCCCCcc---e
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-R---------EAAMIEIDVLQRLARHDIGGTR---C  155 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~---------~~~~~E~~~l~~l~~~~i~~~~---i  155 (438)
                      .+..+|.+++.+-......|.+..  .+|+.+++|..+....- .         ....+++..+..+...++..++   +
T Consensus        28 i~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl  105 (229)
T PF06176_consen   28 ILDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL  105 (229)
T ss_pred             HHhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence            467899999999888888887775  55778999987642211 1         2234566666677665543322   2


Q ss_pred             EEecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 013678          156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       156 v~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  231 (438)
                      +...-.+......+|||||+ |..|.++..      +++    .+...|..++.-||+.|+.|+|..|.|++++.++
T Consensus       106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~  172 (229)
T PF06176_consen  106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG  172 (229)
T ss_pred             eeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc
Confidence            22222223334677999999 877776532      333    2445677889999999999999999999996543

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.65  E-value=7.3e-08  Score=96.06  Aligned_cols=137  Identities=18%  Similarity=0.199  Sum_probs=85.5

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch-----------------------------------h------hHHHHH
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------------------------------K------YREAAM  136 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------------------------------~------~~~~~~  136 (438)
                      +.|+.++-|.||+|+.+ +|+.||||+.+.+-                                   +      ..-++.
T Consensus       131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            56899999999999975 49999999975210                                   0      011234


Q ss_pred             HHHHHHHHHHhcCCCCcceEEecce-eccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH-HHHHHhC
Q 013678          137 IEIDVLQRLARHDIGGTRCVQIRNW-FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES-VAFMHEL  213 (438)
Q Consensus       137 ~E~~~l~~l~~~~i~~~~iv~~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~a-L~~LH~~  213 (438)
                      +|...+.++.+..-+.+. +++-.+ ++..+.-.|+|||+ |..+.+...... ..++...+.   ..++.+ +..+-..
T Consensus       210 ~EA~n~~~~~~nf~~~~~-v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia---~~~~~~f~~q~~~d  284 (517)
T COG0661         210 REAANAERFRENFKDDPD-VYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELA---ELLVRAFLRQLLRD  284 (517)
T ss_pred             HHHHHHHHHHHHcCCCCC-eEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHH---HHHHHHHHHHHHhc
Confidence            577777777654333333 333333 33456778999999 878887743222 235533322   222222 3344458


Q ss_pred             CceecCCCCCcEEEecCcccccCCccc
Q 013678          214 RLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       214 ~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                      |+.|.|.+|.||++..+|.+.+-|||+
T Consensus       285 gffHaDpHpGNi~v~~~g~i~~lDfGi  311 (517)
T COG0661         285 GFFHADPHPGNILVRSDGRIVLLDFGI  311 (517)
T ss_pred             CccccCCCccceEEecCCcEEEEcCcc
Confidence            999999999999998776544444444

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.63  E-value=7.8e-07  Score=80.63  Aligned_cols=82  Identities=21%  Similarity=0.268  Sum_probs=58.9

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-  175 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-  175 (438)
                      ++.|+.|..+.||++....  ..+++|+.... .....+.+|..+++.+....+..|.++............+++|+++ 
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            5789999999999998655  47999997654 4567788999999999988763333332221223345689999999 


Q ss_pred             CCCHHH
Q 013678          176 GPSLYD  181 (438)
Q Consensus       176 ~~~L~~  181 (438)
                      |.++..
T Consensus        79 g~~~~~   84 (239)
T PF01636_consen   79 GRPLDD   84 (239)
T ss_dssp             SEEHHH
T ss_pred             cccccc
Confidence            777766

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.58  E-value=2.8e-07  Score=86.82  Aligned_cols=194  Identities=16%  Similarity=0.200  Sum_probs=120.1

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeecchhhH-HHHHHHHHHHHHHHhcCCCCcceEEeccee--ccC-CeEEEEE
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDIGGTRCVQIRNWF--DYR-NHICIVF  172 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~--~~~-~~~~lv~  172 (438)
                      .+.||+|+-+.+|-.-.-   ...+-|++..-.-.. .+...|+.  .--.|+.+ ...++--....  -++ ..+.+.|
T Consensus        16 gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa~~aqk~a~la--~~p~~p~~-~~rvaWPqa~L~G~~~~~~iGflm   89 (637)
T COG4248          16 GRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPAAQAQKVAELA--ATPDAPLL-NYRVAWPQATLHGGRRGKVIGFLM   89 (637)
T ss_pred             CccccCCccceeeecchh---hchhheeecCCCchHHHHHHHHhc--cCCCCcch-hhhhcccHHHhhCCCccceeEEec
Confidence            356899999999965322   224568876432211 11111111  01111111 00011111111  122 2378889


Q ss_pred             ccC-CC-CHHHHHH----hcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          173 EKL-GP-SLYDFLR----KNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       173 e~~-~~-~L~~~l~----~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      ..+ |. .+.+++.    ++......+....+.++.|+.+.+.||+.|.+-+|++++|+|+++++.+.+.|-.       
T Consensus        90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsD-------  162 (637)
T COG4248          90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSD-------  162 (637)
T ss_pred             ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccc-------
Confidence            988 43 4445443    2223457789999999999999999999999999999999999888876665521       


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHh-----CCCCCcchhHHHHHHHHHHHHhC-CCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSG-EALFQT  320 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg-~~pf~~  320 (438)
                                  ...|++-|.      .....+|...|.+||.-.     +..-+...|-|.||+++|+++.| +.||.+
T Consensus       163 ------------sfqi~~ng~------~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysG  224 (637)
T COG4248         163 ------------SFQINANGT------LHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSG  224 (637)
T ss_pred             ------------ceeeccCCc------eEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCc
Confidence                        122222221      111237788899999765     23456789999999999999986 999976


Q ss_pred             C
Q 013678          321 H  321 (438)
Q Consensus       321 ~  321 (438)
                      .
T Consensus       225 I  225 (637)
T COG4248         225 I  225 (637)
T ss_pred             c
Confidence            3

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.54  E-value=2.4e-06  Score=74.75  Aligned_cols=124  Identities=17%  Similarity=0.298  Sum_probs=94.9

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecch-----------------hhHHHHHHHHHHHHHHH-hcCCCCcceEEec
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------------KYREAAMIEIDVLQRLA-RHDIGGTRCVQIR  159 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------------~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~  159 (438)
                      ..||+|+.-.||.-   ......+||++....                 ....+..+|+.....+. ..++...++.+++
T Consensus         7 ~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    7 DLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             cccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            46899999999864   333447899987544                 23567788999999988 8888888999999


Q ss_pred             ceeccCCeEEEEEccC-C------CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 013678          160 NWFDYRNHICIVFEKL-G------PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~------~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  231 (438)
                      |+.+++.-..+|+|.. +      .+|.+++...   .++. .....   +-.-.+||-+.+|+.+||+|.||++...+
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~---~~~~-~~~~~---L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~  155 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEG---GLTE-ELRQA---LDEFKRYLLDHHIVIRDLNPHNIVVQRRD  155 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHHHcC---CccH-HHHHH---HHHHHHHHHHcCCeecCCCcccEEEEecC
Confidence            9999998889999976 2      3788998654   3655 33333   33445688899999999999999997654

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.53  E-value=5.8e-09  Score=102.67  Aligned_cols=246  Identities=17%  Similarity=0.074  Sum_probs=164.7

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      -|...+.+++|+++.+++.+...+...+ .+.+...    ....-++++|.+++|||.    .+..++.++.+...+++|
T Consensus       243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~----l~~rl~~eLLdK~n~P~~----~v~~~~d~~~E~~~~i~~  313 (829)
T KOG0576|consen  243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT----LSRRLAIELLDKVNNPNP----VVRYLEDYDGEDYLWIPM  313 (829)
T ss_pred             chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc----hhhHHHHHHHHHccCCCC----cccccccCCcccccchhh
Confidence            3556678899999999999877666554 7776543    344568899999999982    377777788888999999


Q ss_pred             ccC-CC-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          173 EKL-GP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       173 e~~-~~-~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      +++ ++ +-....... ...+..-+...+.+.-.++|+++|+.-=+|+|    ||+..+                     
T Consensus       314 ~i~s~~rs~~~~~~~s-e~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~---------------------  367 (829)
T KOG0576|consen  314 RICSTGRSSALEMTVS-EIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE---------------------  367 (829)
T ss_pred             hhhcCCccccccCChh-hHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc---------------------
Confidence            999 44 221111100 01233344555666677899999998778998    887643                     


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  328 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~  328 (438)
                             ...+..||+........  ..+..+|+.++|||+...+.+....|.|++|+--.++.-|-+|-...-  ... 
T Consensus       368 -------~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~--~~~-  437 (829)
T KOG0576|consen  368 -------EEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPP--AVL-  437 (829)
T ss_pred             -------cccccccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCCc--ccc-
Confidence                   34678888877666554  455789999999999999999999999999987666666666653300  000 


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH-HHHHHHHccccCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD-LIDLLQGLLRYDP  407 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~ll~~~L~~dP  407 (438)
                         ...|.-|                           ........               ...+.. -.++...|+..-|
T Consensus       438 ---~~~g~~p---------------------------~s~~L~~~---------------~aw~~~~~~~~~~~~~~g~P  472 (829)
T KOG0576|consen  438 ---PMIGNGP---------------------------NSPMLTDK---------------SAWSPVFHRDFPAPCLNGLP  472 (829)
T ss_pred             ---CCCCCCC---------------------------Cccccchh---------------hhcCcccccCCcccccCCCC
Confidence               0000000                           00000000               000111 1257788999999


Q ss_pred             CCCCCHHHHhcCCCCCCCCCC
Q 013678          408 AERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       408 ~~Rpta~ell~hp~f~~~~~~  428 (438)
                      ..|++..+++.|.+|.++.-+
T Consensus       473 ~~pkv~mgacfsKvfngCpl~  493 (829)
T KOG0576|consen  473 PTPKVHMGACFSKVFNGCPLR  493 (829)
T ss_pred             CCCcchhhHHHHHHhccCccc
Confidence            999999999999999987644

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.51  E-value=1.5e-06  Score=78.25  Aligned_cols=72  Identities=15%  Similarity=0.200  Sum_probs=52.5

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-C
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-G  176 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~  176 (438)
                      ..||.|..+.||+.   . +..+++|...... ......+|.+++..+...++..   .+.+++.+..+...+|||++ |
T Consensus         7 ~~i~~G~t~~~y~~---~-~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~glpv---P~~~~~~~~~~~~glv~e~i~G   78 (226)
T TIGR02172         7 TQTGEGGNGESYTH---K-TGKWMLKLYNPGF-DKETIKREFDASRKVFSLGIPT---PHPFDLVEDGGRLGLIYELIVG   78 (226)
T ss_pred             eeecCCCCcceeEe---c-CCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcCCCC---CceEEEEecCCeeeeeeeecCC
Confidence            56899999999984   2 4457889876532 3455788999999998766544   44455556667788999999 6


Q ss_pred             C
Q 013678          177 P  177 (438)
Q Consensus       177 ~  177 (438)
                      .
T Consensus        79 ~   79 (226)
T TIGR02172        79 K   79 (226)
T ss_pred             c
Confidence            4

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=98.46  E-value=8.6e-06  Score=70.71  Aligned_cols=118  Identities=21%  Similarity=0.293  Sum_probs=85.0

Q ss_pred             CceEEEeeeeeecc-eEEEEEEECCCCcEEEEEEeec----c--------h----------hhHHHHHHHHHHHHHHHhc
Q 013678           92 PRCKILSKMGEGTF-GQVVECFDNEKKELVAIKIVRS----I--------N----------KYREAAMIEIDVLQRLARH  148 (438)
Q Consensus        92 ~~y~~~~~lg~G~~-g~V~~~~~~~~~~~vaiK~~~~----~--------~----------~~~~~~~~E~~~l~~l~~~  148 (438)
                      ..++.++.||.|.- |.||+++  ..|+.||||+++.    .        .          .....+..|.+...+|+..
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~--I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVE--IDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEE--ECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            56799999999999 9999997  4577999999431    0        0          1223567899999999877


Q ss_pred             CCCCcceEEecceeccC------------------CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Q 013678          149 DIGGTRCVQIRNWFDYR------------------NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF  209 (438)
Q Consensus       149 ~i~~~~iv~~~~~~~~~------------------~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~  209 (438)
                      +-.+.-.|+++||+.-.                  ....||.||. ...           .++...    +.+|.+-|..
T Consensus       115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~~~~----~~~~~~dl~~  179 (207)
T PF13095_consen  115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQIRD----IPQMLRDLKI  179 (207)
T ss_pred             cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccchhH----HHHHHHHHHH
Confidence            54332248998887311                  1357888877 322           133333    4567778889


Q ss_pred             HHhCCceecCCCCCcEE
Q 013678          210 MHELRLIHTDLKPENIL  226 (438)
Q Consensus       210 LH~~~ivHrDlkp~NIl  226 (438)
                      +|..||+-+|+|+.|..
T Consensus       180 ~~k~gI~~~Dv~~~ny~  196 (207)
T PF13095_consen  180 LHKLGIVPRDVKPRNYR  196 (207)
T ss_pred             HHHCCeeeccCcccccc
Confidence            99999999999999997

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.29  E-value=5e-06  Score=87.77  Aligned_cols=211  Identities=25%  Similarity=0.358  Sum_probs=131.7

Q ss_pred             HHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 013678          134 AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE  212 (438)
Q Consensus       134 ~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  212 (438)
                      ....|+..+..+.|.|++.+....+...+.. -...+..++| ..++.+.+..-.  .++....+.+..+++.||.|+|+
T Consensus       228 ~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g-~~~~v~~~~~s~~~~~~~~q~v~--~i~~~~~r~~~~~~~~GL~~~h~  304 (1351)
T KOG1035|consen  228 TTEIELESLSKIAHDNLGGYFVYGLERLFRG-IVLDVLQEICSKVELRSLLQSVG--SIPLETLRILHQKLLEGLAYLHS  304 (1351)
T ss_pred             HHHHHHHHHHhhccccccceeEEeehhhcch-HHHHHHHhhcCccchHHHHhhcc--ccCHHHHHHHHHHHhhhHHHHHH
Confidence            3445777788888888844444443333222 1233445678 778888887765  78899999999999999999999


Q ss_pred             CCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEe--cCCCCcccCCCCcc--cccCCCcchhH
Q 013678          213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI--DFGSTTFEHQDHSY--VVSTRHYRAPE  288 (438)
Q Consensus       213 ~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~--Dfg~a~~~~~~~~~--~~gt~~y~aPE  288 (438)
                      .       +..|+.+......                 ....+......++  ||+.+.........  ..-+.-+.++|
T Consensus       305 ~-------~l~~v~L~~s~~~-----------------~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e  360 (1351)
T KOG1035|consen  305 L-------SLEHVVLSASSSK-----------------ESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADE  360 (1351)
T ss_pred             h-------ccceeEEeccccc-----------------ccccCccceeecchhhhcccccCCCcccchhhcCcccccccc
Confidence            8       3444544332100                 0001122233333  77776655443322  23355677888


Q ss_pred             HHhCCCCCc--chhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCC
Q 013678          289 VILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT  366 (438)
Q Consensus       289 ~~~~~~~~~--~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (438)
                      ......+..  ..|+|.+|..+..+..|..+-...      ..+...+.                               
T Consensus       361 ~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~------~~~~~~l~-------------------------------  403 (1351)
T KOG1035|consen  361 DLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKS------AVPVSLLD-------------------------------  403 (1351)
T ss_pred             ccccccchhhhhhHHHHHHHHHhhhhhcCcccccc------cchhhhhc-------------------------------
Confidence            776665543  479999999999888776432110      00000000                               


Q ss_pred             ChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCCce
Q 013678          367 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT  430 (438)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~~~  430 (438)
                                            ........+.+.+|+.-++++|+++.+++.|+|.+-....+.
T Consensus       404 ----------------------~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~~~~~~  445 (1351)
T KOG1035|consen  404 ----------------------VLSTSELLDALPKCLDEDSEERLSALELLTHPFLRFPTDNES  445 (1351)
T ss_pred             ----------------------cccchhhhhhhhhhcchhhhhccchhhhhhchhccccccccc
Confidence                                  000115678999999999999999999999999987654443

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.23  E-value=1.2e-05  Score=67.63  Aligned_cols=130  Identities=22%  Similarity=0.243  Sum_probs=89.8

Q ss_pred             EEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEcc
Q 013678           95 KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK  174 (438)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~  174 (438)
                      ++.+.|++|++|.||++...  |..+|+|+-+ .+..+..+..|.++|..+.-.++.    .+++.+-.    .++.|||
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr-~ds~r~~l~kEakiLeil~g~~~~----p~vy~yg~----~~i~me~   93 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWR--GGEVALKVRR-RDSPRRNLEKEAKILEILAGEGVT----PEVYFYGE----DFIRMEY   93 (201)
T ss_pred             hhhhhhhcccccEEEEeecc--CceEEEEEec-CCcchhhHHHHHHHHHHhhhcCCC----ceEEEech----hhhhhhh
Confidence            56788999999999999854  5679999754 456678889999999999877652    34444433    2355999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC--CcEEEecCcccccCCccccccCCCCCCcc
Q 013678          175 L-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKP--ENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       175 ~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp--~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      . |..|.+.-...     +-    +-...++..---|-..||-|+.|.-  .||++..                      
T Consensus        94 i~G~~L~~~~~~~-----~r----k~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~----------------------  142 (201)
T COG2112          94 IDGRPLGKLEIGG-----DR----KHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVND----------------------  142 (201)
T ss_pred             hcCcchhhhhhcc-----cH----HHHHHHHHHHHHHHHhccchhhhcCCceeEEecC----------------------
Confidence            9 77887765421     12    2233445554456678999999864  3555522                      


Q ss_pred             cCCCCCCCeEEecCCCCcccC
Q 013678          252 KNLPKSSAIKLIDFGSTTFEH  272 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~  272 (438)
                            ..+.|+||..|+...
T Consensus       143 ------~~~~iIDFd~At~k~  157 (201)
T COG2112         143 ------RDVYIIDFDSATFKK  157 (201)
T ss_pred             ------CcEEEEEccchhhcc
Confidence                  268999999887543

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.19  E-value=1.8e-05  Score=72.44  Aligned_cols=75  Identities=15%  Similarity=0.092  Sum_probs=52.0

Q ss_pred             eeeeecc-eEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-C
Q 013678           99 KMGEGTF-GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-G  176 (438)
Q Consensus        99 ~lg~G~~-g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~  176 (438)
                      .|..|.+ +.||++...  +..+.+|+.....  .....+|+.+++.+... +.   +.+++++....+..++|||++ |
T Consensus         5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~-~~---vP~v~~~~~~~~~~~lv~e~i~G   76 (244)
T cd05150           5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP--TYELEREAERLRWLAGK-LP---VPEVIDYGSDDGRAWLLTSAVPG   76 (244)
T ss_pred             ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc--ccchHHHHHHHHHHHhc-CC---CCeEEEEEecCCccEEEEEeeCC
Confidence            3445555 788998643  3678899876432  34567899999999765 32   356666666666789999999 7


Q ss_pred             CCHHH
Q 013678          177 PSLYD  181 (438)
Q Consensus       177 ~~L~~  181 (438)
                      .+|..
T Consensus        77 ~~l~~   81 (244)
T cd05150          77 VPAAA   81 (244)
T ss_pred             ccHhH
Confidence            66654

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=98.18  E-value=2.2e-05  Score=73.38  Aligned_cols=141  Identities=23%  Similarity=0.282  Sum_probs=102.1

Q ss_pred             EEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---------------------------hhhHHHHHHHHHHHHHHHh
Q 013678           95 KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---------------------------NKYREAAMIEIDVLQRLAR  147 (438)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------------------------~~~~~~~~~E~~~l~~l~~  147 (438)
                      .+-..|..|--+.||.|.. .+|..+|||+++.+                           ....--+..|++.|++|+.
T Consensus       147 ~inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~  225 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN  225 (520)
T ss_pred             ecccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence            3446788899999999985 56777999987520                           0112335679999999999


Q ss_pred             cCCCCcceEEecceeccCCeEEEEEccCCCCHH--HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCceecCCCCCc
Q 013678          148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY--DFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPEN  224 (438)
Q Consensus       148 ~~i~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~--~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~N  224 (438)
                      ..|..|-.+-+.       .-.|||+|+|.+=+  -.|+.   -.++...+..+..|++.-+.-|- .+++||.||.--|
T Consensus       226 aGIP~PePIlLk-------~hVLVM~FlGrdgw~aPkLKd---~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN  295 (520)
T KOG2270|consen  226 AGIPCPEPILLK-------NHVLVMEFLGRDGWAAPKLKD---ASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFN  295 (520)
T ss_pred             cCCCCCCceeee-------cceEeeeeccCCCCcCccccc---ccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhh
Confidence            988665544442       25699999964322  12222   25778889999999998888774 6789999999999


Q ss_pred             EEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC
Q 013678          225 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD  274 (438)
Q Consensus       225 Ili~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~  274 (438)
                      +|+..                            +.++|+|.+.+...+.+
T Consensus       296 ~Lyhd----------------------------G~lyiIDVSQSVE~DHP  317 (520)
T KOG2270|consen  296 LLYHD----------------------------GKLYIIDVSQSVEHDHP  317 (520)
T ss_pred             heEEC----------------------------CEEEEEEccccccCCCh
Confidence            99843                            46899999877655443

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.17  E-value=2e-05  Score=71.73  Aligned_cols=76  Identities=14%  Similarity=0.073  Sum_probs=46.2

Q ss_pred             eeeeeecce-EEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhc-CCCCcceEEecceeccCCeEEEEEccC
Q 013678           98 SKMGEGTFG-QVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus        98 ~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      +.|+.|+.. .||+..     ..+++|+.+. ........+|.+++..+... .+..|.++..-...+.....++||+++
T Consensus         3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i   76 (235)
T cd05155           3 EPVDSGGTDNATFRLG-----DDMSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL   76 (235)
T ss_pred             eeccCCCcccceEEcC-----CceEEEcCCc-cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence            457777766 488762     2477887654 23345788999999999753 343444333211111123458899999


Q ss_pred             -CCCH
Q 013678          176 -GPSL  179 (438)
Q Consensus       176 -~~~L  179 (438)
                       |.++
T Consensus        77 ~G~~l   81 (235)
T cd05155          77 EGETA   81 (235)
T ss_pred             cCCCC
Confidence             7555

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PLN02876 acyl-CoA dehydrogenase

Probab=98.15  E-value=4.1e-05  Score=82.32  Aligned_cols=80  Identities=15%  Similarity=0.098  Sum_probs=54.7

Q ss_pred             EEeeeeeecceEEEEEEECCCC--cEEEEEEeecch--hhHHHHHHHHHHHHHHH-hcCCCCcceEEecceeccC---Ce
Q 013678           96 ILSKMGEGTFGQVVECFDNEKK--ELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYR---NH  167 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~--~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~---~~  167 (438)
                      -++.|+.|.++.+|+......+  ..+++|+.....  .....+.+|+.+++.+. |.++..   .+++.++.+.   +.
T Consensus        42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpV---P~v~~~~~d~~v~G~  118 (822)
T PLN02876         42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPV---PKVYCLCTDASVIGT  118 (822)
T ss_pred             eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCC---CcEEEEecCCCcCCC
Confidence            3577899999999998765432  457888764322  22356789999999997 566533   4555555543   46


Q ss_pred             EEEEEccC-CCC
Q 013678          168 ICIVFEKL-GPS  178 (438)
Q Consensus       168 ~~lv~e~~-~~~  178 (438)
                      .|+||||+ |..
T Consensus       119 ~flVME~v~G~~  130 (822)
T PLN02876        119 AFYIMEYLEGRI  130 (822)
T ss_pred             ceEEEEecCCcc
Confidence            78999999 543

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=98.07  E-value=5.4e-05  Score=68.78  Aligned_cols=75  Identities=15%  Similarity=0.329  Sum_probs=50.0

Q ss_pred             EeeeeeecceEEEEEEECC-CCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678           97 LSKMGEGTFGQVVECFDNE-KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      ++.|..|-...+|++.... .++.|++|+........-...+|+.++..+...++ .   .+++..+..    .+||||+
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl-~---P~v~~~~~~----~~l~e~i   74 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGL-A---PKLYATFQN----GLIYEFI   74 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCC-C---CeEEEEeCC----cEEEEee
Confidence            4667888888999997543 35678999876433222334579999999987766 2   344443332    3799999


Q ss_pred             -CCCH
Q 013678          176 -GPSL  179 (438)
Q Consensus       176 -~~~L  179 (438)
                       |.++
T Consensus        75 ~G~~l   79 (235)
T cd05157          75 PGRTL   79 (235)
T ss_pred             CCCcC
Confidence             6554

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.05  E-value=5.1e-05  Score=75.78  Aligned_cols=145  Identities=16%  Similarity=0.156  Sum_probs=88.8

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecc--------------------------------hhhH------HHHHHHH
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSI--------------------------------NKYR------EAAMIEI  139 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------------------------------~~~~------~~~~~E~  139 (438)
                      +.||.-+.|.|++|+.+. |+.||||+-+..                                ++..      -++.+|.
T Consensus       167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            569999999999999765 999999986521                                0001      1234455


Q ss_pred             HHHHHHHh----cCCC-CcceEEecceeccCCeEEEEEccC-CCCHHH--HHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 013678          140 DVLQRLAR----HDIG-GTRCVQIRNWFDYRNHICIVFEKL-GPSLYD--FLRKNSYRSFPIDLVRELGRQLLESVAFMH  211 (438)
Q Consensus       140 ~~l~~l~~----~~i~-~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~--~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH  211 (438)
                      +...+..+    -+.. .-.|.+++-  .....-.|+|||| |..+.|  .+.+.   .++...+...+.+..  +.-|-
T Consensus       246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~--~~st~RVLtME~~~G~~i~Dl~~i~~~---gi~~~~i~~~l~~~~--~~qIf  318 (538)
T KOG1235|consen  246 KNAERFRENFKDFSLLTYVLVPKVYW--DLSTKRVLTMEYVDGIKINDLDAIDKR---GISPHDILNKLVEAY--LEQIF  318 (538)
T ss_pred             HhHHHHHHHHHhcccccceeCCeehh--hcCcceEEEEEecCCccCCCHHHHHHc---CCCHHHHHHHHHHHH--HHHHH
Confidence            55544433    2210 011233333  2234678999999 765544  44444   366654444333322  22333


Q ss_pred             hCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC
Q 013678          212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ  273 (438)
Q Consensus       212 ~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~  273 (438)
                      ..|++|+|-.|.||++..++                       ..+..+.+-|||+......
T Consensus       319 ~~GffHaDPHPGNilv~~~~-----------------------~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  319 KTGFFHADPHPGNILVRPNP-----------------------EGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             hcCCccCCCCCCcEEEecCC-----------------------CCCccEEEEcccccccccH
Confidence            57899999999999997543                       2345789999998766543

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=97.93  E-value=8.8e-05  Score=72.31  Aligned_cols=174  Identities=21%  Similarity=0.242  Sum_probs=109.0

Q ss_pred             HHHHHHHHHHHHHHhcCCCCcceEEecceeccC-CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 013678          133 EAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH  211 (438)
Q Consensus       133 ~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~-~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH  211 (438)
                      .+..-....++.+.|.+.     ..++++-... ....+|||+++.+|++.+..+.   +-..          +++    
T Consensus        27 ~~ilgr~~~lktl~~~~l-----~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~~---l~~~----------s~~----   84 (725)
T KOG1093|consen   27 IQILGRFQYLKSLQHDNL-----CQYLDFSRGKHERVIVVMEHYTMSLEDILKTGN---LKDE----------SLL----   84 (725)
T ss_pred             HHHhhhhHHHHhhcCccc-----eeeEeeecCccceEEEEehhhccchHHHHHhcc---cchh----------hhc----
Confidence            445556778889988887     7776655432 3589999999999999987654   1111          011    


Q ss_pred             hCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHh
Q 013678          212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL  291 (438)
Q Consensus       212 ~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~  291 (438)
                      .+|+.|     -||+                                  +++| .++..             |  |    
T Consensus        85 ~~~~~~-----~~~~----------------------------------~~td-~~~t~-------------~--~----  105 (725)
T KOG1093|consen   85 AHGVLH-----LNII----------------------------------YITD-HFLTK-------------Y--P----  105 (725)
T ss_pred             ccccce-----ehhh----------------------------------hccc-ccccc-------------C--C----
Confidence            222222     2222                                  2222 00000             0  0    


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhH
Q 013678          292 GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM  371 (438)
Q Consensus       292 ~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (438)
                       ....+|+||||+|.++.++..|...+......+++..+.+.. ..+.+...-.+.+                       
T Consensus       106 -~~~~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~-~~d~~~~~~a~e~-----------------------  160 (725)
T KOG1093|consen  106 -SPIGPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYY-TDDQELLSTAMEH-----------------------  160 (725)
T ss_pred             -CCCCcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHH-----------------------
Confidence             012259999999999999999998887777777666665542 2222211111111                       


Q ss_pred             HHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          372 RAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                                    ...-..+..+.+++.+|+-..|..||...++.+++-|....
T Consensus       161 --------------~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev~  201 (725)
T KOG1093|consen  161 --------------LIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTEVY  201 (725)
T ss_pred             --------------HHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHHHH
Confidence                          11123455788999999999999999999999999887653

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.85  E-value=0.00047  Score=67.06  Aligned_cols=75  Identities=20%  Similarity=0.201  Sum_probs=52.7

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeec------c--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRS------I--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .+.||.|.+..||++.+...++.|+||.-..      .  ....+....|.+.|..+....  ..++.+++.+.  ....
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~--p~~VPkV~~~D--~~~~  106 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYV--PDLVPKVYHYD--EELA  106 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhC--CCCCCeEEEEC--CCCC
Confidence            4679999999999999865446799997431      1  124466778899988876431  13456666653  3557


Q ss_pred             EEEEccC
Q 013678          169 CIVFEKL  175 (438)
Q Consensus       169 ~lv~e~~  175 (438)
                      ++|||++
T Consensus       107 ~lVME~L  113 (401)
T PRK09550        107 VTVMEDL  113 (401)
T ss_pred             EEEEecC
Confidence            8999999

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.81  E-value=9.4e-05  Score=69.77  Aligned_cols=79  Identities=14%  Similarity=0.123  Sum_probs=52.4

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecc---eeccCCeEEEEEc
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN---WFDYRNHICIVFE  173 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~---~~~~~~~~~lv~e  173 (438)
                      ++.|..|....+|+...  .+..+++|+...  ........|+.++..|.+.++..+.++...+   +....+..++|++
T Consensus        19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~   94 (296)
T cd05153          19 FEGISAGIENTNYFVTT--DSGRYVLTLFEK--VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE   94 (296)
T ss_pred             eecccCccccceEEEEe--CCCcEEEEEcCC--CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence            56788888889999864  234689998764  3345677899999999887663333332211   1123456789999


Q ss_pred             cC-CCCH
Q 013678          174 KL-GPSL  179 (438)
Q Consensus       174 ~~-~~~L  179 (438)
                      ++ |..+
T Consensus        95 ~i~G~~~  101 (296)
T cd05153          95 FLAGEHL  101 (296)
T ss_pred             eCCCCCC
Confidence            99 6543

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.78  E-value=0.00013  Score=67.22  Aligned_cols=71  Identities=13%  Similarity=0.066  Sum_probs=45.6

Q ss_pred             eeeeecceEEEEEEECCCCcEEEEEEeecchhhH-HHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-C
Q 013678           99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-G  176 (438)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~  176 (438)
                      .+..|-.+.+|+..  .+++.+++|+........ -...+|..+++.+...++ .|.++   ....    -++||||+ |
T Consensus         3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~-~P~~i---~~~~----~~~v~e~i~G   72 (256)
T TIGR02721         3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGL-APKPI---LVNE----HWLLVEWLEG   72 (256)
T ss_pred             cCCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCC-CCceE---EEeC----CEEEEEeccC
Confidence            35567778899886  446678899765432221 235779999999987765 24433   2222    26899999 6


Q ss_pred             CCH
Q 013678          177 PSL  179 (438)
Q Consensus       177 ~~L  179 (438)
                      ..+
T Consensus        73 ~~~   75 (256)
T TIGR02721        73 EVI   75 (256)
T ss_pred             ccc
Confidence            554

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.75  E-value=0.00025  Score=67.08  Aligned_cols=75  Identities=17%  Similarity=0.198  Sum_probs=50.1

Q ss_pred             EeeeeeecceEEEEEEECC------CCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           97 LSKMGEGTFGQVVECFDNE------KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      ++.|..|-...||++....      .++.|++|+............+|..++..+...++ .   .+++.++..    .+
T Consensus         3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~-~---P~~~~~~~~----~~   74 (302)
T cd05156           3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNL-G---PKLYGIFPN----GR   74 (302)
T ss_pred             EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCC-C---CceEEEeCC----Cc
Confidence            3556677777889887533      25789999976544444556789999999988765 2   344444432    25


Q ss_pred             EEccC-CCCH
Q 013678          171 VFEKL-GPSL  179 (438)
Q Consensus       171 v~e~~-~~~L  179 (438)
                      |+||+ |.++
T Consensus        75 v~e~i~G~~l   84 (302)
T cd05156          75 IEEFIPSRTL   84 (302)
T ss_pred             hhheeCCCcC
Confidence            78888 6554

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PRK05231 homoserine kinase; Provisional

Probab=97.63  E-value=0.00083  Score=64.05  Aligned_cols=77  Identities=14%  Similarity=0.098  Sum_probs=50.4

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecc---eeccCCeEEEEEc
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN---WFDYRNHICIVFE  173 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~---~~~~~~~~~lv~e  173 (438)
                      ++.|+.|....+|+.... +| .+++|++.  ....+....|+.++..|...++..|.++.-.+   +....+..+++++
T Consensus        27 ~~~l~~G~~n~~y~v~t~-~g-~~vLK~~~--~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~  102 (319)
T PRK05231         27 LKGIAEGIENSNFFLTTT-QG-EYVLTLFE--RLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVT  102 (319)
T ss_pred             cchhccccccceEEEEeC-CC-cEEEEEec--cCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEE
Confidence            456777888899998743 33 58899876  22334556688889898877765454443211   1123456899999


Q ss_pred             cC-CC
Q 013678          174 KL-GP  177 (438)
Q Consensus       174 ~~-~~  177 (438)
                      ++ |.
T Consensus       103 ~l~G~  107 (319)
T PRK05231        103 FLEGK  107 (319)
T ss_pred             ecCCC
Confidence            99 54

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.59  E-value=0.0011  Score=62.77  Aligned_cols=79  Identities=14%  Similarity=0.061  Sum_probs=50.8

Q ss_pred             EEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecc---eeccCCeEEEEE
Q 013678           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN---WFDYRNHICIVF  172 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~---~~~~~~~~~lv~  172 (438)
                      .++.++.|....+|++.. .++ .+++|+..... ..+....|+.++..|...++..+.++...+   +....+..++||
T Consensus        26 ~i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~-~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~  102 (307)
T TIGR00938        26 SLKGIAEGVENSNYLLTT-DVG-RYILTLYEKRV-KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLV  102 (307)
T ss_pred             eccccCCccccceEEEEe-CCC-cEEEEEecCCC-CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEE
Confidence            456778888789999864 344 57889875422 234566788899999876663343333221   112346789999


Q ss_pred             ccC-CC
Q 013678          173 EKL-GP  177 (438)
Q Consensus       173 e~~-~~  177 (438)
                      +|+ |.
T Consensus       103 e~i~G~  108 (307)
T TIGR00938       103 EFLQGL  108 (307)
T ss_pred             EeCCCC
Confidence            998 53

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.52  E-value=0.00012  Score=67.61  Aligned_cols=130  Identities=21%  Similarity=0.238  Sum_probs=89.7

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeec---------ch--------------hhHHHHHHHHHHHHHHHhcCC
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---------IN--------------KYREAAMIEIDVLQRLARHDI  150 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---------~~--------------~~~~~~~~E~~~l~~l~~~~i  150 (438)
                      |.+.++||-|--+.||.+-+ ..|...++|+=+.         .+              -.+-.+.+|...|+.|..+..
T Consensus        94 ~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf  172 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF  172 (465)
T ss_pred             hhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence            57789999999999999986 4567788885321         00              122345679999999987654


Q ss_pred             CCcceEEecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 013678          151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  229 (438)
Q Consensus       151 ~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  229 (438)
                      .-   .+.++    .+..|+|||++ |-.|.+.-+-     ..   +..+...+..-+--|-.+|+||+|..-=||++..
T Consensus       173 pV---PkpiD----~~RH~Vvmelv~g~Pl~~v~~v-----~d---~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~d  237 (465)
T KOG2268|consen  173 PV---PKPID----HNRHCVVMELVDGYPLRQVRHV-----ED---PPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKD  237 (465)
T ss_pred             CC---CCccc----ccceeeHHHhhcccceeeeeec-----CC---hHHHHHHHHHHHHHHHHcCceecccchheeEEec
Confidence            22   23222    35578999999 7777765321     12   3344455555566788899999999999999987


Q ss_pred             CcccccCCcc
Q 013678          230 AEYVKVPDYK  239 (438)
Q Consensus       230 ~~~~kl~df~  239 (438)
                      ++.+++.||.
T Consensus       238 d~~i~vIDFP  247 (465)
T KOG2268|consen  238 DDKIVVIDFP  247 (465)
T ss_pred             CCCEEEeech
Confidence            7766555553

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=97.38  E-value=0.00012  Score=79.74  Aligned_cols=150  Identities=13%  Similarity=0.013  Sum_probs=102.8

Q ss_pred             HHHHHHHHHHhcCCCCcceEEecceec--cCCeEEEEEccC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH
Q 013678          137 IEIDVLQRLARHDIGGTRCVQIRNWFD--YRNHICIVFEKL-GPSLYDFLRKNSY--RSFPIDLVRELGRQLLESVAFMH  211 (438)
Q Consensus       137 ~E~~~l~~l~~~~i~~~~iv~~~~~~~--~~~~~~lv~e~~-~~~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~LH  211 (438)
                      .|...++...|.++     .....-..  .....+++++|+ +|.+.+.+.+...  ..+...-+.....+.+.+..-+|
T Consensus      1278 ~e~de~~~~~h~~~-----~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~l 1352 (2724)
T KOG1826|consen 1278 SERDELREAKHYLT-----EVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVIL 1352 (2724)
T ss_pred             hhhhhhhhhhceee-----ecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhh
Confidence            34444445566654     33222222  234678999999 9999999875431  22333344444445477788877


Q ss_pred             hCC-----ceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC---cccccCCC
Q 013678          212 ELR-----LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRH  283 (438)
Q Consensus       212 ~~~-----ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~  283 (438)
                      ++.     -+|++||+-|.+|..+.                           .++++++|+.+......   ...++++.
T Consensus      1353 s~tnlg~T~v~~~Lkf~lpmIVtny---------------------------~v~~gk~gLdKIknp~~sf~Gl~l~sp~ 1405 (2724)
T KOG1826|consen 1353 SLTNLGNTNVSKSLKFTLPMIVTNY---------------------------NVKLGKGGLDKIKNPVLSFFGLELCSPI 1405 (2724)
T ss_pred             hcccCCccchhhhhhhhccceecCC---------------------------cccccccccccccCchHhhhhhhhCCHH
Confidence            642     78999999999996544                           56667777766332222   23477889


Q ss_pred             cchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          284 YRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       284 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                      |++|++.....++.++|||..|+.+|+...|..+|
T Consensus      1406 ~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1406 YVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence            99999998888998899999999999998887776

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.35  E-value=0.0027  Score=60.50  Aligned_cols=82  Identities=21%  Similarity=0.161  Sum_probs=52.0

Q ss_pred             eeeeecceEEEEEEECCCCcEEEEEEeec--------chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           99 KMGEGTFGQVVECFDNEKKELVAIKIVRS--------INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--------~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      .||.|....||++.+..+++.|+||.-..        .....++...|...|+....-  ....+.+++.  .+.....+
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~--~P~~vP~vy~--~D~e~~~~   77 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEH--VPHLVPRIFH--FDTEMAVT   77 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhcc--CccccCeEEE--Ecccccee
Confidence            57999999999999764446799996421        123345566788888765542  1124455554  33455679


Q ss_pred             EEccC--CCCHHHHHH
Q 013678          171 VFEKL--GPSLYDFLR  184 (438)
Q Consensus       171 v~e~~--~~~L~~~l~  184 (438)
                      |||++  ...|.+.+.
T Consensus        78 vMEdL~~~~ilR~~Li   93 (370)
T TIGR01767        78 VMEDLSHHKIARKGLI   93 (370)
T ss_pred             hHhhCccchHHHHHHH
Confidence            99999  334545443

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PLN02236 choline kinase

Probab=97.33  E-value=0.0023  Score=61.58  Aligned_cols=76  Identities=16%  Similarity=0.065  Sum_probs=49.8

Q ss_pred             EEeeeeeecceEEEEEEECC----CCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           96 ILSKMGEGTFGQVVECFDNE----KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      -+..|..|-...+|++....    .++.|++|+........-...+|..+++.+...+++    .++++.+..+    .|
T Consensus        40 ~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~----P~~~~~~~~g----~v  111 (344)
T PLN02236         40 QVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQG----PRLLGRFPNG----RV  111 (344)
T ss_pred             EEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCC----CceEEEECCc----eE
Confidence            34566668888899986432    346799998865433322346799999999988773    3444555433    57


Q ss_pred             EccC-CCCH
Q 013678          172 FEKL-GPSL  179 (438)
Q Consensus       172 ~e~~-~~~L  179 (438)
                      .+|+ +.+|
T Consensus       112 ~efi~g~~l  120 (344)
T PLN02236        112 EEFIHARTL  120 (344)
T ss_pred             EEeeCCCCC
Confidence            8888 6554

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=97.24  E-value=0.0037  Score=59.88  Aligned_cols=76  Identities=12%  Similarity=0.227  Sum_probs=48.6

Q ss_pred             EEeeeeeecceEEEEEEECCC---CcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEE
Q 013678           96 ILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      .++.|..|-...+|++.....   +..|++|+........-...+|..+++.+...+++    .++++++..+    +|.
T Consensus        18 ~i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~----P~~l~~~~~G----~i~   89 (330)
T PLN02421         18 SVERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFG----AKLLGVFGNG----MIQ   89 (330)
T ss_pred             EEEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCC----CceeEEeCCc----Eee
Confidence            345565577778898864332   33789998765433333346799999999988774    3455555332    578


Q ss_pred             ccC-CCCH
Q 013678          173 EKL-GPSL  179 (438)
Q Consensus       173 e~~-~~~L  179 (438)
                      +|+ |.+|
T Consensus        90 ~fi~g~~l   97 (330)
T PLN02421         90 SFINARTL   97 (330)
T ss_pred             hhhcCCCC
Confidence            888 5544

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.15  E-value=0.00091  Score=58.29  Aligned_cols=94  Identities=21%  Similarity=0.166  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-CCCHHHH---HHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 013678          136 MIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDF---LRKNSYRSFPIDLVRELGRQLLESVAFMH  211 (438)
Q Consensus       136 ~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~---l~~~~~~~l~~~~~~~i~~qi~~aL~~LH  211 (438)
                      ..|.-+++.+.+.    .++.+++|++-.    ++|+||. .+++...   +...  ...++..+.+|+.+++..+.+|+
T Consensus         7 ~~E~lll~~l~~~----~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~--~~~~w~~R~~iA~~lL~~l~~l~   76 (188)
T PF12260_consen    7 NNEPLLLQLLQGS----EPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQF--LQSPWEQRAKIALQLLELLEELD   76 (188)
T ss_pred             ccHHHHHHHcCCC----CCCCCeeeECCC----EEEEEeecCccccccccccccc--cccCHHHHHHHHHHHHHHHHHHh
Confidence            3477888888764    256999998843    5688999 4555421   1111  14689999999999999999999


Q ss_pred             h---CCceecCCCCCcEEEecCcccccCCcc
Q 013678          212 E---LRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       212 ~---~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                      .   ..+.-.|++++|+-++.+|.+|+.|..
T Consensus        77 ~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld  107 (188)
T PF12260_consen   77 HGPLGFFYLCDVSPDNFGVNDDGRLKLIDLD  107 (188)
T ss_pred             cCCCCcEEEeecchHHeEEeCCCcEEEEech
Confidence            7   348889999999999887765555554

Proteins in this uncharacterised family are described as transmembrane proteins.

>PRK10593 hypothetical protein; Provisional

Probab=97.08  E-value=0.0051  Score=57.96  Aligned_cols=106  Identities=18%  Similarity=0.164  Sum_probs=73.7

Q ss_pred             EEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcC-CCCcceEEecceec---cCCeEEE
Q 013678           95 KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-IGGTRCVQIRNWFD---YRNHICI  170 (438)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~~~iv~~~~~~~---~~~~~~l  170 (438)
                      .-.+.||.|..+.||..... ++ .+++|..+. ......+..|...|+.|.... +   .+.++++++.   ..+..+|
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~-~~-~~~~k~~~~-~~~~~~~~~Ea~~L~~L~~~~~v---pVP~V~~~~~~~~~~g~~~L   90 (297)
T PRK10593         17 SRVECISEQPYAALWALYDS-QG-NPMPLMARS-FSTPGVAQQEAWKLSMLARSGTV---RMPTVYGVMTHEQSPGPDVL   90 (297)
T ss_pred             heeeecCCccceeEEEEEcC-CC-CEEEEEecc-cccchHHHHHHHHHHHHccCCCC---CcCcEEEEeccCCcCCCeEE
Confidence            34577999999999998643 33 467787432 223467889999999997643 3   3455555544   3467899


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL  213 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  213 (438)
                      |||++ |.++.+.       ..+......+..+++.+|.-||+.
T Consensus        91 VmE~i~G~~~~~~-------~~~~~~~~~l~~~l~~~La~LH~~  127 (297)
T PRK10593         91 LLERLRGVSVEAP-------ARTPERWEQLKDQIVEGLLAWHRI  127 (297)
T ss_pred             EEeccCCEecCCC-------CCCHHHHHHHHHHHHHHHHHHhCC
Confidence            99999 7776641       133444566778888999999984

>PRK12396 5-methylribose kinase; Reviewed

Probab=97.03  E-value=0.0052  Score=59.40  Aligned_cols=83  Identities=23%  Similarity=0.207  Sum_probs=54.3

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEee----c---chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVR----S---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~----~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ++.||.|.-..||++.+...++.|+||.-.    .   .....++...|..+|+.+..-..  .++.+++.  .+.....
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P--~~VP~vy~--~D~e~~~  109 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAP--GLVPKVYL--FDSVMNC  109 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCC--CcCCeEEE--ECcHHhh
Confidence            678999999999999985445679999642    1   12345667789999987765321  23455554  3345567


Q ss_pred             EEEccC-C-CCHHHHH
Q 013678          170 IVFEKL-G-PSLYDFL  183 (438)
Q Consensus       170 lv~e~~-~-~~L~~~l  183 (438)
                      +|||++ . ..|.+.|
T Consensus       110 ~vMEdL~~~~ilR~~L  125 (409)
T PRK12396        110 CVMEDLSDHTILRTAL  125 (409)
T ss_pred             HHHHhCcccHHHHHHH
Confidence            889988 3 3344443

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=97.03  E-value=0.0074  Score=56.15  Aligned_cols=47  Identities=26%  Similarity=0.150  Sum_probs=30.5

Q ss_pred             eeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhc
Q 013678          100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH  148 (438)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~  148 (438)
                      .++|-...|+.+. ..+|+.+++|.-+. ........+|.++|..+...
T Consensus        19 ~~~g~~~~v~~i~-~~~g~~~VlR~p~~-~~~~~~l~rE~~vL~~L~~~   65 (276)
T cd05152          19 NESGLDFQVVFAK-DTDGVPWVLRIPRR-PDVSERAAAEKRVLALVRKH   65 (276)
T ss_pred             cCCcceeEEEEEE-cCCCCeEEEEecCC-HHHHHHHHHHHHHHHHHHhc
Confidence            3455455566553 23467788887653 23345678999999999753

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PLN02756 S-methyl-5-thioribose kinase

Probab=96.84  E-value=0.018  Score=55.98  Aligned_cols=74  Identities=16%  Similarity=0.149  Sum_probs=49.4

Q ss_pred             EEeeeeeecceEEEEEEECCCCcEEEEEEeec-----ch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRS-----IN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ..+.||.|....||+..+.  +..|+||.-..     ..   ........|...|+.+....  ..++.+++.+.+  +.
T Consensus        36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~--p~~VPkVy~~de--d~  109 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLC--PDHVPEVYHFDR--TM  109 (418)
T ss_pred             eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcC--CCCCCeEEEECC--CC
Confidence            4678999999999999863  44588997541     11   13445566777777765321  134577777666  44


Q ss_pred             EEEEEccC
Q 013678          168 ICIVFEKL  175 (438)
Q Consensus       168 ~~lv~e~~  175 (438)
                      .+++||++
T Consensus       110 ~vlvME~L  117 (418)
T PLN02756        110 ALIGMRYL  117 (418)
T ss_pred             CEEEEeec
Confidence            67889999

>PRK11768 serine/threonine protein kinase; Provisional

Probab=96.80  E-value=0.037  Score=52.88  Aligned_cols=72  Identities=17%  Similarity=0.104  Sum_probs=45.8

Q ss_pred             ceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecc--eeccCCeEEEEEccC-CC
Q 013678          105 FGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN--WFDYRNHICIVFEKL-GP  177 (438)
Q Consensus       105 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~--~~~~~~~~~lv~e~~-~~  177 (438)
                      -..||+... .++..+++|+.+...........|+..+..|....+..+..+..-+  +...++..+.|++++ |.
T Consensus        38 eN~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~  112 (325)
T PRK11768         38 ENRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGR  112 (325)
T ss_pred             cceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCC
Confidence            346888864 4456799998865444566777899999999876653211122222  122346778899998 54

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.76  E-value=0.012  Score=55.42  Aligned_cols=76  Identities=13%  Similarity=0.059  Sum_probs=45.6

Q ss_pred             EEEeeeeeecceEEEEEEECCCCcEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC--eEE
Q 013678           95 KILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN--HIC  169 (438)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~--~~~  169 (438)
                      .+++.+..|....+|...+.  ++.+++. ...   .........+|..+++.+..-.+   .+...++++.++.  ..+
T Consensus        28 ~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~v---P~p~~~~~~~~~~~g~pf  101 (321)
T COG3173          28 LIVEEISGGWSNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDV---PVPRAFGLCGEGYLGTPF  101 (321)
T ss_pred             ceeeeccCCcccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCC---CCcccccccccCCCCCce
Confidence            34555545544455655433  7778887 331   12334556778888888766433   2345555555544  779


Q ss_pred             EEEccC-C
Q 013678          170 IVFEKL-G  176 (438)
Q Consensus       170 lv~e~~-~  176 (438)
                      .||+++ |
T Consensus       102 ~v~~~veG  109 (321)
T COG3173         102 YVMEWVEG  109 (321)
T ss_pred             EEEEEecc
Confidence            999999 6

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=96.72  E-value=0.056  Score=51.18  Aligned_cols=67  Identities=10%  Similarity=0.237  Sum_probs=42.4

Q ss_pred             EEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecc---eeccCCeEEEEEccC-CCC
Q 013678          107 QVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN---WFDYRNHICIVFEKL-GPS  178 (438)
Q Consensus       107 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~---~~~~~~~~~lv~e~~-~~~  178 (438)
                      .||++.. ..| .+++|++...   ......|+..+..|...++.-+.++...+   +...++..++|++++ |.+
T Consensus        11 ~v~~v~t-~~g-~~~LK~~~~~---~~~~~~~~~~~~~L~~~g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~G~~   81 (313)
T TIGR02906        11 NVYKVET-DSG-NKCLKKINYP---PERLLFILGAQEHLRKNGFNIPKILKTKDGELYVKYNGDLYVLTEWIEGRE   81 (313)
T ss_pred             cEEEEEe-CCC-CeEEEEcCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEehhccCcC
Confidence            4888864 333 5889987532   34466688888888877764344444321   112356789999999 643

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PTZ00384 choline kinase; Provisional

Probab=96.43  E-value=0.058  Score=52.57  Aligned_cols=77  Identities=19%  Similarity=0.238  Sum_probs=47.3

Q ss_pred             EEEeeeeeecceEEEEEEECCCC-c-----EEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           95 KILSKMGEGTFGQVVECFDNEKK-E-----LVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~-~-----~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ..++.|..|-...+|++...... .     .|.+++........-...+|+.+++.+...+++    .++++.+..    
T Consensus        53 i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glg----P~l~~~f~~----  124 (383)
T PTZ00384         53 IEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFG----PKIIGRFGD----  124 (383)
T ss_pred             EEEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCC----CeEEEecCC----
Confidence            34556766888899998643321 2     244444322222122335699999999888763    566666653    


Q ss_pred             EEEEccC-CCCH
Q 013678          169 CIVFEKL-GPSL  179 (438)
Q Consensus       169 ~lv~e~~-~~~L  179 (438)
                      ++|.||+ |.+|
T Consensus       125 g~l~efIeGr~l  136 (383)
T PTZ00384        125 FTIQEWVEGNTM  136 (383)
T ss_pred             EEEEEEeccccC
Confidence            5888998 6554

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=96.39  E-value=0.0079  Score=53.56  Aligned_cols=55  Identities=22%  Similarity=0.204  Sum_probs=35.9

Q ss_pred             CcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-CCCH
Q 013678          117 KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSL  179 (438)
Q Consensus       117 ~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L  179 (438)
                      ++.|+||+........-....|..+++.+...+++    .++++.+.++    +|.+|+ |.+|
T Consensus         2 ~~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~g~~----p~~~~~~~~g----~v~e~i~g~~l   57 (211)
T PF01633_consen    2 PEKYLVRIPGEGTENFIDRENENEALKLLSEAGLG----PKIIYFFENG----RVEEFIEGRTL   57 (211)
T ss_dssp             TSEEEEEEEESCGCSHHHHHHHHHHHHHHHHTTSS----S-EEEEETTE----EEEE--SSEE-
T ss_pred             CCEEEEEeCCCCcccccCHHHHHHHHHHHHHcCCC----CeEEEEcCCC----cEEEEeccccc
Confidence            45789999877655566677899999999987763    4555555443    466877 5443

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=96.24  E-value=0.032  Score=52.10  Aligned_cols=75  Identities=16%  Similarity=0.215  Sum_probs=50.4

Q ss_pred             EEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEcc
Q 013678           95 KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK  174 (438)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~  174 (438)
                      +-.+.++-|....+|+..  .+++.+.||+-.  ......+..|..-|+.|...+.  ..+.+++.+....+..+|||||
T Consensus        20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~--~~~~~~f~~Ea~gL~~L~~~~~--~~vP~vi~~G~~~~~~fLlle~   93 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNS--ESGRDMFEGEAEGLKALAEANP--IRVPKVIAWGEYDDDAFLLLEF   93 (288)
T ss_dssp             -EEEEE--SSSSEEEEEE--TTS-EEEEEEEE--GGGCCHHHHHHHHHHHHCHTTT--SBS--EEEEEE-SSCCEEEEE-
T ss_pred             eeeEecCCCChhheEEEE--CCCccEEEEecC--hhhHHHHHHHHHHHHHHHhcCC--CCCCeEEEEEeecCCceEEEEe
Confidence            345678999999999987  667789999865  3445678889999999955422  4557777777766677999999


Q ss_pred             C
Q 013678          175 L  175 (438)
Q Consensus       175 ~  175 (438)
                      +
T Consensus        94 l   94 (288)
T PF03881_consen   94 L   94 (288)
T ss_dssp             -
T ss_pred             e
Confidence            8

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PTZ00296 choline kinase; Provisional

Probab=95.92  E-value=0.085  Score=52.47  Aligned_cols=74  Identities=20%  Similarity=0.157  Sum_probs=49.6

Q ss_pred             EEeeeeeecceEEEEEEECC--------CCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           96 ILSKMGEGTFGQVVECFDNE--------KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~--------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      -++.|..|-.-.+|++....        .++.|++++........-....|..+++.+...+++    .++++.+..   
T Consensus       109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~gi~----P~l~~~f~g---  181 (442)
T PTZ00296        109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYRIA----PQLLNTFSG---  181 (442)
T ss_pred             EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCCCC----CceEEEeCC---
Confidence            45667777777888887442        146799998765443333456799999999988874    345555542   


Q ss_pred             EEEEEccC-CC
Q 013678          168 ICIVFEKL-GP  177 (438)
Q Consensus       168 ~~lv~e~~-~~  177 (438)
                       +.|.||+ |.
T Consensus       182 -g~I~efi~g~  191 (442)
T PTZ00296        182 -GRIEEWLYGD  191 (442)
T ss_pred             -CEEEEeeCCc
Confidence             3467888 55

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=95.85  E-value=0.038  Score=53.08  Aligned_cols=61  Identities=25%  Similarity=0.365  Sum_probs=45.5

Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HhCCceecCCCCCcEEEecCc
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM-HELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~L-H~~~ivHrDlkp~NIli~~~~  231 (438)
                      ..|+=+|. |-++..+++...   .++...++++.-.+.||.-+ --.+.+|.|+.|.||++..+.
T Consensus       320 ~vl~E~~~~Gl~v~~~v~~~~---~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~  382 (565)
T KOG1236|consen  320 LVLVETYERGLSVLRFVKWKS---QPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNK  382 (565)
T ss_pred             ceeeeeccccccHHhhhhccc---ChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecC
Confidence            45666677 889999988654   56667777777667776544 357899999999999996543

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=95.85  E-value=0.15  Score=48.60  Aligned_cols=79  Identities=19%  Similarity=0.143  Sum_probs=50.7

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcc-eEEecc----eeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-CVQIRN----WFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~-iv~~~~----~~~~~~~~~lv~  172 (438)
                      ..|.+ .-..||+.... +|+ +++|+.+.. ....+..-|+..+..|...++..+- +..+-|    .+..+.+.+-|+
T Consensus        32 ~~l~s-~eN~~f~~~~~-~g~-~iLki~~~~-~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf  107 (331)
T COG2334          32 RGLNS-EENSNFRVQTE-DGR-YILKIYRPG-WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALF  107 (331)
T ss_pred             ccccc-ccCceEEEEec-CCC-eEEEEecCC-CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEE
Confidence            33444 44568888754 344 499999876 6777888899999999887763321 222222    112223788899


Q ss_pred             ccC-CCCHH
Q 013678          173 EKL-GPSLY  180 (438)
Q Consensus       173 e~~-~~~L~  180 (438)
                      +|+ |..+.
T Consensus       108 ~~l~G~~~~  116 (331)
T COG2334         108 EYLPGRPLE  116 (331)
T ss_pred             EecCCcCcC
Confidence            999 65555

>PRK06148 hypothetical protein; Provisional

Probab=95.79  E-value=0.13  Score=56.81  Aligned_cols=81  Identities=15%  Similarity=0.107  Sum_probs=48.6

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhc--CCCCcceEEecc-----eecc-CC--e
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH--DIGGTRCVQIRN-----WFDY-RN--H  167 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~--~i~~~~iv~~~~-----~~~~-~~--~  167 (438)
                      +.|+. ..-.+|+... .+|..+++|+.+.. ........|...|..|...  .+..|.++...+     .... .+  +
T Consensus        31 ~~L~s-~~d~nf~v~~-~~g~~yVLKi~~~~-~~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~  107 (1013)
T PRK06148         31 TPLDG-ERDLNFRLTT-DDGADYILKIVNPS-EPRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPR  107 (1013)
T ss_pred             eecCC-cCCceEEEEe-CCCCeEEEEEcCCc-cchhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceE
Confidence            45643 4567788764 45667999998753 2334455677788777653  554455554322     1111 22  5


Q ss_pred             EEEEEccC-CCCHHH
Q 013678          168 ICIVFEKL-GPSLYD  181 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~  181 (438)
                      .+.+++|+ |..|.+
T Consensus       108 ~vrLl~~l~G~~l~~  122 (1013)
T PRK06148        108 LLRLLSWLPGTPLAE  122 (1013)
T ss_pred             EEEEEeccCCCcHHh
Confidence            77889999 766654

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.41  E-value=0.36  Score=42.95  Aligned_cols=73  Identities=19%  Similarity=0.170  Sum_probs=50.9

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      .+++.-|.--..|...+  ....|-+|+=.  ......+..|+.-|..|...+-  ..+.+++.+-...++.|+||||+
T Consensus        21 r~~v~gG~inea~~v~d--g~~~~FvK~n~--~~~~~~f~AEa~gL~~la~s~t--i~VP~vi~~G~~~~~sylVle~L   93 (286)
T COG3001          21 REEVSGGDINEAWRLRD--GTDPFFVKCNQ--REQLSMFTAEADGLELLARSNT--ITVPKVIAVGASRDHSYLVLEYL   93 (286)
T ss_pred             ccccCCccccceeEeec--CCcceEEEecc--hhhHHHHHHHHHHHHHHHhcCC--ccccceEEecCCCCeeEEEEeec
Confidence            34555555555666543  33557888632  3445678889999999988872  24466777778889999999998

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=95.26  E-value=0.23  Score=47.09  Aligned_cols=65  Identities=14%  Similarity=0.240  Sum_probs=39.6

Q ss_pred             cceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecc------eeccCCeEEEEEccC
Q 013678          104 TFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN------WFDYRNHICIVFEKL  175 (438)
Q Consensus       104 ~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~------~~~~~~~~~lv~e~~  175 (438)
                      .-+.||++.. ..| .+++|.+...   .+.+...+.++..|...++  +.++.++.      +...++..+++|+++
T Consensus        18 ~~~~v~~v~T-~~G-~~~Lk~~~~~---~~~l~~~~~~~~~L~~~G~--~~~~~~~~t~~G~~~~~~~~~~~~L~~wi   88 (309)
T TIGR02904        18 VTGKLFKVYT-DQG-VFALKKLYAD---RNTIESFVSQIQVLSEKGF--SRIVPVYPTKDGSYYLFHGHFLYYLMPWL   88 (309)
T ss_pred             ccCcEEEEEe-CCC-CEEEEEeccc---hHhHHHHHHHHHHHHHcCC--CcCCceeecCCCCeeeEECCEEEEEeCCc
Confidence            3568999864 444 5889988632   3344556677778877665  22233321      222355679999998

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=95.00  E-value=0.12  Score=45.68  Aligned_cols=110  Identities=16%  Similarity=0.199  Sum_probs=66.5

Q ss_pred             ecceEEEEEEECCCCcEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-CCCH
Q 013678          103 GTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSL  179 (438)
Q Consensus       103 G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L  179 (438)
                      |+.++.-.+..+. | ...+|+++....  ....+..+.+++.++.  .|     +++..  .++..+.++.|+| ....
T Consensus        73 ~gNsTl~~~kt~i-G-~L~lKKi~slp~~~~~~~y~nky~v~Armh--Gi-----lrL~N--Dn~~~yGvIlE~Cy~~~i  141 (308)
T PF07387_consen   73 NGNSTLLIGKTKI-G-PLFLKKIRSLPCCINDALYFNKYRVFARMH--GI-----LRLKN--DNNYKYGVILERCYKIKI  141 (308)
T ss_pred             CCceEEEEecccc-c-hhhhhhccCCCcccchhhhhhhhhHHHHhh--he-----eEeec--CCCceeEEEEeeccCccc
Confidence            3444444443333 3 345666654332  2345677888988875  33     88774  2455788999999 3211


Q ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh--CCceecCCCCCcEEEecCcccccCCc
Q 013678          180 YDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE--LRLIHTDLKPENILLVSAEYVKVPDY  238 (438)
Q Consensus       180 ~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlkp~NIli~~~~~~kl~df  238 (438)
                                 ...    .++..=+.+|.-.|+  .+.+|+|-.|+|||-+..|.+|+.|-
T Consensus       142 -----------~~~----N~i~agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP  187 (308)
T PF07387_consen  142 -----------NFS----NFITAGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDP  187 (308)
T ss_pred             -----------chh----HHHHHhHHHHHHhhccCCCeecCCCChhheeecCCCCEEecCh
Confidence                       111    111111456778884  46999999999999988776555554

The function of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	438
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		4e-89
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		6e-84
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		6e-84
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		7e-84
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		2e-82
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		3e-81
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		7e-66
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		5e-52
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		8e-52
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		4e-51
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		1e-48
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		1e-48
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		6e-48
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		2e-41
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		3e-41
2x7g_A	389	Structure Of Human Serine-Arginine-Rich Protein-Spe		6e-40
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		8e-34
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		8e-34
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		6e-28
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		6e-28
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		9e-28
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-27
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-27
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-27
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-27
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		4e-27
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		4e-27
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		5e-27
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		5e-27
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		5e-27
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		5e-27
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		5e-27
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		6e-27
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		6e-27
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		6e-27
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		6e-27
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		6e-27
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		6e-27
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		6e-27
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		6e-27
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		6e-27
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		6e-27
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		6e-27
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		6e-27
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		6e-27
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		7e-27
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		7e-27
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		7e-27
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		7e-27
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-26
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-26
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-26
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		7e-26
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		1e-25
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		1e-24
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		9e-24
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		2e-23
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		3e-23
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		4e-23
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-23
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		4e-23
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		4e-23
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-23
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		4e-23
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		4e-23
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		4e-23
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		4e-23
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		4e-23
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		4e-23
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		4e-23
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		4e-23
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		4e-23
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		5e-23
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		5e-23
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		5e-23
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		5e-23
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		7e-23
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		8e-23
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		9e-23
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		9e-23
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-22
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		1e-22
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-22
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		1e-22
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		2e-22
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		3e-22
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-22
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		5e-22
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		9e-22
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-21
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		2e-21
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		2e-21
4exu_A	371	Mapk13, Inactive Form Length = 371		3e-21
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		3e-21
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		3e-21
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		3e-21
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		4e-21
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		4e-21
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		4e-21
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		5e-21
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		6e-21
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		7e-21
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		7e-21
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		7e-21
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		7e-21
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		7e-21
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		7e-21
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		7e-21
2oza_B	366	Structure Of P38alpha Complex Length = 366		8e-21
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		9e-21
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		1e-20
3hec_A	348	P38 In Complex With Imatinib Length = 348		1e-20
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		1e-20
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		1e-20
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		1e-20
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		1e-20
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		1e-20
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		1e-20
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		1e-20
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		1e-20
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		1e-20
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		1e-20
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		1e-20
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		1e-20
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		1e-20
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		1e-20
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		1e-20
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		1e-20
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		1e-20
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		1e-20
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		1e-20
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		1e-20
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		1e-20
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		1e-20
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		1e-20
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		1e-20
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		1e-20
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		1e-20
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		1e-20
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		1e-20
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		1e-20
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		1e-20
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		1e-20
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		1e-20
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		1e-20
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		2e-20
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-20
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-20
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		2e-20
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-20
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		2e-20
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		3e-20
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-20
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		4e-20
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		4e-20
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		4e-20
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		5e-20
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		6e-20
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		1e-19
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		1e-19
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		2e-19
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		2e-19
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		2e-19
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-19
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-19
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		2e-19
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		2e-19
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		2e-19
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		2e-19
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		2e-19
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		2e-19
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		3e-19
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		3e-19
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		3e-19
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		3e-19
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		3e-19
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		3e-19
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		3e-19
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		3e-19
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		4e-19
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		4e-19
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		4e-19
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		4e-19
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-19
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		5e-19
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		5e-19
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		6e-19
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		7e-19
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		1e-18
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		1e-18
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		3e-18
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		4e-18
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		5e-18
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		6e-18
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		9e-18
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-17
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		1e-17
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		2e-17
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		2e-17
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		2e-17
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-17
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		3e-17
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		3e-17
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		3e-17
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		3e-17
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		4e-17
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		4e-17
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		4e-17
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		4e-17
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		5e-17
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		5e-17
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		6e-17
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		7e-17
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		7e-17
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		7e-17
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		7e-17
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		7e-17
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		9e-17
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		1e-16
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		1e-16
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		1e-16
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		1e-16
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		1e-16
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		1e-16
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		1e-16
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		1e-16
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		1e-16
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		1e-16
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		1e-16
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		1e-16
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		1e-16
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		1e-16
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		2e-16
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-16
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		2e-16
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		2e-16
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		2e-16
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		2e-16
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		2e-16
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		2e-16
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		2e-16
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		2e-16
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		2e-16
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-16
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		2e-16
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		2e-16
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		2e-16
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		2e-16
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		2e-16
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		2e-16
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		2e-16
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		2e-16
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		3e-16
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		5e-16
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		6e-16
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		7e-16
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		8e-16
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		8e-16
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		8e-16
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		8e-16
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		1e-15
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		1e-15
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		1e-15
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		1e-15
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		1e-15
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		1e-15
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		1e-15
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		1e-15
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		1e-15
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		2e-15
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		2e-15
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		2e-15
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		2e-15
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		2e-15
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		5e-15
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		5e-15
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		8e-15
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		1e-14
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		1e-14
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		2e-14
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-14
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		5e-14
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		5e-14
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		9e-14
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		1e-13
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		2e-13
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		2e-13
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		2e-13
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		2e-13
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-13
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-13
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		3e-13
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		3e-13
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		3e-13
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		5e-13
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		6e-13
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		7e-13
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		7e-13
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		7e-13
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		8e-13
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		8e-13
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		8e-13
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		8e-13
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		9e-13
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		9e-13
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		1e-12
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		1e-12
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		1e-12
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		1e-12
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		1e-12
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-12
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		1e-12
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		1e-12
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		1e-12
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		1e-12
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		1e-12
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		2e-12
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-12
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		2e-12
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		2e-12
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		2e-12
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-12
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		2e-12
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-12
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		2e-12
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		2e-12
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-12
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-12
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-12
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		2e-12
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		3e-12
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		3e-12
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		3e-12
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		3e-12
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		3e-12
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		3e-12
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		3e-12
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		3e-12
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		3e-12
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		3e-12
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		3e-12
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-12
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		3e-12
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		3e-12
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		4e-12
2oza_A	356	Structure Of P38alpha Complex Length = 356		4e-12
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		4e-12
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		4e-12
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		4e-12
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		4e-12
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		4e-12
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		4e-12
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		4e-12
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		4e-12
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		4e-12
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		5e-12
4fie_A	423	Full-Length Human Pak4 Length = 423		5e-12
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		6e-12
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		6e-12
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		6e-12
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		6e-12
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		6e-12
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		6e-12
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		6e-12
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		7e-12
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		7e-12
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		7e-12
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		7e-12
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		8e-12
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		9e-12
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		9e-12
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		1e-11
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		1e-11
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-11
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-11
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		1e-11
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		1e-11
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-11
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-11
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		1e-11
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		1e-11
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-11
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		1e-11
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-11
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		1e-11
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		1e-11
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		1e-11
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		1e-11
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		2e-11
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		2e-11
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		2e-11
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		2e-11
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		2e-11
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		2e-11
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		2e-11
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-11
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-11
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-11
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		2e-11
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-11
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		2e-11
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		2e-11
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		2e-11
4ae6_A	343	Structure And Function Of The Human Sperm-specific		2e-11
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		2e-11
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		2e-11
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		2e-11
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		2e-11
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		2e-11
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		3e-11
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		3e-11
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		3e-11
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-11
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		3e-11
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		4e-11
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		4e-11
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		4e-11
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-11
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		4e-11
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		4e-11
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		4e-11
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		4e-11
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		5e-11
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		5e-11
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		5e-11
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		5e-11
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		5e-11
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		5e-11
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		6e-11
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		6e-11
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		6e-11
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		6e-11
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		7e-11
4ae9_A	343	Structure And Function Of The Human Sperm-specific		7e-11
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		7e-11
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		7e-11
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		7e-11
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		8e-11
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		8e-11
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		8e-11
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		8e-11
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		9e-11
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		1e-10
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		1e-10
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-10
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		1e-10
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-10
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		1e-10
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-10
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-10
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		1e-10
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		1e-10
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		1e-10
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-10
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-10
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		2e-10
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-10
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		2e-10
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-10
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		2e-10
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		2e-10
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		2e-10
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-10
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		2e-10
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-10
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		3e-10
2pl0_A	289	Lck Bound To Imatinib Length = 289		3e-10
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		4e-10
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		4e-10
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		4e-10
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		4e-10
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		5e-10
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		6e-10
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		6e-10
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		6e-10
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		7e-10
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		8e-10
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		8e-10
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		8e-10
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		9e-10
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		1e-09
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		1e-09
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		1e-09
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		1e-09
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		1e-09
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-09
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		1e-09
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		1e-09
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		1e-09
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		1e-09
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		1e-09
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		1e-09
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-09
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-09
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		2e-09
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		2e-09
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		2e-09
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		2e-09
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		2e-09
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-09
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-09
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-09
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		2e-09
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-09
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		3e-09
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		3e-09
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		3e-09
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		3e-09
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		3e-09
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		3e-09
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		3e-09
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		3e-09
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		3e-09
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		3e-09
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		3e-09
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		3e-09
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		3e-09
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		3e-09
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		3e-09
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		4e-09
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		4e-09
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		4e-09
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		4e-09
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		4e-09
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		5e-09
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		5e-09
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		5e-09
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		6e-09
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		7e-09
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		7e-09
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		7e-09
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		8e-09
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		8e-09
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		8e-09
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		9e-09
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		9e-09
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		9e-09
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		1e-08
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		1e-08
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		1e-08
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		1e-08
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		1e-08
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		1e-08
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		1e-08
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-08
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-08
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		1e-08
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-08
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-08
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		1e-08
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-08
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		1e-08
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		1e-08
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-08
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-08
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		1e-08
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		1e-08
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		1e-08
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-08
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		2e-08
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-08
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		2e-08
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-08
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-08
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		2e-08
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-08
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		2e-08
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		2e-08
3soa_A	444	Full-Length Human Camkii Length = 444		2e-08
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		2e-08
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		2e-08
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		2e-08
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		2e-08
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		2e-08
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		2e-08
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		2e-08
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		2e-08
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-08
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		2e-08
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		3e-08
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		3e-08
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		3e-08
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		3e-08
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		3e-08
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		3e-08
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		3e-08
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		3e-08
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		3e-08
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		3e-08
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		3e-08
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-08
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		3e-08
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		4e-08
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		4e-08
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		4e-08
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		4e-08
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		5e-08
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		5e-08
1ckj_A	317	Casein Kinase I Delta Truncation Mutant Containing		5e-08
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		5e-08
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		5e-08
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		5e-08
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		6e-08
3uys_A	296	Crystal Structure Of Apo Human Ck1d Length = 296		6e-08
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		6e-08
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		6e-08
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		6e-08
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		7e-08
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		7e-08
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		8e-08
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		8e-08
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		8e-08
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		8e-08
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		8e-08
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		8e-08
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		9e-08
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		9e-08
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		9e-08
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		9e-08
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		1e-07
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-07
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		1e-07
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		1e-07
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		1e-07
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		1e-07
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		1e-07
3kk9_A	282	Camkii Substrate Complex B Length = 282		1e-07
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		1e-07
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-07
3kk8_A	284	Camkii Substrate Complex A Length = 284		2e-07
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		2e-07
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-07
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		2e-07
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		2e-07
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		2e-07
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		2e-07
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		2e-07
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-07
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		2e-07
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		2e-07
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		2e-07
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		2e-07
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		2e-07
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		2e-07
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		3e-07
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		3e-07
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		3e-07
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		3e-07
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-07
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		3e-07
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-07
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-07
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		3e-07
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-07
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		3e-07
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		3e-07
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		3e-07
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		3e-07
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		3e-07
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		3e-07
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		3e-07
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		3e-07
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		3e-07
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		3e-07
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		3e-07
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		3e-07
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		3e-07
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		4e-07
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		4e-07
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		4e-07
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		4e-07
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		4e-07
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		4e-07
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		4e-07
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		4e-07
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		4e-07
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		4e-07
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		4e-07
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		4e-07
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		5e-07
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		5e-07
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		5e-07
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		5e-07
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		5e-07
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		5e-07
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		5e-07
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		5e-07
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		5e-07
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		5e-07
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-07
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		7e-07
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		7e-07
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		7e-07
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		7e-07
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		7e-07
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		8e-07
4hni_A	296	Crystal Structure Of Ck1e In Complex With Pf4800567		8e-07
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		8e-07
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		9e-07
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		9e-07
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		9e-07
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-06
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		1e-06
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		1e-06
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		1e-06
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-06
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		1e-06
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		1e-06
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		1e-06
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		1e-06
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		1e-06
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-06
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-06
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		1e-06
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		1e-06
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		1e-06
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-06
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		1e-06
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-06
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		1e-06
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		1e-06
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		1e-06
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		1e-06
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		1e-06
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		2e-06
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-06
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-06
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		2e-06
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-06
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		2e-06
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		2e-06
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		2e-06
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		2e-06
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		2e-06
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		2e-06
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-06
2v62_A	345	Structure Of Vaccinia-Related Kinase 2 Length = 345		2e-06
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		2e-06
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		2e-06
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		2e-06
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		2e-06
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		2e-06
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		2e-06
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		2e-06
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		2e-06
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		2e-06
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		2e-06
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		2e-06
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		2e-06
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		2e-06
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-06
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		3e-06
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		3e-06
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		3e-06
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		3e-06
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		3e-06
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		3e-06
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		3e-06
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		3e-06
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		3e-06
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		3e-06
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		3e-06
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		4e-06
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		4e-06
2csn_A	297	Binary Complex Of Casein Kinase-1 With Cki7 Length		5e-06
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		5e-06
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		5e-06
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		5e-06
1eh4_A	298	Binary Complex Of Casein Kinase-1 From S. Pombe Wit		5e-06
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		5e-06
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		5e-06
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		5e-06
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		5e-06
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		5e-06
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		5e-06
4h58_A	275	Braf In Complex With Compound 3 Length = 275		5e-06
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		5e-06
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		6e-06
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		6e-06
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		6e-06
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		6e-06
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		7e-06
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		7e-06
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		8e-06
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		8e-06
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		8e-06
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		9e-06
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		9e-06
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		9e-06
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		1e-05
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		1e-05
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-05
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		1e-05
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-05
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-05
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-05
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		1e-05
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		2e-05
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		2e-05
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		2e-05
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		2e-05
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		2e-05
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-05
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		2e-05
2c47_A	313	Structure Of Casein Kinase 1 Gamma 2 Length = 313		2e-05
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		2e-05
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		2e-05
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		2e-05
4fl2_A	636	Structural And Biophysical Characterization Of The		2e-05
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-05
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		2e-05
4fl3_A	635	Structural And Biophysical Characterization Of The		2e-05
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		2e-05
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		2e-05
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		2e-05
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-05
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-05
2izr_A	330	Structure Of Casein Kinase Gamma 3 In Complex With		2e-05
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		3e-05
2cmw_A	310	Structure Of Human Casein Kinase 1 Gamma-1 In Compl		3e-05
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		3e-05
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		3e-05
2chl_A	351	Structure Of Casein Kinase 1 Gamma 3 Length = 351		3e-05
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		3e-05
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		3e-05
4hgl_A	330	Crystal Structure Of Ck1g3 With Compound 1 Length =		3e-05
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		3e-05
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		3e-05
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		3e-05
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		4e-05
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-05
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		4e-05
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		4e-05
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		4e-05
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		4e-05
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		5e-05
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		5e-05
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		5e-05
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		5e-05
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		5e-05
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		5e-05
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		6e-05
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		6e-05
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		6e-05
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		6e-05
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		6e-05
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-05
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		6e-05
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		6e-05
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		7e-05
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		7e-05
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		7e-05
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		7e-05
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		7e-05
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		7e-05
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		7e-05
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		7e-05
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		8e-05
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		8e-05
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		8e-05
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		8e-05
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		8e-05
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		8e-05
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		9e-05
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		9e-05
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		9e-05
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		1e-04
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		1e-04
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-04
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-04
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-04
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-04
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-04
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		2e-04
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-04
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		2e-04
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		2e-04
1x8b_A	289	Structure Of Human Wee1a Kinase: Kinase Domain Comp		2e-04
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-04
3bi6_A	287	Wee1 Kinase Complex With Inhibitor Pd352396 Length		2e-04
2in6_A	287	Wee1 Kinase Complex With Inhibitor Pd311839 Length		2e-04
2pzi_A	681	Crystal Structure Of Protein Kinase Pkng From Mycob		2e-04
2z2w_A	285	Humand Wee1 Kinase Complexed With Inhibitor Pf03357		2e-04
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		2e-04
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		2e-04
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		2e-04
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		3e-04
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-04
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		3e-04
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		3e-04
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		3e-04
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-04
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-04
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		3e-04
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		4e-04
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		4e-04
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		4e-04
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-04
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		6e-04
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		6e-04
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		6e-04
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		6e-04
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		6e-04
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		6e-04
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		6e-04
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		7e-04
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-04
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		7e-04
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		8e-04
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		8e-04
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		8e-04
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		9e-04
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		9e-04

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score =  325 bits (832), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 167/351 (47%), Positives = 239/351 (68%), Gaps = 16/351 (4%)
Query: 76  DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREA 134
           DD +GH ++ +G+ L  R +I+S +GEGTFG+VV+C D+ +    VA+KI++++ KY+EA
Sbjct: 17  DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 76
Query: 135 AMIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A +EI+VL+++   D      CVQ+ +WFDY  H+CI FE LG S +DFL+ N+Y  +PI
Sbjct: 77  ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 136
Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
             VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y    +   L +   + S    
Sbjct: 137 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYN---LEKKRDERSV--- 190
Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
             KS+A++++DFGS TF+H+ HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E   
Sbjct: 191 --KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 248
Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
           G  LFQTH+N EHLAMMER+LGP+P  M+ +   R +KYF RG RLDW +  ++   +R 
Sbjct: 249 GFTLFQTHDNREHLAMMERILGPIPSRMIRKT--RKQKYFYRG-RLDWDENTSAGRYVRE 305
Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             K LR   L  +  +H    L DL++ +L Y+PA+RL   EAL+HPFF R
Sbjct: 306 NCKPLR-RYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPFFAR 353

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score =  308 bits (788), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 156/350 (44%), Positives = 235/350 (67%), Gaps = 16/350 (4%)
Query: 76  DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
           DDK+GH V  IG+ L  R +I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREA
Sbjct: 35  DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 94
Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A +EI+VL+++   D      CV + +WF++  H+CI FE LG + ++FL++N+++ +P+
Sbjct: 95  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 154
Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
             VR +  QL  ++ F+HE +L HTDLKPENIL V++E+  + +     +S ++ S    
Sbjct: 155 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEH---KSCEEKSV--- 208
Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
             K+++I++ DFGS TF+H+ H+ +V+TRHYR PEVIL LGW  PCD+WS+GCIL E   
Sbjct: 209 --KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 266
Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
           G  LFQTHEN EHL MME++LGP+P HM+ R   R +KYF +G  L W + ++    ++ 
Sbjct: 267 GFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKE 323
Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
             K L+   ++   ++H    L DL++ +L +DPA+R+   EAL HPFF 
Sbjct: 324 NCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFA 370

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score =  307 bits (787), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 156/350 (44%), Positives = 235/350 (67%), Gaps = 16/350 (4%)
Query: 76  DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
           DDK+GH V  IG+ L  R +I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREA
Sbjct: 12  DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 71
Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A +EI+VL+++   D      CV + +WF++  H+CI FE LG + ++FL++N+++ +P+
Sbjct: 72  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 131
Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
             VR +  QL  ++ F+HE +L HTDLKPENIL V++E+  + +     +S ++ S    
Sbjct: 132 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNE---HKSCEEKSV--- 185
Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
             K+++I++ DFGS TF+H+ H+ +V+TRHYR PEVIL LGW  PCD+WS+GCIL E   
Sbjct: 186 --KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 243
Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
           G  LFQTHEN EHL MME++LGP+P HM+ R   R +KYF +G  L W + ++    ++ 
Sbjct: 244 GFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKE 300
Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
             K L+   ++   ++H    L DL++ +L +DPA+R+   EAL HPFF 
Sbjct: 301 NCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFA 347

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score =  307 bits (787), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 156/350 (44%), Positives = 235/350 (67%), Gaps = 16/350 (4%)
Query: 76  DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
           DDK+GH V  IG+ L  R +I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREA
Sbjct: 3   DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 62
Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A +EI+VL+++   D      CV + +WF++  H+CI FE LG + ++FL++N+++ +P+
Sbjct: 63  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 122
Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
             VR +  QL  ++ F+HE +L HTDLKPENIL V++E+  + +     +S ++ S    
Sbjct: 123 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNE---HKSCEEKSV--- 176
Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
             K+++I++ DFGS TF+H+ H+ +V+TRHYR PEVIL LGW  PCD+WS+GCIL E   
Sbjct: 177 --KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234
Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
           G  LFQTHEN EHL MME++LGP+P HM+ R   R +KYF +G  L W + ++    ++ 
Sbjct: 235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRT--RKQKYFYKGG-LVWDENSSDGRYVKE 291
Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
             K L+   ++   ++H    L DL++ +L +DPA+R+   EAL HPFF 
Sbjct: 292 NCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFA 338

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score =  303 bits (775), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 160/344 (46%), Positives = 227/344 (65%), Gaps = 16/344 (4%)
Query: 81  HYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREAAMIEI 139
           H +   G+ L+ R +I+  +GEG FG+VVEC D++     VA+KIV+++++Y EAA  EI
Sbjct: 3   HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 140 DVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE 198
            VL+ L   D   T RCVQ+  WF++  HICIVFE LG S YDF+++N +  F +D +R+
Sbjct: 63  QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
           +  Q+ +SV F+H  +L HTDLKPENIL V ++Y +  + K      +D     N     
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKI----KRDERTLIN----P 174
Query: 259 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
            IK++DFGS T++ + HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +F
Sbjct: 175 DIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
            TH++ EHLAMMER+LGPLP HM+ +  +R  KYF    RLDW + +++   +    K L
Sbjct: 235 PTHDSKEHLAMMERILGPLPKHMIQKTRKR--KYFHHD-RLDWDEHSSAGRYVSRACKPL 291
Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           +   ++ Q V+H    L DL+Q +L YDPA+R+  REAL+HPFF
Sbjct: 292 K-EFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score =  298 bits (764), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 158/344 (45%), Positives = 225/344 (65%), Gaps = 16/344 (4%)
Query: 81  HYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREAAMIEI 139
           H +   G+ L+ R +I+  +GEG FG+VVEC D++     VA+KIV+++++Y EAA  EI
Sbjct: 3   HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 140 DVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE 198
            VL+ L   D   T RCVQ+  WF++  HICIVFE LG S YDF+++N +  F +D +R+
Sbjct: 63  QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
           +  Q+ +SV F+H  +L HTDLKPENIL V ++Y +  + K      +D     N     
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKI----KRDERTLIN----P 174
Query: 259 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
            IK++DFGS T++ + HS +V  RHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +F
Sbjct: 175 DIKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
            TH++ EHLAMMER+LGPLP HM+ +  +R  KYF    RLDW + +++   +    K L
Sbjct: 235 PTHDSKEHLAMMERILGPLPKHMIQKTRKR--KYFHHD-RLDWDEHSSAGRYVSRACKPL 291
Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           +   ++ Q V+H    L DL+Q +L YDPA+R+  REAL+HPFF
Sbjct: 292 K-EFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score =  248 bits (632), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 136/353 (38%), Positives = 209/353 (59%), Gaps = 12/353 (3%)
Query: 73  WRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR 132
           ++ DD+  H+ +  G  L     ++ KMG+GTFG+V+ C   + K+  A+K+VR+I KY 
Sbjct: 16  FQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT 75
Query: 133 EAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFP 192
            +A IE D+L+++   DI     V+    F Y +H+C++FE LGPSLY+ + +N+Y  F 
Sbjct: 76  RSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFH 135
Query: 193 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
           I+ ++    ++L+++ ++ ++ L HTDLKPENILL    + K        R   DG   +
Sbjct: 136 IEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSL---ITVRRVTDGKKIQ 192
Query: 253 NL-PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
               KS+ IKLIDFG  TF+   H  +++TR YRAPEVIL LGW+   D+WS GC+L EL
Sbjct: 193 IYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252
Query: 312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADR-RAEKYFRRGA-RLDWPDGATSRD 369
            +G  LF+THE++EHLAMME ++ P+P +M+  A +    KY  +   +L WP+ A+S +
Sbjct: 253 YTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSIN 312
Query: 370 SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           S++ V K L L  +I   +        D L  +L+ DP  R    E L+H F 
Sbjct: 313 SIKHVKKCLPLYKIIKHEL------FCDFLYSILQIDPTLRPSPAELLKHKFL 359

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score =  201 bits (512), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/373 (33%), Positives = 195/373 (52%), Gaps = 41/373 (10%)
Query: 76  DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD  G YV    +++  R ++L  +G+G+FGQVV+ +D++  + VA+K+VR+  ++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 136 MIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
             EI +L+ L + D   T   + +   F +RNHIC+ FE L  +LY+ ++KN ++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
           LVR+    +L+ +  +H+ R+IH DLKPENILL                           
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ------------------------ 236
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
              S IK+IDFGS+ +EHQ     + +R YRAPEVILG  +  P D+WS+GCIL EL +G
Sbjct: 237 -GRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEK------YFRRGARLDWPDGATSR 368
             L    +  + LA M  +LG +P   ++ A +RA+       Y R        DG+   
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 369 DSMRAVWKLLRLPNLIMQHVDHSAGD----LIDLLQGLLRYDPAERLKAREALRHPFFTR 424
           +  R+    LR P    +  +   G      +D L+  L +DPA R+   +ALRHP+  R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
Query: 425 DVRRPTLLVATGE 437
            + +P     TGE
Sbjct: 415 RLPKP----PTGE 423

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score =  201 bits (510), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/373 (33%), Positives = 194/373 (52%), Gaps = 41/373 (10%)
Query: 76  DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD  G YV    +++  R ++L  +G+G FGQVV+ +D++  + VA+K+VR+  ++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 136 MIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
             EI +L+ L + D   T   + +   F +RNHIC+ FE L  +LY+ ++KN ++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
           LVR+    +L+ +  +H+ R+IH DLKPENILL                           
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ------------------------ 236
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
              S IK+IDFGS+ +EHQ     + +R YRAPEVILG  +  P D+WS+GCIL EL +G
Sbjct: 237 -GRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEK------YFRRGARLDWPDGATSR 368
             L    +  + LA M  +LG +P   ++ A +RA+       Y R        DG+   
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 369 DSMRAVWKLLRLPNLIMQHVDHSAGD----LIDLLQGLLRYDPAERLKAREALRHPFFTR 424
           +  R+    LR P    +  +   G      +D L+  L +DPA R+   +ALRHP+  R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
Query: 425 DVRRPTLLVATGE 437
            + +P     TGE
Sbjct: 415 RLPKP----PTGE 423

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score =  199 bits (505), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/360 (33%), Positives = 189/360 (52%), Gaps = 37/360 (10%)
Query: 76  DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD  G YV    +++  R ++L  +G+G+FGQVV+ +D++  + VA+K+VR+  ++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 136 MIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
             EI +L+ L + D   T   + +   F +RNHIC+ FE L  +LY+ ++KN ++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
           LVR+    +L+ +  +H+ R+IH DLKPENILL                           
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ------------------------ 236
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
              S IK+IDFGS+ +EHQ     + +R YRAPEVILG  +  P D+WS+GCIL EL +G
Sbjct: 237 -GRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEK------YFRRGARLDWPDGATSR 368
             L    +  + LA M  +LG +P   ++ A +RA+       Y R        DG+   
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 369 DSMRAVWKLLRLPNLIMQHVDHSAGD----LIDLLQGLLRYDPAERLKAREALRHPFFTR 424
           +  R+    LR P    +  +   G      +D L+  L +DPA R+   +ALRHP+  R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score =  190 bits (483), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 190/367 (51%), Gaps = 54/367 (14%)
Query: 87  GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
           GE    R +I S +G+G+FGQVV+ +D  ++E VAIKI+++   +   A IE+ +L+ + 
Sbjct: 30  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 89
Query: 147 RHDIG-GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +HD       V ++  F +RNH+C+VFE L  +LYD LR  ++R   ++L R+  +Q+  
Sbjct: 90  KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 149
Query: 206 SVAFMH--ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
           ++ F+   EL +IH DLKPENILL +                         PK SAIK++
Sbjct: 150 ALLFLATPELSIIHCDLKPENILLCN-------------------------PKRSAIKIV 184
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
           DFGS+    Q     + +R YR+PEV+LG+ ++   D+WS+GCILVE+ +GE LF     
Sbjct: 185 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 244
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
           ++ +  +  VLG  P H++ +A  +A K+F +      PDG  +    +   +  + P  
Sbjct: 245 VDQMNKIVEVLGIPPAHILDQAP-KARKFFEK-----LPDGTWNLKKTKDGKREYKPPGT 298
Query: 384 IMQH-----------------VDHSAGDLI---DLLQGLLRYDPAERLKAREALRHPFFT 423
              H                   H+  D +   DL+  +L YDP  R++   AL+H FF 
Sbjct: 299 RKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 358
Query: 424 RDVRRPT 430
           +     T
Sbjct: 359 KTADEGT 365

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score =  190 bits (482), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 189/361 (52%), Gaps = 54/361 (14%)
Query: 87  GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
           GE    R +I S +G+G+FGQVV+ +D  ++E VAIKI+++   +   A IE+ +L+ + 
Sbjct: 49  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 147 RHDIG-GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +HD       V ++  F +RNH+C+VFE L  +LYD LR  ++R   ++L R+  +Q+  
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 206 SVAFMH--ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
           ++ F+   EL +IH DLKPENILL +                         PK SAIK++
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCN-------------------------PKRSAIKIV 203
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
           DFGS+    Q     + +R YR+PEV+LG+ ++   D+WS+GCILVE+ +GE LF     
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
           ++ +  +  VLG  P H++ +A  +A K+F +      PDG  +    +   +  + P  
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAP-KARKFFEK-----LPDGTWNLKKTKDGKREYKPPGT 317
Query: 384 IMQH-----------------VDHSAGDLI---DLLQGLLRYDPAERLKAREALRHPFFT 423
              H                   H+  D +   DL+  +L YDP  R++   AL+H FF 
Sbjct: 318 RKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377
Query: 424 R 424
           +
Sbjct: 378 K 378

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score =  188 bits (477), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 191/361 (52%), Gaps = 54/361 (14%)
Query: 87  GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
           GE    R +I S +G+G+FGQVV+ +D  ++E VAIKI+++   +   A IE+ +L+ + 
Sbjct: 49  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 147 RHDIG-GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +HD       V ++  F +RNH+C+VFE L  +LYD LR  ++R   ++L R+  +Q+  
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 206 SVAFMH--ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
           ++ F+   EL +IH DLKPENILL +                         PK  AIK++
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCN-------------------------PKRXAIKIV 203
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
           DFGS+    Q     + +R YR+PEV+LG+ ++   D+WS+GCILVE+ +GE LF     
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA----TSRDSMRAVW--KL 377
           ++ +  +  VLG  P H++ +A  +A K+F +      PDG      ++D  R       
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAP-KARKFFEK-----LPDGTWNLKKTKDGKREYKPPGT 317
Query: 378 LRLPNLI-----------MQHVDHSAGDLI---DLLQGLLRYDPAERLKAREALRHPFFT 423
            +L N++                H+  D +   DL+  +L YDP  R++   AL+H FF 
Sbjct: 318 RKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377
Query: 424 R 424
           +
Sbjct: 378 K 378

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score =  166 bits (421), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 193/387 (49%), Gaps = 46/387 (11%)
Query: 75  PDD--KDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR 132
           P+D  K G+++  IG+    R  ++ K+G G F  V   +D + K+ VA+K+V+S   Y 
Sbjct: 2   PNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT 61
Query: 133 EAAMIEIDVLQRLARHDIGGTR---CVQIRNWFDYR----NHICIVFEKLGPSLYDFLRK 185
           E A+ EI +L+ +   D         VQ+ + F        HIC+VFE LG  L  ++ K
Sbjct: 62  ETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIK 121
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILL-VSAEYVK-----VPDY 238
           ++Y+  P+  V+++ +Q+L+ + ++H + R+IHTD+KPENILL V+ +Y++       ++
Sbjct: 122 SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEW 181
Query: 239 KFLSRSSKDGSYFKNLPKSSA----------------IKLIDFGSTTFEHQDHSYVVSTR 282
           +        GS     P ++                 +K+ D G+  + H+  +  + TR
Sbjct: 182 QRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTR 241
Query: 283 HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE------HLAMMERVLGP 336
            YR+ EV++G G+N P D+WS  C+  EL +G+ LF+ H   E      H+A++  +LG 
Sbjct: 242 QYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGK 301
Query: 337 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI 396
           +P  +++ A + ++++F +        G     +    W L  +     +     A    
Sbjct: 302 VPRKLIV-AGKYSKEFFTK-------KGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFT 353
Query: 397 DLLQGLLRYDPAERLKAREALRHPFFT 423
           D L  +L   P +R  A E LRHP+  
Sbjct: 354 DFLLPMLELIPEKRATAAECLRHPWLN 380

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score =  166 bits (420), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 193/387 (49%), Gaps = 46/387 (11%)
Query: 75  PDD--KDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR 132
           P+D  K G+++  IG+    R  ++ K+G G F  V   +D + K+ VA+K+V+S   Y 
Sbjct: 18  PNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT 77
Query: 133 EAAMIEIDVLQRLARHDIGGTR---CVQIRNWFDYR----NHICIVFEKLGPSLYDFLRK 185
           E A+ EI +L+ +   D         VQ+ + F        HIC+VFE LG  L  ++ K
Sbjct: 78  ETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIK 137
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILL-VSAEYVK-----VPDY 238
           ++Y+  P+  V+++ +Q+L+ + ++H + R+IHTD+KPENILL V+ +Y++       ++
Sbjct: 138 SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEW 197
Query: 239 KFLSRSSKDGSYFKNLPKSSA----------------IKLIDFGSTTFEHQDHSYVVSTR 282
           +        GS     P ++                 +K+ D G+  + H+  +  + TR
Sbjct: 198 QRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTR 257
Query: 283 HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE------HLAMMERVLGP 336
            YR+ EV++G G+N P D+WS  C+  EL +G+ LF+ H   E      H+A++  +LG 
Sbjct: 258 QYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGK 317
Query: 337 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI 396
           +P  +++ A + ++++F +        G     +    W L  +     +     A    
Sbjct: 318 VPRKLIV-AGKYSKEFFTK-------KGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFT 369
Query: 397 DLLQGLLRYDPAERLKAREALRHPFFT 423
           D L  +L   P +R  A E LRHP+  
Sbjct: 370 DFLLPMLELIPEKRATAAECLRHPWLN 396

>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389

Iteration: 1
 Score =  161 bits (408), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 186/385 (48%), Gaps = 52/385 (13%)
Query: 78  KDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI 137
           K G++   IG+    R  ++ K+G G F  V  C+D + K  VA+K+V+S   Y E A+ 
Sbjct: 17  KGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALD 76
Query: 138 EIDVLQRLARHDIGGTR---CVQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRS 190
           EI +L+ +   D         VQ+ + F        H+C+VFE LG  L  ++ K++Y+ 
Sbjct: 77  EIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQG 136
Query: 191 FPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILL-VSAEYVK-----VPDYKFLSR 243
            P+  V+ + RQ+L+ + ++H + ++IHTD+KPENIL+ V   YV+       +++    
Sbjct: 137 LPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGA 196
Query: 244 SSKDGSYFKNLPKSSA--------------IKLIDFGSTTFEHQDHSYVVSTRHYRAPEV 289
               GS     P +                +K+ D G+  + H+  +  + TR YR+ EV
Sbjct: 197 PPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEV 256
Query: 290 ILGLGWNYPCDLWSVGCILVELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVI 343
           ++G G++ P D+WS  C+  EL +G+ LF+ H       + +H+A +  +LG +P H  +
Sbjct: 257 LIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFAL 316
Query: 344 RADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL--LRLPNLIMQHVD---HSAGDLIDL 398
                 E + RRG              +R + KL    L +++++        A    D 
Sbjct: 317 SGKYSREFFNRRG-------------ELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDF 363
Query: 399 LQGLLRYDPAERLKAREALRHPFFT 423
           L  +L   P +R  A E LRHP+  
Sbjct: 364 LIPMLEMVPEKRASAGECLRHPWLN 388

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score =  141 bits (355), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 175/352 (49%), Gaps = 56/352 (15%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--- 149
           R  ++ K+G G F  V    D      VA+KIVR    Y EAA  EI +LQR+   D   
Sbjct: 20  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 150 ---IGGTRCVQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
              +G    +++ + F+++     H+ +VFE LG +L   ++K  +R  P+  V+++ +Q
Sbjct: 80  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 203 LLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           LL  + +MH    +IHTD+KPEN+L+   E V  P+               NL +   IK
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLM---EIVDSPE---------------NLIQ---IK 178
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
           + D G+  +  + ++  + TR YR+PEV+LG  W    D+WS  C++ EL +G+ LF+  
Sbjct: 179 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238
Query: 322 E------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
           E      + +H+A +  +LG LP ++ +R  +    +F             SR  +R + 
Sbjct: 239 EGHSYTKDDDHIAQIIELLGELPSYL-LRNGKYTRTFF------------NSRGLLRNIS 285
Query: 376 KLLRLP--NLIMQHVDHS---AGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           KL   P  +++ +    S   A ++ D L  +L+ DP +R  A   + HP+ 
Sbjct: 286 KLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score =  141 bits (355), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 175/352 (49%), Gaps = 56/352 (15%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--- 149
           R  ++ K+G G F  V    D      VA+KIVR    Y EAA  EI +LQR+   D   
Sbjct: 20  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 150 ---IGGTRCVQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
              +G    +++ + F+++     H+ +VFE LG +L   ++K  +R  P+  V+++ +Q
Sbjct: 80  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 203 LLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           LL  + +MH    +IHTD+KPEN+L+   E V  P+               NL +   IK
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLM---EIVDSPE---------------NLIQ---IK 178
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
           + D G+  +  + ++  + TR YR+PEV+LG  W    D+WS  C++ EL +G+ LF+  
Sbjct: 179 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238
Query: 322 E------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
           E      + +H+A +  +LG LP ++ +R  +    +F             SR  +R + 
Sbjct: 239 EGHSYTKDDDHIAQIIELLGELPSYL-LRNGKYTRTFF------------NSRGLLRNIS 285
Query: 376 KLLRLP--NLIMQHVDHS---AGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           KL   P  +++ +    S   A ++ D L  +L+ DP +R  A   + HP+ 
Sbjct: 286 KLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 158/343 (46%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 64
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L DF+  ++    P+ L++    QLL+ +AF H  
Sbjct: 65  --VKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKPEN+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 123 RVLHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 161
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 162 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 217 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 258
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 158/343 (46%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 11  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 67
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L DF+  ++    P+ L++    QLL+ +AF H  
Sbjct: 68  --VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 164
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 165 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 220 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 261
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 262 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score =  121 bits (303), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 158/343 (46%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 10  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 66
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L DF+  ++    P+ L++    QLL+ +AF H  
Sbjct: 67  --VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 163
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 164 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 219 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 260
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 261 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 296

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 11  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 67
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 68  --VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKPEN+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 126 RVLHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 164
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 165 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 220 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 261
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 262 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 9   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 65
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 66  --VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKPEN+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 162
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 163 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 218 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 259
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 260 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 10  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 66
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 67  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKPEN+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 125 RVLHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 163
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 164 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 219 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 260
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 261 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 296

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 9   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 65
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 66  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKPEN+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 162
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 163 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 218 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 259
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 260 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score =  119 bits (298), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 157/341 (46%), Gaps = 61/341 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 15  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 71
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 72  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG      +
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---R 165
Query: 274 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
            +++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 166 TYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 225
Query: 333 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 226 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 265
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 266 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 301

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 157/341 (46%), Gaps = 61/341 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 9   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 65
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 66  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG      +
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---R 159
Query: 274 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
            +++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 160 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 333 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 220 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 259
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 260 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 154/344 (44%), Gaps = 67/344 (19%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 15  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 71
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 72  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTF 270
           R++H DLKP+N+L+ +                             AIKL DFG   +   
Sbjct: 130 RVLHRDLKPQNLLINT---------------------------EGAIKLADFGLARAFGV 162
Query: 271 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
             + +++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  
Sbjct: 163 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 222
Query: 330 MERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
           + R LG  P  +V         Y   F + AR D+       D                 
Sbjct: 223 IFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE---------------- 265
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                  D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 266 -------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 301

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 11  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 67
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 68  --VKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 164
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 165 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 220 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 261
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 262 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 157/341 (46%), Gaps = 61/341 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 7   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 63
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 64  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG      +
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---R 157
Query: 274 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
            +++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 333 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 218 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 257
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 258 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 157/341 (46%), Gaps = 61/341 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 64
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 65  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG      +
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---R 158
Query: 274 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
            +++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 159 TYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 333 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 219 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 258
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 154/344 (44%), Gaps = 67/344 (19%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 12  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 68
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 69  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTF 270
           R++H DLKP+N+L+ +                             AIKL DFG   +   
Sbjct: 127 RVLHRDLKPQNLLINT---------------------------EGAIKLADFGLARAFGV 159
Query: 271 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
             + +++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  
Sbjct: 160 PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 219
Query: 330 MERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
           + R LG  P  +V         Y   F + AR D+       D                 
Sbjct: 220 IFRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE---------------- 262
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                  D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 263 -------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 298

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 157/341 (46%), Gaps = 61/341 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 64
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 65  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG      +
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---R 158
Query: 274 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
            +++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 159 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 333 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 219 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 258
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 11  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 67
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 68  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 164
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 165 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 220 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 261
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 262 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 10  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 66
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 67  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 163
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 164 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 219 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 260
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 261 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 296

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 157/341 (46%), Gaps = 61/341 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 64
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 65  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG      +
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---R 158
Query: 274 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
            +++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 159 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 333 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 219 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 258
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 157/341 (46%), Gaps = 61/341 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 7   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 63
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 64  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG      +
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---R 157
Query: 274 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
            +++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 333 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 218 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 257
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 258 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 12  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 68
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 69  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 165
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 166 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 220
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 221 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 262
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 263 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 298

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 7   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 63
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 64  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 160
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 161 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 216 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 257
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 258 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 11  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 67
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 68  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 164
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 165 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 220 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 261
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 262 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 9   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 65
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 66  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 162
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 163 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 218 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 259
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 260 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 11  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 67
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE +   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 68  --VKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 164
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 165 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 220 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 261
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 262 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 297

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 10  VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 66
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 67  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 163
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 164 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 219 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 260
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 261 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 296

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 64
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 65  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 161
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 162 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 217 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 258
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 64
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 65  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 161
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 162 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 217 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 258
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score =  118 bits (295), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 7   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 63
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 64  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 160
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 161 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 216 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 257
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 258 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score =  118 bits (295), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 9   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 65
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 66  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 162
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 163 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 218 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 259
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 260 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 295

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  118 bits (295), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 157/341 (46%), Gaps = 61/341 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 7   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 63
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE +   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 64  --VKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG      +
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---R 157
Query: 274 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
            +++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 333 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 218 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 257
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 258 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score =  118 bits (295), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 157/343 (45%), Gaps = 65/343 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 64
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 65  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 161
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 162 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 217 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 258
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                 D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 157/341 (46%), Gaps = 61/341 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 64
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ ++F H  
Sbjct: 65  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG      +
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---R 158
Query: 274 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
            +++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 159 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 333 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 219 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 258
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 156/341 (45%), Gaps = 61/341 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+  +R           A+ EI +L+ L   +I   
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI--- 64
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 65  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG      +
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---R 158
Query: 274 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
            +++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 159 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 333 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 219 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 258
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 259 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 294

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 156/341 (45%), Gaps = 61/341 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+  +R           A+ EI +L+ L   +I   
Sbjct: 7   VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI--- 63
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 64  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG      +
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPV---R 157
Query: 274 DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
            +++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  + R
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 333 VLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
            LG  P  +V         Y   F + AR D+       D                    
Sbjct: 218 TLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE------------------- 257
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 258 ----DGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score =  114 bits (286), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 152/335 (45%), Gaps = 64/335 (19%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 8   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 64
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H  
Sbjct: 65  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--TFE 271
           R++H DLKP+N+L+ +   +K+ D+  L+R+                    FG    T+ 
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG-LARA--------------------FGVPVRTYX 161
Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           H+     V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 162 HE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
Query: 331 ERVLGPLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            R LG  P  +V         Y   F + AR D+       D                  
Sbjct: 217 FRTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE----------------- 258
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                 D   LL  +L YDP +R+ A+ AL HPFF
Sbjct: 259 ------DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 159/331 (48%), Gaps = 55/331 (16%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHDIGGT 153
           + K+GEG++G V +C + +  ++VAIK  + S +    ++ A+ EI +L++L   ++   
Sbjct: 8   IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNL--- 64
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V +   F  +  + +VFE    ++   L +   R  P  LV+ +  Q L++V F H+ 
Sbjct: 65  --VNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKH 121
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH D+KPENIL+     +K+ D+ F    +    Y+ +                    
Sbjct: 122 NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD-------------------- 161
Query: 274 DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                V+TR YR+PE+++G   +  P D+W++GC+  EL SG  L+    +++ L ++ +
Sbjct: 162 ----EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRK 217
Query: 333 VLGPL-PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
            LG L P H  + +     +YF  G ++  P+     +        L+ PN+        
Sbjct: 218 TLGDLIPRHQQVFS---TNQYF-SGVKIPDPEDMEPLE--------LKFPNI-------- 257
Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           +   + LL+G L  DP ERL   + L HP+F
Sbjct: 258 SYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 159/340 (46%), Gaps = 54/340 (15%)
Query: 91  TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH 148
           + + K L K+G GT+  V +  +      VA+K V+  S       A+ EI +++ L   
Sbjct: 4   SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----NSYRSFPIDLVRELGRQLL 204
           +I     V++ +     N + +VFE +   L  ++      N+ R   ++LV+    QLL
Sbjct: 64  NI-----VRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
           + +AF HE +++H DLKP+N+L+     +K+ D+               L ++  I +  
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKRGQLKLGDF--------------GLARAFGIPVNT 164
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN 323
           F S           V T  YRAP+V++G   ++   D+WS GCIL E+ +G+ LF    +
Sbjct: 165 FSSE----------VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND 214
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
            E L ++  ++G  P+  +  +  +  KY     +         RD          L  +
Sbjct: 215 EEQLKLIFDIMG-TPNESLWPSVTKLPKYNPNIQQ------RPPRD----------LRQV 257
Query: 384 IMQHVDHSA-GDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           +  H      G+L+D L GLL+ +P  RL A++AL HP+F
Sbjct: 258 LQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score =  107 bits (268), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 38  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 93
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + +V   +G  LY  L+     +   D +    
Sbjct: 94  ILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSN---DHICYFL 150
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDL 183
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 184 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 244 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 292
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 293 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDL 167
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 276
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 277 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 74  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 130
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDL 163
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 164 KIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 224 NRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYL-----LSLPHKN------K 272
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 273 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 74  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 130
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDL 163
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 164 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 224 NRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYL-----LSLPHKN------K 272
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 273 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 20  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L      +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 76  ILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 132
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +S +
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TSDL 165
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 166 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 226 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYL-----LSLPHKN------K 274
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 275 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 153/339 (45%), Gaps = 61/339 (17%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR------SINKYREAAMIEIDVLQRLA 146
           R + L  +GEG F  V +  D    ++VAIK ++      + +     A+ EI +LQ L+
Sbjct: 11  RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             +I G     + + F ++++I +VF+ +   L   ++ NS    P   ++      L+ 
Sbjct: 71  HPNIIG-----LLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTP-SHIKAYMLMTLQG 124
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + ++H+  ++H DLKP N+LL     +K+ D+               L KS       FG
Sbjct: 125 LEYLHQHWILHRDLKPNNLLLDENGVLKLADF--------------GLAKS-------FG 163
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
           S    ++ + + V TR YRAPE++ G   +    D+W+VGCIL EL           +L+
Sbjct: 164 SP---NRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD 220
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
            L  +   LG                         WPD  +  D +         P + +
Sbjct: 221 QLTRIFETLG-------------------TPTEEQWPDMCSLPDYV----TFKSFPGIPL 257
Query: 386 QHVDHSAGD-LIDLLQGLLRYDPAERLKAREALRHPFFT 423
            H+  +AGD L+DL+QGL  ++P  R+ A +AL+  +F+
Sbjct: 258 HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 296

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 38  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 93
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 94  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 150
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 183
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 184 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 244 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 292
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 293 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 20  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 76  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 132
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 165
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 166 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 226 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 274
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 275 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 317

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 74  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 130
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 163
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 164 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 224 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 272
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 273 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 74  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 130
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDL 163
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 164 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 224 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 272
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 273 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 16  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 71
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 72  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 128
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 161
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 162 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 221
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 222 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 270
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 271 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 23  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 78
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 79  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 135
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 168
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 169 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 229 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 277
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 278 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 24  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 79
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 80  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 136
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 137 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 169
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 170 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 229
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 230 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 278
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 279 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 321

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 15  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 70
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 71  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 127
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 128 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 160
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 161 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 220
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 221 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 269
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 270 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 312

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 167
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 276
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 277 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 26  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 81
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 82  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 138
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 139 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 171
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 172 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 231
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 232 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 280
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 281 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 323

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 74  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 130
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 163
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 164 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 224 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 272
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 273 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TXDL 167
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 276
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 277 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 167
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 168 KICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 276
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 277 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 23  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 78
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 79  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 135
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 168
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 169 KICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 229 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 277
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 278 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 16  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 71
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 72  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 128
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 161
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 162 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 221
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 222 NRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYL-----LSLPHKN------K 270
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 271 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 153/345 (44%), Gaps = 68/345 (19%)
Query: 97  LSKMGEGTFGQVVECFD-NEKKELVAIKIVR--------SINKYREAAMIEIDVLQRLAR 147
           ++++GEG +G+V +  D       VA+K VR         ++  RE A++    L+    
Sbjct: 16  VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH--LETFEH 73
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            ++     V   +  D    + +VFE +   L  +L K      P + ++++  QLL  +
Sbjct: 74  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
            F+H  R++H DLKP+NIL+ S                           S  IKL DFG 
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKLADFGL 166
Query: 268 T---TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
               +F+    S VV T  YRAPEV+L   +  P DLWSVGCI  E+   + LF+   ++
Sbjct: 167 ARIYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLPNL 383
           + L  +  V+G LP                     DWP D A  R +  +  K  +    
Sbjct: 226 DQLGKILDVIG-LP------------------GEEDWPRDVALPRQAFHS--KSAQPIEK 264
Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
            +  +D       DLL   L ++PA+R+ A  AL HP+F +D+ R
Sbjct: 265 FVTDIDELGK---DLLLKCLTFNPAKRISAYSALSHPYF-QDLER 305

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score =  104 bits (260), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 167
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 276
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 277 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 153/345 (44%), Gaps = 68/345 (19%)
Query: 97  LSKMGEGTFGQVVECFD-NEKKELVAIKIVR--------SINKYREAAMIEIDVLQRLAR 147
           ++++GEG +G+V +  D       VA+K VR         ++  RE A++    L+    
Sbjct: 16  VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH--LETFEH 73
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            ++     V   +  D    + +VFE +   L  +L K      P + ++++  QLL  +
Sbjct: 74  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
            F+H  R++H DLKP+NIL+ S                           S  IKL DFG 
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKLADFGL 166
Query: 268 T---TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
               +F+    S VV T  YRAPEV+L   +  P DLWSVGCI  E+   + LF+   ++
Sbjct: 167 ARIYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLPNL 383
           + L  +  V+G LP                     DWP D A  R +  +  K  +    
Sbjct: 226 DQLGKILDVIG-LP------------------GEEDWPRDVALPRQAFHS--KSAQPIEK 264
Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
            +  +D       DLL   L ++PA+R+ A  AL HP+F +D+ R
Sbjct: 265 FVTDIDELGK---DLLLKCLTFNPAKRISAYSALSHPYF-QDLER 305

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 148/352 (42%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAI+ +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 167
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 228 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 276
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 277 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 149/339 (43%), Gaps = 67/339 (19%)
Query: 97  LSKMGEGTFGQVVECFD-NEKKELVAIKIVR--------SINKYREAAMIEIDVLQRLAR 147
           ++++GEG +G+V +  D       VA+K VR         ++  RE A++    L+    
Sbjct: 16  VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH--LETFEH 73
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            ++     V   +  D    + +VFE +   L  +L K      P + ++++  QLL  +
Sbjct: 74  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
            F+H  R++H DLKP+NIL+ S                           S  IKL DFG 
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKLADFGL 166
Query: 268 T---TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
               +F+    S VV T  YRAPEV+L   +  P DLWSVGCI  E+   + LF+   ++
Sbjct: 167 ARIYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLPNL 383
           + L  +  V+G LP                     DWP D A  R +  +  K  +    
Sbjct: 226 DQLGKILDVIG-LP------------------GEEDWPRDVALPRQAFHS--KSAQPIEK 264
Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
            +  +D       DLL   L ++PA+R+ A  AL HP+F
Sbjct: 265 FVTDIDELGK---DLLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 148/366 (40%), Gaps = 98/366 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR------------ 147
           +G G+FG V E FD E  +  A+K V    +Y+     E+D+++ L              
Sbjct: 15  LGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNR---ELDIMKVLDHVNIIKLVDYFYT 71
Query: 148 --------------HDIGGTRCVQIRNWF-------DYRNHICIVFEKLGPSLYDFLRK- 185
                         H+  G +   + N             ++ ++ E +  +L+  L+  
Sbjct: 72  TGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSF 131
Query: 186 -NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244
             S RS P++L+     QL  +V F+H L + H D+KP+N+L+ S               
Sbjct: 132 IRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS--------------- 176
Query: 245 SKDGSYFKNLPKSSAIKLIDFGSTT--FEHQDHSYVVSTRHYRAPEVILGLGWNYPC-DL 301
                      K + +KL DFGS       +     + +R YRAPE++LG     P  DL
Sbjct: 177 -----------KDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDL 225
Query: 302 WSVGCILVELCSGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLD 360
           WS+GC+  EL  G+ LF    +++ L  + +++G P    M+       E  F      D
Sbjct: 226 WSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKD 285
Query: 361 W----PDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREA 416
           W    P+G  S                            IDLL+ +LRY+P  R+   EA
Sbjct: 286 WRKILPEGTPSL--------------------------AIDLLEQILRYEPDLRINPYEA 319
Query: 417 LRHPFF 422
           + HPFF
Sbjct: 320 MAHPFF 325

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 147/352 (41%), Gaps = 64/352 (18%)
Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 20  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L      +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 76  ILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 132
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+L  + ++H   ++H DLKP N+LL +                           +  +
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TCDL 165
Query: 261 KLIDFGSTTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313
           K+ DFG       DH +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S
Sbjct: 166 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
Query: 314 GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
              +F     L+ L  +  +LG P    +    + +A  Y      L  P         +
Sbjct: 226 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL-----LSLPHKN------K 274
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             W      N +  + D  A   +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 275 VPW------NRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 144/346 (41%), Gaps = 60/346 (17%)
Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLA 146
           ++ PR   L  +GEG +G V   +D+ +K  VAIK +       Y +  + EI +L R  
Sbjct: 40  DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFR 99
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             ++ G R +   +  +    + IV + +   LY  L+     +   D +     Q+L  
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSN---DHICYFLYQILRG 156
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + ++H   ++H DLKP N+L+ +                           +  +K+ DFG
Sbjct: 157 LKYIHSANVLHRDLKPSNLLINT---------------------------TCDLKICDFG 189
Query: 267 STTFEHQDHSYV------VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ 319
                  +H +       V+TR YRAPE++L   G+    D+WSVGCIL E+ S   +F 
Sbjct: 190 LARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 249
Query: 320 THENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
               L+ L  +  +LG P    +    + +A  Y +           +     +  W  L
Sbjct: 250 GKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQ-----------SLPSKTKVAWAKL 298
Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
                       S    +DLL  +L ++P +R+   EAL HP+  +
Sbjct: 299 ---------FPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ 335

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 146/356 (41%), Gaps = 63/356 (17%)
Query: 86  IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI------EI 139
           +G   T R + ++++G G +G V +  D      VA+K VR  N       +      E+
Sbjct: 3   LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 140 DVLQRLARHDIGGTR-----CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
            +L+RL   +          C   R   D    + +VFE +   L  +L K      P +
Sbjct: 63  ALLRRLEAFEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 120
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
            +++L RQ L  + F+H   ++H DLKPENIL+ S   VK+ D+      ++  SY   L
Sbjct: 121 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL----ARIYSYQMAL 176
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                                + VV T  YRAPEV+L   +  P D+WSVGCI  E+   
Sbjct: 177 ---------------------TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 215
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRA 373
           + LF  +   + L  +  ++G  P                     DWP D +  R +   
Sbjct: 216 KPLFCGNSEADQLGKIFDLIGLPPED-------------------DWPRDVSLPRGAFPP 256
Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
                R P  +   V         LL  +L ++P +R+ A  AL+H +  +D   P
Sbjct: 257 -----RGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 307

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 153/353 (43%), Gaps = 76/353 (21%)
Query: 94  CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           CK++   G G+FG V +    E  E VAIK V    +++   +     + R+ +H     
Sbjct: 45  CKVI---GNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNREL----QIMRIVKH----P 92
Query: 154 RCVQIRNWFDYRN-------HICIVFEKLGPSLYDFLRKNSY--RSFPIDLVRELGRQLL 204
             V ++ +F Y N        + +V E +  ++Y   R  +   ++ P+ L++    QLL
Sbjct: 93  NVVDLKAFF-YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLL 151
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
            S+A++H + + H D+KP+N+LL                           P S  +KLID
Sbjct: 152 RSLAYIHSIGICHRDIKPQNLLLD--------------------------PPSGVLKLID 185
Query: 265 FGSTTF--EHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           FGS       + +   + +R+YRAPE+I G   +    D+WS GC++ EL  G+ LF   
Sbjct: 186 FGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGE 245
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
             ++ L  + +VLG  P    I+                      + + M   +  +R  
Sbjct: 246 SGIDQLVEIIKVLG-TPSREQIK--------------------TMNPNYMEHKFPQIRPH 284
Query: 382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF----TRDVRRPT 430
                    +  D IDL+  LL Y P+ RL A EAL HPFF    T + R P 
Sbjct: 285 PFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEARMPN 337

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 142/348 (40%), Gaps = 60/348 (17%)
Query: 91  TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMIEIDVLQRLAR 147
           T R + ++++G G +G V +  D      VA+K VR  N       + + E+ +L+RL  
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 148 HDIGGTR-----CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
            +          C   R   D    + +VFE +   L  +L K      P + +++L RQ
Sbjct: 63  FEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
            L  + F+H   ++H DLKPENIL+ S   VK+ D+      S   + F           
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP---------- 170
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
                          VV T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  + 
Sbjct: 171 ---------------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 215
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLP 381
             + L  +  ++G  P                     DWP D +  R +        R P
Sbjct: 216 EADQLGKIFDLIGLPPED-------------------DWPRDVSLPRGAFPP-----RGP 251
Query: 382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
             +   V         LL  +L ++P +R+ A  AL+H +  +D   P
Sbjct: 252 RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 165/347 (47%), Gaps = 39/347 (11%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI--EIDVLQRLARHD 149
           + +++ K+G+G +G V +  D    E+VA+K I  +     +A     EI +L  L+ H+
Sbjct: 10  KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 150 IGGTRCVQIRNWF--DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
                 V + N    D    + +VF+ +   L+  +R N         V     QL++ +
Sbjct: 70  ----NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYV---VYQLIKVI 122
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
            ++H   L+H D+KP NILL +  +VKV D+  LSRS      F N+ + +    +    
Sbjct: 123 KYLHSGGLLHRDMKPSNILLNAECHVKVADFG-LSRS------FVNIRRVTNNIPLSINE 175
Query: 268 TTFEHQDHSYV----VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHE 322
            T    D   +    V+TR YRAPE++LG   +    D+WS+GCIL E+  G+ +F    
Sbjct: 176 NTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235
Query: 323 NLEHLAMMERVLGPL--PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR----AVWK 376
            +  L   ER++G +  P +  + +    +  F +       +    R S +      WK
Sbjct: 236 TMNQL---ERIIGVIDFPSNEDVES---IQSPFAKTMIESLKEKVEIRQSNKRDIFTKWK 289
Query: 377 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
            L L   I    D +  + +DLL  LL+++P +R+ A +AL+HPF +
Sbjct: 290 NLLLK--INPKADCNE-EALDLLDKLLQFNPNKRISANDALKHPFVS 333

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  101 bits (251), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 145/348 (41%), Gaps = 60/348 (17%)
Query: 91  TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------SINKYREAAMIEIDVL 142
           T R + ++++G G +G V +  D      VA+K VR         I+  RE A++    L
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLR--RL 60
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +     ++     V   +  D    + +VFE +   L  +L K      P + +++L RQ
Sbjct: 61  EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
            L  + F+H   ++H DLKPENIL+ S   VK+ D+      ++  SY   L        
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL----ARIYSYQMAL-------- 168
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
                        + VV T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  + 
Sbjct: 169 -------------APVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 215
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLP 381
             + L  +  ++G  P                     DWP D +  R +        R P
Sbjct: 216 EADQLGKIFDLIGLPPED-------------------DWPRDVSLPRGAFPP-----RGP 251
Query: 382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
             +   V         LL  +L ++P +R+ A  AL+H +  +D   P
Sbjct: 252 RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 144/348 (41%), Gaps = 60/348 (17%)
Query: 91  TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------SINKYREAAMIEIDVL 142
           T R + ++++G G +G V +  D      VA+K VR         I+  RE A++    L
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLR--RL 60
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +     ++     V   +  D    + +VFE +   L  +L K      P + +++L RQ
Sbjct: 61  EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
            L  + F+H   ++H DLKPENIL+ S   VK+ D+      ++  SY   L        
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL----ARIYSYQMAL-------- 168
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
                          VV T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  + 
Sbjct: 169 -------------DPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 215
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP-DGATSRDSMRAVWKLLRLP 381
             + L  +  ++G  P                     DWP D +  R +        R P
Sbjct: 216 EADQLGKIFDLIGLPPED-------------------DWPRDVSLPRGAFPP-----RGP 251
Query: 382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
             +   V         LL  +L ++P +R+ A  AL+H +  +D   P
Sbjct: 252 RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 154/337 (45%), Gaps = 38/337 (11%)
Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA 146
           N++   ++ S +GEG +G V         E+VAIK +   +K  +    + EI +L+   
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             +I     +Q  + F+  N + I+ E +   L+   R  S +    D ++    Q L +
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           V  +H   +IH DLKP N+L+ S   +KV D+  L+R   + +   + P      +++F 
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFG-LARIIDESAADNSEPTGQQSGMVEF- 182
Query: 267 STTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
                       V+TR YRAPEV+L    ++   D+WS GCIL EL     +F   +   
Sbjct: 183 ------------VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
            L ++  ++G  PH                   L   +   +R+ ++++      P   M
Sbjct: 231 QLLLIFGIIG-TPH---------------SDNDLRCIESPRAREYIKSLPMYPAAPLEKM 274
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
               +  G  IDLLQ +L +DPA+R+ A+EAL HP+ 
Sbjct: 275 FPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++         D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKSQKLTD---DHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + + S +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDSELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 145/335 (43%), Gaps = 65/335 (19%)
Query: 98  SKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHDIGG-- 152
           + +G G +G V    D    E VAIK + R      + + A  E+ +L+ +   ++ G  
Sbjct: 48  THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 153 ---TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
              T    +RN++D        F  + P +   L+K     F  + ++ L  Q+L+ + +
Sbjct: 108 DVFTPASSLRNFYD--------FYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKY 159
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H   ++H DLKP N+                            + +   +K++DFG   
Sbjct: 160 IHSAGVVHRDLKPGNL---------------------------AVNEDCELKILDFGLAR 192
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
               + +  V TR YRAPEVIL  + +N   D+WSVGCI+ E+ +G+ LF+  + L+ L 
Sbjct: 193 HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 252
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL-IMQH 387
            + +V G      V + + +A K +                    +  L + P     Q 
Sbjct: 253 QILKVTGVPGTEFVQKLNDKAAKSY--------------------IQSLPQTPRKDFTQL 292
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
              ++    DLL+ +L  D  +RL A +AL HPFF
Sbjct: 293 FPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 83
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 84  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 139
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + + S +K+
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDSELKI 172
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 173 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 233 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 272
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 273 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 79
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 80  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 135
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + + S +K+
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDSELKI 168
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 169 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 229 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 268
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 269 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 148/344 (43%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   +D +    +A+K        I+ +   YRE  ++      +
Sbjct: 52  RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLL------K 105
Query: 145 LARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
             +H+  IG           +  N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 106 HMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 162
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+ +                            +   +K+
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSNLAV---------------------------NEDCELKI 195
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 196 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGT 255
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           +++  L  + R+ G  P  ++ R                      S ++   +  L ++P
Sbjct: 256 DHINQLQQIMRLTGTPPASVISR--------------------MPSHEARNYINSLPQMP 295
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
                 V   A  L +DLL+ +L  D  +R+ A EAL HP+F++
Sbjct: 296 KRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 152/340 (44%), Gaps = 44/340 (12%)
Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA 146
           N++   ++ S +GEG +G V         E+VAIK +   +K  +    + EI +L+   
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             +I     +Q  + F+  N + I+ E +   L+   R  S +    D ++    Q L +
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLI 263
           V  +H   +IH DLKP N+L+ S   +KV D+   + +  S+ D S              
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS-------------- 170
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
                T +    +  V+TR YRAPEV+L    ++   D+WS GCIL EL     +F   +
Sbjct: 171 ---EPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
               L ++  ++G  PH                   L   +   +R+ ++++      P 
Sbjct: 228 YRHQLLLIFGIIG-TPH---------------SDNDLRCIESPRAREYIKSLPMYPAAPL 271
Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             M    +  G  IDLLQ +L +DPA+R+ A+EAL HP+ 
Sbjct: 272 EKMFPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 152/340 (44%), Gaps = 44/340 (12%)
Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA 146
           N++   ++ S +GEG +G V         E+VAIK +   +K  +    + EI +L+   
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             +I     +Q  + F+  N + I+ E +   L+   R  S +    D ++    Q L +
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLI 263
           V  +H   +IH DLKP N+L+ S   +KV D+   + +  S+ D S              
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS-------------- 170
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
                T +    +  V+TR YRAPEV+L    ++   D+WS GCIL EL     +F   +
Sbjct: 171 ---EPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
               L ++  ++G  PH                   L   +   +R+ ++++      P 
Sbjct: 228 YRHQLLLIFGIIG-TPH---------------SDNDLRCIESPRAREYIKSLPMYPAAPL 271
Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             M    +  G  IDLLQ +L +DPA+R+ A+EAL HP+ 
Sbjct: 272 EKMFPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 145/335 (43%), Gaps = 65/335 (19%)
Query: 98  SKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHDIGG-- 152
           + +G G +G V    D    E VAIK + R      + + A  E+ +L+ +   ++ G  
Sbjct: 30  THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 153 ---TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
              T    +RN++D        F  + P +   L+K     F  + ++ L  Q+L+ + +
Sbjct: 90  DVFTPASSLRNFYD--------FYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKY 141
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H   ++H DLKP N+                            + +   +K++DFG   
Sbjct: 142 IHSAGVVHRDLKPGNL---------------------------AVNEDCELKILDFGLAR 174
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
               + +  V TR YRAPEVIL  + +N   D+WSVGCI+ E+ +G+ LF+  + L+ L 
Sbjct: 175 HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 234
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL-IMQH 387
            + +V G      V + + +A K +                    +  L + P     Q 
Sbjct: 235 QILKVTGVPGTEFVQKLNDKAAKSY--------------------IQSLPQTPRKDFTQL 274
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
              ++    DLL+ +L  D  +RL A +AL HPFF
Sbjct: 275 FPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 153/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++         D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKXQKLTD---DHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDXELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 42  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 96
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 97  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 152
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 185
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 186 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 246 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 285
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 286 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 98.6 bits (244), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 98.6 bits (244), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 73
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 74  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 129
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 162
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 163 LDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 223 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 262
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 263 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 97
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 98  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 153
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 186
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 187 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 247 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 286
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 287 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 153/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++         D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKXQKLTD---DHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 73
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 74  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 129
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 162
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 163 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 223 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 262
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 263 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 98.2 bits (243), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 83
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 84  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 139
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 172
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 173 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 233 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 272
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 273 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 28  RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 82
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 83  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 138
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDXELKI 171
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 172 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 232 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 271
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 272 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 153/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 73
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++         D V+ L  Q
Sbjct: 74  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCAKLTD---DHVQFLIYQ 129
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 162
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 163 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 223 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 262
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 263 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 73
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 74  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 129
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 162
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 163 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 223 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 262
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 263 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 97
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 98  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 153
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 186
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 187 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 247 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 286
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 287 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 153/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 97
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 98  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 153
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 186
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       +    V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 187 LDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 247 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 286
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 287 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 82
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 83  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 138
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDXELKI 171
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 172 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 232 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 271
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 272 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 42  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 96
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 97  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 152
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 185
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 186 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 246 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 285
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 286 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 21  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 75
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 76  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 131
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 164
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 165 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 224
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 225 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 264
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 265 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 308

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 34  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 88
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 89  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 144
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDXELKI 177
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 178 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 238 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 277
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 278 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 83
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 84  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 139
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 172
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 173 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 233 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 272
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 273 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 20  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 74
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 75  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 130
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 163
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 164 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 224 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 263
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 264 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 89
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 90  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 145
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 178
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 179 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 239 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 278
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 279 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 89
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 90  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 145
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 178
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 179 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 239 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 278
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 279 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 34  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 88
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 89  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 144
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 177
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 178 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 238 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 277
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 278 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRE-----LRLLKH 89
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 90  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 145
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 178
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 179 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 239 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 278
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 279 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 46  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 100
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 101 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 156
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 189
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 190 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 250 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 289
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 290 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 79
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 80  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 135
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 168
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 169 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 229 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 268
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 269 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 20  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 74
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 75  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 130
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 163
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 164 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 224 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 263
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 264 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 84
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 85  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 140
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 173
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 174 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 234 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 273
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 274 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 79
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 80  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 135
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 168
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 169 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 229 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 268
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 269 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 83
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 84  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 139
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 172
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 173 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 233 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 272
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 273 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 82
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 83  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 138
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 171
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 172 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 232 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 271
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 272 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 22  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 76
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 77  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 132
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 165
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 166 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 225
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 226 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 265
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 266 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 309

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 84
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 85  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 140
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 173
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 174 LDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 234 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 273
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 274 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 84
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 85  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 140
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 173
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 174 LDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 234 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 273
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 274 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 82
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 83  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 138
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 171
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 172 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 232 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 271
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 272 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 84
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 85  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 140
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 173
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 174 LDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 234 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 273
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 274 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 156/344 (45%), Gaps = 65/344 (18%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ K+G G + +V E  +    E V +KI++ + K +     EI +L+ L     GG  
Sbjct: 40  QLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR--EIKILENLR----GGPN 93
Query: 155 CVQIRNWFD--YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            + + +           +VFE +  +  DF  K  Y++     +R    ++L+++ + H 
Sbjct: 94  IITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHS 149
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
           + ++H D+KP N++ +  E+ K                         ++LID+G   F H
Sbjct: 150 MGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEFYH 183
Query: 273 --QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLA 328
             Q+++  V++R+++ PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L 
Sbjct: 184 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 329 MMERVLGPLPHH-----MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
            + +VLG    +       I  D R      R +R  W     S +              
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSEN-------------- 289
Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR 427
             QH+   + + +D L  LLRYD   RL AREA+ HP+F   V+
Sbjct: 290 --QHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 329

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 79
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 80  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 135
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 168
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 169 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 229 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 268
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 269 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + L+ +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 33  RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 87
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 88  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 143
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 176
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 177 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 236
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 237 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLAQMP 276
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 277 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 320

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 158/350 (45%), Gaps = 75/350 (21%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           R ++    G+GTFG V    +      VAIK V    ++R     E+ ++Q LA   +  
Sbjct: 24  RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR---ELQIMQDLAV--LHH 78
Query: 153 TRCVQIRNWF------DYRN-HICIVFEKLGPSLYDFLRKNSYR---SFPIDLVRELGRQ 202
              VQ++++F      D R+ ++ +V E +  +L+   R N YR   + P  L++    Q
Sbjct: 79  PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCR-NYYRRQVAPPPILIKVFLFQ 137
Query: 203 LLESVAFMH--ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
           L+ S+  +H   + + H D+KP N+L+  A                DG+          +
Sbjct: 138 LIRSIGCLHLPSVNVCHRDIKPHNVLVNEA----------------DGT----------L 171
Query: 261 KLIDFGST---TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEA 316
           KL DFGS    +    + +Y+ S R+YRAPE+I G   +    D+WSVGCI  E+  GE 
Sbjct: 172 KLCDFGSAKKLSPSEPNVAYICS-RYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP 230
Query: 317 LFQTHENLEHLAMMERVLGPLPHHMVIR----ADRRAEKYFRRGARLDWPDGATSRDSMR 372
           +F+   +   L  + RVLG  P   V+R    +    + Y  +G  + W           
Sbjct: 231 IFRGDNSAGQLHEIVRVLG-CPSREVLRKLNPSHTDVDLYNSKG--IPW----------- 276
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                    N+   H    A +  DLL  LL+Y P ER+K  EAL HP+F
Sbjct: 277 --------SNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 153/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 46  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 100
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 101 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 156
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 189
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +DFG       +    V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 190 LDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 250 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 289
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 290 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 151/348 (43%), Gaps = 76/348 (21%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + L  +G G +G V   +D   ++ VA+K        ++ +   YRE     + +L+ 
Sbjct: 29  RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE-----LRLLKH 83
Query: 145 LARHDIGG-----TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
           L   ++ G     T    I ++    + + +V   +G  L + ++  +      + V+ L
Sbjct: 84  LKHENVIGLLDVFTPATSIEDF----SEVYLVTTLMGADLNNIVKSQALSD---EHVQFL 136
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
             QLL  + ++H   +IH DLKP N+                            + + S 
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNV---------------------------AVNEDSE 169
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF 318
           ++++DFG      ++ +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL  G+ALF
Sbjct: 170 LRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
Query: 319 QTHENLEHLA-MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
              + ++ L  +ME V  P P  +   +   A  Y +                      L
Sbjct: 230 PGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ---------------------SL 268
Query: 378 LRLPNLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
             +P   +  +   A  L IDLL  +L  D  +R+ A EAL H +F++
Sbjct: 269 PPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 157/344 (45%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+ +     +K+ D+ +L+R + D               
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF-YLARHTDD--------------- 177
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
                      + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 178 -----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 154/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +D+G       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 153/337 (45%), Gaps = 50/337 (14%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMIEIDVLQRLARHD 149
           R + ++K+GEGT+G+V +  D    E VAIK +R  ++       A+ E+ +L+ L   +
Sbjct: 35  RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     +++++   + + + ++FE     L  ++ KN   S  + +++    QL+  V F
Sbjct: 95  I-----IELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVS--MRVIKSFLYQLINGVNF 147
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
            H  R +H DLKP+N+LL  ++  + P  K        G +   L ++  I +  F    
Sbjct: 148 CHSRRCLHRDLKPQNLLLSVSDASETPVLKI-------GDF--GLARAFGIPIRQF---- 194
Query: 270 FEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
                 ++ + T  YR PE++LG   ++   D+WS+ CI  E+     LF     ++ L 
Sbjct: 195 ------THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF 248
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            +  VLG LP                      WP G T+    +  +   R   L     
Sbjct: 249 KIFEVLG-LPDDTT------------------WP-GVTALPDWKQSFPKFRGKTLKRVLG 288
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
                + +DLL  +L  DP +R+ A+ AL HP+F+ +
Sbjct: 289 ALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN 325

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 154/341 (45%), Gaps = 72/341 (21%)
Query: 97  LSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           L K+GEGT+G V +  +N  E   L  I++ +         + EI +L+ L   +I    
Sbjct: 7   LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI---- 62
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFL-------RKNSYRSFPIDLVRELGRQLLESV 207
            V++ +    +  + +VFE L   L   L          + +SF +        QLL  +
Sbjct: 63  -VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL--------QLLNGI 113
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
           A+ H+ R++H DLKP+N+L+     +K+ D+  L+R+                    FG 
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFG-LARA--------------------FGI 152
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
                + +++ V T  YRAP+V++G   ++   D+WSVGCI  E+ +G  LF      + 
Sbjct: 153 PV---RKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ 209
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT--SRDSMRAVWKLLRLPNLI 384
           L  + R+LG  P+                    +WP+       D    V++ L   +  
Sbjct: 210 LMRIFRILGT-PNSK------------------NWPNVTELPKYDPNFTVYEPLPWESF- 249
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
           ++ +D S    IDLL  +L+ DP +R+ A++AL H +F  +
Sbjct: 250 LKGLDESG---IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 154/341 (45%), Gaps = 72/341 (21%)
Query: 97  LSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           L K+GEGT+G V +  +N  E   L  I++ +         + EI +L+ L   +I    
Sbjct: 7   LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI---- 62
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFL-------RKNSYRSFPIDLVRELGRQLLESV 207
            V++ +    +  + +VFE L   L   L          + +SF +        QLL  +
Sbjct: 63  -VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL--------QLLNGI 113
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
           A+ H+ R++H DLKP+N+L+     +K+ D+  L+R+                    FG 
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFG-LARA--------------------FGI 152
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
                + +++ V T  YRAP+V++G   ++   D+WSVGCI  E+ +G  LF      + 
Sbjct: 153 PV---RKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQ 209
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT--SRDSMRAVWKLLRLPNLI 384
           L  + R+LG  P+                    +WP+       D    V++ L   +  
Sbjct: 210 LMRIFRILGT-PNSK------------------NWPNVTELPKYDPNFTVYEPLPWESF- 249
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
           ++ +D S    IDLL  +L+ DP +R+ A++AL H +F  +
Sbjct: 250 LKGLDESG---IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 154/341 (45%), Gaps = 72/341 (21%)
Query: 97  LSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           L K+GEGT+G V +  +N  E   L  I++ +         + EI +L+ L   +I    
Sbjct: 7   LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI---- 62
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFL-------RKNSYRSFPIDLVRELGRQLLESV 207
            V++ +    +  + +VFE L   L   L          + +SF +        QLL  +
Sbjct: 63  -VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL--------QLLNGI 113
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
           A+ H+ R++H DLKP+N+L+     +K+ D+  L+R+                    FG 
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFG-LARA--------------------FGI 152
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
                + +++ + T  YRAP+V++G   ++   D+WSVGCI  E+ +G  LF      + 
Sbjct: 153 PV---RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ 209
Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT--SRDSMRAVWKLLRLPNLI 384
           L  + R+LG  P+                    +WP+       D    V++ L   +  
Sbjct: 210 LMRIFRILGT-PNSK------------------NWPNVTELPKYDPNFTVYEPLPWESF- 249
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
           ++ +D S    IDLL  +L+ DP +R+ A++AL H +F  +
Sbjct: 250 LKGLDESG---IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 152/348 (43%), Gaps = 76/348 (21%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + L  +G G +G V   +D   ++ VA+K        ++ +   YRE     + +L+ 
Sbjct: 29  RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE-----LRLLKH 83
Query: 145 LARHDIGG-----TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
           L   ++ G     T    I ++    + + +V   +G  L + ++    ++   + V+ L
Sbjct: 84  LKHENVIGLLDVFTPATSIEDF----SEVYLVTTLMGADLNNIVK---CQALSDEHVQFL 136
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
             QLL  + ++H   +IH DLKP N+                            + + S 
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNV---------------------------AVNEDSE 169
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF 318
           ++++DFG      ++ +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL  G+ALF
Sbjct: 170 LRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
Query: 319 QTHENLEHLA-MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
              + ++ L  +ME V  P P  +   +   A  Y +                      L
Sbjct: 230 PGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ---------------------SL 268
Query: 378 LRLPNLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
             +P   +  +   A  L IDLL  +L  D  +R+ A EAL H +F++
Sbjct: 269 PPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 153/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           + FG       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 153/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +D G       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 149/349 (42%), Gaps = 69/349 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 56  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 107
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--- 268
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 168 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 201
Query: 269 TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                + SY+ S R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L
Sbjct: 202 VRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 260
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
             + +VLG  P    IR        F+       P            W  +  P      
Sbjct: 261 VEIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------ 301
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
              +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 302 --RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 347

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 149/349 (42%), Gaps = 69/349 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 66  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 117
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--- 268
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 178 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 211
Query: 269 TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                + SY+ S R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L
Sbjct: 212 VRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 270
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
             + +VLG  P    IR        F+       P            W  +  P      
Sbjct: 271 VEIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------ 311
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
              +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 312 --RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 357

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 149/349 (42%), Gaps = 69/349 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 158
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--- 268
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 219 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 252
Query: 269 TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                + SY+ S R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L
Sbjct: 253 VRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 311
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
             + +VLG  P    IR        F+       P            W  +  P      
Sbjct: 312 VEIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------ 352
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
              +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 353 --RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 398

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 153/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +D G       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 153/344 (44%), Gaps = 68/344 (19%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L  + ++H   +IH DLKP N+                            + +   +K+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCELKI 166
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTH 321
           +D G       + +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL +G  LF   
Sbjct: 167 LDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           ++++ L ++ R++G                    GA L      +S  +   +  L ++P
Sbjct: 227 DHIDQLKLILRLVG------------------TPGAEL--LKKISSESARNYIQSLTQMP 266
Query: 382 NLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +   +V   A  L +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 267 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 149/349 (42%), Gaps = 69/349 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 64  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 115
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--- 268
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 176 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 209
Query: 269 TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                + SY+ S R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L
Sbjct: 210 VRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 268
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
             + +VLG  P    IR        F+       P            W  +  P      
Sbjct: 269 VEIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------ 309
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
              +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 310 --RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 355

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 113
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 174 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 207
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
              + +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L 
Sbjct: 208 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + +VLG  P    IR        F+       P            W  +  P       
Sbjct: 268 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 307
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
             +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 308 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 353

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 149/349 (42%), Gaps = 69/349 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 113
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--- 268
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 174 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 207
Query: 269 TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                + SY+ S R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L
Sbjct: 208 VRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 266
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
             + +VLG  P    IR        F+       P            W  +  P      
Sbjct: 267 VEIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------ 307
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
              +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 308 --RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 353

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 91
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 92  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 152 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 185
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
              + +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L 
Sbjct: 186 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + +VLG  P    IR        F+       P            W  +  P       
Sbjct: 246 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 285
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
             +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 286 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 331

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 47  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 98
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 99  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 159 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 192
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
              + +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L 
Sbjct: 193 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 252
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + +VLG  P    IR        F+       P            W  +  P       
Sbjct: 253 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 292
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
             +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 293 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 338

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 41  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 92
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 93  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 153 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 186
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
              + +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L 
Sbjct: 187 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 246
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + +VLG  P    IR        F+       P            W  +  P       
Sbjct: 247 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 286
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
             +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 287 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 332

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 91
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 92  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 152 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 185
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
              + +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L 
Sbjct: 186 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + +VLG  P    IR        F+       P            W  +  P       
Sbjct: 246 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 285
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
             +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 286 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 331

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 36  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 87
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 88  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 148 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 181
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
              + +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L 
Sbjct: 182 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 241
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + +VLG  P    IR        F+       P            W  +  P       
Sbjct: 242 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 281
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
             +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 282 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 327

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 149/349 (42%), Gaps = 69/349 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 33  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 84
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 85  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST--- 268
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 145 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 178
Query: 269 TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                + SY+ S R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L
Sbjct: 179 VRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 237
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
             + +VLG  P    IR        F+       P            W  +  P      
Sbjct: 238 VEIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------ 278
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
              +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 279 --RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 324

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 32  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 83
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 84  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 144 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 177
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
              + +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L 
Sbjct: 178 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 237
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + +VLG  P    IR        F+       P            W  +  P       
Sbjct: 238 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 277
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
             +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 278 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 323

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 151/348 (43%), Gaps = 76/348 (21%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + L  +G G +G V   +D   ++ VA+K        ++ +   YRE     + +L+ 
Sbjct: 21  RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE-----LRLLKH 75
Query: 145 LARHDIGG-----TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
           L   ++ G     T    I ++    + + +V   +G  L + ++    ++   + V+ L
Sbjct: 76  LKHENVIGLLDVFTPATSIEDF----SEVYLVTTLMGADLNNIVK---CQALSDEHVQFL 128
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
             QLL  + ++H   +IH DLKP N+                            + +   
Sbjct: 129 VYQLLRGLKYIHSAGIIHRDLKPSNV---------------------------AVNEDCE 161
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF 318
           ++++DFG      ++ +  V+TR YRAPE++L  + +N   D+WSVGCI+ EL  G+ALF
Sbjct: 162 LRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 221
Query: 319 QTHENLEHLA-MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
              + ++ L  +ME V  P P  +   +   A  Y +                      L
Sbjct: 222 PGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ---------------------SL 260
Query: 378 LRLPNLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTR 424
             +P   +  +   A  L IDLL  +L  D  +R+ A EAL H +F++
Sbjct: 261 PPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 308

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V     ++     E+ ++++L   +I     V++R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 140 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 173
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
              + +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L 
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + +VLG      +            R    ++ + A  +       K+ R         
Sbjct: 234 EIIKVLGTPTREQI------------REMNPNYTEFAFPQIKAHPWTKVFR--------- 272
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
             +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 273 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 80  YFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 140 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 173
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
              + +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L 
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + +VLG  P    IR        F+       P            W  +  P       
Sbjct: 234 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 273
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
             +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 274 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 154/345 (44%), Gaps = 67/345 (19%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQR 144
           + L  + + L K+GEGT+G V +  D++ + +VA+K +R           A+ EI +L+ 
Sbjct: 17  QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
           L   +I     V + +       + +VFE +   L   L +N         ++    QLL
Sbjct: 76  LHHPNI-----VSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLL 129
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
             VA  H+ R++H DLKP+N+L+ S                 DG          A+KL D
Sbjct: 130 RGVAHCHQHRILHRDLKPQNLLINS-----------------DG----------ALKLAD 162
Query: 265 FG---STTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQT 320
           FG   +     + +++ V T  YRAP+V++G   ++   D+WS+GCI  E+ +G+ LF  
Sbjct: 163 FGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
Query: 321 HENLEHLAMMERVLG-PLPHH--MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
             + + L  +  +LG P P     V       ++ F+   +  W                
Sbjct: 223 VTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSS-------------- 268
Query: 378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             +P    +         IDLL  +L +DP +R+ AR+A+ HP+F
Sbjct: 269 -IIPGFCQEG--------IDLLSNMLCFDPNKRISARDAMNHPYF 304

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 140 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 173
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
              + +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L 
Sbjct: 174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + +VLG  P    IR        F+       P            W  +  P       
Sbjct: 234 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 273
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
             +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 274 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 29  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 80
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 81  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 141 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 174
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
              + +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L 
Sbjct: 175 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 234
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + +VLG  P    IR        F+       P            W  +  P       
Sbjct: 235 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 274
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
             +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 275 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 320

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 140 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 173
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
              + +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L 
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + +VLG  P    IR        F+       P            W  +  P       
Sbjct: 234 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 273
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
             +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 274 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 140 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 173
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
              + +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L 
Sbjct: 174 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + +VLG  P    IR        F+       P            W  +  P       
Sbjct: 234 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 273
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
             +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 274 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 154/345 (44%), Gaps = 67/345 (19%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQR 144
           + L  + + L K+GEGT+G V +  D++ + +VA+K +R           A+ EI +L+ 
Sbjct: 17  QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
           L   +I     V + +       + +VFE +   L   L +N         ++    QLL
Sbjct: 76  LHHPNI-----VSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLL 129
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
             VA  H+ R++H DLKP+N+L+ S                 DG          A+KL D
Sbjct: 130 RGVAHCHQHRILHRDLKPQNLLINS-----------------DG----------ALKLAD 162
Query: 265 FG---STTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQT 320
           FG   +     + +++ V T  YRAP+V++G   ++   D+WS+GCI  E+ +G+ LF  
Sbjct: 163 FGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
Query: 321 HENLEHLAMMERVLG-PLPHH--MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
             + + L  +  +LG P P     V       ++ F+   +  W                
Sbjct: 223 VTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSS-------------- 268
Query: 378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             +P    +         IDLL  +L +DP +R+ AR+A+ HP+F
Sbjct: 269 -IIPGFCQEG--------IDLLSNMLCFDPNKRISARDAMNHPYF 304

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 92.4 bits (228), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 152/344 (44%), Gaps = 75/344 (21%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGG- 152
           L  +GEG++G V++C + +   +VAIK     +     ++ AM EI +L++L   ++   
Sbjct: 30  LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNL 89
Query: 153 -TRCVQIRNW---FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
              C + + W   F++ +H  +   +L P+  D+            +V++   Q++  + 
Sbjct: 90  LEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDY-----------QVVQKYLFQIINGIG 138
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           F H   +IH D+KPENIL+  +  VK+ D+ F    +  G  + +               
Sbjct: 139 FCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD--------------- 183
Query: 269 TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                     V+TR YRAPE+++G + +    D+W++GC++ E+  GE LF    +++ L
Sbjct: 184 ---------EVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQL 234
Query: 328 AMMERVLGPL-PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL--- 383
             +   LG L P H         ++ F +                  V+  +RLP +   
Sbjct: 235 YHIMMCLGNLIPRH---------QELFNKN----------------PVFAGVRLPEIKER 269
Query: 384 --IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
             + +     +  +IDL +  L  DP +R    E L H FF  D
Sbjct: 270 EPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 148/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V     ++     E+ ++++L   +I     V++R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 140 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 173
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
              + +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L 
Sbjct: 174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + +VLG      +            R    ++ + A  +       K+ R         
Sbjct: 234 EIIKVLGTPTREQI------------REMNPNYTEFAFPQIKAHPWTKVFR--------- 272
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
             +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 273 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 92.0 bits (227), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 142/333 (42%), Gaps = 58/333 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHD--IG 151
           L  +G G +G V    D      VAIK + R      + + A  E+ +L+ + RH+  IG
Sbjct: 30  LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-RHENVIG 88
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
                      D      +V   +G  L   ++   +     D ++ L  Q+L+ + ++H
Sbjct: 89  LLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIH 145
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
              +IH DLKP N+                            + +   +K++DFG     
Sbjct: 146 AAGIIHRDLKPGNL---------------------------AVNEDCELKILDFGLARQA 178
Query: 272 HQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
             +    V TR YRAPEVIL  + +    D+WSVGCI+ E+ +G+ LF+  ++L+ L  +
Sbjct: 179 DSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEI 238
Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRG-ARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
            +V G  P   V R      K + +G   L+  D A+                 I+ +  
Sbjct: 239 MKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFAS-----------------ILTNAS 281
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             A   ++LL+ +L  D  +R+ A EAL HP+F
Sbjct: 282 PLA---VNLLEKMLVLDAEQRVTAGEALAHPYF 311

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 91.7 bits (226), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 147/348 (42%), Gaps = 67/348 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V     ++     E+ ++++L   +I     V++R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT-- 269
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 140 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 173
Query: 270 FEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
              + +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L 
Sbjct: 174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + +VLG  P    IR        F+       P            W  +  P       
Sbjct: 234 EIIKVLG-TPTREQIREMNPNYTEFKFPQIKAHP------------WTKVFRP------- 273
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
             +  + I L   LL Y P  RL   EA  H FF  ++R P + +  G
Sbjct: 274 -RTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD-ELRDPNVKLPNG 319

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 158/369 (42%), Gaps = 52/369 (14%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI--EIDVLQRLARHD 149
           R +I   +G G++G V E +D  +K +VAIK I+R      +   I  EI +L RL    
Sbjct: 54  RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDH 113
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDL-VRELGRQLLESVA 208
           +     + I    +  + + +V E          R   Y +   +L ++ L   LL  V 
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLT---ELHIKTLLYNLLVGVK 170
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           ++H   ++H DLKP N L+     VKV D+   + +       S     P+   + L+ F
Sbjct: 171 YVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTF 230
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHEN 323
             T    +  +  V TR YRAPE+IL L  NY    D+WS+GCI  EL     L    EN
Sbjct: 231 PHTKNLKRQLTGHVVTRWYRAPELIL-LQENYTEAIDVWSIGCIFAEL-----LNMIKEN 284
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
           + + A     L P      +  D++A   F+   R        +RD +  ++ +L  P+ 
Sbjct: 285 VAYHA-DRGPLFPGSSCFPLSPDQKAGNDFKFHTR-------GNRDQLNVIFNILGTPSE 336
Query: 384 -------------------------IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
                                    + +    S+ D I LL+ +L ++P +R+   E L 
Sbjct: 337 EDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLA 396
Query: 419 HPFFTRDVR 427
           HPFF ++VR
Sbjct: 397 HPFF-KEVR 404

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 145/329 (44%), Gaps = 53/329 (16%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRLARHDIGGTR 154
           L K+GEGT+  V +        LVA+K +R  ++      A+ E+ +L+ L   +I    
Sbjct: 7   LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI---- 62
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
            V + +       + +VFE L   L  +L  +      +  V+    QLL  +A+ H  +
Sbjct: 63  -VTLHDIIHTEKSLTLVFEYLDKDLKQYL-DDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           ++H DLKP+N+L+     +K+ D+  L+R+       K++P           + T++++ 
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFG-LARA-------KSIP-----------TKTYDNE- 160
Query: 275 HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 333
               V T  YR P+++LG   ++   D+W VGCI  E+ +G  LF      E L  + R+
Sbjct: 161 ----VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRI 216
Query: 334 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 393
           LG                         WP G  S +  +           ++ H      
Sbjct: 217 LGTPTEET-------------------WP-GILSNEEFKTYNYPKYRAEALLSHAPRLDS 256
Query: 394 DLIDLLQGLLRYDPAERLKAREALRHPFF 422
           D  DLL  LL+++   R+ A +A++HPFF
Sbjct: 257 DGADLLTKLLQFEGRNRISAEDAMKHPFF 285

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 144/335 (42%), Gaps = 62/335 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGT 153
           L K+GEGT+G V +  + E  E+VA+K VR  +       +A+ EI +L+ L   +I   
Sbjct: 7   LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI--- 63
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +       + +VFE     L  +    +    P ++V+    QLL+ + F H  
Sbjct: 64  --VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGFCHSR 120
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTF 270
            ++H DLKP+N+L+                            ++  +KL +FG   +   
Sbjct: 121 NVLHRDLKPQNLLI---------------------------NRNGELKLANFGLARAFGI 153
Query: 271 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLA 328
             + +S  V T  YR P+V+ G   ++   D+WS GCI  EL  +G  LF  ++  + L 
Sbjct: 154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLK 213
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + R+LG                         WP      D     + +      ++  V
Sbjct: 214 RIFRLLG-------------------TPTEEQWPSMTKLPD--YKPYPMYPATTSLVNVV 252
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                   DLLQ LL+ +P +R+ A EAL+HP+F+
Sbjct: 253 PKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 143/335 (42%), Gaps = 62/335 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGT 153
           L K+GEGT+G V +  + E  E+VA+K VR  +       +A+ EI +L+ L   +I   
Sbjct: 7   LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI--- 63
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +       + +VFE     L  +    +    P ++V+    QLL+ + F H  
Sbjct: 64  --VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGFCHSR 120
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTF 270
            ++H DLKP+N+L+                            ++  +KL DFG   +   
Sbjct: 121 NVLHRDLKPQNLLI---------------------------NRNGELKLADFGLARAFGI 153
Query: 271 EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLA 328
             + +S  V T  YR P+V+ G   ++   D+WS GCI  EL  +   LF  ++  + L 
Sbjct: 154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLK 213
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + R+LG                         WP      D     + +      ++  V
Sbjct: 214 RIFRLLG-------------------TPTEEQWPSMTKLPD--YKPYPMYPATTSLVNVV 252
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                   DLLQ LL+ +P +R+ A EAL+HP+F+
Sbjct: 253 PKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 138/318 (43%), Gaps = 77/318 (24%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA-AMIEIDVLQRLARHDIGGTRCVQI 158
           +GEG+F    +C   +  +  A+KI   I+K  EA    EI  L+    H       V++
Sbjct: 19  LGEGSFSICRKCVHKKSNQAFAVKI---ISKRMEANTQKEITALKLCEGH----PNIVKL 71
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
              F  + H  +V E L G  L++ ++K  +  F       + R+L+ +V+ MH++ ++H
Sbjct: 72  HEVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHDVGVVH 129
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DLKPEN+L                        F +   +  IK+IDFG    +  D+  
Sbjct: 130 RDLKPENLL------------------------FTDENDNLEIKIIDFGFARLKPPDNQP 165
Query: 278 VVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 334
           + +   T HY APE++   G++  CDLWS+G IL  + SG+  FQ+H         +R L
Sbjct: 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH---------DRSL 216
Query: 335 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 394
                  +++  ++ +  F   A                 WK          +V   A D
Sbjct: 217 TCTSAVEIMKKIKKGDFSFEGEA-----------------WK----------NVSQEAKD 249
Query: 395 LIDLLQGLLRYDPAERLK 412
           LI   QGLL  DP +RLK
Sbjct: 250 LI---QGLLTVDPNKRLK 264

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 88.6 bits (218), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 152/365 (41%), Gaps = 70/365 (19%)
Query: 79  DGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV--------RS 127
           +  Y   IG++   +  R + L  +G G  G V   +D   +  VAIK +         +
Sbjct: 8   NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 128 INKYREAAMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
              YRE       VL ++  H   IG       +   +    + IV E +  +L   ++ 
Sbjct: 68  KRAYREL------VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   + +  L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
             G+ F   P                     YVV TR+YRAPEVILG+G+    D+WSVG
Sbjct: 177 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
           CI+ E+  G  LF   ++++    ++E++  P P  M      V        KY      
Sbjct: 213 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
             +PD     DS               +H    A    DLL  +L  D ++R+   EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
           HP+  
Sbjct: 318 HPYIN 322

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 88.2 bits (217), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 154/365 (42%), Gaps = 60/365 (16%)
Query: 74  RPDDKDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           R    +  Y   IG++   +  R + L  +G G  G V   +D   +  VAIK + R   
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ VL ++  H   IG       +   +    + IV E +  +L   ++ 
Sbjct: 63  NQTHAKRAYREL-VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   + +  L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
             G+ F   P                     YVV TR+YRAPEVILG+G+    D+WSVG
Sbjct: 177 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
           CI+ E+  G  LF   ++++    ++E++  P P  M      V        KY      
Sbjct: 213 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
             +PD     DS               +H    A    DLL  +L  D ++R+   EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
           HP+  
Sbjct: 318 HPYIN 322

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 150/333 (45%), Gaps = 91/333 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+ C D    +  A+K++  R + +   +E+ + E+ +L++L   +I     
Sbjct: 40  LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI----- 94
Query: 156 VQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           +++  +F+ + +  +V E   G  L+D +     R   +D  R + RQ+L  + +MH+ +
Sbjct: 95  MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVLSGITYMHKNK 152
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE-H 272
           ++H DLKPEN+LL S               SKD +          I++IDFG ST FE  
Sbjct: 153 IVHRDLKPENLLLES--------------KSKDAN----------IRIIDFGLSTHFEAS 188
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
           +     + T +Y APEV+ G  ++  CD+WS G IL  L SG   F              
Sbjct: 189 KKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF-------------- 233
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLRLPNLIMQHVD 389
                                         +GA   D ++ V K      LP    + V 
Sbjct: 234 ------------------------------NGANEYDILKKVEKGKYTFELPQ--WKKVS 261
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
            SA DLI   + +L Y P+ R+ AR+AL H + 
Sbjct: 262 ESAKDLI---RKMLTYVPSMRISARDALDHEWI 291

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 152/365 (41%), Gaps = 70/365 (19%)
Query: 79  DGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV--------RS 127
           +  Y   IG++   +  R + L  +G G  G VV  +D   +  VAIK +         +
Sbjct: 8   NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 128 INKYREAAMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
              YRE       VL ++  H   IG       +   +    + IV E +  +L   ++ 
Sbjct: 68  KRAYREL------VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   + +  L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
             G+ F   P                     YVV TR+YRAPEVILG+G+    D+WSVG
Sbjct: 177 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
            I+ E+  G  LF   ++++    ++E++  P P  M      V        KY      
Sbjct: 213 VIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
             +PD     DS               +H    A    DLL  +L  D ++R+   EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
           HP+  
Sbjct: 318 HPYIN 322

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 153/365 (41%), Gaps = 60/365 (16%)
Query: 74  RPDDKDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           R    +  Y   IG++   +  R + L  +G G  G V   +D   +  VAIK + R   
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ VL +   H   IG       +   +    + IV E +  +L   ++ 
Sbjct: 63  NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   + +  L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
             G+ F   P                     YVV TR+YRAPEVILG+G+    D+WSVG
Sbjct: 177 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
           CI+ E+  G  LF   ++++    ++E++  P P  M      V        KY      
Sbjct: 213 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
             +PD     DS               +H    A    DLL  +L  D ++R+   EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
           HP+  
Sbjct: 318 HPYIN 322

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 150/333 (45%), Gaps = 91/333 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+ C D    +  A+K++  R + +   +E+ + E+ +L++L   +I     
Sbjct: 57  LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI----- 111
Query: 156 VQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           +++  +F+ + +  +V E   G  L+D +     R   +D  R + RQ+L  + +MH+ +
Sbjct: 112 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVLSGITYMHKNK 169
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE-H 272
           ++H DLKPEN+LL S               SKD +          I++IDFG ST FE  
Sbjct: 170 IVHRDLKPENLLLES--------------KSKDAN----------IRIIDFGLSTHFEAS 205
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
           +     + T +Y APEV+ G  ++  CD+WS G IL  L SG   F              
Sbjct: 206 KKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF-------------- 250
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLRLPNLIMQHVD 389
                                         +GA   D ++ V K      LP    + V 
Sbjct: 251 ------------------------------NGANEYDILKKVEKGKYTFELPQ--WKKVS 278
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
            SA DLI   + +L Y P+ R+ AR+AL H + 
Sbjct: 279 ESAKDLI---RKMLTYVPSMRISARDALDHEWI 308

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 150/333 (45%), Gaps = 91/333 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+ C D    +  A+K++  R + +   +E+ + E+ +L++L   +I     
Sbjct: 58  LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI----- 112
Query: 156 VQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           +++  +F+ + +  +V E   G  L+D +     R   +D  R + RQ+L  + +MH+ +
Sbjct: 113 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVLSGITYMHKNK 170
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE-H 272
           ++H DLKPEN+LL S               SKD +          I++IDFG ST FE  
Sbjct: 171 IVHRDLKPENLLLES--------------KSKDAN----------IRIIDFGLSTHFEAS 206
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
           +     + T +Y APEV+ G  ++  CD+WS G IL  L SG   F              
Sbjct: 207 KKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF-------------- 251
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLRLPNLIMQHVD 389
                                         +GA   D ++ V K      LP    + V 
Sbjct: 252 ------------------------------NGANEYDILKKVEKGKYTFELPQ--WKKVS 279
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
            SA DLI   + +L Y P+ R+ AR+AL H + 
Sbjct: 280 ESAKDLI---RKMLTYVPSMRISARDALDHEWI 309

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 150/333 (45%), Gaps = 91/333 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+ C D    +  A+K++  R + +   +E+ + E+ +L++L   +I     
Sbjct: 34  LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI----- 88
Query: 156 VQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           +++  +F+ + +  +V E   G  L+D +     R   +D  R + RQ+L  + +MH+ +
Sbjct: 89  MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVLSGITYMHKNK 146
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE-H 272
           ++H DLKPEN+LL S               SKD +          I++IDFG ST FE  
Sbjct: 147 IVHRDLKPENLLLES--------------KSKDAN----------IRIIDFGLSTHFEAS 182
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
           +     + T +Y APEV+ G  ++  CD+WS G IL  L SG   F              
Sbjct: 183 KKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF-------------- 227
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLRLPNLIMQHVD 389
                                         +GA   D ++ V K      LP    + V 
Sbjct: 228 ------------------------------NGANEYDILKKVEKGKYTFELPQ--WKKVS 255
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
            SA DLI   + +L Y P+ R+ AR+AL H + 
Sbjct: 256 ESAKDLI---RKMLTYVPSMRISARDALDHEWI 285

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 322 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 322 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 127 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------ 177
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 178 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
Query: 322 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 277
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 278 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 153/365 (41%), Gaps = 60/365 (16%)
Query: 74  RPDDKDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           R    +  Y   IG++   +  R + L  +G G  G V   +D   +  VAIK + R   
Sbjct: 4   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 63
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ VL +   H   IG       +   +    + IV E +  +L   ++ 
Sbjct: 64  NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ- 121
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   + +  L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++
Sbjct: 122 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 177
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
             G+ F   P                     YVV TR+YRAPEVILG+G+    D+WSVG
Sbjct: 178 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVG 213
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
           CI+ E+  G  LF   ++++    ++E++  P P  M      V        KY      
Sbjct: 214 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFE 273
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
             +PD     DS               +H    A    DLL  +L  D ++R+   EAL+
Sbjct: 274 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318
Query: 419 HPFFT 423
           HP+  
Sbjct: 319 HPYIN 323

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 153/365 (41%), Gaps = 60/365 (16%)
Query: 74  RPDDKDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           R    +  Y   IG++   +  R + L  +G G  G V   +D   +  VAIK + R   
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ VL +   H   IG       +   +    + IV E +  +L   ++ 
Sbjct: 63  NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   + +  L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
             G+ F   P                     YVV TR+YRAPEVILG+G+    D+WSVG
Sbjct: 177 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
           CI+ E+  G  LF   ++++    ++E++  P P  M      V        KY      
Sbjct: 213 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
             +PD     DS               +H    A    DLL  +L  D ++R+   EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
           HP+  
Sbjct: 318 HPYIN 322

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 153/365 (41%), Gaps = 60/365 (16%)
Query: 74  RPDDKDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           R    +  Y   IG++   +  R + L  +G G  G V   +D   +  VAIK + R   
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ VL +   H   IG       +   +    + IV E +  +L   ++ 
Sbjct: 63  NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   + +  L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
             G+ F   P                     YVV TR+YRAPEVILG+G+    D+WSVG
Sbjct: 177 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
           CI+ E+  G  LF   ++++    ++E++  P P  M      V        KY      
Sbjct: 213 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
             +PD     DS               +H    A    DLL  +L  D ++R+   EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
           HP+  
Sbjct: 318 HPYIN 322

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 152/365 (41%), Gaps = 60/365 (16%)
Query: 74  RPDDKDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           R    +  Y   IG++   +  R + L  +G G  G V   +D   +  VAIK + R   
Sbjct: 5   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 64
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ VL +   H   IG       +   +    + IV E +  +L   ++ 
Sbjct: 65  NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ- 122
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   + +  L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++
Sbjct: 123 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 178
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
             G+ F  +P                       V TR+YRAPEVILG+G+    D+WSVG
Sbjct: 179 --GTSFMMVP----------------------FVVTRYYRAPEVILGMGYKENVDIWSVG 214
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
           CI+ E+  G  LF   ++++    ++E++  P P  M      V        KY      
Sbjct: 215 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFE 274
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
             +PD     DS               +H    A    DLL  +L  D ++R+   EAL+
Sbjct: 275 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 319
Query: 419 HPFFT 423
           HP+  
Sbjct: 320 HPYIN 324

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 152/365 (41%), Gaps = 60/365 (16%)
Query: 74  RPDDKDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           R    +  Y   IG++   +  R + L  +G G  G V   +D   +  VAIK + R   
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ VL +   H   IG       +   +    + IV E +  +L   ++ 
Sbjct: 63  NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   + +  L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
             G+ F   P+                      V TR+YRAPEVILG+G+    D+WSVG
Sbjct: 177 --GTSFMMTPE----------------------VVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
           CI+ E+  G  LF   ++++    ++E++  P P  M      V        KY      
Sbjct: 213 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
             +PD     DS               +H    A    DLL  +L  D ++R+   EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNALKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
           HP+  
Sbjct: 318 HPYIN 322

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 154/349 (44%), Gaps = 84/349 (24%)
Query: 80  GHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMI 137
           G ++ +   +L+   + + K+G G +G+V+ C D       AIKI+R  S++    + ++
Sbjct: 25  GMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL 84
Query: 138 EIDVLQRLARHDIGGTRCVQIRNWF-DYRNHICIVFEKLGPSLYD-FLRKNSYRSFPIDL 195
           E   + +L  H       +++ ++F D RN+  ++    G  L+D  + +  +      +
Sbjct: 85  EEVAVLKLLDH----PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV 140
Query: 196 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 255
           +    +Q+L  V ++H+  ++H DLKPEN+LL S E                        
Sbjct: 141 II---KQVLSGVTYLHKHNIVHRDLKPENLLLESKE------------------------ 173
Query: 256 KSSAIKLIDFG-STTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
           K + IK++DFG S  FE+Q      + T +Y APEV L   ++  CD+WS+G IL  L +
Sbjct: 174 KDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLA 232
Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
           G   F    + E L  +E+                  KY       D P+          
Sbjct: 233 GYPPFGGQTDQEILRKVEK-----------------GKY-----TFDSPE---------- 260
Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
            WK          +V   A DLI   + +L++D   R+ A++AL HP+ 
Sbjct: 261 -WK----------NVSEGAKDLI---KQMLQFDSQRRISAQQALEHPWI 295

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 153/365 (41%), Gaps = 60/365 (16%)
Query: 74  RPDDKDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           R    +  Y   IG++   +  R + L  +G G  G V   +D   +  VAIK + R   
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ VL +   H   IG       +   +    + IV E +  +L   ++ 
Sbjct: 63  NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   + +  L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
             G+ F   P                     YVV TR+YRAPEVILG+G+    D+WSVG
Sbjct: 177 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
           CI+ E+  G  LF   ++++    ++E++  P P  M      V        KY      
Sbjct: 213 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
             +PD     DS               +H    A    DLL  +L  D ++R+   EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
           HP+  
Sbjct: 318 HPYIN 322

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 151/365 (41%), Gaps = 70/365 (19%)
Query: 79  DGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV--------RS 127
           +  Y   IG++   +  R + L  +G G  G V   +D   +  VAIK +         +
Sbjct: 8   NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 128 INKYREAAMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
              YRE       VL ++  H   IG       +   +    + IV E +  +L   ++ 
Sbjct: 68  KRAYREL------VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   + +  L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
             G+ F   P                     YVV TR+YRAPEVILG+G+    D+WSVG
Sbjct: 177 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
            I+ E+  G  LF   ++++    ++E++  P P  M      V        KY      
Sbjct: 213 VIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
             +PD     DS               +H    A    DLL  +L  D ++R+   EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
           HP+  
Sbjct: 318 HPYIN 322

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 322 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 140/342 (40%), Gaps = 84/342 (24%)
Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL 145
               R  I+  +G+G+FG+V++C D   ++  A+K++      NK     + E+++L++L
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
              +I     +++    +  +   IV E   G  L+D + K   + F       + +Q+ 
Sbjct: 79  DHPNI-----MKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVF 131
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
             + +MH+  ++H DLKPENILL S E                        K   IK+ID
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIID 167
Query: 265 FGSTTFEHQDHSYV--VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
           FG +T   Q+      + T +Y APEV+ G  ++  CD+WS G IL  L SG   F    
Sbjct: 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKN 226
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
             + L  +E                   KY       D P   T  D             
Sbjct: 227 EYDILKRVE-----------------TGKY-----AFDLPQWRTISD------------- 251
Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
                      D  DL++ +L + P+ R+ A + L HP+  +
Sbjct: 252 -----------DAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 322 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 140/342 (40%), Gaps = 84/342 (24%)
Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL 145
               R  I+  +G+G+FG+V++C D   ++  A+K++      NK     + E+++L++L
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
              +I     +++    +  +   IV E   G  L+D + K   + F       + +Q+ 
Sbjct: 79  DHPNI-----MKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVF 131
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
             + +MH+  ++H DLKPENILL S E                        K   IK+ID
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIID 167
Query: 265 FGSTTFEHQDHSYV--VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
           FG +T   Q+      + T +Y APEV+ G  ++  CD+WS G IL  L SG   F    
Sbjct: 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKN 226
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
             + L  +E                   KY       D P   T  D             
Sbjct: 227 EYDILKRVE-----------------TGKY-----AFDLPQWRTISD------------- 251
Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
                      D  DL++ +L + P+ R+ A + L HP+  +
Sbjct: 252 -----------DAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 145/341 (42%), Gaps = 58/341 (17%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIG 151
           +I+  +G G +G V         + VAIK + +   +    +  + E+ +L+     +I 
Sbjct: 58  EIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNII 117
Query: 152 GTRCVQIRNWFDYR--NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
             + + +R    Y     + +V + +   L+  +  +S +   ++ VR    QLL  + +
Sbjct: 118 AIKDI-LRPTVPYGEFKSVYVVLDLMESDLHQII--HSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           MH  ++IH DLKP N+L+     +K+ D+   + L  S  +  YF               
Sbjct: 175 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM-------------- 220
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
                    +  V+TR YRAPE++L L  +    DLWSVGCI  E+ +   LF     + 
Sbjct: 221 ---------TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH 271
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
            L ++  VLG  P   VI+                    A   + +RA  + L     + 
Sbjct: 272 QLQLIMMVLG-TPSPAVIQ--------------------AVGAERVRAYIQSLPPRQPVP 310
Query: 386 QHVDHSAGD--LIDLLQGLLRYDPAERLKAREALRHPFFTR 424
               +   D   + LL  +LR++P+ R+ A  ALRHPF  +
Sbjct: 311 WETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 351

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 97/229 (42%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+     +S +   F   P      
Sbjct: 132 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN---FMMTP------ 182
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ EL  G  +FQ  
Sbjct: 183 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 226
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR-----GARLD--WPDGATSRDSMRAV 374
           ++++    +   LG      +         Y        G   +  +PD     +S R  
Sbjct: 227 DHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDK 286
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
            K                    DLL  +L  DP +R+   EALRHP+ T
Sbjct: 287 IK---------------TSQARDLLSKMLVIDPDKRISVDEALRHPYIT 320

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 222
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 223 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 322 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 322
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 323 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 149/345 (43%), Gaps = 64/345 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGT 153
           L+K+G+GTFG+V +    +  + VA+K V   N+   +   A+ EI +LQ L   ++   
Sbjct: 22  LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 81
Query: 154 RCVQIRNWFDY---RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
             +       Y   +  I +VF+     L   L  N    F +  ++ + + LL  + ++
Sbjct: 82  IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNGLYYI 140
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---- 266
           H  +++H D+K  N+L+                 ++DG           +KL DFG    
Sbjct: 141 HRNKILHRDMKAANVLI-----------------TRDG----------VLKLADFGLARA 173
Query: 267 -STTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHE 322
            S     Q + Y   V T  YR PE++LG   +  P DLW  GCI+ E+ +   + Q + 
Sbjct: 174 FSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 233
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS--RDSMRAVWKLLRL 380
               LA++ ++ G +   +    D      +    +L+   G     +D ++A  +    
Sbjct: 234 EQHQLALISQLCGSITPEVWPNVDN-----YELYEKLELVKGQKRKVKDRLKAYVR---- 284
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
                   D  A DLID    LL  DPA+R+ + +AL H FF  D
Sbjct: 285 --------DPYALDLID---KLLVLDPAQRIDSDDALNHDFFWSD 318

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 145/341 (42%), Gaps = 58/341 (17%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIG 151
           +I+  +G G +G V         + VAIK + +   +    +  + E+ +L+     +I 
Sbjct: 57  EIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNII 116
Query: 152 GTRCVQIRNWFDYR--NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
             + + +R    Y     + +V + +   L+  +  +S +   ++ VR    QLL  + +
Sbjct: 117 AIKDI-LRPTVPYGEFKSVYVVLDLMESDLHQII--HSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           MH  ++IH DLKP N+L+     +K+ D+   + L  S  +  YF               
Sbjct: 174 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM-------------- 219
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
                    +  V+TR YRAPE++L L  +    DLWSVGCI  E+ +   LF     + 
Sbjct: 220 ---------TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH 270
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
            L ++  VLG  P   VI+                    A   + +RA  + L     + 
Sbjct: 271 QLQLIMMVLG-TPSPAVIQ--------------------AVGAERVRAYIQSLPPRQPVP 309
Query: 386 QHVDHSAGD--LIDLLQGLLRYDPAERLKAREALRHPFFTR 424
               +   D   + LL  +LR++P+ R+ A  ALRHPF  +
Sbjct: 310 WETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
            +VFE +  +  DF  K  Y++     +R    ++L+++ + H + ++H D+KP N+L +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVL-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
             E+ K                         ++LID+G   F H  Q+++  V++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
           PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG    +    
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
              I  D R      R +R  W     S +                QH+   + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
             LLRYD   RL AREA+ HP+F   V+
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVK 329

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 222
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 223 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 322 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 322
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 323 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 185
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 186 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 322 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 285
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 286 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 149/345 (43%), Gaps = 64/345 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGT 153
           L+K+G+GTFG+V +    +  + VA+K V   N+   +   A+ EI +LQ L   ++   
Sbjct: 23  LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 154 RCVQIRNWFDY---RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
             +       Y   +  I +VF+     L   L  N    F +  ++ + + LL  + ++
Sbjct: 83  IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---- 266
           H  +++H D+K  N+L+                 ++DG           +KL DFG    
Sbjct: 142 HRNKILHRDMKAANVLI-----------------TRDG----------VLKLADFGLARA 174
Query: 267 -STTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHE 322
            S     Q + Y   V T  YR PE++LG   +  P DLW  GCI+ E+ +   + Q + 
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS--RDSMRAVWKLLRL 380
               LA++ ++ G +   +    D      +    +L+   G     +D ++A  +    
Sbjct: 235 EQHQLALISQLCGSITPEVWPNVDN-----YELYEKLELVKGQKRKVKDRLKAYVR---- 285
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
                   D  A DLID    LL  DPA+R+ + +AL H FF  D
Sbjct: 286 --------DPYALDLID---KLLVLDPAQRIDSDDALNHDFFWSD 319

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 178
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 179 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
Query: 322 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 278
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 279 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 185
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 186 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 322 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 285
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 286 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 322 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 178
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 179 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
Query: 322 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 278
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 279 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 177
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 178 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
Query: 322 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 277
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 278 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 184
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 185 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 322 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 284
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 285 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ F   P      
Sbjct: 133 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTSFMMTP------ 183
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                          YVV TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 184 ---------------YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 227
Query: 322 ENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
           + ++    ++E++  P P  M      V        KY        +PD     DS    
Sbjct: 228 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADS---- 283
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                      +H    A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 284 -----------EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 35/232 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           +G G FGQV +C +      +A KI+++   K +E    EI V+ +L   ++     +Q+
Sbjct: 97  LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANL-----IQL 151
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
            + F+ +N I +V E + G  L+D +   SY    +D +  + +Q+ E +  MH++ ++H
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFM-KQICEGIRHMHQMYILH 210
Query: 218 TDLKPENILLVS--AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
            DLKPENIL V+  A+ +K+ D+  L+R  K     K          ++FG         
Sbjct: 211 LDLKPENILCVNRDAKQIKIIDFG-LARRYKPREKLK----------VNFG--------- 250
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                T  + APEV+     ++P D+WSVG I   L SG + F    + E L
Sbjct: 251 -----TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL 297

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 38/232 (16%)
Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL 145
               R  I+  +G+G+FG+V++C D   ++  A+K++      NK     + E+++L++L
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
              +I     +++    +  +   IV E   G  L+D + K   + F       + +Q+ 
Sbjct: 79  DHPNI-----MKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVF 131
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
             + +MH+  ++H DLKPENILL S E                        K   IK+ID
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIID 167
Query: 265 FGSTTFEHQDHSYV--VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           FG +T   Q+      + T +Y APEV+ G  ++  CD+WS G IL  L SG
Sbjct: 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSG 218

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 149/345 (43%), Gaps = 64/345 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGT 153
           L+K+G+GTFG+V +    +  + VA+K V   N+   +   A+ EI +LQ L   ++   
Sbjct: 23  LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 154 RCVQIRNWFDY---RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
             +       Y   +  I +VF+     L   L  N    F +  ++ + + LL  + ++
Sbjct: 83  IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---- 266
           H  +++H D+K  N+L+                 ++DG           +KL DFG    
Sbjct: 142 HRNKILHRDMKAANVLI-----------------TRDG----------VLKLADFGLARA 174
Query: 267 -STTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHE 322
            S     Q + Y   V T  YR PE++LG   +  P DLW  GCI+ E+ +   + Q + 
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS--RDSMRAVWKLLRL 380
               LA++ ++ G +   +    D      +    +L+   G     +D ++A  +    
Sbjct: 235 EQHQLALISQLCGSITPEVWPNVDN-----YELYEKLELVKGQKRKVKDRLKAYVR---- 285
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
                   D  A DLID    LL  DPA+R+ + +AL H FF  D
Sbjct: 286 --------DPYALDLID---KLLVLDPAQRIDSDDALNHDFFWSD 319

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 47/229 (20%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++                
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA---------------- 176
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
             +F  T +        V TR+YRAPEVILG+G+    D+WSVGCI+ EL  G  +FQ  
Sbjct: 177 CTNFMMTPY--------VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGT 228
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR-----GARLD--WPDGATSRDSMRAV 374
           ++++    +   LG      +         Y        G + +  +PD     +S R  
Sbjct: 229 DHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDK 288
Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
            K                    DLL  +L  DP +R+   EALRHP+ T
Sbjct: 289 IK---------------TSQARDLLSKMLVIDPDKRISVDEALRHPYIT 322

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 164/361 (45%), Gaps = 50/361 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMI--EIDVLQRLARHDIGGTRCV 156
           +G G++G V   +D   ++ VAIK V R      +   I  EI +L RL    I     +
Sbjct: 34  IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 157 QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV----AFMHE 212
            I +     + + IV E     L    +       PI L  E  + +L ++     F+HE
Sbjct: 94  IIPDDLLKFDELYIVLEIADSDLKKLFKT------PIFLTEEHIKTILYNLLLGENFIHE 147
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSR---SSKDGSYFKNLPKSSAIKLIDFGSTT 269
             +IH DLKP N LL     VKV D+  L+R   S KD +   +L ++         +  
Sbjct: 148 SGIIHRDLKPANCLLNQDCSVKVCDFG-LARTINSEKDTNIVNDLEENEEPGP---HNKN 203
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHL 327
            + Q  S+VV TR YRAPE+IL L  NY    D+WS GCI  EL +   + Q+H N    
Sbjct: 204 LKKQLTSHVV-TRWYRAPELIL-LQENYTKSIDIWSTGCIFAELLN---MLQSHIN---- 254
Query: 328 AMMERV-LGPLPHHMVIRADRRAEKYFRRGARLDWPD------GATSRDSMR-----AVW 375
               R  L P      +  DR ++K   +  R D  +      G  + D ++      V 
Sbjct: 255 DPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNR-DQLNIIFNIIGTPTEDDLKNINKPEVI 313
Query: 376 KLLRL-----PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
           K ++L     P  + Q     + D I+LL+ +L+++P +R+   +AL HP+  +DVR+  
Sbjct: 314 KYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYL-KDVRKKK 372
Query: 431 L 431
           L
Sbjct: 373 L 373

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
            +VFE +  +  DF  K  Y++     +R    ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
             E+ K                         ++LID+G   F H  Q+++  V++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
           PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG    +    
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
              I  D R      R +R  W     S +                QH+   + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
             LLRYD   RL AREA+ HP+F   V+
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVK 329

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 149/345 (43%), Gaps = 64/345 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGT 153
           L+K+G+GTFG+V +    +  + VA+K V   N+   +   A+ EI +LQ L   ++   
Sbjct: 23  LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 154 RCVQIRNWFDY---RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
             +       Y   +  I +VF+     L   L  N    F +  ++ + + LL  + ++
Sbjct: 83  IEICRTKASPYNRCKASIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---- 266
           H  +++H D+K  N+L+                 ++DG           +KL DFG    
Sbjct: 142 HRNKILHRDMKAANVLI-----------------TRDG----------VLKLADFGLARA 174
Query: 267 -STTFEHQDHSYV--VSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHE 322
            S     Q + Y   V T  YR PE++LG   +  P DLW  GCI+ E+ +   + Q + 
Sbjct: 175 FSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 234
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS--RDSMRAVWKLLRL 380
               LA++ ++ G +   +    D      +    +L+   G     +D ++A  +    
Sbjct: 235 EQHQLALISQLCGSITPEVWPNVDN-----YELYEKLELVKGQKRKVKDRLKAYVR---- 285
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
                   D  A DLID    LL  DPA+R+ + +AL H FF  D
Sbjct: 286 --------DPYALDLID---KLLVLDPAQRIDSDDALNHDFFWSD 319

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 152/365 (41%), Gaps = 60/365 (16%)
Query: 74  RPDDKDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           R    +  Y   IG++   +  R + L  +G G  G V   +D   +  VAIK + R   
Sbjct: 8   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 67
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ VL +   H   IG       +   +    + IV E +  +L   ++ 
Sbjct: 68  NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ- 125
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   + +  L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++
Sbjct: 126 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 181
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
             G+ F   P                     YVV TR+YRAPEVILG+G+    DLWSVG
Sbjct: 182 --GTSFMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDLWSVG 217
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
           CI+ E+   + LF   + ++    ++E++  P P  M      V        KY      
Sbjct: 218 CIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFE 277
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
             +PD     DS               +H    A    DLL  +L  D ++R+   EAL+
Sbjct: 278 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 322
Query: 419 HPFFT 423
           HP+  
Sbjct: 323 HPYIN 327

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
            +VFE +  +  DF  K  Y++     +R    ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
             E+ K                         ++LID+G   F H  Q+++  V++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
           PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG    +    
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
              I  D R      R +R  W     S +                QH+   + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
             LLRYD   RL AREA+ HP+F   V+
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVK 329

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
            +VFE +  +  DF  K  Y++     +R    ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
             E+ K                         ++LID+G   F H  Q+++  V++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
           PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG    +    
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
              I  D R      R +R  W     S +                QH+   + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
             LLRYD   RL AREA+ HP+F   V+
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVK 329

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
            +VFE +  +  DF  K  Y++     +R    ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
             E+ K                         ++LID+G   F H  Q+++  V++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
           PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG    +    
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
              I  D R      R +R  W     S +                QH+   + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
             LLRYD   RL AREA+ HP+F   V+
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVK 329

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 151/360 (41%), Gaps = 60/360 (16%)
Query: 79  DGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREA 134
           +  Y   IG++   +  R + L  +G G  G V   +D   +  VAIK + R       A
Sbjct: 2   NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 61
Query: 135 --AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRS 190
             A  E+ VL +   H   IG       +   +    + IV E +  +L   ++      
Sbjct: 62  KRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ----ME 116
Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250
              + +  L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++  G+ 
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA--GTS 173
Query: 251 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 310
           F   P                     YVV TR+YRAPEVILG+G+    DLWSVGCI+ E
Sbjct: 174 FMMTP---------------------YVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGE 211
Query: 311 LCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGARLDWPD 363
           +   + LF   + ++    ++E++  P P  M      V        KY        +PD
Sbjct: 212 MVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD 271
Query: 364 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                DS               +H    A    DLL  +L  D ++R+   EAL+HP+  
Sbjct: 272 VLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 316

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
            +VFE +  +  DF  K  Y++     +R    ++L+++ + H + ++H D+KP N++ +
Sbjct: 108 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 162
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
             E+ K                         ++LID+G   F H  Q+++  V++R+++ 
Sbjct: 163 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 197
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
           PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG    +    
Sbjct: 198 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 257
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
              I  D R      R +R  W     S +                QH+   + + +D L
Sbjct: 258 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 299
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
             LLRYD   RL AREA+ HP+F   V+
Sbjct: 300 DKLLRYDHQSRLTAREAMEHPYFYTVVK 327

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
            +VFE +  +  DF  K  Y++     +R    ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
             E+ K                         ++LID+G   F H  Q+++  V++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
           PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG    +    
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
              I  D R      R +R  W     S +                QH+   + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
             LLRYD   RL AREA+ HP+F   V+
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVK 329

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
            +VFE +  +  DF  K  Y++     +R    ++L+++ + H + ++H D+KP N++ +
Sbjct: 115 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 169
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
             E+ K                         ++LID+G   F H  Q+++  V++R+++ 
Sbjct: 170 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 204
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
           PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG    +    
Sbjct: 205 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 264
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
              I  D R      R +R  W     S +                QH+   + + +D L
Sbjct: 265 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 306
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
             LLRYD   RL AREA+ HP+F   V+
Sbjct: 307 DKLLRYDHQSRLTAREAMEHPYFYTVVK 334

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
            +VFE +  +  DF  K  Y++     +R    ++L+++ + H + ++H D+KP N++ +
Sbjct: 109 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 163
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
             E+ K                         ++LID+G   F H  Q+++  V++R+++ 
Sbjct: 164 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 198
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
           PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG    +    
Sbjct: 199 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
              I  D R      R +R  W     S +                QH+   + + +D L
Sbjct: 259 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 300
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
             LLRYD   RL AREA+ HP+F   V+
Sbjct: 301 DKLLRYDHQSRLTAREAMEHPYFYTVVK 328

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
            +VFE +  +  DF  K  Y++     +R    ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
             E+ K                         ++LID+G   F H  Q+++  V++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
           PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG    +    
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
              I  D R      R +R  W     S +                QH+   + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
             LLRYD   RL AREA+ HP+F   V+
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVK 329

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
            +VFE +  +  DF  K  Y++     +R    ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
             E+ K                         ++LID+G   F H  Q+++  V++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
           PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG    +    
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
              I  D R      R +R  W     S +                QH+   + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
             LLRYD   RL AREA+ HP+F   V+
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYFYTVVK 329

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
            +VFE +  +  DF  K  Y++     +R    ++L+++ + H + ++H D+KP N++ +
Sbjct: 109 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 163
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
             E+ K                         ++LID+G   F H  Q+++  V++R+++ 
Sbjct: 164 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 198
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
           PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG    +    
Sbjct: 199 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
              I  D R      R +R  W     S +                QH+   + + +D L
Sbjct: 259 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 300
Query: 400 QGLLRYDPAERLKAREALRHPFFTRDVR 427
             LLRYD   RL AREA+ HP+F   V+
Sbjct: 301 DKLLRYDHQSRLTAREAMEHPYFYTVVK 328

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 57/263 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
            +VFE +  +  DF  K  Y++     +R    ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
             E+ K                         ++LID+G   F H  Q+++  V++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
           PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG    +    
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
              I  D R      R +R  W     S +                QH+   + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFF 422
             LLRYD   RL AREA+ HP+F
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 147/333 (44%), Gaps = 91/333 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+ C D    +  A+K++  R + +   +E+ + E+ +L++L   +I     
Sbjct: 34  LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI----- 88
Query: 156 VQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
            ++  +F+ + +  +V E   G  L+D +     R   +D  R + RQ+L  + + H+ +
Sbjct: 89  XKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVLSGITYXHKNK 146
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE-H 272
           ++H DLKPEN+LL S               SKD +          I++IDFG ST FE  
Sbjct: 147 IVHRDLKPENLLLES--------------KSKDAN----------IRIIDFGLSTHFEAS 182
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
           +     + T +Y APEV+ G  ++  CD+WS G IL  L SG   F              
Sbjct: 183 KKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF-------------- 227
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK---LLRLPNLIMQHVD 389
                                         +GA   D ++ V K      LP    + V 
Sbjct: 228 ------------------------------NGANEYDILKKVEKGKYTFELPQ--WKKVS 255
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
            SA DLI   +  L Y P+ R+ AR+AL H + 
Sbjct: 256 ESAKDLI---RKXLTYVPSXRISARDALDHEWI 285

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 151/365 (41%), Gaps = 60/365 (16%)
Query: 74  RPDDKDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           R    +  Y   IG++   +  R + L  +G G  G V   +D   +  VAIK + R   
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ VL +   H   IG       +   +    + IV E +  +L   ++ 
Sbjct: 63  NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   + +  L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
             G+ F   P+                      V TR+YRAPEVILG+G+    DLWSVG
Sbjct: 177 --GTSFMMEPE----------------------VVTRYYRAPEVILGMGYKENVDLWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
           CI+ E+   + LF   + ++    ++E++  P P  M      V        KY      
Sbjct: 213 CIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
             +PD     DS               +H    A    DLL  +L  D ++R+   EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
           HP+  
Sbjct: 318 HPYIN 322

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 82.0 bits (201), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 143/349 (40%), Gaps = 92/349 (26%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAIKI+     +I   REA        EI++L++L
Sbjct: 19  IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 78
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
               I     ++I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L 
Sbjct: 79  NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 131
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           +V ++HE  +IH DLKPEN+LL S E                        +   IK+ DF
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDF 167
Query: 266 GSTTF--EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQT 320
           G +    E      +  T  Y APEV++ +   G+N   D WS+G IL    SG   F  
Sbjct: 168 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 227
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
           H                   + ++    + KY                + +  VW     
Sbjct: 228 HRT----------------QVSLKDQITSGKY----------------NFIPEVW----- 250
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 428
                  V   A   +DL++ LL  DP  R    EALRHP+    D++R
Sbjct: 251 -----AEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 291

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 143/349 (40%), Gaps = 92/349 (26%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAIKI+     +I   REA        EI++L++L
Sbjct: 13  IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
               I     ++I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L 
Sbjct: 73  NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 125
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           +V ++HE  +IH DLKPEN+LL S E                        +   IK+ DF
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDF 161
Query: 266 GSTTF--EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQT 320
           G +    E      +  T  Y APEV++ +   G+N   D WS+G IL    SG   F  
Sbjct: 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
           H                   + ++    + KY                + +  VW     
Sbjct: 222 HRT----------------QVSLKDQITSGKY----------------NFIPEVW----- 244
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 428
                  V   A   +DL++ LL  DP  R    EALRHP+    D++R
Sbjct: 245 -----AEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 143/349 (40%), Gaps = 92/349 (26%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAIKI+     +I   REA        EI++L++L
Sbjct: 13  IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
               I     ++I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L 
Sbjct: 73  NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 125
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           +V ++HE  +IH DLKPEN+LL S E                        +   IK+ DF
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDF 161
Query: 266 GSTTF--EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQT 320
           G +    E      +  T  Y APEV++ +   G+N   D WS+G IL    SG   F  
Sbjct: 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
           H                   + ++    + KY                + +  VW     
Sbjct: 222 HRT----------------QVSLKDQITSGKY----------------NFIPEVW----- 244
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 428
                  V   A   +DL++ LL  DP  R    EALRHP+    D++R
Sbjct: 245 -----AEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 143/349 (40%), Gaps = 92/349 (26%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAIKI+     +I   REA        EI++L++L
Sbjct: 12  IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 71
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
               I     ++I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L 
Sbjct: 72  NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 124
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           +V ++HE  +IH DLKPEN+LL S E                        +   IK+ DF
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDF 160
Query: 266 GSTTF--EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQT 320
           G +    E      +  T  Y APEV++ +   G+N   D WS+G IL    SG   F  
Sbjct: 161 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 220
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
           H                   + ++    + KY                + +  VW     
Sbjct: 221 HRT----------------QVSLKDQITSGKY----------------NFIPEVW----- 243
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 428
                  V   A   +DL++ LL  DP  R    EALRHP+    D++R
Sbjct: 244 -----AEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 284

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 143/349 (40%), Gaps = 92/349 (26%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAIKI+     +I   REA        EI++L++L
Sbjct: 13  IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
               I     ++I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L 
Sbjct: 73  NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 125
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           +V ++HE  +IH DLKPEN+LL S E                        +   IK+ DF
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDF 161
Query: 266 GSTTF--EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQT 320
           G +    E      +  T  Y APEV++ +   G+N   D WS+G IL    SG   F  
Sbjct: 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
           H                   + ++    + KY                + +  VW     
Sbjct: 222 HRT----------------QVSLKDQITSGKY----------------NFIPEVW----- 244
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 428
                  V   A   +DL++ LL  DP  R    EALRHP+    D++R
Sbjct: 245 -----AEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 120/263 (45%), Gaps = 57/263 (21%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
            +VFE +  + +  LR+    +     +R    ++L+++ + H + ++H D+KP N++ +
Sbjct: 110 ALVFEHVNNTDFKQLRQ----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
             E+ K                         ++LID+G   F H  Q+++  V++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHH---- 340
           PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG    +    
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 341 -MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL 399
              I  D R      R +R  W     S +                QH+   + + +D L
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSEN----------------QHL--VSPEALDFL 301
Query: 400 QGLLRYDPAERLKAREALRHPFF 422
             LLRYD   RL AREA+ HP+F
Sbjct: 302 DKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 151/365 (41%), Gaps = 60/365 (16%)
Query: 74  RPDDKDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           R    +  Y   IG++   +  R + L  +G G  G V   +D   +  VAIK + R   
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ VL +   H   IG       +   +    + IV E +  +L   ++ 
Sbjct: 63  NQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ- 120
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   + +  L  Q+L  +  +H   +IH DLKP NI++ S   +K+ D+  L+R++
Sbjct: 121 ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-LARTA 176
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
             G+ F   P+                      V TR+YRAPEVILG+G+    D+WSVG
Sbjct: 177 --GTSFMMEPE----------------------VVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 306 CILVELCSGEALFQTHENLEHL-AMMERVLGPLPHHM------VIRADRRAEKYFRRGAR 358
           CI+ E+   + LF   + ++    ++E++  P P  M      V        KY      
Sbjct: 213 CIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFE 272
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
             +PD     DS               +H    A    DLL  +L  D ++R+   EAL+
Sbjct: 273 KLFPDVLFPADS---------------EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 419 HPFFT 423
           HP+  
Sbjct: 318 HPYIN 322

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
           F+Y N+    F+ L P+L D+             +R    +LL+++ + H   ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 336
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 337 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
           F+Y N+    F+ L P+L D+             +R    +LL+++ + H   ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 336
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 337 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
           F+Y N+    F+ L P+L D+             +R    +LL+++ + H   ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 336
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 337 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
           F+Y N+    F+ L P+L D+             +R    +LL+++ + H   ++H D+K
Sbjct: 128 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 173
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 174 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 207
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLG-- 335
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 208 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 267
Query: 336 ---PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 268 GLNAYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 309
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 310 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 341

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
           F+Y N+    F+ L P+L D+             +R    +LL+++ + H   ++H D+K
Sbjct: 108 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 153
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 154 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 187
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 336
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 188 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 247
Query: 337 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 248 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 289
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 290 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
           F+Y N+    F+ L P+L D+             +R    +LL+++ + H   ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 336
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 337 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
           F+Y N+    F+ L P+L D+             +R    +LL+++ + H   ++H D+K
Sbjct: 108 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 153
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 154 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 187
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 336
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 188 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 247
Query: 337 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 248 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 289
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 290 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
           F+Y N+    F+ L P+L D+             +R    +LL+++ + H   ++H D+K
Sbjct: 109 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 154
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 155 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 188
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 336
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 189 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 248
Query: 337 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 249 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 290
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 291 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 322

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
           F+Y N+    F+ L P+L D+             +R    +LL+++ + H   ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 336
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 337 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 67/272 (24%)
Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
           F+Y N+    F+ L P+L D+             +R    +LL+++ + H   ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVV 279
           P N+++         D++                    ++LID+G   F H  ++++  V
Sbjct: 153 PHNVMI---------DHEL-----------------RKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 280 STRHYRAPEVILGL-GWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGP- 336
           ++R+++ PE+++ L  ++Y  D+WS+GC+   +    E  F  H+N + L  + +VLG  
Sbjct: 187 ASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD 246
Query: 337 ----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                 +   I  D + E    R +R  W                L+  N   QH+   +
Sbjct: 247 GLNVYLNKYRIELDPQLEALVGRHSRKPW----------------LKFMNADNQHL--VS 288
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
            + ID L  LLRYD  ERL A EA+ HP+F +
Sbjct: 289 PEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 141/349 (40%), Gaps = 92/349 (26%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAI+I+     +I   REA        EI++L++L
Sbjct: 138 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL 197
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
               I     ++I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L 
Sbjct: 198 NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 250
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           +V ++HE  +IH DLKPEN+LL S E                        +   IK+ DF
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDF 286
Query: 266 GSTTF--EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQT 320
           G +    E      +  T  Y APEV++ +   G+N   D WS+G IL    SG   F  
Sbjct: 287 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
           H                   + ++    + KY                            
Sbjct: 347 HRT----------------QVSLKDQITSGKY---------------------------- 362
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 428
            N I +     +   +DL++ LL  DP  R    EALRHP+    D++R
Sbjct: 363 -NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 410

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 141/349 (40%), Gaps = 92/349 (26%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAI+I+     +I   REA        EI++L++L
Sbjct: 152 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL 211
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
               I     ++I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L 
Sbjct: 212 NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 264
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           +V ++HE  +IH DLKPEN+LL S E                        +   IK+ DF
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITDF 300
Query: 266 GSTTF--EHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQT 320
           G +    E      +  T  Y APEV++ +   G+N   D WS+G IL    SG   F  
Sbjct: 301 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 360
Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
           H                   + ++    + KY                            
Sbjct: 361 HRT----------------QVSLKDQITSGKY---------------------------- 376
Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT-RDVRR 428
            N I +     +   +DL++ LL  DP  R    EALRHP+    D++R
Sbjct: 377 -NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 424

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 148/356 (41%), Gaps = 70/356 (19%)
Query: 87  GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRL 145
           G +L  R   L  +G G  G V    DN+  + VAIK IV +  +  + A+ EI +++RL
Sbjct: 6   GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL 65
Query: 146 ARHDI---------GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLV 196
              +I          G++           N + IV E +   L + L +        +  
Sbjct: 66  DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLE---EHA 122
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
           R    QLL  + ++H   ++H DLKP N+ + + + V                       
Sbjct: 123 RLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLV----------------------- 159
Query: 257 SSAIKLIDFG-----STTFEHQDH-SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILV 309
              +K+ DFG        + H+ H S  + T+ YR+P ++L    +    D+W+ GCI  
Sbjct: 160 ---LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFA 216
Query: 310 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD 369
           E+ +G+ LF     LE    M+ +L  +P   V+  + R E        +        R+
Sbjct: 217 EMLTGKTLFAGAHELEQ---MQLILESIP---VVHEEDRQELLSVIPVYI--------RN 262
Query: 370 SMRAVWKLLR--LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
            M    K L   LP +        + + +D L+ +L + P +RL A EAL HP+ +
Sbjct: 263 DMTEPHKPLTQLLPGI--------SREAVDFLEQILTFSPMDRLTAEEALSHPYMS 310

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/336 (21%), Positives = 136/336 (40%), Gaps = 85/336 (25%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGG 152
           IL ++G G FG V  C +     +   K + +   ++KY      EI ++ +L       
Sbjct: 55  ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQLHH----- 107
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
            + + + + F+ +  + ++ E L G  L+D +    Y+    +++  + RQ  E +  MH
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM-RQACEGLKHMH 166
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
           E  ++H D+KPENI+  +                          K+S++K+IDFG  T  
Sbjct: 167 EHSIVHLDIKPENIMCETK-------------------------KASSVKIIDFGLATKL 201
Query: 272 HQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
           + D       +T  + APE++      +  D+W++G +   L SG + F   ++LE L  
Sbjct: 202 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQN 261
Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
           ++R                           DW       D+  +V               
Sbjct: 262 VKRC--------------------------DW---EFDEDAFSSV--------------- 277
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
             + +  D ++ LL+ +P +RL   +AL HP+   D
Sbjct: 278 --SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD 311

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 87/345 (25%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQ 143
           + L+ R + + K+G G +G+V+ C D       AIKI++    +      A + E+ VL+
Sbjct: 17  QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 144 RLARHDIGGTRCVQIRNWF-DYRNHICIVFEKLGPSLYD-FLRKNSYRSFPIDLVRELGR 201
           +L   +I     +++  +F D RN+  ++    G  L+D  + +  +      ++    +
Sbjct: 77  QLDHPNI-----MKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM---K 128
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+L    ++H+  ++H DLKPEN+LL S               S+D          + IK
Sbjct: 129 QVLSGTTYLHKHNIVHRDLKPENLLLES--------------KSRD----------ALIK 164
Query: 262 LIDFG-STTFE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
           ++DFG S  FE        + T +Y APEV L   ++  CD+WS G IL  L  G   F 
Sbjct: 165 IVDFGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFG 223
Query: 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379
              + E L  +E+  G                        D PD     D  + + KL  
Sbjct: 224 GQTDQEILKRVEK--GKFS--------------------FDPPDWTQVSDEAKQLVKL-- 259
Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
                                 +L Y+P++R+ A EAL HP+  +
Sbjct: 260 ----------------------MLTYEPSKRISAEEALNHPWIVK 282

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 78.2 bits (191), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 141/336 (41%), Gaps = 88/336 (26%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++ S++G G    V  C     ++  A+K+++     ++    EI VL RL+  +I    
Sbjct: 56  EVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-KKIVRTEIGVLLRLSHPNI---- 110
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSF--PIDLVRELGRQLLESVAFMH 211
            ++++  F+    I +V E + G  L+D + +  Y S     D V+    Q+LE+VA++H
Sbjct: 111 -IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK----QILEAVAYLH 165
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF 270
           E  ++H DLKPEN+L  +      PD                    + +K+ DFG S   
Sbjct: 166 ENGIVHRDLKPENLLYATP----APD--------------------APLKIADFGLSKIV 201
Query: 271 EHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLA 328
           EHQ     V  T  Y APE++ G  +    D+WSVG I  + LC  E  +          
Sbjct: 202 EHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFY---------- 251
Query: 329 MMERVLGPLPHHMVIRADRRAEKY-FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
                            D R +++ FRR    ++                      I   
Sbjct: 252 -----------------DERGDQFMFRRILNCEY--------------------YFISPW 274
Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
            D  + +  DL++ L+  DP +RL   +AL+HP+ T
Sbjct: 275 WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVT 310

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 147/362 (40%), Gaps = 94/362 (25%)
Query: 90  LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRL 145
           L+ R + + K+G G +G+V+ C D       AIKI++    +      A + E+ VL++L
Sbjct: 2   LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 146 ARHDIGGTRCVQIRNWF-DYRNHICIVFEKLGPSLYD-FLRKNSYRSFPIDLVRELGRQL 203
              +I     +++  +F D RN+  ++    G  L+D  + +  +      ++    +Q+
Sbjct: 62  DHPNI-----MKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM---KQV 113
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
           L    ++H+  ++H DLKPEN+LL S                          + + IK++
Sbjct: 114 LSGTTYLHKHNIVHRDLKPENLLLESK------------------------SRDALIKIV 149
Query: 264 DFG-STTFE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
           DFG S  FE        + T +Y APEV L   ++  CD+WS G IL  L  G   F   
Sbjct: 150 DFGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGGQ 208
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
            + E L  +E+  G                        D PD     D  + + KL    
Sbjct: 209 TDQEILKRVEK--GKFS--------------------FDPPDWTQVSDEAKQLVKL---- 242
Query: 382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR-------DVRRPTLLVA 434
                               +L Y+P++R+ A EAL HP+  +       DV +  L  A
Sbjct: 243 --------------------MLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHALTGA 282
Query: 435 TG 436
            G
Sbjct: 283 LG 284

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/344 (22%), Positives = 137/344 (39%), Gaps = 88/344 (25%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDIGGT 153
           +I+ ++G+G FG+V +  + E   L A K++ + ++   E  M+EID+L      +I   
Sbjct: 40  EIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI--- 96
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ + F Y N++ I+ E       D +     R      ++ + +Q L+++ ++H+ 
Sbjct: 97  --VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TF 270
           ++IH DLK  NIL                  + DG           IKL DFG +   T 
Sbjct: 155 KIIHRDLKAGNILF-----------------TLDGD----------IKLADFGVSAKNTR 187
Query: 271 EHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALFQTHENLE 325
             Q     + T ++ APEV++        ++Y  D+WS+G  L+E+   E          
Sbjct: 188 XIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP--------- 238
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
                       PHH +                          + MR + K+ +     +
Sbjct: 239 ------------PHHEL--------------------------NPMRVLLKIAKSEPPTL 260
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
                 + +  D L+  L  +   R    + L+HPF T D  +P
Sbjct: 261 AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/344 (22%), Positives = 137/344 (39%), Gaps = 88/344 (25%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDIGGT 153
           +I+ ++G+G FG+V +  + E   L A K++ + ++   E  M+EID+L      +I   
Sbjct: 40  EIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI--- 96
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ + F Y N++ I+ E       D +     R      ++ + +Q L+++ ++H+ 
Sbjct: 97  --VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TF 270
           ++IH DLK  NIL                  + DG           IKL DFG +   T 
Sbjct: 155 KIIHRDLKAGNILF-----------------TLDGD----------IKLADFGVSAKNTR 187
Query: 271 EHQDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
             Q     + T ++ APEV++        ++Y  D+WS+G  L+E+   E          
Sbjct: 188 XIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP--------- 238
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
                       PHH +                          + MR + K+ +     +
Sbjct: 239 ------------PHHEL--------------------------NPMRVLLKIAKSEPPTL 260
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
                 + +  D L+  L  +   R    + L+HPF T D  +P
Sbjct: 261 AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/344 (22%), Positives = 137/344 (39%), Gaps = 88/344 (25%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDIGGT 153
           +I+ ++G+G FG+V +  + E   L A K++ + ++   E  M+EID+L      +I   
Sbjct: 40  EIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI--- 96
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ + F Y N++ I+ E       D +     R      ++ + +Q L+++ ++H+ 
Sbjct: 97  --VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TF 270
           ++IH DLK  NIL                  + DG           IKL DFG +   T 
Sbjct: 155 KIIHRDLKAGNILF-----------------TLDGD----------IKLADFGVSAKNTR 187
Query: 271 EHQDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
             Q     + T ++ APEV++        ++Y  D+WS+G  L+E+   E          
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP--------- 238
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
                       PHH +                          + MR + K+ +     +
Sbjct: 239 ------------PHHEL--------------------------NPMRVLLKIAKSEPPTL 260
Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
                 + +  D L+  L  +   R    + L+HPF T D  +P
Sbjct: 261 AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 49/259 (18%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
            +VFE +  +  DF  K  Y+      +R    +LL+++ + H   ++H D+KP N+++ 
Sbjct: 116 ALVFEYINNT--DF--KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 171
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
                                      +   ++LID+G   F H  Q+++  V++R+++ 
Sbjct: 172 H--------------------------QQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG 205
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHHMVIR 344
           PE+++    ++Y  D+WS+GC+L  +    E  F   +N + L  + +VLG    +  ++
Sbjct: 206 PELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLK 265
Query: 345 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG-DLIDLLQGLL 403
                    +    LD           R  W+     N I     H    + +DLL  LL
Sbjct: 266 ---------KYHIDLDPHFNDILGQHSRKRWE-----NFIHSENRHLVSPEALDLLDKLL 311
Query: 404 RYDPAERLKAREALRHPFF 422
           RYD  +RL A+EA+ HP+F
Sbjct: 312 RYDHQQRLTAKEAMEHPYF 330

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 49/259 (18%)
Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
            +VFE +  +  DF  K  Y+      +R    +LL+++ + H   ++H D+KP N+++ 
Sbjct: 111 ALVFEYINNT--DF--KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 166
Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRA 286
                                      +   ++LID+G   F H  Q+++  V++R+++ 
Sbjct: 167 H--------------------------QQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG 200
Query: 287 PEVILGLG-WNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHHMVIR 344
           PE+++    ++Y  D+WS+GC+L  +    E  F   +N + L  + +VLG    +  ++
Sbjct: 201 PELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLK 260
Query: 345 ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG-DLIDLLQGLL 403
                    +    LD           R  W+     N I     H    + +DLL  LL
Sbjct: 261 ---------KYHIDLDPHFNDILGQHSRKRWE-----NFIHSENRHLVSPEALDLLDKLL 306
Query: 404 RYDPAERLKAREALRHPFF 422
           RYD  +RL A+EA+ HP+F
Sbjct: 307 RYDHQQRLTAKEAMEHPYF 325

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 143/364 (39%), Gaps = 98/364 (26%)
Query: 80  GHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV----------RSIN 129
            H      EN  P+      +G G    V  C      +  A+KI+            + 
Sbjct: 9   SHSTHGFYENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ 64
Query: 130 KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSY 188
           + REA + E+D+L++++ H       +Q+++ ++      +VF+ +    L+D+L +   
Sbjct: 65  ELREATLKEVDILRKVSGH----PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV- 119
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
            +      R++ R LLE +  +H+L ++H DLKPENILL     +K+ D+ F  +     
Sbjct: 120 -TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ----- 173
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI-LGLGWNYP-----CDLW 302
                         +D G    E      V  T  Y APE+I   +  N+P      D+W
Sbjct: 174 --------------LDPGEKLRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMW 213
Query: 303 SVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP 362
           S G I+  L +G   F   + +  L M+                      ++ G+  +W 
Sbjct: 214 STGVIMYTLLAGSPPFWHRKQMLMLRMI------------------MSGNYQFGSP-EWD 254
Query: 363 DGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           D +   D+++                        DL+   L   P +R  A EAL HPFF
Sbjct: 255 DYS---DTVK------------------------DLVSRFLVVQPQKRYTAEEALAHPFF 287
Query: 423 TRDV 426
            + V
Sbjct: 288 QQYV 291

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 153/373 (41%), Gaps = 71/373 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMI--EIDVLQRLARHDIGGTRCV 156
           +G G++G V   +D    + VAIK V R      +   I  EI +L RL    I     +
Sbjct: 36  IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDL 95
Query: 157 QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDL----VRELGRQLLESVAFMHE 212
            I       + + IV E     L    +       PI L    V+ +   LL    F+HE
Sbjct: 96  IIPEDLLKFDELYIVLEIADSDLKKLFKT------PIFLTEQHVKTILYNLLLGEKFIHE 149
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSR---SSKDGSYFKNLPKSSAIKLIDFGSTT 269
             +IH DLKP N LL     VK+ D+  L+R   S KD     +L +    +     +  
Sbjct: 150 SGIIHRDLKPANCLLNQDCSVKICDFG-LARTINSDKDIHIVNDLEEKEENEEPGPHNKN 208
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCS-------------- 313
            + Q  S+VV TR YRAPE+IL L  NY    D+WS GCI  EL +              
Sbjct: 209 LKKQLTSHVV-TRWYRAPELIL-LQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFP 266
Query: 314 ---GEALF---------QTHE--NLEHLAMMERVLGPLPHH-MVIRADRRAEKYFRRGAR 358
              G + F         + HE  N + L ++  V+G  P   +     +   KY +    
Sbjct: 267 LFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPT 326
Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
            D  D +    S+                    + + IDLL+ +LR++  +R+   +AL 
Sbjct: 327 RDGIDLSKKYSSI--------------------SKEGIDLLESMLRFNAQKRITIDKALS 366
Query: 419 HPFFTRDVRRPTL 431
           HP+  +DVR+  L
Sbjct: 367 HPYL-KDVRKENL 378

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARHDIG 151
           +I+  +GEG+FG+V   +     + VA+KI+  + + K      IE ++   RL RH   
Sbjct: 11  QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH--- 67
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               +++ +    ++ I +V E  G  L+D++ +    S      R   +Q++ +V + H
Sbjct: 68  -PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVEYCH 124
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
             +++H DLKPEN+LL     VK+ D+  LS    DG++ K                   
Sbjct: 125 RHKIVHRDLKPENLLLDEHLNVKIADFG-LSNIMTDGNFLKT------------------ 165
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCIL-VELC 312
                    + +Y APEVI G  +  P  D+WS G IL V LC
Sbjct: 166 ------SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 202

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARHDIG 151
           +I+  +GEG+FG+V   +     + VA+KI+  + + K      IE ++   RL RH   
Sbjct: 17  QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH--- 73
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               +++ +    ++ I +V E  G  L+D++ +    S      R   +Q++ +V + H
Sbjct: 74  -PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVEYCH 130
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
             +++H DLKPEN+LL     VK+ D+  LS    DG++ K                   
Sbjct: 131 RHKIVHRDLKPENLLLDEHLNVKIADFG-LSNIMTDGNFLKT------------------ 171
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCIL-VELC 312
                    + +Y APEVI G  +  P  D+WS G IL V LC
Sbjct: 172 ------SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 208

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARHDIG 151
           +I+  +GEG+FG+V   +     + VA+KI+  + + K      IE ++   RL RH   
Sbjct: 16  QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH--- 72
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               +++ +    ++ I +V E  G  L+D++ +    S      R   +Q++ +V + H
Sbjct: 73  -PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVEYCH 129
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
             +++H DLKPEN+LL     VK+ D+  LS    DG++ K                   
Sbjct: 130 RHKIVHRDLKPENLLLDEHLNVKIADFG-LSNIMTDGNFLKT------------------ 170
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCIL-VELC 312
                    + +Y APEVI G  +  P  D+WS G IL V LC
Sbjct: 171 ------SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 207

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARHDIG 151
           +I+  +GEG+FG+V   +     + VA+KI+  + + K      IE ++   RL RH   
Sbjct: 7   QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH--- 63
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               +++ +    ++ I +V E  G  L+D++ +    S      R   +Q++ +V + H
Sbjct: 64  -PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVEYCH 120
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
             +++H DLKPEN+LL     VK+ D+  LS    DG++ K                   
Sbjct: 121 RHKIVHRDLKPENLLLDEHLNVKIADFG-LSNIMTDGNFLKT------------------ 161
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCIL-VELC 312
                    + +Y APEVI G  +  P  D+WS G IL V LC
Sbjct: 162 ------SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 198

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 141/354 (39%), Gaps = 98/354 (27%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV----------RSINKYREAAMI 137
           EN  P+      +G G    V  C      +  A+KI+            + + REA + 
Sbjct: 4   ENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 59
Query: 138 EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLV 196
           E+D+L++++ H       +Q+++ ++      +VF+ +    L+D+L +    +      
Sbjct: 60  EVDILRKVSGH----PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKET 113
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
           R++ R LLE +  +H+L ++H DLKPENILL     +K+ D+ F  +             
Sbjct: 114 RKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ------------- 160
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI-LGLGWNYP-----CDLWSVGCILVE 310
                 +D G    E      V  T  Y APE+I   +  N+P      D+WS G I+  
Sbjct: 161 ------LDPGEKLRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 208
Query: 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 370
           L +G   F   + +  L M+                      ++ G+  +W D +   D+
Sbjct: 209 LLAGSPPFWHRKQMLMLRMI------------------MSGNYQFGSP-EWDDYS---DT 246
Query: 371 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
           ++                        DL+   L   P +R  A EAL HPFF +
Sbjct: 247 VK------------------------DLVSRFLVVQPQKRYTAEEALAHPFFQQ 276

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/364 (22%), Positives = 143/364 (39%), Gaps = 98/364 (26%)
Query: 80  GHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV----------RSIN 129
            H      EN  P+      +G G    V  C      +  A+KI+            + 
Sbjct: 9   SHSTHGFYENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ 64
Query: 130 KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSY 188
           + REA + E+D+L++++ H       +Q+++ ++      +VF+ +    L+D+L +   
Sbjct: 65  ELREATLKEVDILRKVSGH----PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV- 119
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
            +      R++ R LLE +  +H+L ++H DLKPENILL     +K+ D+ F  +     
Sbjct: 120 -TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ----- 173
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI-LGLGWNYP-----CDLW 302
                         +D G      +    V  T  Y APE+I   +  N+P      D+W
Sbjct: 174 --------------LDPG------EKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMW 213
Query: 303 SVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP 362
           S G I+  L +G   F   + +  L M+                      ++ G+  +W 
Sbjct: 214 STGVIMYTLLAGSPPFWHRKQMLMLRMI------------------MSGNYQFGSP-EWD 254
Query: 363 DGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           D +   D+++                        DL+   L   P +R  A EAL HPFF
Sbjct: 255 DYS---DTVK------------------------DLVSRFLVVQPQKRYTAEEALAHPFF 287
Query: 423 TRDV 426
            + V
Sbjct: 288 QQYV 291

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 47/250 (18%)
Query: 190 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249
             P  +V+ L  Q+L+ + ++H   ++H DLKP NIL++                     
Sbjct: 124 QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG------------------ 165
Query: 250 YFKNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILGL-GWNYPCDLW 302
                P+   +K+ D G     +       D   VV T  YRAPE++LG   +    D+W
Sbjct: 166 -----PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIW 220
Query: 303 SVGCILVELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRG 356
           ++GCI  EL + E +F   +      N  H   ++R+       M   AD+  E   +  
Sbjct: 221 AIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV----MGFPADKDWEDIKKM- 275
Query: 357 ARLDWPDGAT-SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE 415
                P+ +T  +D  R  +    L   + +H          LLQ LL  DP +R+ + +
Sbjct: 276 -----PEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330
Query: 416 ALRHPFFTRD 425
           A++ P+F  D
Sbjct: 331 AMQDPYFLED 340

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 135/344 (39%), Gaps = 85/344 (24%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
           E++   C+++   G+G F  V  C + E  +  A+KIV  + K+  +  +  + L+R A 
Sbjct: 23  EDVYELCEVI---GKGAFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREAS 78
Query: 148 --HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQ 202
             H +     V++   +     + +VFE + G  L   + K +   F     +     RQ
Sbjct: 79  ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +LE++ + H+  +IH D+KPEN+LL S E                         S+ +KL
Sbjct: 139 ILEALRYCHDNNIIHRDVKPENVLLASKE------------------------NSAPVKL 174
Query: 263 IDFGSTTFEHQDHSYV----VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
            DFG    +  +   V    V T H+ APEV+    +  P D+W  G IL  L S     
Sbjct: 175 GDFG-VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS----- 228
Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
                           G LP +                       G   R     +    
Sbjct: 229 ----------------GCLPFY-----------------------GTKERLFEGIIKGKY 249
Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           ++      H+  SA DL+   + +L  DPAER+   EAL HP+ 
Sbjct: 250 KMNPRQWSHISESAKDLV---RRMLMLDPAERITVYEALNHPWL 290

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 43/226 (19%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-----EAAMIEIDVLQRLARHDIGGT 153
           K+G G FG V      E++     +++++INK R     E    EI+VL+ L   +I   
Sbjct: 29  KLGSGAFGDVHLV---EERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI--- 82
Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVAFM 210
             ++I   F+  +++ IV E   G  L + +     R   +    V EL +Q++ ++A+ 
Sbjct: 83  --IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 269
           H   ++H DLKPENIL                        F++    S IK+IDFG +  
Sbjct: 141 HSQHVVHKDLKPENIL------------------------FQDTSPHSPIKIIDFGLAEL 176
Query: 270 FEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           F+  +HS     T  Y APEV       + CD+WS G ++  L +G
Sbjct: 177 FKSDEHSTNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTG 221

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 32/221 (14%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
           +L K+GEG++G V +    E  ++VAIK V   +  +E  + EI ++Q+           
Sbjct: 33  VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI-IKEISIMQQC-----DSPHV 86
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V+    +     + IV E  G  S+ D +R  + ++   D +  + +  L+ + ++H +R
Sbjct: 87  VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
            IH D+K  NILL +  + K+ D+                           G  T     
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVA------------------------GQLTDXMAK 181
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
            + V+ T  + APEVI  +G+N   D+WS+G   +E+  G+
Sbjct: 182 RNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 120/297 (40%), Gaps = 52/297 (17%)
Query: 69  GSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI 128
           G   +R +D + HY   +GE L          G G F  V +C      +  A K ++  
Sbjct: 1   GMSTFRQEDVEDHY--EMGEEL----------GSGQFAIVRKCRQKGTGKEYAAKFIKKR 48
Query: 129 -------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLY 180
                     RE    E+++L+ + RH       + + + F+ +  + ++ E + G  L+
Sbjct: 49  RLSSSRRGVSREEIEREVNILREI-RH----PNIITLHDIFENKTDVVLILELVSGGELF 103
Query: 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240
           DFL +    S   D   +  +Q+L+ V ++H  R+ H DLKPENI+L+            
Sbjct: 104 DFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLD----------- 150
Query: 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYP 298
                      KN+P +  IKLIDFG        + +  +  T  + APE++        
Sbjct: 151 -----------KNVP-NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 299 CDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 355
            D+WS+G I   L SG + F      E L  +  V               A+ + RR
Sbjct: 199 ADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 255

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 46/301 (15%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+        ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
            + F      E LA +  V               A+ + RR    D     T +DS++  
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
           W
Sbjct: 274 W 274

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 46/301 (15%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+        ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 66  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 118
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK   
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 155
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L SG
Sbjct: 156 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
            + F      E LA +  V               A+ + RR    D     T +DS++  
Sbjct: 213 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 272
Query: 375 W 375
           W
Sbjct: 273 W 273

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 46/301 (15%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+        ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 66  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 118
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK   
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 155
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L SG
Sbjct: 156 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
            + F      E LA +  V               A+ + RR    D     T +DS++  
Sbjct: 213 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 272
Query: 375 W 375
           W
Sbjct: 273 W 273

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 46/301 (15%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+        ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
            + F      E LA +  V               A+ + RR    D     T +DS++  
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
           W
Sbjct: 274 W 274

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 46/301 (15%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+        ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
            + F      E LA +  V               A+ + RR    D     T +DS++  
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
           W
Sbjct: 274 W 274

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 46/301 (15%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+        ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
            + F      E LA +  V               A+ + RR    D     T +DS++  
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
           W
Sbjct: 274 W 274

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 46/301 (15%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+        ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
            + F      E LA +  V               A+ + RR    D     T +DS++  
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
           W
Sbjct: 274 W 274

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 46/301 (15%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+        ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
            + F      E LA +  V               A+ + RR    D     T +DS++  
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
           W
Sbjct: 274 W 274

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 46/301 (15%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+        ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
            + F      E LA +  V               A+ + RR    D     T +DS++  
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
           W
Sbjct: 274 W 274

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 46/301 (15%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+        ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
            + F      E LA +  V               A+ + RR    D     T +DS++  
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
           W
Sbjct: 274 W 274

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 46/301 (15%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+        ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
            + F      E LA +  V               A+ + RR    D     T +DS++  
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
           W
Sbjct: 274 W 274

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 108/253 (42%), Gaps = 44/253 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHDIGG 152
           L  +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH    
Sbjct: 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPF-- 209
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
                ++  F   + +C V E   G  L+  L +   R F  D  R  G +++ ++ ++H
Sbjct: 210 --LTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLH 265
Query: 212 -ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
            E  +++ DLK EN++L    ++K+ D+       KDG+  K                  
Sbjct: 266 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF---------------- 309
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLA 328
                     T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L 
Sbjct: 310 --------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 361
Query: 329 MME-----RVLGP 336
           +ME     R LGP
Sbjct: 362 LMEEIRFPRTLGP 374

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 108/253 (42%), Gaps = 44/253 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHDIGG 152
           L  +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH    
Sbjct: 156 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPF-- 212
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
                ++  F   + +C V E   G  L+  L +   R F  D  R  G +++ ++ ++H
Sbjct: 213 --LTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLH 268
Query: 212 -ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
            E  +++ DLK EN++L    ++K+ D+       KDG+  K                  
Sbjct: 269 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF---------------- 312
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLA 328
                     T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L 
Sbjct: 313 --------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 364
Query: 329 MME-----RVLGP 336
           +ME     R LGP
Sbjct: 365 LMEEIRFPRTLGP 377

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 46/301 (15%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+        ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
            + F      E LA +  V               A+ + RR    D     T +DS++  
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
           W
Sbjct: 274 W 274

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/363 (22%), Positives = 139/363 (38%), Gaps = 92/363 (25%)
Query: 69  GSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV--R 126
            S  W+   +D   +F   E L          G G F +VV   +    +L A+K +  +
Sbjct: 9   SSSSWKKQAEDIKKIFEFKETL----------GTGAFSEVVLAEEKATGKLFAVKCIPKK 58
Query: 127 SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRK 185
           ++     +   EI VL+++   +I     V + + ++  NH+ +V + + G  L+D + +
Sbjct: 59  ALKGKESSIENEIAVLRKIKHENI-----VALEDIYESPNHLYLVMQLVSGGELFDRIVE 113
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
             +  +       L RQ+L++V ++H + ++H DLKPEN+L  S +              
Sbjct: 114 KGF--YTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQD-------------- 157
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWS 303
                     + S I + DFG +  E +    S    T  Y APEV+    ++   D WS
Sbjct: 158 ----------EESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWS 207
Query: 304 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 363
           +G I   L  G   F    + +   + E++L             +AE  F      D  D
Sbjct: 208 IGVIAYILLCGYPPFYDENDSK---LFEQIL-------------KAEYEFDSPYWDDISD 251
Query: 364 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
            A                               D ++ L+  DP +R    +A RHP+  
Sbjct: 252 SAK------------------------------DFIRNLMEKDPNKRYTCEQAARHPWIA 281
Query: 424 RDV 426
            D 
Sbjct: 282 GDT 284

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 108/253 (42%), Gaps = 44/253 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHDIGG 152
           L  +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH    
Sbjct: 14  LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPF-- 70
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
                ++  F   + +C V E   G  L+  L +   R F  D  R  G +++ ++ ++H
Sbjct: 71  --LTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLH 126
Query: 212 -ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
            E  +++ DLK EN++L    ++K+ D+       KDG+  K                  
Sbjct: 127 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF---------------- 170
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLA 328
                     T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L 
Sbjct: 171 --------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 222
Query: 329 MME-----RVLGP 336
           +ME     R LGP
Sbjct: 223 LMEEIRFPRTLGP 235

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 108/253 (42%), Gaps = 44/253 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHDIGG 152
           L  +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH    
Sbjct: 15  LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPF-- 71
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
                ++  F   + +C V E   G  L+  L +   R F  D  R  G +++ ++ ++H
Sbjct: 72  --LTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLH 127
Query: 212 -ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
            E  +++ DLK EN++L    ++K+ D+       KDG+  K                  
Sbjct: 128 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF---------------- 171
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLA 328
                     T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L 
Sbjct: 172 --------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 223
Query: 329 MME-----RVLGP 336
           +ME     R LGP
Sbjct: 224 LMEEIRFPRTLGP 236

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/336 (21%), Positives = 134/336 (39%), Gaps = 58/336 (17%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----------EIDVLQRLARH 148
           +  G++G V    D+E   +   ++  +++  R   ++           EI +L      
Sbjct: 30  ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           +I G R + +       + + +V E +   L   +        P   ++     +L  + 
Sbjct: 90  NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP-QHIQYFMYHILLGLH 148
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
            +HE  ++H DL P NILL     + + D+      + D                     
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA-------------------- 188
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                + ++ V+ R YRAPE+++   G+    D+WS GC++ E+ + +ALF+       L
Sbjct: 189 -----NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 328 AMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
             +  V+G P    +V+ +   A  Y R          + S    RA W        ++ 
Sbjct: 244 NKIVEVVGTPKIEDVVMFSSPSARDYLR---------NSLSNVPARA-W------TAVVP 287
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             D  A   +DL+  +L ++P  R+   +ALRHP+F
Sbjct: 288 TADPVA---LDLIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/336 (21%), Positives = 134/336 (39%), Gaps = 58/336 (17%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----------EIDVLQRLARH 148
           +  G++G V    D+E   +   ++  +++  R   ++           EI +L      
Sbjct: 30  ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           +I G R + +       + + +V E +   L   +        P   ++     +L  + 
Sbjct: 90  NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP-QHIQYFMYHILLGLH 148
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
            +HE  ++H DL P NILL     + + D+      + D                     
Sbjct: 149 VLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA-------------------- 188
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                + ++ V+ R YRAPE+++   G+    D+WS GC++ E+ + +ALF+       L
Sbjct: 189 -----NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 328 AMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
             +  V+G P    +V+ +   A  Y R          + S    RA W        ++ 
Sbjct: 244 NKIVEVVGTPKIEDVVMFSSPSARDYLR---------NSLSNVPARA-W------TAVVP 287
Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             D  A   +DL+  +L ++P  R+   +ALRHP+F
Sbjct: 288 TADPVA---LDLIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 134/343 (39%), Gaps = 80/343 (23%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G  G+V+ECF     +  A+K++    K R+    E+D   + +    GG   V I 
Sbjct: 37  LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVDHHWQAS----GGPHIVCIL 88
Query: 160 NWFDYRNH----ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           + ++  +H    + I+ E + G  L+  +++   ++F      E+ R +  ++ F+H   
Sbjct: 89  DVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN 148
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           + H D+KPEN+L  S E                        K + +KL DFG      Q+
Sbjct: 149 IAHRDVKPENLLYTSKE------------------------KDAVLKLTDFGFAKETTQN 184
Query: 275 HSYV-VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 333
                  T +Y APEV+    ++  CD+WS+G I+  L  G   F ++        M+R 
Sbjct: 185 ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR 244
Query: 334 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 393
           +             R  +Y                            PN     V   A 
Sbjct: 245 I-------------RLGQY--------------------------GFPNPEWSEVSEDAK 265
Query: 394 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
            LI L   LL+ DP ERL   + + HP+  + +  P   + T 
Sbjct: 266 QLIRL---LLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 305

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 46/301 (15%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+        ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
            + F      E LA +  V               A+ + RR    D     T +DS++  
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
           W
Sbjct: 274 W 274

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 122/292 (41%), Gaps = 44/292 (15%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLARH 148
           I  ++G G F  V +C +       A K ++            RE    E+ +L+++  H
Sbjct: 16  IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           ++     + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+ V
Sbjct: 76  NV-----ITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGV 128
Query: 208 AFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
            ++H  ++ H DLKPENI+L+       ++K+ D+  L+   +DG  FKN+         
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI--------- 178
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
            FG              T  + APE++         D+WS+G I   L SG + F     
Sbjct: 179 -FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
            E LA +  V               A+ + R+    +     T ++++R  W
Sbjct: 224 QETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 134/343 (39%), Gaps = 80/343 (23%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G  G+V+ECF     +  A+K++    K R+    E+D   + +    GG   V I 
Sbjct: 18  LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVDHHWQAS----GGPHIVCIL 69
Query: 160 NWFDYRNH----ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           + ++  +H    + I+ E + G  L+  +++   ++F      E+ R +  ++ F+H   
Sbjct: 70  DVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN 129
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           + H D+KPEN+L  S E                        K + +KL DFG      Q+
Sbjct: 130 IAHRDVKPENLLYTSKE------------------------KDAVLKLTDFGFAKETTQN 165
Query: 275 HSYV-VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 333
                  T +Y APEV+    ++  CD+WS+G I+  L  G   F ++        M+R 
Sbjct: 166 ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR 225
Query: 334 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 393
           +             R  +Y                            PN     V   A 
Sbjct: 226 I-------------RLGQY--------------------------GFPNPEWSEVSEDAK 246
Query: 394 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVATG 436
            LI L   LL+ DP ERL   + + HP+  + +  P   + T 
Sbjct: 247 QLIRL---LLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 286

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 108/253 (42%), Gaps = 44/253 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHDIGG 152
           L  +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH    
Sbjct: 13  LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPF-- 69
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
                ++  F   + +C V E   G  L+  L +   R F  D  R  G +++ ++ ++H
Sbjct: 70  --LTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLH 125
Query: 212 -ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
            E  +++ DLK EN++L    ++K+ D+       KDG+  K                  
Sbjct: 126 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF---------------- 169
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLA 328
                     T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L 
Sbjct: 170 --------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 221
Query: 329 MME-----RVLGP 336
           +ME     R LGP
Sbjct: 222 LMEEIRFPRTLGP 234

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 123/292 (42%), Gaps = 44/292 (15%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLARH 148
           I  ++G G F  V +C +       A K ++            RE    E+ +L+++  H
Sbjct: 16  IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           ++     + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+ V
Sbjct: 76  NV-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGV 128
Query: 208 AFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
            ++H  ++ H DLKPENI+L+       ++K+ D+  L+   +DG  FKN+         
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI--------- 178
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
            FG              T  + APE++         D+WS+G I   L SG + F     
Sbjct: 179 -FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
            E LA +  V          +    A+ + R+    +     T ++++R  W
Sbjct: 224 QETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 123/292 (42%), Gaps = 44/292 (15%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLARH 148
           I  ++G G F  V +C +       A K ++            RE    E+ +L+++  H
Sbjct: 16  IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           ++     + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+ V
Sbjct: 76  NV-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGV 128
Query: 208 AFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
            ++H  ++ H DLKPENI+L+       ++K+ D+  L+   +DG  FKN+         
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI--------- 178
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
            FG              T  + APE++         D+WS+G I   L SG + F     
Sbjct: 179 -FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
            E LA +  V          +    A+ + R+    +     T ++++R  W
Sbjct: 224 QETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 136/335 (40%), Gaps = 88/335 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAM-IEIDVLQRLARHDIGGTRCVQ 157
           +G G F +V+   D   ++LVAIK I +   + +E +M  EI VL ++   +I     V 
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNI-----VA 80
Query: 158 IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGR---QLLESVAFMHEL 213
           + + ++   H+ ++ + + G  L+D + +  + +      R+  R   Q+L++V ++H+L
Sbjct: 81  LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLIFQVLDAVKYLHDL 135
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
            ++H DLKPEN+L                        + +L + S I + DFG +  E  
Sbjct: 136 GIVHRDLKPENLL------------------------YYSLDEDSKIMISDFGLSKMEDP 171
Query: 274 DH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
               S    T  Y APEV+    ++   D WS+G I   L  G   F    + +   + E
Sbjct: 172 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK---LFE 228
Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
           ++L             +AE  F      D  D A                          
Sbjct: 229 QIL-------------KAEYEFDSPYWDDISDSAK------------------------- 250
Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 426
                D ++ L+  DP +R    +AL+HP+   D 
Sbjct: 251 -----DFIRHLMEKDPEKRFTCEQALQHPWIAGDT 280

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 46/301 (15%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+        ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L  V ++H L++ H DLKPENI+L+                       +N+PK   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 260 IKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           IK+IDFG     H+     +   +  T  + APE++         D+WS+G I   L SG
Sbjct: 157 IKIIDFG---LAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
            + F      E LA +  V               A+ + RR    D     T +DS++  
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 375 W 375
           W
Sbjct: 274 W 274

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 41/225 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIG--- 151
           L ++G+G+FG+V +  DN  KE+VAIKI+         E    EI VL +     I    
Sbjct: 24  LDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           G+     + W        I+ E L G S  D L+        I  +    R++L+ + ++
Sbjct: 84  GSYLKSTKLW--------IIMEYLGGGSALDLLKPGPLEETYIATIL---REILKGLDYL 132
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H  R IH D+K  N+LL     VK+ D+                           G  T 
Sbjct: 133 HSERKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLTD 168
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
                +  V T  + APEVI    +++  D+WS+G   +EL  GE
Sbjct: 169 TQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 139/337 (41%), Gaps = 81/337 (24%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIGGTRCVQ 157
           +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +   R V 
Sbjct: 40  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV---RIVD 92
Query: 158 I-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ ++H + +
Sbjct: 93  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 152
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 273
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 153 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 188
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 332
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 189 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 248
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           +                     R  + ++P+   S  S                      
Sbjct: 249 I---------------------RMGQYEFPNPEWSEVS---------------------- 265
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 266 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 302

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/364 (23%), Positives = 140/364 (38%), Gaps = 86/364 (23%)
Query: 69  GSPPWRPDDKDGHYVFAIGENLT-----PRCKI--LSKMGEGTFGQVVECFDNEKKELVA 121
           GS P R   +  H  F     L      PR  +    K+GEG+ G V         +LVA
Sbjct: 1   GSSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVA 60
Query: 122 IKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLY 180
           +K +    + R   +    V+ R  +H+      V++ N +   + + +V E L G +L 
Sbjct: 61  VKKMDLRKQQRRELLFNEVVIMRDYQHE----NVVEMYNSYLVGDELWVVMEFLEGGALT 116
Query: 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240
           D +          + +  +   +L++++ +H   +IH D+K ++ILL     VK+ D+ F
Sbjct: 117 DIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 173
Query: 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCD 300
            ++ SK+    K L                        V T ++ APE+I  L +    D
Sbjct: 174 CAQVSKEVPRRKXL------------------------VGTPYWMAPELISRLPYGPEVD 209
Query: 301 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 360
           +WS+G +++E+  GE  +     L+ + M+   L P                        
Sbjct: 210 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP------------------------ 245
Query: 361 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 420
                             RL NL        +  L   L  LL  DPA+R  A E L+HP
Sbjct: 246 ------------------RLKNL-----HKVSPSLKGFLDRLLVRDPAQRATAAELLKHP 282
Query: 421 FFTR 424
           F  +
Sbjct: 283 FLAK 286

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 122/292 (41%), Gaps = 44/292 (15%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLARH 148
           I  ++G G F  V +C +       A K ++            RE    E+ +L+++  H
Sbjct: 16  IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           ++     + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+ V
Sbjct: 76  NV-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGV 128
Query: 208 AFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
            ++H  ++ H DLKPENI+L+       ++K+ D+  L+   +DG  FKN+         
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI--------- 178
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
            FG              T  + APE++         D+WS+G I   L SG + F     
Sbjct: 179 -FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
            E LA +  V               A+ + R+    +     T ++++R  W
Sbjct: 224 QETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 122/292 (41%), Gaps = 44/292 (15%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLARH 148
           I  ++G G F  V +C +       A K ++            RE    E+ +L+++  H
Sbjct: 16  IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           ++     + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+ V
Sbjct: 76  NV-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGV 128
Query: 208 AFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
            ++H  ++ H DLKPENI+L+       ++K+ D+  L+   +DG  FKN+         
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI--------- 178
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
            FG              T  + APE++         D+WS+G I   L SG + F     
Sbjct: 179 -FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
            E LA +  V               A+ + R+    +     T ++++R  W
Sbjct: 224 QETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 139/337 (41%), Gaps = 92/337 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAM-IEIDVLQRLARHDIGGTRCVQ 157
           +G G F +V+   D   ++LVAIK I +   + +E +M  EI VL ++   +I     V 
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI-----VA 80
Query: 158 IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGR---QLLESVAFMHEL 213
           + + ++   H+ ++ + + G  L+D + +  + +      R+  R   Q+L++V ++H+L
Sbjct: 81  LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLIFQVLDAVKYLHDL 135
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
            ++H DLKPEN+L                        + +L + S I + DFG +  E  
Sbjct: 136 GIVHRDLKPENLL------------------------YYSLDEDSKIMISDFGLSKME-- 169
Query: 274 DHSYVVSTR----HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
           D   V+ST      Y APEV+    ++   D WS+G I   L  G   F    + +   +
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK---L 226
Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
            E++L             +AE  F      D  D A                        
Sbjct: 227 FEQIL-------------KAEYEFDSPYWDDISDSAK----------------------- 250
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 426
                  D ++ L+  DP +R    +AL+HP+   D 
Sbjct: 251 -------DFIRHLMEKDPEKRFTCEQALQHPWIAGDT 280

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 136/335 (40%), Gaps = 88/335 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAM-IEIDVLQRLARHDIGGTRCVQ 157
           +G G F +V+   D   ++LVAIK I +   + +E +M  EI VL ++   +I     V 
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI-----VA 80
Query: 158 IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGR---QLLESVAFMHEL 213
           + + ++   H+ ++ + + G  L+D + +  + +      R+  R   Q+L++V ++H+L
Sbjct: 81  LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLIFQVLDAVKYLHDL 135
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
            ++H DLKPEN+L                        + +L + S I + DFG +  E  
Sbjct: 136 GIVHRDLKPENLL------------------------YYSLDEDSKIMISDFGLSKMEDP 171
Query: 274 DH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
               S    T  Y APEV+    ++   D WS+G I   L  G   F    + +   + E
Sbjct: 172 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK---LFE 228
Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
           ++L             +AE  F      D  D A                          
Sbjct: 229 QIL-------------KAEYEFDSPYWDDISDSAK------------------------- 250
Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 426
                D ++ L+  DP +R    +AL+HP+   D 
Sbjct: 251 -----DFIRHLMEKDPEKRFTCEQALQHPWIAGDT 280

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 123/332 (37%), Gaps = 81/332 (24%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-REAAMIEIDVLQRLARHDIGGTR 154
           I  ++G G FG V    +       A K V + ++  +E    EI  +  L RH      
Sbjct: 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPT---- 215
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V + + F+  N + +++E + G  L++ +  + +     D   E  RQ+ + +  MHE 
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             +H DLKPENI+  +                          +S+ +KLIDFG T     
Sbjct: 275 NYVHLDLKPENIMFTTK-------------------------RSNELKLIDFGLTAHLDP 309
Query: 274 DHSYVVS--TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
             S  V+  T  + APEV  G    Y  D+WSVG +   L SG + F    + E L    
Sbjct: 310 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL---- 365
Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
                                 R     DW                    N+        
Sbjct: 366 ----------------------RNVKSCDW--------------------NMDDSAFSGI 383
Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
           + D  D ++ LL  DP  R+   +AL HP+ T
Sbjct: 384 SEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 123/332 (37%), Gaps = 81/332 (24%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-REAAMIEIDVLQRLARHDIGGTR 154
           I  ++G G FG V    +       A K V + ++  +E    EI  +  L RH      
Sbjct: 55  IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHPT---- 109
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V + + F+  N + +++E + G  L++ +  + +     D   E  RQ+ + +  MHE 
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             +H DLKPENI+  +                          +S+ +KLIDFG T     
Sbjct: 169 NYVHLDLKPENIMFTTK-------------------------RSNELKLIDFGLTAHLDP 203
Query: 274 DHSYVVS--TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
             S  V+  T  + APEV  G    Y  D+WSVG +   L SG + F    + E L    
Sbjct: 204 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL---- 259
Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
                                 R     DW                    N+        
Sbjct: 260 ----------------------RNVKSCDW--------------------NMDDSAFSGI 277
Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
           + D  D ++ LL  DP  R+   +AL HP+ T
Sbjct: 278 SEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 309

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 139/337 (41%), Gaps = 81/337 (24%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIGGTRCVQ 157
           +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +   R V 
Sbjct: 32  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV---RIVD 84
Query: 158 I-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ ++H + +
Sbjct: 85  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 144
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 273
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 145 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 180
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 332
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 181 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 240
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           +                     R  + ++P+   S  S                      
Sbjct: 241 I---------------------RMGQYEFPNPEWSEVS---------------------- 257
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 258 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 294

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 139/337 (41%), Gaps = 92/337 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAM-IEIDVLQRLARHDIGGTRCVQ 157
           +G G F +V+   D   ++LVAIK I +   + +E +M  EI VL ++   +I     V 
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI-----VA 80
Query: 158 IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGR---QLLESVAFMHEL 213
           + + ++   H+ ++ + + G  L+D + +  + +      R+  R   Q+L++V ++H+L
Sbjct: 81  LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLIFQVLDAVKYLHDL 135
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
            ++H DLKPEN+L                        + +L + S I + DFG +  E  
Sbjct: 136 GIVHRDLKPENLL------------------------YYSLDEDSKIMISDFGLSKME-- 169
Query: 274 DHSYVVSTR----HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
           D   V+ST      Y APEV+    ++   D WS+G I   L  G   F    + +   +
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK---L 226
Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
            E++L             +AE  F      D  D A                        
Sbjct: 227 FEQIL-------------KAEYEFDSPYWDDISDSAK----------------------- 250
Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV 426
                  D ++ L+  DP +R    +AL+HP+   D 
Sbjct: 251 -------DFIRHLMEKDPEKRFTCEQALQHPWIAGDT 280

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 139/337 (41%), Gaps = 81/337 (24%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIGGTRCVQ 157
           +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +   R V 
Sbjct: 24  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV---RIVD 76
Query: 158 I-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ ++H + +
Sbjct: 77  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 273
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 137 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 172
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 332
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 173 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 232
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           +                     R  + ++P+   S  S                      
Sbjct: 233 I---------------------RMGQYEFPNPEWSEVS---------------------- 249
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 250 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 286

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 139/337 (41%), Gaps = 81/337 (24%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIGGTRCVQ 157
           +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +   R V 
Sbjct: 31  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV---RIVD 83
Query: 158 I-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ ++H + +
Sbjct: 84  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 143
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 273
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 144 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 179
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 332
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 180 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 239
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           +                     R  + ++P+   S  S                      
Sbjct: 240 I---------------------RMGQYEFPNPEWSEVS---------------------- 256
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 257 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 293

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 128/297 (43%), Gaps = 44/297 (14%)
Query: 81  HYVFAIGENLTP-RCKILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSIN---KYRE 133
           H+V A  E   P   ++L  +G+G+FG+V    +    +   L A+K+++      + R 
Sbjct: 16  HHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV 75
Query: 134 AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFP 192
              +E D+L      D+     V++   F     + ++ + L G  L+  L K     F 
Sbjct: 76  RTKMERDILA-----DVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FT 128
Query: 193 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
            + V+    +L   +  +H L +I+ DLKPENILL    ++K+ D+  LS+ + D     
Sbjct: 129 EEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG-LSKEAID----- 182
Query: 253 NLPKSSAIKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                              H+  +Y    T  Y APEV+   G ++  D WS G ++ E+
Sbjct: 183 -------------------HEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEM 223
Query: 312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR--GARL-DWPDGA 365
            +G   FQ  +  E + ++ +    +P  +   A       F+R    RL   PDGA
Sbjct: 224 LTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGA 280

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 139/337 (41%), Gaps = 81/337 (24%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIGGTRCVQ 157
           +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +   R V 
Sbjct: 30  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV---RIVD 82
Query: 158 I-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ ++H + +
Sbjct: 83  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 142
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 273
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 143 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 178
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 332
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 179 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 238
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           +                     R  + ++P+   S  S                      
Sbjct: 239 I---------------------RMGQYEFPNPEWSEVS---------------------- 255
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 256 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 292

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 139/337 (41%), Gaps = 81/337 (24%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIGGTRCVQ 157
           +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +   R V 
Sbjct: 25  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV---RIVD 77
Query: 158 I-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ ++H + +
Sbjct: 78  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 137
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 273
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 138 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 173
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 332
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 174 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 233
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           +                     R  + ++P+   S  S                      
Sbjct: 234 I---------------------RMGQYEFPNPEWSEVS---------------------- 250
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 251 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 287

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 35/222 (15%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIGGTR 154
           L ++G+G+FG+V +  DN  +++VAIKI+         E    EI VL +        + 
Sbjct: 28  LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSSY 82
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             +    +   + + I+ E L G S  D LR   +  F I     + +++L+ + ++H  
Sbjct: 83  VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQI---ATMLKEILKGLDYLHSE 139
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           + IH D+K  N+LL     VK+ D+                           G  T    
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLTDTQI 175
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
             +  V T  + APEVI    ++   D+WS+G   +EL  GE
Sbjct: 176 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 29  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 85
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H  R
Sbjct: 86  --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 141
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +IH DLK  N+ L     VK+ D+   ++   DG   K L                    
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-------------------- 181
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
                 T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T
Sbjct: 182 ----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 223

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 139/337 (41%), Gaps = 81/337 (24%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIGGTRCVQ 157
           +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +   R V 
Sbjct: 70  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV---RIVD 122
Query: 158 I-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ ++H + +
Sbjct: 123 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 182
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 273
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 183 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 218
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 332
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 278
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           +                     R  + ++P+   S  S                      
Sbjct: 279 I---------------------RMGQYEFPNPEWSEVS---------------------- 295
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 296 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 332

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 48/252 (19%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L  +G+GTFG+V+   +       A+KI+R           E+ + +    H +  +R +
Sbjct: 13  LKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTESRVL 62
Query: 157 Q---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q         ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ +
Sbjct: 63  QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + ++H   +++ D+K EN++L    ++K+ D+        DG+  K              
Sbjct: 121 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF------------ 168
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENL 324
                         T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L
Sbjct: 169 ------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 216
Query: 325 EHLAMMERVLGP 336
             L +ME +  P
Sbjct: 217 FELILMEEIRFP 228

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 139/337 (41%), Gaps = 81/337 (24%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIGGTRCVQ 157
           +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +   R V 
Sbjct: 26  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV---RIVD 78
Query: 158 I-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ ++H + +
Sbjct: 79  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 273
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 139 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 174
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 332
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 175 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 234
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           +                     R  + ++P+   S  S                      
Sbjct: 235 I---------------------RMGQYEFPNPEWSEVS---------------------- 251
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 252 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 288

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 81
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H  R
Sbjct: 82  --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 137
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +IH DLK  N+ L     VK+ D+   ++   DG   K L                    
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-------------------- 177
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
                 T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T
Sbjct: 178 ----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 219

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 139/337 (41%), Gaps = 81/337 (24%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIGGTRCVQ 157
           +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +   R V 
Sbjct: 26  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV---RIVD 78
Query: 158 I-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ ++H + +
Sbjct: 79  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 273
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 139 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 174
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 332
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 175 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 234
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           +                     R  + ++P+   S  S                      
Sbjct: 235 I---------------------RMGQYEFPNPEWSEVS---------------------- 251
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 252 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 288

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 48/252 (19%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L  +G+GTFG+V+   +       A+KI+R           E+ + +    H +  +R +
Sbjct: 10  LKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTESRVL 59
Query: 157 Q---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q         ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ +
Sbjct: 60  QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSA 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + ++H   +++ D+K EN++L    ++K+ D+        DG+  K              
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF------------ 165
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENL 324
                         T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L
Sbjct: 166 ------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
Query: 325 EHLAMMERVLGP 336
             L +ME +  P
Sbjct: 214 FELILMEEIRFP 225

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 139/337 (41%), Gaps = 81/337 (24%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIGGTRCVQ 157
           +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +   R V 
Sbjct: 76  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV---RIVD 128
Query: 158 I-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ ++H + +
Sbjct: 129 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 188
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 273
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 189 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 224
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 332
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 225 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 284
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           +                     R  + ++P+   S  S                      
Sbjct: 285 I---------------------RMGQYEFPNPEWSEVS---------------------- 301
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 302 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 338

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 139/337 (41%), Gaps = 81/337 (24%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIGGTRCVQ 157
           +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +   R V 
Sbjct: 24  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV---RIVD 76
Query: 158 I-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ ++H + +
Sbjct: 77  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 273
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 137 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 172
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMMER 332
             +    T +Y APEV+    ++  CD+WS+G I+ + LC     +  H       M  R
Sbjct: 173 SLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 232
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           +                     R  + ++P+   S  S                      
Sbjct: 233 I---------------------RMGQYEFPNPEWSEVS---------------------- 249
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
            ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 250 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 286

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 81
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H  R
Sbjct: 82  --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 137
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +IH DLK  N+ L     VK+ D+   ++   DG   K L                    
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-------------------- 177
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
                 T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T
Sbjct: 178 ----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 219

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 48/252 (19%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L  +G+GTFG+V+   +       A+KI+R           E+ + +    H +  +R +
Sbjct: 10  LKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTESRVL 59
Query: 157 Q---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q         ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ +
Sbjct: 60  QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSA 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + ++H   +++ D+K EN++L    ++K+ D+        DG+  K              
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF------------ 165
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENL 324
                         T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L
Sbjct: 166 ------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
Query: 325 EHLAMMERVLGP 336
             L +ME +  P
Sbjct: 214 FELILMEEIRFP 225

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 120/296 (40%), Gaps = 41/296 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSI-------NKYREAAMIEIDVLQRLARHDIG 151
           ++G G F  V +C      +  A K ++            RE    E+++L+ +   +I 
Sbjct: 12  ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI- 70
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               + + + F+ +  + ++ E + G  L+DFL +    S   D   +  +Q+L+ V ++
Sbjct: 71  ----ITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYL 124
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H  R+ H DLKPENI+L+                       KN+P +  IKLIDFG    
Sbjct: 125 HSKRIAHFDLKPENIMLLD----------------------KNVP-NPRIKLIDFGIAHK 161
Query: 271 EHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
               + +  +  T  + APE++         D+WS+G I   L SG + F      E L 
Sbjct: 162 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT 221
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW-KLLRLPNL 383
            +  V               A+ + RR    D     T   S+   W K +R  N+
Sbjct: 222 NISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNV 277

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 119/273 (43%), Gaps = 46/273 (16%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           L K+GEG+FG+ +     E      IK   I R  +K RE +  E+ VL  +   +I   
Sbjct: 29  LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI--- 85
Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             VQ R  F+    + IV +   G  L+  +       F  D + +   Q+  ++  +H+
Sbjct: 86  --VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD 143
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-----S 267
            +++H D+K +NI L                 +KDG+          ++L DFG     +
Sbjct: 144 RKILHRDIKSQNIFL-----------------TKDGT----------VQLGDFGIARVLN 176
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ--THENLE 325
           +T E       + T +Y +PE+     +N   D+W++GC+L ELC+ +  F+  + +NL 
Sbjct: 177 STVELARA--CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV 234
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGAR 358
            L ++     P+  H          + F+R  R
Sbjct: 235 -LKIISGSFPPVSLHYSYDLRSLVSQLFKRNPR 266

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 49/289 (16%)
Query: 48  GNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPR--CKILSKMGEGTF 105
           GN G+    C  +   ++P   S P +P +KD   +        PR   K+  K+G G F
Sbjct: 157 GNDGL----CQKL---SVPCMSSKPQKPWEKDAWEI--------PRESLKLEKKLGAGQF 201
Query: 106 GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165
           G+V     N K   VA+K ++  +   EA + E +V++ L +HD    + V++      +
Sbjct: 202 GEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHD----KLVKLHAVVT-K 254
Query: 166 NHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN 224
             I I+ E +   SL DFL+ +     P+  + +   Q+ E +AF+ +   IH DL+  N
Sbjct: 255 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAAN 314
Query: 225 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 284
           IL+ ++   K+ D+  L+R  +D  Y         IK                      +
Sbjct: 315 ILVSASLVCKIADFG-LARVIEDNEYTAREGAKFPIK----------------------W 351
Query: 285 RAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
            APE I    +    D+WS G +L+E+ + G   +    N E +  +ER
Sbjct: 352 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 400

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 131/327 (40%), Gaps = 79/327 (24%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+GEG+ G V         +LVA+K +    + R   +    V+ R  +H+      V++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE----NVVEM 213
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
            N +   + + +V E L G +L D +   ++     + +  +   +L++++ +H   +IH
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIH 270
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            D+K ++ILL     VK+ D+ F ++ SK+    K L                       
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 307
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
            V T ++ APE+I  L +    D+WS+G +++E+  GE  +     L+ + M+   L P 
Sbjct: 308 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP- 365
Query: 338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 397
                                                    RL NL        +  L  
Sbjct: 366 -----------------------------------------RLKNL-----HKVSPSLKG 379
Query: 398 LLQGLLRYDPAERLKAREALRHPFFTR 424
            L  LL  DPA+R  A E L+HPF  +
Sbjct: 380 FLDRLLVRDPAQRATAAELLKHPFLAK 406

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 129/294 (43%), Gaps = 49/294 (16%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVR--------------SINKYREAAMIEIDVLQR 144
           K+G G +G+V+ C +       AIK+++              +I K+ E    EI +L+ 
Sbjct: 43  KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
           L   +I     +++ + F+ + +  +V E   G  L++ +  N ++    D    + +Q+
Sbjct: 103 LDHPNI-----IKLFDVFEDKKYFYLVTEFYEGGELFEQII-NRHKFDECDAAN-IMKQI 155
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
           L  + ++H+  ++H D+KPENILL                        +N      IK++
Sbjct: 156 LSGICYLHKHNIVHRDIKPENILL------------------------ENKNSLLNIKIV 191
Query: 264 DFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
           DFG ++F  +D+     + T +Y APEV L   +N  CD+WS G I+  L  G   F   
Sbjct: 192 DFGLSSFFSKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPPFGGQ 250
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
            + + +  +E+       +        A++  +     D+    T+ +++ + W
Sbjct: 251 NDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRW 304

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 48/252 (19%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L  +G+GTFG+V+   +       A+KI+R           E+ + +    H +  +R +
Sbjct: 10  LKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTESRVL 59
Query: 157 Q---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q         ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ +
Sbjct: 60  QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSA 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + ++H   +++ D+K EN++L    ++K+ D+        DG+  K              
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF------------ 165
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENL 324
                         T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L
Sbjct: 166 ------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
Query: 325 EHLAMMERVLGP 336
             L +ME +  P
Sbjct: 214 FELILMEEIRFP 225

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 110/267 (41%), Gaps = 40/267 (14%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSI-------NKYREAAMIEIDVLQRLARHDIG 151
           ++G G F  V +C      +  A K ++            RE    E+++L+ +   +I 
Sbjct: 33  ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNI- 91
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               + + + F+ +  + ++ E + G  L+DFL +    S   D   +  +Q+L+ V ++
Sbjct: 92  ----ITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYL 145
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H  R+ H DLKPENI+L+                       KN+P +  IKLIDFG    
Sbjct: 146 HSKRIAHFDLKPENIMLLD----------------------KNVP-NPRIKLIDFGIAHK 182
Query: 271 EHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
               + +  +  T  + APE++         D+WS+G I   L SG + F      E L 
Sbjct: 183 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT 242
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRR 355
            +  V               A+ + RR
Sbjct: 243 NISAVNYDFDEEYFSNTSELAKDFIRR 269

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 48/252 (19%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L  +G+GTFG+V+   +       A+KI+R           E+ + +    H +  +R +
Sbjct: 10  LKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTESRVL 59
Query: 157 Q---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q         ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ +
Sbjct: 60  QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSA 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + ++H   +++ D+K EN++L    ++K+ D+        DG+  K              
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF------------ 165
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENL 324
                         T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L
Sbjct: 166 ------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
Query: 325 EHLAMMERVLGP 336
             L +ME +  P
Sbjct: 214 FELILMEEIRFP 225

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 129/327 (39%), Gaps = 79/327 (24%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+GEG+ G V         +LVA+K +    + R   +    V+ R  +H+      V++
Sbjct: 81  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE----NVVEM 136
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
            N +   + + +V E L G +L D +          + +  +   +L++++ +H   +IH
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 193
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            D+K ++ILL     VK+ D+ F ++ SK+    K L                       
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 230
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
            V T ++ APE+I  L +    D+WS+G +++E+  GE  +     L+ + M+   L P 
Sbjct: 231 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP- 288
Query: 338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 397
                                                    RL NL        +  L  
Sbjct: 289 -----------------------------------------RLKNL-----HKVSPSLKG 302
Query: 398 LLQGLLRYDPAERLKAREALRHPFFTR 424
            L  LL  DPA+R  A E L+HPF  +
Sbjct: 303 FLDRLLVRDPAQRATAAELLKHPFLAK 329

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG+V+     E     A+KI+    K  +   IE  + ++  +  +     V++ 
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRIQQAVNFPFLVKLE 108
Query: 160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
             F   +++ +V E   G  ++  LR+    S P    R    Q++ +  ++H L LI+ 
Sbjct: 109 FSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDLIYR 166
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DLKPEN+L+    Y+KV D+ F  R                      G T         +
Sbjct: 167 DLKPENLLIDQQGYIKVADFGFAKRVK--------------------GRTW-------XL 199
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 48/252 (19%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L  +G+GTFG+V+   +       A+KI+R           E+ + +    H +  +R +
Sbjct: 15  LKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTESRVL 64
Query: 157 Q---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q         ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ +
Sbjct: 65  QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSA 122
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + ++H   +++ D+K EN++L    ++K+ D+        DG+  K              
Sbjct: 123 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF------------ 170
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENL 324
                         T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L
Sbjct: 171 ------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 218
Query: 325 EHLAMMERVLGP 336
             L +ME +  P
Sbjct: 219 FELILMEEIRFP 230

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 48/252 (19%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L  +G+GTFG+V+   +       A+KI+R           E+ + +    H +  +R +
Sbjct: 10  LKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTESRVL 59
Query: 157 Q---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q         ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ +
Sbjct: 60  QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSA 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + ++H   +++ D+K EN++L    ++K+ D+        DG+  K              
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF------------ 165
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENL 324
                         T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L
Sbjct: 166 ------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213
Query: 325 EHLAMMERVLGP 336
             L +ME +  P
Sbjct: 214 FELILMEEIRFP 225

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 132/341 (38%), Gaps = 93/341 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVR---------SINKYREAAMIEIDVLQRLARHDI 150
           +G G    V  C         A+KI+           + + REA   E  +L+++A H  
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH-- 159
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                + + + ++  + + +VF+ +    L+D+L +    +      R + R LLE+V+F
Sbjct: 160 --PHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSF 215
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H   ++H DLKPENILL     +++ D+ F S   + G   + L               
Sbjct: 216 LHANNIVHRDLKPENILLDDNMQIRLSDFGF-SCHLEPGEKLREL--------------- 259
Query: 270 FEHQDHSYVVSTRHYRAPEVI------LGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
                      T  Y APE++         G+    DLW+ G IL  L +G   F     
Sbjct: 260 ---------CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ 310
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
           +                +++R     +  F   +  +W D +++                
Sbjct: 311 I----------------LMLRMIMEGQYQF---SSPEWDDRSST---------------- 335
Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
                      + DL+  LL+ DP  RL A +AL+HPFF R
Sbjct: 336 -----------VKDLISRLLQVDPEARLTAEQALQHPFFER 365

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 105
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H  R
Sbjct: 106 --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 161
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +IH DLK  N+ L     VK+ D+   ++   DG   K L                    
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL-------------------- 201
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
                 T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T
Sbjct: 202 ----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 243

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 47  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 103
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H  R
Sbjct: 104 --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 159
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +IH DLK  N+ L     VK+ D+   ++   DG   K L                    
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL-------------------- 199
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
                 T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T
Sbjct: 200 ----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 241

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G F +  E  D + KE+ A K+V +S+      +E    EI + + L    + G   
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG--- 106
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                +F+  + + +V E     SL +  ++    + P    R   RQ ++ V ++H  R
Sbjct: 107 --FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQGVQYLHNNR 162
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +IH DLK  N+ L     VK+ D+   ++   DG   K+L                    
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL-------------------- 202
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
                 T +Y APEV+   G ++  D+WS+GCIL  L  G+  F+T
Sbjct: 203 ----CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 129/327 (39%), Gaps = 79/327 (24%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+GEG+ G V         +LVA+K +    + R   +    V+ R  +H+      V++
Sbjct: 36  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE----NVVEM 91
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
            N +   + + +V E L G +L D +          + +  +   +L++++ +H   +IH
Sbjct: 92  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 148
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            D+K ++ILL     VK+ D+ F ++ SK+    K L                       
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 185
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
            V T ++ APE+I  L +    D+WS+G +++E+  GE  +     L+ + M+   L P 
Sbjct: 186 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP- 243
Query: 338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 397
                                                    RL NL        +  L  
Sbjct: 244 -----------------------------------------RLKNL-----HKVSPSLKG 257
Query: 398 LLQGLLRYDPAERLKAREALRHPFFTR 424
            L  LL  DPA+R  A E L+HPF  +
Sbjct: 258 FLDRLLVRDPAQRATAAELLKHPFLAK 284

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 145/366 (39%), Gaps = 109/366 (29%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLARH 148
           IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L +H
Sbjct: 60  ILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQH 114
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+V 
Sbjct: 115 ---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVH 169
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
            +H+  ++H+DLKP N L+V                  DG           +KLIDFG  
Sbjct: 170 TIHQHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIA 201
Query: 269 TFEHQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELC 312
                D + V     V T +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 202 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261
Query: 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
            G+  FQ  + +  ++ +  ++ P                      +++PD         
Sbjct: 262 YGKTPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD--------- 291
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 432
                  +P            DL D+L+  L+ DP +R+   E L HP+       P   
Sbjct: 292 -------IPE----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQ 333
Query: 433 VATGET 438
           +A G T
Sbjct: 334 MAKGTT 339

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 145/366 (39%), Gaps = 109/366 (29%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLARH 148
           IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L +H
Sbjct: 13  ILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQH 67
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+V 
Sbjct: 68  ---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVH 122
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
            +H+  ++H+DLKP N L+V                  DG           +KLIDFG  
Sbjct: 123 TIHQHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIA 154
Query: 269 TFEHQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELC 312
                D + V     V T +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 155 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 214
Query: 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
            G+  FQ  + +  ++ +  ++ P                      +++PD         
Sbjct: 215 YGKTPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD--------- 244
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 432
                  +P            DL D+L+  L+ DP +R+   E L HP+       P   
Sbjct: 245 -------IP----------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQ 286
Query: 433 VATGET 438
           +A G T
Sbjct: 287 MAKGTT 292

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 79
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H  R
Sbjct: 80  --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 135
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +IH DLK  N+ L     VK+ D+   ++   DG   K L                    
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL-------------------- 175
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
                 T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T
Sbjct: 176 ----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 217

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 129/327 (39%), Gaps = 79/327 (24%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+GEG+ G V         +LVA+K +    + R   +    V+ R  +H+      V++
Sbjct: 27  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE----NVVEM 82
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
            N +   + + +V E L G +L D +          + +  +   +L++++ +H   +IH
Sbjct: 83  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 139
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            D+K ++ILL     VK+ D+ F ++ SK+    K L                       
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 176
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
            V T ++ APE+I  L +    D+WS+G +++E+  GE  +     L+ + M+   L P 
Sbjct: 177 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP- 234
Query: 338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 397
                                                    RL NL        +  L  
Sbjct: 235 -----------------------------------------RLKNL-----HKVSPSLKG 248
Query: 398 LLQGLLRYDPAERLKAREALRHPFFTR 424
            L  LL  DPA+R  A E L+HPF  +
Sbjct: 249 FLDRLLVRDPAQRATAAELLKHPFLAK 275

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 129/327 (39%), Gaps = 79/327 (24%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+GEG+ G V         +LVA+K +    + R   +    V+ R  +H+      V++
Sbjct: 31  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE----NVVEM 86
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
            N +   + + +V E L G +L D +          + +  +   +L++++ +H   +IH
Sbjct: 87  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 143
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            D+K ++ILL     VK+ D+ F ++ SK+    K L                       
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 180
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
            V T ++ APE+I  L +    D+WS+G +++E+  GE  +     L+ + M+   L P 
Sbjct: 181 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP- 238
Query: 338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 397
                                                    RL NL        +  L  
Sbjct: 239 -----------------------------------------RLKNL-----HKVSPSLKG 252
Query: 398 LLQGLLRYDPAERLKAREALRHPFFTR 424
            L  LL  DPA+R  A E L+HPF  +
Sbjct: 253 FLDRLLVRDPAQRATAAELLKHPFLAK 279

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 145/366 (39%), Gaps = 109/366 (29%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLARH 148
           IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L +H
Sbjct: 60  ILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQH 114
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+V 
Sbjct: 115 ---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVH 169
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
            +H+  ++H+DLKP N L+V                  DG           +KLIDFG  
Sbjct: 170 TIHQHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIA 201
Query: 269 TFEHQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELC 312
                D + V     V T +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 202 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261
Query: 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
            G+  FQ  + +  ++ +  ++ P                      +++PD         
Sbjct: 262 YGKTPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD--------- 291
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 432
                  +P            DL D+L+  L+ DP +R+   E L HP+       P   
Sbjct: 292 -------IPE----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQ 333
Query: 433 VATGET 438
           +A G T
Sbjct: 334 MAKGTT 339

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 67  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 183
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G+T       
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GATW------ 217
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 218 -TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G F +  E  D + KE+ A K+V +S+      +E    EI + + L    + G   
Sbjct: 34  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG--- 90
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                +F+  + + +V E     SL +  ++    + P    R   RQ ++ V ++H  R
Sbjct: 91  --FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQGVQYLHNNR 146
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +IH DLK  N+ L     VK+ D+   ++   DG   K+L                    
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL-------------------- 186
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
                 T +Y APEV+   G ++  D+WS+GCIL  L  G+  F+T
Sbjct: 187 ----CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 228

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTIGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y+KV D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G F +  E  D + KE+ A K+V +S+      +E    EI + + L    + G   
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG--- 106
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                +F+  + + +V E     SL +  ++    + P    R   RQ ++ V ++H  R
Sbjct: 107 --FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQGVQYLHNNR 162
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +IH DLK  N+ L     VK+ D+   ++   DG   K L                    
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL-------------------- 202
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
                 T +Y APEV+   G ++  D+WS+GCIL  L  G+  F+T
Sbjct: 203 ----CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 145/366 (39%), Gaps = 109/366 (29%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLARH 148
           IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L +H
Sbjct: 32  ILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQH 86
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+V 
Sbjct: 87  ---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVH 141
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
            +H+  ++H+DLKP N L+V                  DG           +KLIDFG  
Sbjct: 142 TIHQHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIA 173
Query: 269 TFEHQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELC 312
                D + V     V T +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 174 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 233
Query: 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
            G+  FQ  + +  ++ +  ++ P                      +++PD         
Sbjct: 234 YGKTPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD--------- 263
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 432
                  +P            DL D+L+  L+ DP +R+   E L HP+       P   
Sbjct: 264 -------IP----------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQ 305
Query: 433 VATGET 438
           +A G T
Sbjct: 306 MAKGTT 311

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTIGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y+KV D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 40/242 (16%)
Query: 86  IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDV 141
           +G N     +I  K+G G F +V           VA+K V+  +    K R   + EID+
Sbjct: 26  MGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDL 85
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFE-----KLGPSLYDFLRKNSYRSFPIDLV 196
           L++L   ++     ++    F   N + IV E      L   +  F  K   R  P   V
Sbjct: 86  LKQLNHPNV-----IKYYASFIEDNELNIVLELADAGDLSRMIKHF--KKQKRLIPERTV 138
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
            +   QL  ++  MH  R++H D+KP N+ + +   VK+ D          G +F +   
Sbjct: 139 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL-------GRFFSS--- 188
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 316
                      TT  H     +V T +Y +PE I   G+N+  D+WS+GC+L E+ + ++
Sbjct: 189 ----------KTTAAHS----LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS 234
Query: 317 LF 318
            F
Sbjct: 235 PF 236

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKETGNHFAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKETGNHFAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 145/366 (39%), Gaps = 109/366 (29%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLARH 148
           IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L +H
Sbjct: 16  ILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQH 70
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+V 
Sbjct: 71  ---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVH 125
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
            +H+  ++H+DLKP N L+V                  DG           +KLIDFG  
Sbjct: 126 TIHQHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIA 157
Query: 269 TFEHQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELC 312
                D + V     V T +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 158 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 217
Query: 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
            G+  FQ  + +  ++ +  ++ P                      +++PD         
Sbjct: 218 YGKTPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD--------- 247
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 432
                  +P            DL D+L+  L+ DP +R+   E L HP+       P   
Sbjct: 248 -------IP----------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQ 289
Query: 433 VATGET 438
           +A G T
Sbjct: 290 MAKGTT 295

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKETGNHFAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTIGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y+KV D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 67  IKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 126 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 183
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 217
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 218 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 36/226 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G F +  E  D + KE+ A K+V +S+      +E    EI + + L    + G   
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG--- 106
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                +F+  + + +V E     SL +  ++    + P    R   RQ ++ V ++H  R
Sbjct: 107 --FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQGVQYLHNNR 162
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +IH DLK  N+ L     VK+ D+   ++   DG   K L                    
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL-------------------- 202
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
                 T +Y APEV+   G ++  D+WS+GCIL  L  G+  F+T
Sbjct: 203 ----CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 35/227 (15%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDIGGT 153
           +I+ ++G+G FG+V +  + E   L A K++ + ++   E  ++EI++L       I   
Sbjct: 14  EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI--- 70
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++   + +   + I+ E       D +     R      ++ + RQ+LE++ F+H  
Sbjct: 71  --VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           R+IH DLK  N+L+     +++ D+         G   KNL              T + +
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADF---------GVSAKNL-------------KTLQKR 166
Query: 274 DHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGE 315
           D    + T ++ APEV++        ++Y  D+WS+G  L+E+   E
Sbjct: 167 DS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 211

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 144/366 (39%), Gaps = 109/366 (29%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLARH 148
           IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L +H
Sbjct: 32  ILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQH 86
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+V 
Sbjct: 87  ---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVH 141
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
            +H+  ++H+DLKP N L+V                  DG           +KLIDFG  
Sbjct: 142 TIHQHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIA 173
Query: 269 TFEHQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELC 312
                D   V     V T +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 174 NQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 233
Query: 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
            G+  FQ  + +  ++ +  ++ P                      +++PD         
Sbjct: 234 YGKTPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD--------- 263
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 432
                  +P            DL D+L+  L+ DP +R+   E L HP+       P   
Sbjct: 264 -------IP----------EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQ 305
Query: 433 VATGET 438
           +A G T
Sbjct: 306 MAKGTT 311

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 35/227 (15%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDIGGT 153
           +I+ ++G+G FG+V +  + E   L A K++ + ++   E  ++EI++L       I   
Sbjct: 22  EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI--- 78
Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++   + +   + I+ E       D +     R      ++ + RQ+LE++ F+H  
Sbjct: 79  --VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           R+IH DLK  N+L+     +++ D+         G   KNL              T + +
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADF---------GVSAKNL-------------KTLQKR 174
Query: 274 DHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGE 315
           D    + T ++ APEV++        ++Y  D+WS+G  L+E+   E
Sbjct: 175 DS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 129/307 (42%), Gaps = 64/307 (20%)
Query: 81  HYVFAIGENLTP-RCKILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSINKYREAAM 136
           H+V    E   P + ++L  +G+G+FG+V    +   ++ ++L A+K+++      +A +
Sbjct: 12  HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK------KATL 65
Query: 137 IEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLV 196
              D ++     DI     V++ + F  + H     E     + DFLR         DL 
Sbjct: 66  KVRDRVRTKMERDI----LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG-------DLF 114
Query: 197 RELGRQLL---ESVAF-----------MHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242
             L ++++   E V F           +H L +I+ DLKPENILL    ++K+ D+  LS
Sbjct: 115 TRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG-LS 173
Query: 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDL 301
           + S D                        H+  +Y    T  Y APEV+   G     D 
Sbjct: 174 KESID------------------------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADW 209
Query: 302 WSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR--GARL 359
           WS G ++ E+ +G   FQ  +  E + M+ +    +P  +   A       F+R    RL
Sbjct: 210 WSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRL 269
Query: 360 D-WPDGA 365
              PDG 
Sbjct: 270 GAGPDGV 276

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 47  IKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 163
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 197
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 198 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 145/366 (39%), Gaps = 109/366 (29%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLARH 148
           IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L +H
Sbjct: 12  ILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQH 66
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+V 
Sbjct: 67  ---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVH 121
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
            +H+  ++H+DLKP N L+V                  DG           +KLIDFG  
Sbjct: 122 TIHQHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIA 153
Query: 269 TFEHQDHSYV-----VSTRHYRAPEVILGLGWN-----------YPCDLWSVGCILVELC 312
                D + V     V T +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 154 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 213
Query: 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
            G+  FQ  + +  ++ +  ++ P                      +++PD         
Sbjct: 214 YGKTPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD--------- 243
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 432
                  +P            DL D+L+  L+ DP +R+   E L HP+       P   
Sbjct: 244 -------IPE----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQ 285
Query: 433 VATGET 438
           +A G T
Sbjct: 286 MAKGTT 291

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 47  IKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 163
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 197
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 198 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 47  IKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 163
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 197
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 198 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 47  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 106 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 163
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 197
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 198 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 39  IKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 97
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 98  KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 155
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 156 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 189
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 190 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 31/230 (13%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G   F   E ++
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQ 245

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 122/292 (41%), Gaps = 44/292 (15%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-------REAAMIEIDVLQRLARH 148
           I  ++G G F  V +C +       A K ++            RE    E+ +L+++   
Sbjct: 16  IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHP 75
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           +I     + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+ V
Sbjct: 76  NI-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGV 128
Query: 208 AFMHELRLIHTDLKPENILLVSAE----YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
            ++H  ++ H DLKPENI+L+       ++K+ D+  L+   +DG  FKN+         
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-LAHEIEDGVEFKNI--------- 178
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
            FG              T  + APE++         D+WS+G I   L SG + F     
Sbjct: 179 -FG--------------TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
            E LA +  V          +    A+ + R+    +     T ++++R  W
Sbjct: 224 QETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 33  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 91
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 92  KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 149
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 150 IYRDLKPENLLIDEQGYIQVTDFGFAKRVK--------------------GRTW------ 183
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 184 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 47  IKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E   G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 106 KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 163
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+++    Y+KV D+ F  R                      G T       
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVK--------------------GRTW------ 197
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 198 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 84/366 (22%), Positives = 144/366 (39%), Gaps = 109/366 (29%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLARH 148
           IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L +H
Sbjct: 60  ILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQH 114
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+V 
Sbjct: 115 ---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVH 169
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
            +H+  ++H+DLKP N L+V                  DG           +KLIDFG  
Sbjct: 170 TIHQHGIVHSDLKPANFLIV------------------DG----------MLKLIDFGIA 201
Query: 269 TFEHQDHSYVVSTR-----HYRAPEVILGLGWN-----------YPCDLWSVGCILVELC 312
                D + VV        +Y  PE I  +  +              D+WS+GCIL  + 
Sbjct: 202 NQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261
Query: 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
            G+  FQ  + +  ++ +  ++ P                      +++PD         
Sbjct: 262 YGKTPFQ--QIINQISKLHAIIDP-------------------NHEIEFPD--------- 291
Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 432
                  +P            DL D+L+  L+ DP +R+   E L HP+       P   
Sbjct: 292 -------IPE----------KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT-HPVNQ 333
Query: 433 VATGET 438
           +A G T
Sbjct: 334 MAKGTT 339

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 129/307 (42%), Gaps = 64/307 (20%)
Query: 81  HYVFAIGENLTP-RCKILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSINKYREAAM 136
           H+V    E   P + ++L  +G+G+FG+V    +   ++ ++L A+K+++      +A +
Sbjct: 13  HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK------KATL 66
Query: 137 IEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLV 196
              D ++     DI     V++ + F  + H     E     + DFLR         DL 
Sbjct: 67  KVRDRVRTKMERDI----LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG-------DLF 115
Query: 197 RELGRQLL---ESVAF-----------MHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242
             L ++++   E V F           +H L +I+ DLKPENILL    ++K+ D+  LS
Sbjct: 116 TRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG-LS 174
Query: 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDL 301
           + S D                        H+  +Y    T  Y APEV+   G     D 
Sbjct: 175 KESID------------------------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADW 210
Query: 302 WSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR--GARL 359
           WS G ++ E+ +G   FQ  +  E + M+ +    +P  +   A       F+R    RL
Sbjct: 211 WSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRL 270
Query: 360 D-WPDGA 365
              PDG 
Sbjct: 271 GAGPDGV 277

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 36/219 (16%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM-IEIDVLQRLARHDIGGTRCVQI 158
           +G G F +V         +L A+K ++    +R++++  EI VL+++   +I     V +
Sbjct: 17  LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENI-----VTL 71
Query: 159 RNWFDYRNHICIVFEKL-GPSLYD-FLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLI 216
            + ++   H  +V + + G  L+D  L +  Y      LV +   Q+L +V ++HE  ++
Sbjct: 72  EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ---QVLSAVKYLHENGIV 128
Query: 217 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-H 275
           H DLKPEN+L ++ E                        ++S I + DFG +  E     
Sbjct: 129 HRDLKPENLLYLTPE------------------------ENSKIMITDFGLSKMEQNGIM 164
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           S    T  Y APEV+    ++   D WS+G I   L  G
Sbjct: 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 129/307 (42%), Gaps = 64/307 (20%)
Query: 81  HYVFAIGENLTP-RCKILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSINKYREAAM 136
           H+V    E   P + ++L  +G+G+FG+V    +   ++ ++L A+K+++      +A +
Sbjct: 12  HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK------KATL 65
Query: 137 IEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLV 196
              D ++     DI     V++ + F  + H     E     + DFLR         DL 
Sbjct: 66  KVRDRVRTKMERDI----LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGG-------DLF 114
Query: 197 RELGRQLL---ESVAF-----------MHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242
             L ++++   E V F           +H L +I+ DLKPENILL    ++K+ D+  LS
Sbjct: 115 TRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG-LS 173
Query: 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDL 301
           + S D                        H+  +Y    T  Y APEV+   G     D 
Sbjct: 174 KESID------------------------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADW 209
Query: 302 WSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR--GARL 359
           WS G ++ E+ +G   FQ  +  E + M+ +    +P  +   A       F+R    RL
Sbjct: 210 WSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRL 269
Query: 360 D-WPDGA 365
              PDG 
Sbjct: 270 GAGPDGV 276

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 47  IKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 163
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 197
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 198 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 32  IKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 90
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 91  KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 148
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 149 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 182
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 183 -TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E   G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+++    Y+KV D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/336 (21%), Positives = 131/336 (38%), Gaps = 83/336 (24%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G++ +   C         A+K+   I+K +     EI++L R  +H       + ++
Sbjct: 35  IGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEIEILLRYGQH----PNIITLK 87
Query: 160 NWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLV-RELGRQLLESVAFMHELRLI 216
           + +D   H+ +V E +  G  L   LR+  +       V   +G+    +V ++H   ++
Sbjct: 88  DVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGK----TVEYLHSQGVV 143
Query: 217 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 276
           H DLKP NIL                       Y         +++ DFG       ++ 
Sbjct: 144 HRDLKPSNIL-----------------------YVDESGNPECLRICDFGFAKQLRAENG 180
Query: 277 YVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 333
            +++   T ++ APEV+   G++  CD+WS+G +L  + +G   F               
Sbjct: 181 LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN------------- 227
Query: 334 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 393
            GP        +D   E   R G+      G          W            V  +A 
Sbjct: 228 -GP--------SDTPEEILTRIGSGKFTLSGGN--------WNT----------VSETAK 260
Query: 394 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
           DL+     +L  DP +RL A++ L+HP+ T+  + P
Sbjct: 261 DLVS---KMLHVDPHQRLTAKQVLQHPWVTQKDKLP 293

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 29/230 (12%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           ++ +G+G FGQVV+  +       AIK +R   +     + E+ +L  L    +      
Sbjct: 11  IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 157 QIRNWFDYRNHI---------CIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
               W + RN +           +F ++      +LYD +   +      +  R L RQ+
Sbjct: 71  ----WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR-LFRQI 125
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
           LE+++++H   +IH DLKP NI +  +  VK+ D+             KN+ +S  I  +
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------KNVHRSLDILKL 175
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 312
           D  +      + +  + T  Y A EV+ G G +N   D++S+G I  E+ 
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    + P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 47  IKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 163
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 197
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 198 -TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ ++ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/336 (21%), Positives = 131/336 (38%), Gaps = 83/336 (24%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G++ +   C         A+K+   I+K +     EI++L R  +H       + ++
Sbjct: 35  IGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEIEILLRYGQH----PNIITLK 87
Query: 160 NWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLV-RELGRQLLESVAFMHELRLI 216
           + +D   H+ +V E +  G  L   LR+  +       V   +G+    +V ++H   ++
Sbjct: 88  DVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGK----TVEYLHSQGVV 143
Query: 217 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 276
           H DLKP NIL                       Y         +++ DFG       ++ 
Sbjct: 144 HRDLKPSNIL-----------------------YVDESGNPECLRICDFGFAKQLRAENG 180
Query: 277 YVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 333
            +++   T ++ APEV+   G++  CD+WS+G +L  + +G   F               
Sbjct: 181 LLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN------------- 227
Query: 334 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 393
            GP        +D   E   R G+      G          W            V  +A 
Sbjct: 228 -GP--------SDTPEEILTRIGSGKFTLSGGN--------WNT----------VSETAK 260
Query: 394 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
           DL+     +L  DP +RL A++ L+HP+ T+  + P
Sbjct: 261 DLV---SKMLHVDPHQRLTAKQVLQHPWVTQKDKLP 293

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 29/230 (12%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           ++ +G+G FGQVV+  +       AIK +R   +     + E+ +L  L    +      
Sbjct: 11  IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 157 QIRNWFDYRNHI---------CIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
               W + RN +           +F ++      +LYD +   +      +  R L RQ+
Sbjct: 71  ----WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR-LFRQI 125
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
           LE+++++H   +IH DLKP NI +  +  VK+ D+             KN+ +S  I  +
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------KNVHRSLDILKL 175
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELC 312
           D  +      + +  + T  Y A EV+ G G +N   D++S+G I  E+ 
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 49/228 (21%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI   ++K +   + +I+       H +   R +
Sbjct: 47  IKTLGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRIL 96
Query: 157 QIRNW---------FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q  N+         F   +++ +V E   G  ++  LR+    S P    R    Q++ +
Sbjct: 97  QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 154
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
             ++H L LI+ DLKPEN+++    Y+KV D+ F  R                      G
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--------------------G 194
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
            T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 195 RTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 75/344 (21%), Positives = 128/344 (37%), Gaps = 84/344 (24%)
Query: 86  IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL 145
           IGE +    K+ + +G+G+F  V           VAIK++     Y+ A M++  V   +
Sbjct: 6   IGEKIED-FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-AGMVQ-RVQNEV 62
Query: 146 ARH-DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
             H  +     +++ N+F+  N++ +V E       +   KN  + F  +  R    Q++
Sbjct: 63  KIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQII 122
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
             + ++H   ++H DL   N+LL                            ++  IK+ D
Sbjct: 123 TGMLYLHSHGILHRDLTLSNLLLT---------------------------RNMNIKIAD 155
Query: 265 FGSTT---FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
           FG  T     H+ H  +  T +Y +PE+          D+WS+GC+   L  G   F T 
Sbjct: 156 FGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT- 214
Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
                    + V   L  + V+ AD     +    A+                       
Sbjct: 215 ---------DTVKNTL--NKVVLADYEMPSFLSIEAK----------------------- 240
Query: 382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
                          DL+  LLR +PA+RL     L HPF +R+
Sbjct: 241 ---------------DLIHQLLRRNPADRLSLSSVLDHPFMSRN 269

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 37/231 (16%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIGGTRCVQ 157
           +G G  G+V++ F+   +E  A+K ++   K R     E+++  R ++  H +   R V 
Sbjct: 70  LGLGINGKVLQIFNKRTQEKFALKXLQDCPKARR----EVELHWRASQCPHIV---RIVD 122
Query: 158 I-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ ++H + +
Sbjct: 123 VYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINI 182
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STTFEHQ 273
            H D+KPEN+L  S    K P+                    + +KL DFG    T  H 
Sbjct: 183 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTSHN 218
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
             +    T +Y APEV+    ++  CD WS+G I   L  G   F ++  L
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGL 269

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 49/228 (21%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI   ++K +   + +I+       H +   R +
Sbjct: 47  IKTLGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRIL 96
Query: 157 QIRNW---------FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q  N+         F   +++ +V E   G  ++  LR+    S P    R    Q++ +
Sbjct: 97  QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 154
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
             ++H L LI+ DLKPEN+++    Y+KV D+ F  R                      G
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--------------------G 194
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
            T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 195 RTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 67  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H L L
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 183
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 217
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 218 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 39  IKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 97
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H L L
Sbjct: 98  KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 155
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 156 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 189
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 190 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 129/289 (44%), Gaps = 59/289 (20%)
Query: 48  GNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPR--CKILSKMGEGTF 105
           GN G+    C  +   ++P   S P +P +KD   +        PR   K+  K+G G F
Sbjct: 151 GNDGL----CQKL---SVPCMSSKPQKPWEKDAWEI--------PRESLKLEKKLGAGQF 195
Query: 106 GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165
           G+V     N K   VA+K ++  +   EA + E +V++ L +HD    + V++      +
Sbjct: 196 GEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHD----KLVKLHAVVT-K 248
Query: 166 NHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN 224
             I I+ E +   SL DFL+ +     P+  + +   Q+ E +AF+ +   IH DL+  N
Sbjct: 249 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAAN 308
Query: 225 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHY 284
           IL+ ++   K+ D+      ++ G+ F    K +A + I+FGS T +             
Sbjct: 309 ILVSASLVCKIADFGL----ARVGAKFP--IKWTAPEAINFGSFTIK------------- 349
Query: 285 RAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                          D+WS G +L+E+ + G   +    N E +  +ER
Sbjct: 350 --------------SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 384

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 41  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 99
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H L L
Sbjct: 100 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 157
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 158 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 191
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 192 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+++    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLIIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+I+  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 35/241 (14%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+GEG+ G V    +    + VA+K +    + R   +    V+ R   HD      V +
Sbjct: 52  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHD----NVVDM 107
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
            + +   + + +V E L G +L D +         I  V      +L +++++H   +IH
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATV---CLSVLRALSYLHNQGVIH 164
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            D+K ++ILL S   +K+ D+ F ++ SK+      +PK   +                 
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKE------VPKRKXL----------------- 201
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
            V T ++ APEVI  L +    D+WS+G +++E+  GE     + N   L  M R+   L
Sbjct: 202 -VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP---PYFNEPPLQAMRRIRDSL 257
Query: 338 P 338
           P
Sbjct: 258 P 258

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 132/344 (38%), Gaps = 85/344 (24%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
           E++   C+++   G+G F  V  C + E  +  A+KIV  + K+  +  +  + L+R A 
Sbjct: 25  EDVYELCEVI---GKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREAS 80
Query: 148 --HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQ 202
             H +     V++   +     + +VFE + G  L   + K +   F     +     RQ
Sbjct: 81  ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 140
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +LE++ + H+  +IH D+KP  +LL S E                         S+ +KL
Sbjct: 141 ILEALRYCHDNNIIHRDVKPHCVLLASKE------------------------NSAPVKL 176
Query: 263 IDFGSTTFEHQDHSYV----VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
             FG    +  +   V    V T H+ APEV+    +  P D+W  G IL  L S     
Sbjct: 177 GGFG-VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS----- 230
Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
                           G LP +                       G   R     +    
Sbjct: 231 ----------------GCLPFY-----------------------GTKERLFEGIIKGKY 251
Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           ++      H+  SA DL+   + +L  DPAER+   EAL HP+ 
Sbjct: 252 KMNPRQWSHISESAKDLV---RRMLMLDPAERITVYEALNHPWL 292

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E   G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+++    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLMIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y AP +IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 132/344 (38%), Gaps = 85/344 (24%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
           E++   C+++   G+G F  V  C + E  +  A+KIV  + K+  +  +  + L+R A 
Sbjct: 23  EDVYELCEVI---GKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREAS 78
Query: 148 --HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQ 202
             H +     V++   +     + +VFE + G  L   + K +   F     +     RQ
Sbjct: 79  ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +LE++ + H+  +IH D+KP  +LL S E                         S+ +KL
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVLLASKE------------------------NSAPVKL 174
Query: 263 IDFGSTTFEHQDHSYV----VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
             FG    +  +   V    V T H+ APEV+    +  P D+W  G IL  L S     
Sbjct: 175 GGFG-VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS----- 228
Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
                           G LP +                       G   R     +    
Sbjct: 229 ----------------GCLPFY-----------------------GTKERLFEGIIKGKY 249
Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           ++      H+  SA DL+   + +L  DPAER+   EAL HP+ 
Sbjct: 250 KMNPRQWSHISESAKDLV---RRMLMLDPAERITVYEALNHPWL 290

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 47  IKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H L L
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 163
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 197
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 198 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 39/224 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIGGTR 154
           L K+G+G+FG+V +  DN  +++VAIKI+         E    EI VL +     +    
Sbjct: 27  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVAFMH 211
              +++       + I+ E L G S  D L        P+D   +  + R++L+ + ++H
Sbjct: 87  GSYLKD-----TKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLH 136
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
             + IH D+K  N+LL     VK+ D+                           G  T  
Sbjct: 137 SEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLTDT 172
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
               +  V T  + APEVI    ++   D+WS+G   +EL  GE
Sbjct: 173 QIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 104/240 (43%), Gaps = 37/240 (15%)
Query: 86  IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL 145
           IG+ +  R KI+ K+G G    V    D      VAIK +    + +E      + L+R 
Sbjct: 5   IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKE------ETLKRF 58
Query: 146 AR--HDIGGTRCVQIRNWFDY-RNHIC--IVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
            R  H+        I +  D      C  +V E + GP+L +++   S+    +D     
Sbjct: 59  EREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE--SHGPLSVDTAINF 116
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
             Q+L+ +   H++R++H D+KP+NIL+ S + +K+ D+      S+             
Sbjct: 117 TNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE------------- 163
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
                   T+    +H  V+ T  Y +PE   G   +   D++S+G +L E+  GE  F 
Sbjct: 164 --------TSLTQTNH--VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E   G  ++  LR+     F     R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+++    Y+KV D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/337 (23%), Positives = 129/337 (38%), Gaps = 74/337 (21%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           +GEG + +V      +  +  A+KI+ +     R     E++ L +      G    +++
Sbjct: 21  LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQ----GNKNILEL 76
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
             +F+      +VFEKL G S+   ++K  +  F       + R +  ++ F+H   + H
Sbjct: 77  IEFFEDDTRFYLVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAALDFLHTKGIAH 134
Query: 218 TDLKPENILLVSAEY---VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
            DLKPENIL  S E    VK+ D+                   S +KL +   T     +
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDL----------------GSGMKL-NNSCTPITTPE 177
Query: 275 HSYVVSTRHYRAPEVI-----LGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
            +    +  Y APEV+         ++  CDLWS+G +L  + SG   F  H        
Sbjct: 178 LTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGH-------- 229
Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR-----LPNLI 384
                                     GA   W  G   R     +++ ++      P+  
Sbjct: 230 -------------------------CGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKD 264
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
             H+   A DLI     LL  D  +RL A + L+HP+
Sbjct: 265 WAHISSEAKDLIS---KLLVRDAKQRLSAAQVLQHPW 298

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 44/234 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA---------AMIEIDVLQRLAR 147
           +S +G G FG V    D EK + V +K ++      +            +EI +L R+  
Sbjct: 29  MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEH 88
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            +I     +++ + F+ +    +V EK G  L  F   + +      L   + RQL+ +V
Sbjct: 89  ANI-----IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAV 143
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
            ++    +IH D+K ENI++                            +   IKLIDFGS
Sbjct: 144 GYLRLKDIIHRDIKDENIVIA---------------------------EDFTIKLIDFGS 176
Query: 268 TTFEHQDHSYVV--STRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALF 318
             +  +   +     T  Y APEV++G  +  P  ++WS+G  L  L   E  F
Sbjct: 177 AAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 49/228 (21%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI   ++K +   + EI+       H +   R +
Sbjct: 46  IKTLGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKEIE-------HTLNEKRIL 95
Query: 157 QIRNW---------FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q  N+         F   +++ +V E   G  ++  LR+    S P    R    Q++ +
Sbjct: 96  QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 153
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
             ++H L LI+ DLKPEN+++    Y+KV D+    R                      G
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK--------------------G 193
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
            T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 194 RTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 44/239 (18%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G  G V    D    + VAI+ +    + ++  +I   ++ R  ++         I
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP-------NI 79
Query: 159 RNWFD---YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
            N+ D     + + +V E L G SL D + +       I  V    R+ L+++ F+H  +
Sbjct: 80  VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQ 136
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFE 271
           +IH D+K +NILL                   DGS          +KL DFG     T E
Sbjct: 137 VIHRDIKSDNILL-----------------GMDGS----------VKLTDFGFCAQITPE 169
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
               S +V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  L ++
Sbjct: 170 QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 44/239 (18%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G  G V    D    + VAI+ +    + ++  +I   ++ R  ++         I
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP-------NI 79
Query: 159 RNWFD---YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
            N+ D     + + +V E L G SL D + +       I  V    R+ L+++ F+H  +
Sbjct: 80  VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQ 136
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFE 271
           +IH D+K +NILL                   DGS          +KL DFG     T E
Sbjct: 137 VIHRDIKSDNILL-----------------GMDGS----------VKLTDFGFCAQITPE 169
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
               S +V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  L ++
Sbjct: 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 39/224 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIGGTR 154
           L K+G+G+FG+V +  DN  +++VAIKI+         E    EI VL +     +    
Sbjct: 12  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVAFMH 211
              +++       + I+ E L G S  D L        P+D   +  + R++L+ + ++H
Sbjct: 72  GSYLKD-----TKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLH 121
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
             + IH D+K  N+LL     VK+ D+                           G  T  
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLTDT 157
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
               +  V T  + APEVI    ++   D+WS+G   +EL  GE
Sbjct: 158 QIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 106/231 (45%), Gaps = 38/231 (16%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGGT 153
           +++  +G GT+GQV +    +  +L AIK++       E    EI++L++ + H +I   
Sbjct: 27  ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATY 86
Query: 154 RCVQIR-NWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               I+ N     + + +V E  G  S+ D ++     +   + +  + R++L  ++ +H
Sbjct: 87  YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 146
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
           + ++IH D+K +N+LL                            +++ +KL+DFG +   
Sbjct: 147 QHKVIHRDIKGQNVLLT---------------------------ENAEVKLVDFGVSAQL 179
Query: 272 HQD---HSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSG 314
            +     +  + T ++ APEVI         +++  DLWS+G   +E+  G
Sbjct: 180 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 39/224 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIGGTR 154
           L K+G+G+FG+V +  DN  +++VAIKI+         E    EI VL +     +    
Sbjct: 12  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVAFMH 211
              +++       + I+ E L G S  D L        P+D   +  + R++L+ + ++H
Sbjct: 72  GSYLKD-----TKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLH 121
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
             + IH D+K  N+LL     VK+ D+                           G  T  
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLTDT 157
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
               +  V T  + APEVI    ++   D+WS+G   +EL  GE
Sbjct: 158 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 44/224 (19%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G  G V    D    + VAI+ +    + ++  +I   ++ R  ++         I
Sbjct: 28  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP-------NI 80
Query: 159 RNWFD---YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
            N+ D     + + +V E L G SL D + +       I  V    R+ L+++ F+H  +
Sbjct: 81  VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQ 137
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFE 271
           +IH D+K +NILL                   DGS          +KL DFG     T E
Sbjct: 138 VIHRDIKSDNILL-----------------GMDGS----------VKLTDFGFCAQITPE 170
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
               S +V T ++ APEV+    +    D+WS+G + +E+  GE
Sbjct: 171 QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 49/228 (21%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI   ++K +   + +I+       H +   R +
Sbjct: 47  IKTLGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRIL 96
Query: 157 QIRNW---------FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q  N+         F   +++ +V E   G  ++  LR+     F     R    Q++ +
Sbjct: 97  QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFXEPHARFYAAQIVLT 154
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
             ++H L LI+ DLKPEN+++    Y+KV D+ F  R                      G
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--------------------G 194
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
            T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 195 RTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 44/239 (18%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G  G V    D    + VAI+ +    + ++  +I   ++ R  ++         I
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP-------NI 79
Query: 159 RNWFD---YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
            N+ D     + + +V E L G SL D + +       I  V    R+ L+++ F+H  +
Sbjct: 80  VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQ 136
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFE 271
           +IH D+K +NILL                   DGS          +KL DFG     T E
Sbjct: 137 VIHRDIKSDNILL-----------------GMDGS----------VKLTDFGFCAQITPE 169
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
               S +V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  L ++
Sbjct: 170 QSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 129/306 (42%), Gaps = 43/306 (14%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMI---EIDVLQRLARHDIG 151
           I   +GEG+FG+V      + ++ VA+K + R + K  +  M    EI  L +L RH   
Sbjct: 13  IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYL-KLLRH--- 68
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               +++ +       I +V E  G  L+D++ +   +    D  R   +Q++ ++ + H
Sbjct: 69  -PHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCH 125
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
             +++H DLKPEN+LL     VK+ D+  LS    DG++ K                   
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFG-LSNIMTDGNFLKT------------------ 166
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
                    + +Y APEVI G  +  P  D+WS G +L  +  G   F      E +  +
Sbjct: 167 ------SCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD----EFIPNL 216
Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI--MQHV 388
            + +    + M       A+   RR    D     T ++  R  W  + LP+ +  M+ V
Sbjct: 217 FKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEV 276
Query: 389 DHSAGD 394
             S  D
Sbjct: 277 QGSYAD 282

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLKPEN+L+    Y++V D+ F  R                      G T       
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------------GRTW------ 196
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             +  T    APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 197 -XLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 32/240 (13%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K+  K+G G FG+V     N K   VA+K ++  +   EA + E +V++ L +HD    +
Sbjct: 18  KLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHD----K 71
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V++      +  I I+ E +   SL DFL+ +     P+  + +   Q+ E +AF+ + 
Sbjct: 72  LVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 130
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+ ++   K+ D+  L+R  +D  Y         IK            
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFG-LARVIEDNEYTAREGAKFPIK------------ 177
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L+E+ + G   +    N E +  +ER
Sbjct: 178 ----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 227

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 45/227 (19%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIG--- 151
           L K+G+G+FG+V +  DN  +++VAIKI+         E    EI VL +     +    
Sbjct: 32  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVA 208
           G+     + W        I+ E L G S  D L        P+D   +  + R++L+ + 
Sbjct: 92  GSYLKDTKLW--------IIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLD 138
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++H  + IH D+K  N+LL     VK+ D+                           G  
Sbjct: 139 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQL 174
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
           T      +  V T  + APEVI    ++   D+WS+G   +EL  GE
Sbjct: 175 TDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 124/285 (43%), Gaps = 42/285 (14%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 26  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 84
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 85  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 138
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+      K+ D+  L+R  +D  Y         IK            
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------ 185
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 186 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 235
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
                  + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 236 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 273

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 49/228 (21%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI   ++K +   + EI+       H +   R +
Sbjct: 46  IKTLGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKEIE-------HTLNEKRIL 95
Query: 157 QIRNW---------FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q  N+         F   +++ +V E   G  ++  LR+    S P    R    Q++ +
Sbjct: 96  QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLT 153
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
             ++H L LI+ DLKPEN+++    Y++V D+    R                      G
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK--------------------G 193
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
            T         +  T  Y APE+IL  G+N   D W++G ++ E+ +G
Sbjct: 194 RTW-------XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 124/285 (43%), Gaps = 42/285 (14%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 21  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 79
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 80  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+      K+ D+  L+R  +D  Y         IK            
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------ 180
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 181 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 230
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
                  + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 231 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 268

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 124/285 (43%), Gaps = 42/285 (14%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 22  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 81  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+      K+ D+  L+R  +D  Y         IK            
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------ 181
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 182 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
                  + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 232 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 269

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 124/285 (43%), Gaps = 42/285 (14%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 75  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+      K+ D+  L+R  +D  Y         IK            
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------ 175
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
                  + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 226 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 263

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 96/234 (41%), Gaps = 36/234 (15%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           R +++  +G G FG      D +  ELVA+K +    K  E    EI +  R  RH    
Sbjct: 20  RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREI-INHRSLRH---- 74
Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V+ +       H+ IV E   G  L++  R  +   F  D  R   +QL+  V++ H
Sbjct: 75  PNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYAH 132
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STT 269
            +++ H DLK EN LL                   DGS       +  +K+ DFG    +
Sbjct: 133 AMQVAHRDLKLENTLL-------------------DGS------PAPRLKIADFGYSKAS 167
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 322
             H      V T  Y APEV+L   ++    D+WS G  L  +  G   F+  E
Sbjct: 168 VLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 124/285 (43%), Gaps = 42/285 (14%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 11  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 69
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 70  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 123
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+      K+ D+  L+R  +D  Y         IK            
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------ 170
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 171 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 220
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
                  + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 221 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 258

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 44/224 (19%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G  G V    D    + VAI+ +    + ++  +I   ++ R  ++         I
Sbjct: 28  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP-------NI 80
Query: 159 RNWFD---YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
            N+ D     + + +V E L G SL D + +       I  V    R+ L+++ F+H  +
Sbjct: 81  VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHSNQ 137
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFE 271
           +IH ++K +NILL                   DGS          +KL DFG     T E
Sbjct: 138 VIHRNIKSDNILL-----------------GMDGS----------VKLTDFGFCAQITPE 170
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
               S +V T ++ APEV+    +    D+WS+G + +E+  GE
Sbjct: 171 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 97/234 (41%), Gaps = 36/234 (15%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           R +++  +G G FG      D +  ELVA+K +    K  E    EI +  R  RH    
Sbjct: 19  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRH---- 73
Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V+ +       H+ IV E   G  L++  R  +   F  D  R   +QL+  V++ H
Sbjct: 74  PNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCH 131
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STT 269
            +++ H DLK EN LL                   DGS       +  +K+ DFG   ++
Sbjct: 132 AMQVCHRDLKLENTLL-------------------DGS------PAPRLKICDFGYSKSS 166
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 322
             H      V T  Y APEV+L   ++    D+WS G  L  +  G   F+  E
Sbjct: 167 VLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 220

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 29/228 (12%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           ++ +G+G FGQVV+  +       AIK +R   +     + E+ +L  L    +      
Sbjct: 11  IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAA 70
Query: 157 QIRNWFDYRNHI---------CIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
               W + RN +           +F +       +LYD +   +      +  R L RQ+
Sbjct: 71  ----WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR-LFRQI 125
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
           LE+++++H   +IH +LKP NI +  +  VK+ D+             KN+ +S  I  +
Sbjct: 126 LEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA----------KNVHRSLDILKL 175
Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVE 310
           D  +      + +  + T  Y A EV+ G G +N   D +S+G I  E
Sbjct: 176 DSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 131/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 69
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 126
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S   +L          
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTEL---------- 166
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 167 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 221 VEFTFP------------DFVTEGAR---------------------------------- 234
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 235 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 131/327 (40%), Gaps = 79/327 (24%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+GEG+ G V    +      VA+K++    + R   +    V+ R  +H       V++
Sbjct: 52  KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH----FNVVEM 107
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
              +     + ++ E L G +L D + +       I  V E    +L+++A++H   +IH
Sbjct: 108 YKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCE---AVLQALAYLHAQGVIH 164
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            D+K ++ILL     VK+ D+ F ++ SKD      +PK   +                 
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKD------VPKRKXL----------------- 201
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPL 337
            V T ++ APEVI    +    D+WS+G +++E+  GE                      
Sbjct: 202 -VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP--------------------- 239
Query: 338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID 397
                         YF             S   ++A+ +L   P   +++    +  L D
Sbjct: 240 -------------PYF-------------SDSPVQAMKRLRDSPPPKLKNSHKVSPVLRD 273
Query: 398 LLQGLLRYDPAERLKAREALRHPFFTR 424
            L+ +L  DP ER  A+E L HPF  +
Sbjct: 274 FLERMLVRDPQERATAQELLDHPFLLQ 300

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G+FG++    + +  E VAIK+     K+ +  + E  + + L     GGT    +
Sbjct: 14  KIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQL-LYESKIYRILQ----GGTGIPNV 68
Query: 159 RNWFDYR-NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
           R WF    ++  +V + LGPSL D     S R   +  V  L  Q++  V F+H    +H
Sbjct: 69  R-WFGVEGDYNVLVMDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLH 126
Query: 218 TDLKPENILLV---SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
            D+KP+N L+     A  V + D+  L++  +D S  +++P                +++
Sbjct: 127 RDIKPDNFLMGLGRRANQVYIIDFG-LAKKYRDTSTHQHIP----------------YRE 169
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
           +  +  T  Y +    LG+  +   DL S+G +L+    G   +Q
Sbjct: 170 NKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 214

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 69
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 126
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---------- 166
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 167 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 221 VEFTFP------------DFVTEGAR---------------------------------- 234
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 235 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 20  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 73
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 130
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 131 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---------- 170
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 171 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 224
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 225 VEFTFP------------DFVTEGAR---------------------------------- 238
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 239 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 272

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/339 (22%), Positives = 129/339 (38%), Gaps = 94/339 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 42  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 95
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 96  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 152
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE 271
            R+IH D+KPEN+LL SA                             +K+ DFG S    
Sbjct: 153 KRVIHRDIKPENLLLGSA---------------------------GELKIADFGWSVHAP 185
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
               + +  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + 
Sbjct: 186 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 245
Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
           RV    P             +   GAR                                 
Sbjct: 246 RVEFTFP------------DFVTEGAR--------------------------------- 260
Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 261 -----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 294

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 74
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 131
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---------- 171
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 172 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 226 VEFTFP------------DFVTEGAR---------------------------------- 239
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 240 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 129/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 74
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 131
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---------- 171
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 172 ------CGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 226 VEFTFP------------DFVTEGAR---------------------------------- 239
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 240 ----DLISRLLKHNPSQRPXLREVLEHPWITANSSKPS 273

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 70
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 71  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 127
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+ +   +          P S    L          
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSCHA----------PSSRRTTL---------- 167
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 168 ------SGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 222 VEFTFP------------DFVTEGAR---------------------------------- 235
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 236 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 74
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 75  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 131
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTDL---------- 171
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 172 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 226 VEFTFP------------DFVTEGAR---------------------------------- 239
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 240 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 72
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 129
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRAAL---------- 169
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 170 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 224 VEFTFP------------DFVTEGAR---------------------------------- 237
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 238 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 15  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 68
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 69  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 125
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---------- 165
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 166 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 219
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 220 VEFTFP------------DFVTEGAR---------------------------------- 233
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 234 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 267

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 72
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 129
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---------- 169
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 170 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 224 VEFTFP------------DFVTEGAR---------------------------------- 237
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 238 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 42/285 (14%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 12  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 70
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 71  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 124
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH +L+  NIL+      K+ D+  L+R  +D  Y         IK            
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIK------------ 171
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 172 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 221
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
                  + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 222 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 259

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 69
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 126
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTXL---------- 166
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 167 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 221 VEFTFP------------DFVTEGAR---------------------------------- 234
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 235 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 70
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 71  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 127
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTDL---------- 167
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 168 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 222 VEFTFP------------DFVTEGAR---------------------------------- 235
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 236 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 33  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 86
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 87  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 143
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 144 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---------- 183
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 184 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 237
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 238 VEFTFP------------DFVTEGAR---------------------------------- 251
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 252 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 285

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 69
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 126
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTDL---------- 166
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 167 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 221 VEFTFP------------DFVTEGAR---------------------------------- 234
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 235 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 69
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 126
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTDL---------- 166
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 167 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 221 VEFTFP------------DFVTEGAR---------------------------------- 234
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 235 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 103/226 (45%), Gaps = 36/226 (15%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +IL  +G+G+FG+V     N+ K++ A+K    +NK +     E+  + +  +   G   
Sbjct: 18  EILRAIGKGSFGKVCIVQKNDTKKMYAMKY---MNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 155 CVQIRNWFDYRNH---ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              +  W+ +++      +V   LG  L   L++N +  F  + V+    +L+ ++ ++ 
Sbjct: 75  PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKLFICELVMALDYLQ 132
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
             R+IH D+KP+NILL    +V + D+   +           LP+ + I           
Sbjct: 133 NQRIIHRDMKPDNILLDEHGHVHITDFNIAAM----------LPRETQI----------- 171
Query: 272 HQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSG 314
               + +  T+ Y APE+     G G+++  D WS+G    EL  G
Sbjct: 172 ----TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 18  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 71
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 72  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 128
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRXXL---------- 168
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 169 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 222
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 223 VEFTFP------------DFVTEGAR---------------------------------- 236
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 237 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 69
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 126
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRXXL---------- 166
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 167 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 221 VEFTFP------------DFVTEGAR---------------------------------- 234
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 235 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 41/232 (17%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQ 157
           +G G FG V E  +       AIK +R  N+   RE  M E+  L +L    I     V+
Sbjct: 13  LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI-----VR 67
Query: 158 IRNWFDYRNHICIVFEKLGPS---LYDFLRKNSYRSFPID-------LVRELGR------ 201
             N +  +N      EKL PS   +Y +++    R   +         + E  R      
Sbjct: 68  YFNAWLEKNTT----EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 202 --QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
             Q+ E+V F+H   L+H DLKP NI     + VKV D+  ++   +D      L    A
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                       +  H+  V T+ Y +PE I G  +++  D++S+G IL EL
Sbjct: 184 ------------YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 16  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 69
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 126
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRAAL---------- 166
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 167 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 220
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 221 VEFTFP------------DFVTEGAR---------------------------------- 234
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 235 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 96/234 (41%), Gaps = 36/234 (15%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           R +++  +G G FG      D +  ELVA+K +    K       EI +  R  RH    
Sbjct: 20  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREI-INHRSLRH---- 74
Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V+ +       H+ IV E   G  L++  R  +   F  D  R   +QL+  V++ H
Sbjct: 75  PNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STT 269
            +++ H DLK EN LL                   DGS       +  +K+ DFG   ++
Sbjct: 133 AMQVCHRDLKLENTLL-------------------DGS------PAPRLKICDFGYSKSS 167
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 322
             H      V T  Y APEV+L   ++    D+WS G  L  +  G   F+  E
Sbjct: 168 VLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 128/338 (37%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   P   +Y  L+K S   F          +L  ++++ H 
Sbjct: 75  ILRLYGYFHDATRVYLILE-YAPRGEVYKELQKLS--KFDEQRTATYITELANALSYCHS 131
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---------- 171
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 172 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 226 VEFTFP------------DFVTEGAR---------------------------------- 239
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 240 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 101/248 (40%), Gaps = 37/248 (14%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           R   +  +G G FG      D   KELVA+K +       E    EI +  R  RH    
Sbjct: 21  RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREI-INHRSLRH---- 75
Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V+ +       H+ I+ E   G  LY+  R  +   F  D  R   +QLL  V++ H
Sbjct: 76  PNIVRFKEVILTPTHLAIIMEYASGGELYE--RICNAGRFSEDEARFFFQQLLSGVSYCH 133
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STT 269
            +++ H DLK EN LL                   DGS       +  +K+ DFG   ++
Sbjct: 134 SMQICHRDLKLENTLL-------------------DGS------PAPRLKICDFGYSKSS 168
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQT-HENLEHL 327
             H      V T  Y APEV+L   ++    D+WS G  L  +  G   F+   E  ++ 
Sbjct: 169 VLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYR 228
Query: 328 AMMERVLG 335
             ++R+L 
Sbjct: 229 KTIQRILS 236

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 42  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 95
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 96  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 152
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRDDL---------- 192
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 193 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 246
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 247 VEFTFP------------DFVTEGAR---------------------------------- 260
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 261 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 294

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/339 (22%), Positives = 128/339 (37%), Gaps = 94/339 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 17  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 70
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 71  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 127
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE 271
            R+IH D+KPEN+LL SA                             +K+ DFG S    
Sbjct: 128 KRVIHRDIKPENLLLGSA---------------------------GELKIADFGWSVHAP 160
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
                 +  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + 
Sbjct: 161 SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
           RV    P             +   GAR                                 
Sbjct: 221 RVEFTFP------------DFVTEGAR--------------------------------- 235
Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 236 -----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 72
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 129
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRDDL---------- 169
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 170 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 224 VEFTFP------------DFVTEGAR---------------------------------- 237
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 238 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +IL  +G G+FG+V            A+K+++     R    +E    +RL    +    
Sbjct: 9   QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR-LKQVEHTNDERLMLSIVTHPF 67
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            +++   F     I ++ + + G  L+  LRK+  + FP  + +    ++  ++ ++H  
Sbjct: 68  IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSK 125
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
            +I+ DLKPENILL                            K+  IK+ DFG   +   
Sbjct: 126 DIIYRDLKPENILL---------------------------DKNGHIKITDFGFAKYVPD 158
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
               +  T  Y APEV+    +N   D WS G ++ E+ +G   F
Sbjct: 159 VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 40/250 (16%)
Query: 86  IGENLTPRCK-----ILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA--M 136
           +G +  P  K      L  +G+G+FG+V+      ++   A+K++  ++I K +E    M
Sbjct: 27  LGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIM 86
Query: 137 IEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDL 195
            E +VL +  +H       V +   F   + +  V + + G  L+  L++   R F    
Sbjct: 87  SERNVLLKNVKHPF----LVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPR 140
Query: 196 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 255
            R    ++  ++ ++H L +++ DLKPENILL S  ++ + D+     +           
Sbjct: 141 ARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN----------- 189
Query: 256 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
                  I+  STT      S    T  Y APEV+    ++   D W +G +L E+  G 
Sbjct: 190 -------IEHNSTT------STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 236
Query: 316 ALFQTHENLE 325
             F +    E
Sbjct: 237 PPFYSRNTAE 246

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 25  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 83
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 84  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 137
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+      K+ D+  L+R  +D            IK            
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------ 184
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 185 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 234
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
                  + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 235 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 272

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 130/335 (38%), Gaps = 82/335 (24%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV-LQRLARHDIGG 152
           ++  ++G+G F  V  C      +  A KI+ +     R+   +E +  + RL +H    
Sbjct: 25  QLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKH---- 80
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++ +      H  ++F+ + G  L++ +    Y S   D    + +Q+LE+V   H
Sbjct: 81  PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-EADASHCI-QQILEAVLHCH 138
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---ST 268
           ++ ++H DLKPEN+LL S                          K +A+KL DFG     
Sbjct: 139 QMGVVHRDLKPENLLLASK------------------------LKGAAVKLADFGLAIEV 174
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
             E Q       T  Y +PEV+    +  P DLW+ G IL  L  G   F   +      
Sbjct: 175 EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ----- 229
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
                              R  +  + GA  D+P            W             
Sbjct: 230 ------------------HRLYQQIKAGA-YDFPSPE---------W------------- 248
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
           D    +  DL+  +L  +P++R+ A EAL+HP+ +
Sbjct: 249 DTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 283

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 24  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 82
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 83  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+      K+ D+  L+R  +D            IK            
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------ 183
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 184 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 233
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
                  + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 234 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 271

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 22  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 81  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+      K+ D+  L+R  +D            IK            
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------ 181
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 182 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
                  + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 232 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 269

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 75  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+      K+ D+  L+R  +D            IK            
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------ 175
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
                  + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 226 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 263

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 128/338 (37%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 21  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   P   +Y  L+K S   F          +L  ++++ H 
Sbjct: 75  ILRLYGYFHDATRVYLILE-YAPRGEVYKELQKLS--KFDEQRTATYITELANALSYCHS 131
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRXXL---------- 171
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 172 ------XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 226 VEFTFP------------DFVTEGAR---------------------------------- 239
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 240 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 37/240 (15%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +I+  +G G FG+V        + + A+KI   +NK+      E     R  R  +    
Sbjct: 93  EIIKVIGRGAFGEVAVVKMKNTERIYAMKI---LNKWEMLKRAETACF-REERDVLVNGD 148
Query: 155 CVQIRNW---FDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           C  I      F   NH+ +V +  +G  L   L K   +  P D+ R    +++ ++  +
Sbjct: 149 CQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSI 207
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H+L  +H D+KP+N+LL    ++++ D+                   S +K+ D G+   
Sbjct: 208 HQLHYVHRDIKPDNVLLDVNGHIRLADF------------------GSCLKMNDDGTVQ- 248
Query: 271 EHQDHSYVVSTRHYRAPEVIL----GLGWNYP-CDLWSVGCILVELCSGEALFQTHENLE 325
                S  V T  Y +PE++     G+G   P CD WS+G  + E+  GE  F     +E
Sbjct: 249 ----SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 304

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 18  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 76
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 77  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 130
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+      K+ D+  L+R  +D            IK            
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------ 177
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 178 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 227
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
                  + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 228 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 265

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 94/232 (40%), Gaps = 32/232 (13%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           R +++  +G G FG      D +  ELVA+K +    K  E    EI +  R  RH    
Sbjct: 20  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRH---- 74
Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V+ +       H+ IV E   G  L++  R  +   F  D  R   +QL+  V++ H
Sbjct: 75  PNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
            +++ H DLK EN LL  +     P  K  +      S   + PKS+             
Sbjct: 133 AMQVCHRDLKLENTLLDGS---PAPRLKICAFGYSKSSVLHSQPKST------------- 176
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 322
                  V T  Y APEV+L   ++    D+WS G  L  +  G   F+  E
Sbjct: 177 -------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 37/240 (15%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +I+  +G G FG+V        + + A+KI   +NK+      E     R  R  +    
Sbjct: 77  EIIKVIGRGAFGEVAVVKMKNTERIYAMKI---LNKWEMLKRAETACF-REERDVLVNGD 132
Query: 155 CVQIRNW---FDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           C  I      F   NH+ +V +  +G  L   L K   +  P D+ R    +++ ++  +
Sbjct: 133 CQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSI 191
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H+L  +H D+KP+N+LL    ++++ D+                   S +K+ D G+   
Sbjct: 192 HQLHYVHRDIKPDNVLLDVNGHIRLADF------------------GSCLKMNDDGTVQ- 232
Query: 271 EHQDHSYVVSTRHYRAPEVIL----GLGWNYP-CDLWSVGCILVELCSGEALFQTHENLE 325
                S  V T  Y +PE++     G+G   P CD WS+G  + E+  GE  F     +E
Sbjct: 233 ----SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/330 (21%), Positives = 124/330 (37%), Gaps = 85/330 (25%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G++     C         A+KI   I+K +     EI++L R  +H       + ++
Sbjct: 30  IGVGSYSVCKRCIHKATNMEFAVKI---IDKSKRDPTEEIEILLRYGQH----PNIITLK 82
Query: 160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLL---ESVAFMHELRL 215
           + +D   ++ +V E + G  L D + +  + S      RE    L    ++V ++H   +
Sbjct: 83  DVYDDGKYVYVVTELMKGGELLDKILRQKFFS-----EREASAVLFTITKTVEYLHAQGV 137
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           +H DLKP NIL                       Y        +I++ DFG       ++
Sbjct: 138 VHRDLKPSNIL-----------------------YVDESGNPESIRICDFGFAKQLRAEN 174
Query: 276 SYVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
             +++   T ++ APEV+   G++  CD+WS+G +L  + +G   F              
Sbjct: 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN------------ 222
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
             GP         D   E+   R     +       +S+    K                
Sbjct: 223 --GP---------DDTPEEILARIGSGKFSLSGGYWNSVSDTAK---------------- 255
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFF 422
               DL+  +L  DP +RL A   LRHP+ 
Sbjct: 256 ----DLVSKMLHVDPHQRLTAALVLRHPWI 281

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 105/250 (42%), Gaps = 40/250 (16%)
Query: 96  ILSKM-GEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDI 150
           IL KM G+G+FG+V      +  +  AIK ++     ++   E  M+E  VL     H  
Sbjct: 20  ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF 79
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                  +   F  + ++  V E L  G  +Y      S   F +        +++  + 
Sbjct: 80  ----LTHMFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAAEIILGLQ 132
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           F+H   +++ DLK +NILL    ++K+ D+         G   +N+       L D  + 
Sbjct: 133 FLHSKGIVYRDLKLDNILLDKDGHIKIADF---------GMCKENM-------LGDAKTN 176
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEH 326
            F          T  Y APE++LG  +N+  D WS G +L E+  G++ F  Q  E L H
Sbjct: 177 XF--------CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 228
Query: 327 LAMMERVLGP 336
              M+    P
Sbjct: 229 SIRMDNPFYP 238

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 110/275 (40%), Gaps = 31/275 (11%)
Query: 88  ENLTPRC----KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQ 143
           E + P C    ++L K G G   QV +       ++ A+K+++     R A        +
Sbjct: 12  EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           R    ++     V +   F     + ++ E L G  L+  L +     F  D       +
Sbjct: 72  RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAE 129
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +  ++  +H+  +I+ DLKPENI+L    +VK+ D+     S  DG+             
Sbjct: 130 ISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV------------ 177
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
                       H++   T  Y APE+++  G N   D WS+G ++ ++ +G   F    
Sbjct: 178 -----------THTF-CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGA 357
             + +  + +    LP ++   A    +K  +R A
Sbjct: 226 RKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNA 260

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 75  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+      K+ D+  L+R  +D            IK            
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------ 175
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
                  + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 226 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 263

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 17  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 75
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 76  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 129
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+      K+ D+  L+R  +D            IK            
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIK------------ 176
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 177 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 226
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
                  + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 227 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 264

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 72
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 129
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ ++           +  + P S    L          
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANF----------GWSVHAPSSRRTTL---------- 169
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 170 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 224 VEFTFP------------DFVTEGAR---------------------------------- 237
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 238 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/338 (22%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 18  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 71
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 72  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 128
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ ++           +  + P S    L          
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANF----------GWSVHAPSSRRTTL---------- 168
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 169 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 222
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 223 VEFTFP------------DFVTEGAR---------------------------------- 236
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 237 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 96/234 (41%), Gaps = 36/234 (15%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           R +++  +G G FG      D +  ELVA+K +    K  E    EI +  R  RH    
Sbjct: 20  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRH---- 74
Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V+ +       H+ IV E   G  L++  R  +   F  D  R   +QL+  V++ H
Sbjct: 75  PNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--STT 269
            +++ H DLK EN LL                   DGS       +  +K+  FG   ++
Sbjct: 133 AMQVCHRDLKLENTLL-------------------DGS------PAPRLKICAFGYSKSS 167
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHE 322
             H      V T  Y APEV+L   ++    D+WS G  L  +  G   F+  E
Sbjct: 168 VLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNG-CLLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                    + 
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-----------------AN 192
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           +F        V T  Y +PE++     +   DLW++GCI+ +L +G
Sbjct: 193 SF--------VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 104/247 (42%), Gaps = 50/247 (20%)
Query: 78  KDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI 137
           K GHY+  +G+ L          G GTFG+V           VA+KI+    K R   ++
Sbjct: 14  KIGHYI--LGDTL----------GVGTFGKVKVGKHELTGHKVAVKILNR-QKIRSLDVV 60
Query: 138 -----EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSF 191
                EI  L +L RH       +++       + I +V E + G  L+D++ KN     
Sbjct: 61  GKIRREIQNL-KLFRH----PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG--RL 113
Query: 192 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251
                R L +Q+L  V + H   ++H DLKPEN+LL +    K+ D+  LS    DG + 
Sbjct: 114 DEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG-LSNMMSDGEFL 172
Query: 252 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
           +             GS  +   +   V+S R Y  PEV          D+WS G IL  L
Sbjct: 173 RX----------SCGSPNYAAPE---VISGRLYAGPEV----------DIWSSGVILYAL 209
Query: 312 CSGEALF 318
             G   F
Sbjct: 210 LCGTLPF 216

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 109/275 (39%), Gaps = 31/275 (11%)
Query: 88  ENLTPRC----KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQ 143
           E + P C    ++L K G G   QV +       ++ A+K+++     R A        +
Sbjct: 12  EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           R    ++     V +   F     + ++ E L G  L+  L +     F  D       +
Sbjct: 72  RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAE 129
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +  ++  +H+  +I+ DLKPENI+L    +VK+ D+     S  DG+             
Sbjct: 130 ISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV------------ 177
Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
                       H +   T  Y APE+++  G N   D WS+G ++ ++ +G   F    
Sbjct: 178 -----------THXF-CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGA 357
             + +  + +    LP ++   A    +K  +R A
Sbjct: 226 RKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNA 260

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                      
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 190
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  +  V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 191 ------ANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 43/243 (17%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           +G+GT+G V    D   +  +AIK I    ++Y +    EI + + L   +I     VQ 
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI-----VQY 84
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPI-DLVRELG---RQLLESVAFMHEL 213
              F     I I  E++ G SL   LR    +  P+ D  + +G   +Q+LE + ++H+ 
Sbjct: 85  LGSFSENGFIKIFMEQVPGGSLSALLRS---KWGPLKDNEQTIGFYTKQILEGLKYLHDN 141
Query: 214 RLIHTDLKPENILLVSAEYV-KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
           +++H D+K +N+L+ +   V K+ D+    R                +  I+  + TF  
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKR----------------LAGINPCTETF-- 183
Query: 273 QDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
                   T  Y APE+I     G+    D+WS+GC ++E+ +G+  F  +E  E  A M
Sbjct: 184 ------TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF--YELGEPQAAM 235
Query: 331 ERV 333
            +V
Sbjct: 236 FKV 238

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 102/245 (41%), Gaps = 39/245 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V      +  +  AIK ++     ++   E  M+E  VL     H       
Sbjct: 26  LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF----L 81
Query: 156 VQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             +   F  + ++  V E L  G  +Y      S   F +        +++  + F+H  
Sbjct: 82  THMFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAAEIILGLQFLHSK 138
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
            +++ DLK +NILL    ++K+ D+         G   +N+       L D  +  F   
Sbjct: 139 GIVYRDLKLDNILLDKDGHIKIADF---------GMCKENM-------LGDAKTNEF--- 179
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMME 331
                  T  Y APE++LG  +N+  D WS G +L E+  G++ F  Q  E L H   M+
Sbjct: 180 -----CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD 234
Query: 332 RVLGP 336
               P
Sbjct: 235 NPFYP 239

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 41/219 (18%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G FG V  C    + + VAIK + S ++ R+A ++E+  L R+   +I       ++
Sbjct: 17  VGRGAFGVV--CKAKWRAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNI-------VK 66
Query: 160 NWFDYRNHICIVFEKL-GPSLYDFLR-KNSYRSFPIDLVRELGRQLLESVAFMHELR--- 214
            +    N +C+V E   G SLY+ L        +          Q  + VA++H ++   
Sbjct: 67  LYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           LIH DLKP N+LLV+                            + +K+ DFG+       
Sbjct: 127 LIHRDLKPPNLLLVAG--------------------------GTVLKICDFGTACDIQTH 160
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
            +    +  + APEV  G  ++  CD++S G IL E+ +
Sbjct: 161 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT 199

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 43/243 (17%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           +G+GT+G V    D   +  +AIK I    ++Y +    EI + + L   +I     VQ 
Sbjct: 16  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI-----VQY 70
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPI-DLVRELG---RQLLESVAFMHEL 213
              F     I I  E++ G SL   LR    +  P+ D  + +G   +Q+LE + ++H+ 
Sbjct: 71  LGSFSENGFIKIFMEQVPGGSLSALLRS---KWGPLKDNEQTIGFYTKQILEGLKYLHDN 127
Query: 214 RLIHTDLKPENILLVSAEYV-KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
           +++H D+K +N+L+ +   V K+ D+                  S  +  I+  + TF  
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFG----------------TSKRLAGINPCTETF-- 169
Query: 273 QDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
                   T  Y APE+I     G+    D+WS+GC ++E+ +G+  F  +E  E  A M
Sbjct: 170 ------TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF--YELGEPQAAM 221
Query: 331 ERV 333
            +V
Sbjct: 222 FKV 224

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 73/340 (21%), Positives = 125/340 (36%), Gaps = 92/340 (27%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLARHDIG 151
           I+  +G+G FG V    + + K ++A+K++      +E        EI++   L   +I 
Sbjct: 18  IVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNI- 76
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
               +++ N+F  R  I ++ E   P   LY  L+K+    F          +L +++ +
Sbjct: 77  ----LRMYNYFHDRKRIYLMLE-FAPRGELYKELQKHG--RFDEQRSATFMEELADALHY 129
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 268
            HE ++IH D+KPEN+L+          YK                    +K+ DFG S 
Sbjct: 130 CHERKVIHRDIKPENLLM---------GYK------------------GELKIADFGWSV 162
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
                    +  T  Y  PE+I G   +   DLW  G +  E   G   F +  + E   
Sbjct: 163 HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE--- 219
Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
                     H  ++  D +   +   G++                              
Sbjct: 220 ---------THRRIVNVDLKFPPFLSDGSK------------------------------ 240
Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
                   DL+  LLRY P +RL  +  + HP+   + RR
Sbjct: 241 --------DLISKLLRYHPPQRLPLKGVMEHPWVKANSRR 272

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 41/219 (18%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G FG V  C    + + VAIK + S ++ R+A ++E+  L R+   +I       ++
Sbjct: 16  VGRGAFGVV--CKAKWRAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNI-------VK 65
Query: 160 NWFDYRNHICIVFEKL-GPSLYDFLR-KNSYRSFPIDLVRELGRQLLESVAFMHELR--- 214
            +    N +C+V E   G SLY+ L        +          Q  + VA++H ++   
Sbjct: 66  LYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           LIH DLKP N+LLV+                            + +K+ DFG+       
Sbjct: 126 LIHRDLKPPNLLLVAG--------------------------GTVLKICDFGTACDIQTH 159
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
            +    +  + APEV  G  ++  CD++S G IL E+ +
Sbjct: 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT 198

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 108/256 (42%), Gaps = 68/256 (26%)
Query: 78  KDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI 137
           K GHYV                +G GTFG+V           VA+KI+    K R     
Sbjct: 9   KIGHYVLG------------DTLGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRS---- 51
Query: 138 EIDVLQRLARHDIGGTRCVQIRNWFDYRN-HICIVFEKL--------------GPSLYDF 182
            +DV+ ++ R         +I+N   +R+ HI  +++ +              G  L+D+
Sbjct: 52  -LDVVGKIKR---------EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDY 101
Query: 183 LRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242
           + K+  R   ++  R L +Q+L +V + H   ++H DLKPEN+LL +    K+ D+  LS
Sbjct: 102 ICKHG-RVEEME-ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG-LS 158
Query: 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLW 302
               DG + ++            GS  +   +   V+S R Y  PEV          D+W
Sbjct: 159 NMMSDGEFLRD----------SCGSPNYAAPE---VISGRLYAGPEV----------DIW 195
Query: 303 SVGCILVELCSGEALF 318
           S G IL  L  G   F
Sbjct: 196 SCGVILYALLCGTLPF 211

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 41  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 93
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 94  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 150
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                    + 
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-----------------AN 193
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           +F        V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 194 SF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 90
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK         +++A         
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA-------RANAF-------- 192
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                     V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 193 ----------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/333 (22%), Positives = 128/333 (38%), Gaps = 92/333 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + ++K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 13  LGKGKFGNVYLAREKQRKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 66
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 67  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 123
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---------- 163
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 164 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 217
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 218 VEFTFP------------DFVTEGAR---------------------------------- 231
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
               DL+  LL+++P++R   RE L HP+ T +
Sbjct: 232 ----DLISRLLKHNPSQRPMLREVLEHPWITAN 260

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 44/232 (18%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++   +G G++     C         A+KI   I+K +     EI++L R  +H      
Sbjct: 25  EVKEDIGVGSYSVCKRCIHKATNXEFAVKI---IDKSKRDPTEEIEILLRYGQH----PN 77
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL---ESVAF 209
            + +++ +D   ++ +V E  K G  L   LR+  +        RE    L    ++V +
Sbjct: 78  IITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSE------REASAVLFTITKTVEY 131
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H   ++H DLKP NIL                       Y        +I++ DFG   
Sbjct: 132 LHAQGVVHRDLKPSNIL-----------------------YVDESGNPESIRICDFGFAK 168
Query: 270 FEHQDHSYVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
               ++  + +   T ++ APEV+   G++  CD+WS+G +L    +G   F
Sbjct: 169 QLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 127/342 (37%), Gaps = 82/342 (23%)
Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV-LQRLA 146
           ++T   ++  ++G+G F  V  C      +  A KI+ +     R+   +E +  + RL 
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +H       V++ +         +VF+ + G  L++ +    Y S          +Q+LE
Sbjct: 61  KH----PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD--ASHCIQQILE 114
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           SV   H   ++H DLKPEN+LL S                          K +A+KL DF
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKS------------------------KGAAVKLADF 150
Query: 266 GSTTFEHQDHSY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
           G       D         T  Y +PEV+    +  P D+W+ G IL  L  G   F   +
Sbjct: 151 GLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDED 210
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
                                    R  +  + GA  D+P            W       
Sbjct: 211 Q-----------------------HRLYQQIKAGA-YDFPSPE---------W------- 230
Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
                 D    +  DL+  +L  +PA+R+ A EAL+HP+  +
Sbjct: 231 ------DTVTPEAKDLINKMLTINPAKRITASEALKHPWICQ 266

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 107/256 (41%), Gaps = 68/256 (26%)
Query: 78  KDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI 137
           K GHYV                +G GTFG+V           VA+KI+    K R     
Sbjct: 9   KIGHYVLG------------DTLGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRS---- 51
Query: 138 EIDVLQRLARHDIGGTRCVQIRNWFDYRN-HICIVFEKL--------------GPSLYDF 182
            +DV+ ++ R         +I+N   +R+ HI  +++ +              G  L+D+
Sbjct: 52  -LDVVGKIKR---------EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDY 101
Query: 183 LRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242
           + K+  R   ++  R L +Q+L +V + H   ++H DLKPEN+LL +    K+ D+  LS
Sbjct: 102 ICKHG-RVEEME-ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG-LS 158
Query: 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLW 302
               DG + +             GS  +   +   V+S R Y  PEV          D+W
Sbjct: 159 NMMSDGEFLRT----------SCGSPNYAAPE---VISGRLYAGPEV----------DIW 195
Query: 303 SVGCILVELCSGEALF 318
           S G IL  L  G   F
Sbjct: 196 SCGVILYALLCGTLPF 211

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 41  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 93
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 94  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 150
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                      
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 191
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  +  V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 192 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                      
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 190
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  +  V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 191 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/342 (23%), Positives = 129/342 (37%), Gaps = 82/342 (23%)
Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV-LQRLA 146
           ++T   ++  ++G+G F  V  C      +  A KI+ +     R+   +E +  + RL 
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +H       V++ +         +VF+ + G  L++ +    Y S   D    + +Q+LE
Sbjct: 61  KH----PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI-QQILE 114
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           SV   H   ++H DLKPEN+LL S                          K +A+KL DF
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKS------------------------KGAAVKLADF 150
Query: 266 GSTTFEHQDHSY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
           G       D         T  Y +PEV+    +  P D+W+ G IL  L  G   F   +
Sbjct: 151 GLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDED 210
Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
                                    R  +  + GA  D+P            W       
Sbjct: 211 Q-----------------------HRLYQQIKAGA-YDFPSPE---------W------- 230
Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
                 D    +  DL+  +L  +PA+R+ A EAL+HP+  +
Sbjct: 231 ------DTVTPEAKDLINKMLTINPAKRITASEALKHPWICQ 266

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 274 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 327
Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+  + +   +  + ++  Q+   +A++  +  +H
Sbjct: 328 YAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 386
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D  Y         IK                
Sbjct: 387 RDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK---------------- 429
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 430 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                      
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 190
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  +  V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 191 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                      
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 190
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  +  V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 191 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                      
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 190
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  +  V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 191 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 43  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 95
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 96  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 152
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                      
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 193
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  +  V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 194 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 130/338 (38%), Gaps = 92/338 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    +   K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 16  LGKGKFGNVYLAREKNSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 69
Query: 155 CVQIRNWF--DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F    R ++ + +  LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 70  ILRLYGYFHDSTRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 126
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            ++IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRAAL---------- 166
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   +    + R
Sbjct: 167 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISR 220
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 221 VEFTFP------------DFVTEGAR---------------------------------- 234
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
               DL+  LL+++P++R   RE L HP+ T +  +P+
Sbjct: 235 ----DLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 90
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                      
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 188
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  +  V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 189 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 90
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                      
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 188
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  +  V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 189 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++  N   EA + E  V+++L RH+    + VQ+
Sbjct: 192 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMSPEAFLQEAQVMKKL-RHE----KLVQL 245
Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 246 YAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 304
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L R  +D  Y         IK                
Sbjct: 305 RDLRAANILVGENLVCKVADFG-LGRLIEDNEYTARQGAKFPIK---------------- 347
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 348 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 397

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 18  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF----- 72
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 73  --VKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 127
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                      
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 168
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  +  V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 169 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 34/241 (14%)
Query: 95  KILSKMGEGTFGQV-VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           +++ ++G G FG+V +  ++   K  VAIK ++      E+ + E  ++++L +HD    
Sbjct: 12  QLIKRLGNGQFGEVWMGTWNGNTK--VAIKTLKPGTMSPESFLEEAQIMKKL-KHD---- 64
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
           + VQ+         I IV E +   SL DFL+    R+  +  + ++  Q+   +A++  
Sbjct: 65  KLVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER 123
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
           +  IH DL+  NIL+ +    K+ D+  L+R  +D            IK           
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADFG-LARLIEDNEXTARQGAKFPIK----------- 171
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMME 331
                      + APE  L   +    D+WS G +L EL + G   +    N E L  +E
Sbjct: 172 -----------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE 220
Query: 332 R 332
           R
Sbjct: 221 R 221

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 17  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF----- 71
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 72  --VKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 126
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                      
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 167
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  +  V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 168 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/333 (22%), Positives = 127/333 (38%), Gaps = 92/333 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 72
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 129
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRTTL---------- 169
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 170 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 224 VEFTFP------------DFVTEGAR---------------------------------- 237
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
               DL+  LL+++P++R   RE L HP+ T +
Sbjct: 238 ----DLISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 33/224 (14%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 73  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 128
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
           ++   R IH DL   NIL+ +   VK+ D+       +D  +FK   P  S I       
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI------- 181
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                           + APE +    ++   D+WS G +L EL
Sbjct: 182 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 210

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 15  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 67
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 68  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 124
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                      
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 165
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  +  V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 166 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/336 (21%), Positives = 123/336 (36%), Gaps = 92/336 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLARHDIGGTRC 155
           +G+G FG V    + + K ++A+K++      +E        EI++   L   +I     
Sbjct: 23  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNI----- 77
Query: 156 VQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
           +++ N+F  R  I ++ E   P   LY  L+K+    F          +L +++ + HE 
Sbjct: 78  LRMYNYFHDRKRIYLMLE-FAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER 134
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 272
           ++IH D+KPEN+L+          YK                    +K+ DFG S     
Sbjct: 135 KVIHRDIKPENLLM---------GYK------------------GELKIADFGWSVHAPS 167
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                +  T  Y  PE+I G   +   DLW  G +  E   G   F +  + E       
Sbjct: 168 LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------- 220
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                 H  ++  D +   +   G++                                  
Sbjct: 221 -----THRRIVNVDLKFPPFLSDGSK---------------------------------- 241
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
               DL+  LLRY P +RL  +  + HP+   + RR
Sbjct: 242 ----DLISKLLRYHPPQRLPLKGVMEHPWVKANSRR 273

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKY----REAAMIEIDVLQRLARHDIGGTRC 155
           +G+G FG+V  C      ++ A K +             A+ E  +L+++    +     
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFV----- 246
Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V +   ++ ++ +C+V   + G  L   +       FP         ++   +  +H  R
Sbjct: 247 VSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER 306
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +++ DLKPENILL    ++++ D               ++P+   IK             
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAV----------HVPEGQTIK------------- 343
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 334
               V T  Y APEV+    + +  D W++GC+L E+ +G++ FQ  +       +ER++
Sbjct: 344 --GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV 401
Query: 335 GPLPHHMVIRADRRA 349
             +P     R   +A
Sbjct: 402 KEVPEEYSERFSPQA 416

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 16  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 68
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 69  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 125
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                      
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 166
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  +  V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 167 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 37  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 89
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 90  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 146
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                    + 
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-----------------AN 189
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           +F        V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 190 SF--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKY----REAAMIEIDVLQRLARHDIGGTRC 155
           +G+G FG+V  C      ++ A K +             A+ E  +L+++    +     
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFV----- 246
Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V +   ++ ++ +C+V   + G  L   +       FP         ++   +  +H  R
Sbjct: 247 VSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER 306
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +++ DLKPENILL    ++++ D               ++P+   IK             
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAV----------HVPEGQTIK------------- 343
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 334
               V T  Y APEV+    + +  D W++GC+L E+ +G++ FQ  +       +ER++
Sbjct: 344 --GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV 401
Query: 335 GPLPHHMVIRADRRA 349
             +P     R   +A
Sbjct: 402 KEVPEEYSERFSPQA 416

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 130/340 (38%), Gaps = 82/340 (24%)
Query: 90  LTPRCKILSKMGEGTFGQVVECFDN-EKKELVAIKIVRSINKYREAAMIEIDV-LQRLAR 147
            T   ++  ++G+G F  V  C      +E  A+ I       R+   +E +  + RL +
Sbjct: 9   FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK 68
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           H       V++ +      H  ++F+ + G  L++ +    Y S   D    + +Q+LE+
Sbjct: 69  H----PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-EADASHCI-QQILEA 122
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           V   H++ ++H +LKPEN+LL S                          K +A+KL DFG
Sbjct: 123 VLHCHQMGVVHRNLKPENLLLASK------------------------LKGAAVKLADFG 158
Query: 267 ---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
                  E Q       T  Y +PEV+    +  P DLW+ G IL  L  G   F   + 
Sbjct: 159 LAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ 218
Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
                                   R  +  + GA  D+P            W        
Sbjct: 219 -----------------------HRLYQQIKAGA-YDFPSPE---------W-------- 237
Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                D    +  DL+  +L  +P++R+ A EAL+HP+ +
Sbjct: 238 -----DTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 272

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 40/223 (17%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLAR-HDIGGTR 154
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL     +    
Sbjct: 45  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 104
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           C Q     D + +  + + K G  L  ++RK    SF     R    +++ ++ ++H   
Sbjct: 105 CFQD----DEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 157
Query: 215 LIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
           +IH DLKPENILL    ++++ D+   K LS  SK                         
Sbjct: 158 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR---------------------- 195
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
               +  V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 196 ---ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/333 (22%), Positives = 127/333 (38%), Gaps = 92/333 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 19  LGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH----PN 72
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANALSYCHS 129
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            R+IH D+KPEN+LL SA  +K+ D+           +  + P S    L          
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADF----------GWSVHAPSSRRXXL---------- 169
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                   T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E    + R
Sbjct: 170 ------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 223
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           V    P             +   GAR                                  
Sbjct: 224 VEFTFP------------DFVTEGAR---------------------------------- 237
Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
               DL+  LL+++P++R   RE L HP+ T +
Sbjct: 238 ----DLISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 113/267 (42%), Gaps = 61/267 (22%)
Query: 85  AIGENLTPRC---KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEID- 140
           A+G +  P     ++L  +G+G F +V              K+ R I   RE A+  ID 
Sbjct: 2   AMGSDEQPHIGNYRLLKTIGKGNFAKV--------------KLARHILTGREVAIKIIDK 47
Query: 141 ------VLQRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSY 188
                  LQ+L R       +     V++    +    + ++ E   G  ++D+L   ++
Sbjct: 48  TQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV--AH 105
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
                   R   RQ++ +V + H+ R++H DLK EN+LL +   +K+ D+ F +  +  G
Sbjct: 106 GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 165
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCI 307
                       KL  F               +  Y APE+  G  ++ P  D+WS+G I
Sbjct: 166 ------------KLDTF-------------CGSPPYAAPELFQGKKYDGPEVDVWSLGVI 200
Query: 308 LVELCSGEALFQTHENLEHLAMMERVL 334
           L  L SG   F   +NL+ L   ERVL
Sbjct: 201 LYTLVSGSLPFDG-QNLKELR--ERVL 224

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 41/223 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSINKYREAAMIEIDVLQRLARHDIGG 152
           L ++G G+FG V    D    E+VAIK +    +  N+  +  + E+  LQ+L RH    
Sbjct: 59  LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RH---- 113
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              +Q R  +   +   +V E    S  D L  +      +++   +    L+ +A++H 
Sbjct: 114 PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHS 172
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
             +IH D+K  NIL                           L +   +KL DFGS +   
Sbjct: 173 HNMIHRDVKAGNIL---------------------------LSEPGLVKLGDFGSASIMA 205
Query: 273 QDHSYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELC 312
             + + V T ++ APEVIL +    ++   D+WS+G   +EL 
Sbjct: 206 PANXF-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 37  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 89
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 90  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 146
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                      
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 187
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  +  V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 188 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 18  KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 71
Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+  + +   +  + ++  Q+   +A++  +  +H
Sbjct: 72  YAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 130
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D  Y         IK                
Sbjct: 131 RDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK---------------- 173
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 174 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 223

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 22  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 74
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 75  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 131
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                      
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 172
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  +  V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 173 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 244
Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+  + +   +  + ++  Q+   +A++  +  +H
Sbjct: 245 YAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D  Y         IK                
Sbjct: 304 RDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK---------------- 346
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 347 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 122/285 (42%), Gaps = 42/285 (14%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ ++G G  G+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 16  KLVERLGAGQAGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 75  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+      K+ D+  L+R  +D            IK            
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDAEXTAREGAKFPIK------------ 175
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                     + APE I    +    D+WS G +L E+ + G   +    N E +  +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDW---PDGATSRDSMRAV 374
                  + ++R D   E+ ++   RL W   P+   + D +R+V
Sbjct: 226 ------GYRMVRPDNCPEELYQL-MRLCWKERPEDRPTFDYLRSV 263

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 244
Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+  + +   +  + ++  Q+   +A++  +  +H
Sbjct: 245 YAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D  Y         IK                
Sbjct: 304 RDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK---------------- 346
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 347 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 38/236 (16%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA-----MIEIDVLQRLARHDIG 151
           LS++G G++G+V +    E   L A+K  RS++ +R        + E+   +++ +H   
Sbjct: 62  LSRLGHGSYGEVFKVRSKEDGRLYAVK--RSMSPFRGPKDRARKLAEVGSHEKVGQHPC- 118
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              CV++   ++    + +  E  GPSL          S P   V    R  L ++A +H
Sbjct: 119 ---CVRLEQAWEEGGILYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLH 174
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
              L+H D+KP NI L      K+ D+  L                  ++L   G+   +
Sbjct: 175 SQGLVHLDVKPANIFLGPRGRCKLGDFGLL------------------VELGTAGAGEVQ 216
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
             D  Y+       APE++ G  +    D++S+G  ++E+     L    E  + L
Sbjct: 217 EGDPRYM-------APELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 244
Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+  + +   +  + ++  Q+   +A++  +  +H
Sbjct: 245 YAVVS-EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D  Y         IK                
Sbjct: 304 RDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK---------------- 346
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 347 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 22  KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 75
Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+  + +   +  + ++  Q+   +A++  +  +H
Sbjct: 76  YAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVH 134
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D  Y         IK                
Sbjct: 135 RDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK---------------- 177
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 178 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+ E+V F+H   L+H DLKP NI     + VKV D+  ++   +D      L    A  
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA-- 229
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                     +  H   V T+ Y +PE I G  +++  D++S+G IL EL
Sbjct: 230 ----------YATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 100/236 (42%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 25  KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 78
Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 79  YAVVS-EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D  Y         IK                
Sbjct: 138 RDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK---------------- 180
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 44/266 (16%)
Query: 98  SKMGEGTFGQV-VECFDNEKKELVAIKI----VRSINKYREAAMIEIDVLQRLARHDIGG 152
           + +G G++G+V +      +    A KI    V  ++++++    EI++++ L   +I  
Sbjct: 15  NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQ----EIEIMKSLDHPNI-- 68
Query: 153 TRCVQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              +++   F+    I +V E   G  L++  R    R F       + + +L +VA+ H
Sbjct: 69  ---IRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLSAVAYCH 123
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF 270
           +L + H DLKPEN L ++      PD                    S +KLIDFG +  F
Sbjct: 124 KLNVAHRDLKPENFLFLTDS----PD--------------------SPLKLIDFGLAARF 159
Query: 271 EHQDHSYV-VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
           +        V T +Y +P+V+ GL +   CD WS G ++  L  G   F    + E +  
Sbjct: 160 KPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLK 218
Query: 330 MERVLGPLPHHMVIRADRRAEKYFRR 355
           +       P    +    +AE   RR
Sbjct: 219 IREGTFTFPEKDWLNVSPQAESLIRR 244

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 105/242 (43%), Gaps = 41/242 (16%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQRLARHDI 150
           +IL  +G G FG+V         ++ A+KI+      + A       E DVL        
Sbjct: 77  EILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN------ 130
Query: 151 GGTRCVQIRNW-FDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           G ++ +   ++ F   N++ +V +  +G  L   L K   R  P ++ R    +++ ++ 
Sbjct: 131 GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAID 189
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
            +H+L  +H D+KP+NIL+    ++++ D+                   S +KL++ G+ 
Sbjct: 190 SVHQLHYVHRDIKPDNILMDMNGHIRLADF------------------GSCLKLMEDGTV 231
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALFQTHEN 323
                  S  V T  Y +PE++  +      +   CD WS+G  + E+  GE  F     
Sbjct: 232 -----QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 286
Query: 324 LE 325
           +E
Sbjct: 287 VE 288

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 44/266 (16%)
Query: 98  SKMGEGTFGQV-VECFDNEKKELVAIKI----VRSINKYREAAMIEIDVLQRLARHDIGG 152
           + +G G++G+V +      +    A KI    V  ++++++    EI++++ L   +I  
Sbjct: 32  NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQ----EIEIMKSLDHPNI-- 85
Query: 153 TRCVQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              +++   F+    I +V E   G  L++  R    R F       + + +L +VA+ H
Sbjct: 86  ---IRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLSAVAYCH 140
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF 270
           +L + H DLKPEN L ++      PD                    S +KLIDFG +  F
Sbjct: 141 KLNVAHRDLKPENFLFLTDS----PD--------------------SPLKLIDFGLAARF 176
Query: 271 EHQDHSYV-VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
           +        V T +Y +P+V+ GL +   CD WS G ++  L  G   F    + E +  
Sbjct: 177 KPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLK 235
Query: 330 MERVLGPLPHHMVIRADRRAEKYFRR 355
           +       P    +    +AE   RR
Sbjct: 236 IREGTFTFPEKDWLNVSPQAESLIRR 261

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 91/381 (23%), Positives = 150/381 (39%), Gaps = 67/381 (17%)
Query: 78  KDGHYVFAIGENLTPRCKILSKMGEGTFGQV---VECFDNEKKELVAIK-IVRSINKYRE 133
           KD   ++     L+   KI  K+GEGTF  V           +E +A+K ++ + +  R 
Sbjct: 7   KDIEKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRI 66
Query: 134 AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFP 192
           AA  E+  L      D      + ++  F   +H+ I    L   S  D L   S++   
Sbjct: 67  AA--ELQCLTVAGGQD----NVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQE-- 118
Query: 193 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
              VRE    L +++  +H+  ++H D+KP N L       ++  Y  +      G++  
Sbjct: 119 ---VREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNR----RLKKYALVDFGLAQGTH-- 169
Query: 253 NLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRH----------YRAPEVILGL-GWN 296
                + I+L+ F  +  + +       S  +S R           +RAPEV+       
Sbjct: 170 ----DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQT 225
Query: 297 YPCDLWSVGCILVELCSGE-ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 355
              D+WS G I + L SG    ++  ++L  LA +          M IR  R   +  + 
Sbjct: 226 TAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQI----------MTIRGSRETIQAAKT 275
Query: 356 GARLDWPDGATSRDSMRAVWKLLR--------LPNLIMQHVDHSAG------DLIDLLQG 401
             +            +R + + LR        L + I  H  +  G      +  DLL  
Sbjct: 276 FGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDK 335
Query: 402 LLRYDPAERLKAREALRHPFF 422
           LL  +PA R+ A EAL HPFF
Sbjct: 336 LLDLNPASRITAEEALLHPFF 356

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 97/237 (40%), Gaps = 36/237 (15%)
Query: 84  FAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV- 141
            A     T   ++  ++G+G F  V  C      +  A KI+ +     R+   +E +  
Sbjct: 23  MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR 82
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELG 200
           + RL +H       V++ +         +VF+ + G  L++ +    Y S   D    + 
Sbjct: 83  ICRLLKH----PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI- 136
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            Q+LESV  +H+  ++H DLKPEN+LL S                          K +A+
Sbjct: 137 HQILESVNHIHQHDIVHRDLKPENLLLASK------------------------CKGAAV 172
Query: 261 KLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           KL DFG       E Q       T  Y +PEV+    +  P D+W+ G IL  L  G
Sbjct: 173 KLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 41/223 (18%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSINKYREAAMIEIDVLQRLARHDIGG 152
           L ++G G+FG V    D    E+VAIK +    +  N+  +  + E+  LQ+L RH    
Sbjct: 20  LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RH---- 74
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              +Q R  +   +   +V E    S  D L  +      +++   +    L+ +A++H 
Sbjct: 75  PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHS 133
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
             +IH D+K  NIL                           L +   +KL DFGS +   
Sbjct: 134 HNMIHRDVKAGNIL---------------------------LSEPGLVKLGDFGSASIMA 166
Query: 273 QDHSYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELC 312
             + + V T ++ APEVIL +    ++   D+WS+G   +EL 
Sbjct: 167 PANXF-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 136/342 (39%), Gaps = 59/342 (17%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR 154
           +S++G G  G V +        ++A K++    K   R   + E+ VL     H+     
Sbjct: 21  ISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPY 75
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL- 213
            V     F     I I  E +     D + K + R  P +++ ++   +L  +A++ E  
Sbjct: 76  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR-IPEEILGKVSIAVLRGLAYLREKH 134
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           +++H D+KP NIL+ S   +K+ D+                    + +LID  + +F   
Sbjct: 135 QIMHRDVKPSNILVNSRGEIKLCDFGV------------------SGQLIDSMANSF--- 173
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER- 332
                V TR Y APE + G  ++   D+WS+G  LVEL  G       +  E  A+  R 
Sbjct: 174 -----VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRP 228
Query: 333 -VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL---------RLPN 382
            V G       I    R       G  +D      SR +M A+++LL         +LPN
Sbjct: 229 VVDGEEGEPHSISPRPRPPGRPVSGHGMD------SRPAM-AIFELLDYIVNEPPPKLPN 281
Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
            +         D  + +   L  +PAER   +    H F  R
Sbjct: 282 GVF------TPDFQEFVNKCLIKNPAERADLKMLTNHTFIKR 317

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 104/248 (41%), Gaps = 48/248 (19%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT--RCV 156
           ++G G F  V +C      +  A K ++   K R       ++L  +A  ++  +  R +
Sbjct: 36  ELGRGKFAVVRQCISKSTGQEYAAKFLK---KRRRGQDCRAEILHEIAVLELAKSCPRVI 92
Query: 157 QIRNWFDYRNHICIVFEKLG---------PSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            +   ++  + I ++ E            P L + + +N       D++R L +Q+LE V
Sbjct: 93  NLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEN-------DVIR-LIKQILEGV 144
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 266
            ++H+  ++H DLKP+NILL S                        +     IK++DFG 
Sbjct: 145 YYLHQNNIVHLDLKPQNILLSS------------------------IYPLGDIKIVDFGM 180
Query: 267 STTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
           S    H  +   ++ T  Y APE++         D+W++G I   L +  + F   +N E
Sbjct: 181 SRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE 240
Query: 326 HLAMMERV 333
               + +V
Sbjct: 241 TYLNISQV 248

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 46/226 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F   V   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 38  LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 90
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
              +IH DLKPENILL    ++++ D+   K LS  SK                      
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------------- 188
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  +  V T  Y +PE++         DLW++GCI+ +L +G
Sbjct: 189 ------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 38/226 (16%)
Query: 95  KILSKMGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-R 147
           K +  +GEG FG+V + C+D   +   E+VA+K +++    ++R     EID+L+ L   
Sbjct: 17  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLE 205
           H I    C + +   +    + + +  LG SL D+L ++S     I L + L   +Q+ E
Sbjct: 77  HIIKYKGCCEDQG--EKSLQLVMEYVPLG-SLRDYLPRHS-----IGLAQLLLFAQQICE 128
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
            +A++H    IH +L   N+LL +   VK+ D+  L+++  +G  +  + +       D 
Sbjct: 129 GMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE-------DG 180
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
            S  F             + APE +    + Y  D+WS G  L EL
Sbjct: 181 DSPVF-------------WYAPECLKEYKFYYASDVWSFGVTLYEL 213

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 38/226 (16%)
Query: 95  KILSKMGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-R 147
           K +  +GEG FG+V + C+D   +   E+VA+K +++    ++R     EID+L+ L   
Sbjct: 17  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLE 205
           H I    C + +   +    + + +  LG SL D+L ++S     I L + L   +Q+ E
Sbjct: 77  HIIKYKGCCEDQG--EKSLQLVMEYVPLG-SLRDYLPRHS-----IGLAQLLLFAQQICE 128
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
            +A++H    IH +L   N+LL +   VK+ D+  L+++  +G  +  + +       D 
Sbjct: 129 GMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE-------DG 180
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
            S  F             + APE +    + Y  D+WS G  L EL
Sbjct: 181 DSPVF-------------WYAPECLKEYKFYYASDVWSFGVTLYEL 213

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/229 (21%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEID--VLQRLARHD-- 149
           +L  +G G++ +V+     +   + A+K+V+   +N   +   ++ +  V ++ + H   
Sbjct: 13  LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 72
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           +G   C Q  +    R    I +   G  ++   R+   R  P +  R    ++  ++ +
Sbjct: 73  VGLHSCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNY 125
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +HE  +I+ DLK +N+LL S  ++K+ DY       +                   G TT
Sbjct: 126 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP------------------GDTT 167
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
                 S    T +Y APE++ G  + +  D W++G ++ E+ +G + F
Sbjct: 168 ------SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 100/236 (42%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 25  KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 78
Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 79  YAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D  Y         IK                
Sbjct: 138 RDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK---------------- 180
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 33/224 (14%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 14  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 74  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 129
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
           ++   R IH +L   NIL+ +   VK+ D+       +D  Y+K   P  S I       
Sbjct: 130 YLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI------- 182
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                           + APE +    ++   D+WS G +L EL
Sbjct: 183 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 211

>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 26/230 (11%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           R ++  K+G G+FG +    D    E VAIK+     K+ +     + +  ++ +   GG
Sbjct: 8   RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ-----LHIESKIYKMMQGG 62
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
                IR      ++  +V E LGPSL D     S R F +  V  L  Q++  + ++H 
Sbjct: 63  VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS 121
Query: 213 LRLIHTDLKPENILL---VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
              IH D+KP+N L+        V + D+  L++  +D    +++P              
Sbjct: 122 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFG-LAKKYRDARTHQHIP-------------- 166
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
             ++++  +  T  Y +    LG+  +   DL S+G +L+    G   +Q
Sbjct: 167 --YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 214

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 100/236 (42%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 25  KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 78
Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 79  YAVVS-EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D  Y         IK                
Sbjct: 138 RDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK---------------- 180
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 100/236 (42%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 14  KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 67
Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 68  YAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 126
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D  Y         IK                
Sbjct: 127 RDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK---------------- 169
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 170 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 219

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 38/228 (16%)
Query: 95  KILSKMGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-R 147
           K +  +GEG FG+V + C+D   +   E+VA+K +++    ++R     EID+L+ L   
Sbjct: 34  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLE 205
           H I    C +       +  + + +  LG SL D+L ++S     I L + L   +Q+ E
Sbjct: 94  HIIKYKGCCEDAGAASLQ--LVMEYVPLG-SLRDYLPRHS-----IGLAQLLLFAQQICE 145
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
            +A++H    IH DL   N+LL +   VK+ D+  L+++  +G     + +       D 
Sbjct: 146 GMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFG-LAKAVPEGHEXYRVRE-------DG 197
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
            S  F             + APE +    + Y  D+WS G  L EL +
Sbjct: 198 DSPVF-------------WYAPECLKEYKFYYASDVWSFGVTLYELLT 232

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 36/258 (13%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L +MG GT GQV +    +   ++A+K +R      E   I +D+   L  HD      V
Sbjct: 30  LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDC--PYIV 87
Query: 157 QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR-L 215
           Q    F     + I  E +G +  + L+K      P  ++ ++   +++++ ++ E   +
Sbjct: 88  QCFGTFITNTDVFIAMELMG-TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGV 146
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           IH D+KP NILL     +K+ D+    R   D                       + +D 
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVDD-----------------------KAKDR 183
Query: 276 SYVVSTRHYRAPEVI-----LGLGWNYPCDLWSVGCILVELCSGEALFQT-HENLEHLAM 329
           S   +   Y APE I         ++   D+WS+G  LVEL +G+  ++    + E L  
Sbjct: 184 SAGCAA--YMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTK 241
Query: 330 MERVLGP-LPHHMVIRAD 346
           + +   P LP HM    D
Sbjct: 242 VLQEEPPLLPGHMGFSGD 259

>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 26/230 (11%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           R ++  K+G G+FG +    D    E VAIK+     K+ +     + +  ++ +   GG
Sbjct: 10  RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ-----LHIESKIYKMMQGG 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
                IR      ++  +V E LGPSL D     S R F +  V  L  Q++  + ++H 
Sbjct: 65  VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS 123
Query: 213 LRLIHTDLKPENILL---VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
              IH D+KP+N L+        V + D+  L++  +D    +++P              
Sbjct: 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFG-LAKKYRDARTHQHIP-------------- 168
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
             ++++  +  T  Y +    LG+  +   DL S+G +L+    G   +Q
Sbjct: 169 --YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 100/236 (42%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 16  KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 69
Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 70  YAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 128
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D  Y         IK                
Sbjct: 129 RDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK---------------- 171
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 172 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 221

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/229 (21%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEID--VLQRLARHD-- 149
           +L  +G G++ +V+     +   + A+K+V+   +N   +   ++ +  V ++ + H   
Sbjct: 9   LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 68
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           +G   C Q  +    R    I +   G  ++   R+   R  P +  R    ++  ++ +
Sbjct: 69  VGLHSCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNY 121
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +HE  +I+ DLK +N+LL S  ++K+ DY       +                   G TT
Sbjct: 122 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP------------------GDTT 163
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
                 S    T +Y APE++ G  + +  D W++G ++ E+ +G + F
Sbjct: 164 ------SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 51/236 (21%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGG 152
           K L ++G G +G V +       +++A+K +RS    K ++  ++++DV+ R        
Sbjct: 25  KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMR-------S 77
Query: 153 TRCVQIRNWFD--YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE--LGRQLLESVA 208
           + C  I  ++   +R   C +  +L  + +D   K  Y S   D++ E  LG+  L +V 
Sbjct: 78  SDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVY-SVLDDVIPEEILGKITLATVK 136
Query: 209 FMH----ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
            ++     L++IH D+KP NILL                            +S  IKL D
Sbjct: 137 ALNHLKENLKIIHRDIKPSNILL---------------------------DRSGNIKLCD 169
Query: 265 FGST--TFEHQDHSYVVSTRHYRAPEVI----LGLGWNYPCDLWSVGCILVELCSG 314
           FG +    +    +     R Y APE I       G++   D+WS+G  L EL +G
Sbjct: 170 FGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG 225

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG+V    D +     A+K VR +  +R   +        +A   +   R V +
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAEEL--------MACAGLTSPRIVPL 150
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    + I  E L G SL   +++      P D       Q LE + ++H  R++H
Sbjct: 151 YGAVREGPWVNIFMELLEGGSLGQLVKEQG--CLPEDRALYYLGQALEGLEYLHSRRILH 208
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-- 275
            D+K +N+LL                 S DGS+           L DFG       D   
Sbjct: 209 GDVKADNVLL-----------------SSDGSH---------AALCDFGHAVCLQPDGLG 242
Query: 276 ------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  Y+  T  + APEV+LG   +   D+WS  C+++ + +G
Sbjct: 243 KSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/229 (21%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEID--VLQRLARHD-- 149
           +L  +G G++ +V+     +   + A+K+V+   +N   +   ++ +  V ++ + H   
Sbjct: 24  LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 83
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           +G   C Q  +    R    I +   G  ++   R+   R  P +  R    ++  ++ +
Sbjct: 84  VGLHSCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNY 136
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +HE  +I+ DLK +N+LL S  ++K+ DY       +                   G TT
Sbjct: 137 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP------------------GDTT 178
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
                 S    T +Y APE++ G  + +  D W++G ++ E+ +G + F
Sbjct: 179 ------SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG+V    D +     A+K VR +  +R   +        +A   +   R V +
Sbjct: 81  RLGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAEEL--------MACAGLTSPRIVPL 131
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    + I  E L G SL   +++      P D       Q LE + ++H  R++H
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLVKEQG--CLPEDRALYYLGQALEGLEYLHSRRILH 189
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-- 275
            D+K +N+LL                 S DGS+           L DFG       D   
Sbjct: 190 GDVKADNVLL-----------------SSDGSH---------AALCDFGHAVCLQPDGLG 223
Query: 276 ------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  Y+  T  + APEV+LG   +   D+WS  C+++ + +G
Sbjct: 224 KDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 4   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E++ P   L+DF+ +    +   +L R 
Sbjct: 64  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERG--ALQEELARS 118
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 119 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 153
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 154 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 212
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 213 PFEHDEEI 220

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 25  KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 78
Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 79  YAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL   NIL+      KV D+  L+R  +D  Y         IK                
Sbjct: 138 RDLAAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK---------------- 180
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 94/230 (40%), Gaps = 47/230 (20%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
           +  ++G+G F  V  C         A KI+ +    ++ +  +   L+R AR       C
Sbjct: 33  VKEELGKGAFSVVRRCVHKTTGLEFAAKIINT----KKLSARDFQKLEREAR------IC 82
Query: 156 VQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG---------RQLLES 206
            ++++    R H  I  E     ++D +       F   + RE           +Q+LES
Sbjct: 83  RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILES 140
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           +A+ H   ++H +LKPEN+LL S                          K +A+KL DFG
Sbjct: 141 IAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAVKLADFG 176
Query: 267 STTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                +   ++     T  Y +PEV+    ++ P D+W+ G IL  L  G
Sbjct: 177 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V++++ RH+    + VQ+
Sbjct: 25  KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKI-RHE----KLVQL 78
Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 79  YAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D  Y         IK                
Sbjct: 138 RDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK---------------- 180
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 107/254 (42%), Gaps = 58/254 (22%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEID-------VLQRLAR 147
           ++L  +G+G F +V              K+ R I   RE A+  ID        LQ+L R
Sbjct: 18  RLLKTIGKGNFAKV--------------KLARHILTGREVAIKIIDKTQLNPTSLQKLFR 63
Query: 148 H-----DIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
                  +     V++    +    + ++ E   G  ++D+L   ++        R   R
Sbjct: 64  EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV--AHGRMKEKEARSKFR 121
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q++ +V + H+ R++H DLK EN+LL +   +K+ D+ F +  +  G            K
Sbjct: 122 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG------------K 169
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQT 320
           L  F                  Y APE+  G  ++ P  D+WS+G IL  L SG   F  
Sbjct: 170 LDAF-------------CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
Query: 321 HENLEHLAMMERVL 334
            +NL+ L   ERVL
Sbjct: 217 -QNLKELR--ERVL 227

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 22  KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 75
Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+  + +   +  + ++  Q+   +A++  +  +H
Sbjct: 76  YAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVH 134
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D  +         IK                
Sbjct: 135 RDLRAANILVGENLVCKVADFG-LARLIEDNEWTARQGAKFPIK---------------- 177
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 178 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 126/339 (37%), Gaps = 94/339 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 20  LGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVEIQSHLRH----PN 73
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--RFDEQRTATYITELANALSYCHS 130
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE 271
            R+IH D+KPEN+LL S                           +  +K+ DFG S    
Sbjct: 131 KRVIHRDIKPENLLLGS---------------------------NGELKIADFGWSVHAP 163
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
               + +  T  Y  PE+I G   +   DLWS+G +  E   G   F+ H   E    + 
Sbjct: 164 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
           RV    P             +   GAR                                 
Sbjct: 224 RVEFTFP------------DFVTEGAR--------------------------------- 238
Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                DL+  LL+++ ++RL   E L HP+   +  +P+
Sbjct: 239 -----DLISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 25  KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 78
Query: 159 RNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +    L DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 79  YAVVS-EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D  Y         IK                
Sbjct: 138 RDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK---------------- 180
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 106/240 (44%), Gaps = 34/240 (14%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIGGTRCVQ 157
           +G G    V   +   KKE VAIK +         +  + EI  + +    +I     V 
Sbjct: 18  IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI-----VS 72
Query: 158 IRNWFDYRNHICIVFEKL-GPSLYDFLR----KNSYRSFPID--LVRELGRQLLESVAFM 210
               F  ++ + +V + L G S+ D ++    K  ++S  +D   +  + R++LE + ++
Sbjct: 73  YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 132
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H+   IH D+K  NILL     V++ D+   +  +  G   +N  +            TF
Sbjct: 133 HKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK-----------TF 181
Query: 271 EHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
                   V T  + APEV+  + G+++  D+WS G   +EL +G A +  +  ++ L +
Sbjct: 182 --------VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML 233

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 36/232 (15%)
Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV-LQRLA 146
           ++T   ++   +G+G F  V  C         A KI+ +     R+   +E +  + RL 
Sbjct: 1   SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +H    +  V++ +         +VF+ + G  L++ +    Y S   D    + +Q+LE
Sbjct: 61  KH----SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI-QQILE 114
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           +V   H++ ++H DLKPEN+LL S                          K +A+KL DF
Sbjct: 115 AVLHCHQMGVVHRDLKPENLLLASK------------------------CKGAAVKLADF 150
Query: 266 GSTTFEHQDHSY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           G       D         T  Y +PEV+    +  P D+W+ G IL  L  G
Sbjct: 151 GLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 106/240 (44%), Gaps = 34/240 (14%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIGGTRCVQ 157
           +G G    V   +   KKE VAIK +         +  + EI  + +    +I     V 
Sbjct: 23  IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI-----VS 77
Query: 158 IRNWFDYRNHICIVFEKL-GPSLYDFLR----KNSYRSFPID--LVRELGRQLLESVAFM 210
               F  ++ + +V + L G S+ D ++    K  ++S  +D   +  + R++LE + ++
Sbjct: 78  YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 137
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H+   IH D+K  NILL     V++ D+   +  +  G   +N  +            TF
Sbjct: 138 HKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK-----------TF 186
Query: 271 EHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
                   V T  + APEV+  + G+++  D+WS G   +EL +G A +  +  ++ L +
Sbjct: 187 --------VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML 238

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 45/243 (18%)
Query: 98  SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMIEIDVLQRLARHDIGGTR 154
           +++G G+FG V   +  +    VA+KI++ ++   E   A   E+ VL++        TR
Sbjct: 42  TRIGSGSFGTV---YKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRK--------TR 90
Query: 155 CVQIRNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
            V I  +  Y  ++++ IV +   G SLY  L     + F +  + ++ RQ  + + ++H
Sbjct: 91  HVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK-DGSYFKNLPKSSAIKLIDFGSTTF 270
              +IH D+K  NI L     VK+ D+   +  S+  GS     P  S +          
Sbjct: 150 AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL---------- 199
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                        + APEVI     N   +  D++S G +L EL +GE  +    N + +
Sbjct: 200 -------------WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI 246
Query: 328 AMM 330
             M
Sbjct: 247 IFM 249

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/338 (21%), Positives = 131/338 (38%), Gaps = 104/338 (30%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIGGTRCVQ 157
           +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +   R V 
Sbjct: 26  LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV---RIVD 78
Query: 158 I-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ ++H + +
Sbjct: 79  VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STTFEH 272
            H D+KPEN+L  S    K P+                    + +KL DFG    TT E 
Sbjct: 139 AHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKETTGEK 174
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL-VELCSGEALFQTHENLEHLAMME 331
            D S                      CD+WS+G I+ + LC     +  H       M  
Sbjct: 175 YDKS----------------------CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 212
Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
           R+                     R  + ++P+   S  S                     
Sbjct: 213 RI---------------------RMGQYEFPNPEWSEVS--------------------- 230
Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
             ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 231 -EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 267

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 25/117 (21%)
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
           L  EL  Q+ + V ++H  +LIH DLKP NI LV  + VK+ D+  ++    DG   ++ 
Sbjct: 137 LALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS- 195
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                                     T  Y +PE I    +    DL+++G IL EL
Sbjct: 196 ------------------------KGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/229 (20%), Positives = 102/229 (44%), Gaps = 37/229 (16%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEID--VLQRLARHD-- 149
           +L  +G G++ +V+     +   + A+++V+   +N   +   ++ +  V ++ + H   
Sbjct: 56  LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 115
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           +G   C Q  +    R    I +   G  ++   R+   R  P +  R    ++  ++ +
Sbjct: 116 VGLHSCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNY 168
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +HE  +I+ DLK +N+LL S  ++K+ DY       + G                  ++T
Sbjct: 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT----------------TST 212
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
           F          T +Y APE++ G  + +  D W++G ++ E+ +G + F
Sbjct: 213 F--------CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 26/116 (22%)
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
           +Q+LES+A+ H   ++H +LKPEN+LL S                          K +A+
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 147
Query: 261 KLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           KL DFG     +   ++     T  Y +PEV+    ++ P D+W+ G IL  L  G
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 26/116 (22%)
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
           +Q+LES+A+ H   ++H +LKPEN+LL S                          K +A+
Sbjct: 111 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 146
Query: 261 KLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           KL DFG     +   ++     T  Y +PEV+    ++ P D+W+ G IL  L  G
Sbjct: 147 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 125/339 (36%), Gaps = 94/339 (27%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 20  LGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVEIQSHLRH----PN 73
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--RFDEQRTATYITELANALSYCHS 130
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE 271
            R+IH D+KPEN+LL S                           +  +K+ DFG S    
Sbjct: 131 KRVIHRDIKPENLLLGS---------------------------NGELKIADFGWSVHAP 163
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
                 +  T  Y  PE+I G   +   DLWS+G +  E   G   F+ H   E    + 
Sbjct: 164 SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
           RV    P             +   GAR                                 
Sbjct: 224 RVEFTFP------------DFVTEGAR--------------------------------- 238
Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                DL+  LL+++ ++RL   E L HP+   +  +P+
Sbjct: 239 -----DLISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 15  KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 68
Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+  + +   +  + ++  Q+   +A++  +  +H
Sbjct: 69  YAVVS-EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 127
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D            IK                
Sbjct: 128 RDLRAANILVGENLVCKVADFG-LARLIEDNEXTARQGAKFPIK---------------- 170
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 171 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 220

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 26/116 (22%)
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
           +Q+LES+A+ H   ++H +LKPEN+LL S                          K +A+
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 147
Query: 261 KLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           KL DFG     +   ++     T  Y +PEV+    ++ P D+W+ G IL  L  G
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 25  KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 78
Query: 159 RNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +    L DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 79  YAVVS-EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D  Y         IK                
Sbjct: 138 RDLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIK---------------- 180
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 40/243 (16%)
Query: 74  RPDDKDGHYVFAIGENLTPR--CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY 131
           +P DKD   +        PR   K++ ++G G FG+V   + N   + VA+K ++     
Sbjct: 1   KPWDKDAWEI--------PRESIKLVKRLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMS 51
Query: 132 REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRS 190
            +A + E ++++ L +HD    + V++         I I+ E +   SL DFL+ +    
Sbjct: 52  VQAFLEEANLMKTL-QHD----KLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGK 106
Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250
             +  + +   Q+ E +A++     IH DL+  N+L+  +   K+ D+  L+R  +D  Y
Sbjct: 107 VLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFG-LARVIEDNEY 165
Query: 251 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 310
                    IK                      + APE I    +    D+WS G +L E
Sbjct: 166 TAREGAKFPIK----------------------WTAPEAINFGCFTIKSDVWSFGILLYE 203
Query: 311 LCS 313
           + +
Sbjct: 204 IVT 206

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 39  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 98
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 99  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 153
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 154 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 188
Query: 259 AIKLIDFGSTT-FEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 189 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 247
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 248 PFEHDEEI 255

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 19  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 79  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 133
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 134 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 168
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 169 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 227
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 228 PFEHDEEI 235

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
           +++ F H+  +IH D+KP NIL+ +   VKV D+                    A  + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISATNAVKVVDFGI------------------ARAIAD 168
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
            G++  +    + V+ T  Y +PE   G   +   D++S+GC+L E+ +GE  F
Sbjct: 169 SGNSVXQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 20  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 80  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 134
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 169
Query: 259 AIKLIDFGSTT-FEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 170 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 228
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 229 PFEHDEEI 236

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 5   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 65  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 119
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 154
Query: 259 AIKLIDFGSTT-FEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 155 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 214 PFEHDEEI 221

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 52  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 111
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 112 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 166
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 167 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 201
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 202 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 260
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 261 PFEHDEEI 268

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 20  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 80  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 134
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 169
Query: 259 AIKLIDFGSTT-FEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 170 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 228
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 229 PFEHDEEI 236

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 32/236 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    + VQ+
Sbjct: 25  KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----KLVQL 78
Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +  +H
Sbjct: 79  YAVVS-EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY 277
            DL+  NIL+      KV D+  L+R  +D            IK                
Sbjct: 138 RDLRAANILVGENLVCKVADFG-LARLIEDNEXTARQGAKFPIK---------------- 180
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                 + APE  L   +    D+WS G +L EL + G   +    N E L  +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 19  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 79  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 133
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 134 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 168
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 169 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 227
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 228 PFEHDEEI 235

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 27  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 86
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 87  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 141
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 142 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 176
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 177 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 235
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 236 PFEHDEEI 243

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 20  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 80  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 134
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 169
Query: 259 AIKLIDFGSTT-FEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 170 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 228
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 229 PFEHDEEI 236

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 5   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 65  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 119
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 154
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 155 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 214 PFEHDEEI 221

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 4   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 64  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 118
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 119 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 153
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 154 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 212
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 213 PFEHDEEI 220

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 23/144 (15%)
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
           +++ F H+  +IH D+KP NI++ +   VKV D+                    A  + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 168
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHE 322
            G++  +    + V+ T  Y +PE   G   +   D++S+GC+L E+ +GE  F   + +
Sbjct: 169 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPD 225
Query: 323 NLEHLAMMERVLGPLPHHMVIRAD 346
           ++ +  + E  + P   H  + AD
Sbjct: 226 SVAYQHVREDPIPPSARHEGLSAD 249

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 5   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 65  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 119
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 154
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 155 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 214 PFEHDEEI 221

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 92  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 146
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 181
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 182 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 241 PFEHDEEI 248

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 93  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 147
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 182
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 183 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 242 PFEHDEEI 249

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 47  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 107 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 161
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 162 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 196
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 197 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 255
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 256 PFEHDEEI 263

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 93  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 147
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 182
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 183 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 242 PFEHDEEI 249

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 93  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 147
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 182
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 183 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 242 PFEHDEEI 249

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 92  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 146
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 181
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 182 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 241 PFEHDEEI 248

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 93  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 147
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 182
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 183 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 242 PFEHDEEI 249

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 92  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 146
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 181
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 182 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 241 PFEHDEEI 248

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 92  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 146
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 181
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 182 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 241 PFEHDEEI 248

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 47  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 107 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 161
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 162 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 196
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 197 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 255
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 256 PFEHDEEI 263

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 37/241 (15%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +IL  +G G F +V      +  ++ A+KI   +NK+      E+   +      + G R
Sbjct: 64  EILKVIGRGAFSEVAVVKMKQTGQVYAMKI---MNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 155 --CVQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               Q+   F   N++ +V E  +G  L   L K   R  P ++ R    +++ ++  +H
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSVH 179
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
            L  +H D+KP+NILL    ++++ D+         GS  K     +   L+        
Sbjct: 180 RLGYVHRDIKPDNILLDRCGHIRLADF---------GSCLKLRADGTVRSLV-------- 222
Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNY-------PCDLWSVGCILVELCSGEALFQTHENL 324
                  V T  Y +PE++  +G           CD W++G    E+  G+  F      
Sbjct: 223 ------AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA 276
Query: 325 E 325
           E
Sbjct: 277 E 277

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 44  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 104 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 159
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
           ++   R IH DL   NIL+ +   VK+ D+       +D    K   P  S I       
Sbjct: 160 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 212
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                           + APE +    ++   D+WS G +L EL
Sbjct: 213 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 241

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 42/248 (16%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  + ++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 3   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 63  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 117
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+LE+V   H   ++H D+K ENIL+             L+R               
Sbjct: 118 FFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE------------- 152
Query: 259 AIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEA 316
            +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++  G+ 
Sbjct: 153 -LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 211
Query: 317 LFQTHENL 324
            F+  E +
Sbjct: 212 PFEHDEEI 219

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 19  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 79  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 134
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
           ++   R IH DL   NIL+ +   VK+ D+       +D    K   P  S I       
Sbjct: 135 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 187
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                           + APE +    ++   D+WS G +L EL
Sbjct: 188 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 216

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 31  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 91  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 146
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
           ++   R IH DL   NIL+ +   VK+ D+       +D    K   P  S I       
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 199
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                           + APE +    ++   D+WS G +L EL
Sbjct: 200 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 228

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 20  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 80  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 135
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
           ++   R IH DL   NIL+ +   VK+ D+       +D    K   P  S I       
Sbjct: 136 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 188
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                           + APE +    ++   D+WS G +L EL
Sbjct: 189 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 217

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 40/258 (15%)
Query: 66  PRTGSPPWRPDDKDGHYVFAIG-ENLTPRCKILS---KMGEGTFGQVVECFDNEKKELVA 121
           P+T S P  P D D     +IG +N   +   L    ++G G +G V +       +++A
Sbjct: 23  PQTSSTP--PRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMA 80
Query: 122 IKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYD 181
           +K +R+    +E   + +D+   ++   +     V           + I  E +  SL  
Sbjct: 81  VKRIRATVNSQEQKRLLMDL--DISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDK 138
Query: 182 FLRK--NSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDY 238
           F ++  +  ++ P D++ ++   +++++  +H +L +IH D+KP N+L+ +   VK+ D+
Sbjct: 139 FYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDF 198
Query: 239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI----LGLG 294
                      Y  +    S  K ID G               + Y APE I       G
Sbjct: 199 GI-------SGYLVD----SVAKTIDAG--------------CKPYMAPERINPELNQKG 233
Query: 295 WNYPCDLWSVGCILVELC 312
           ++   D+WS+G  ++EL 
Sbjct: 234 YSVKSDIWSLGITMIELA 251

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 18  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 78  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 133
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
           ++   R IH DL   NIL+ +   VK+ D+       +D    K   P  S I       
Sbjct: 134 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 186
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                           + APE +    ++   D+WS G +L EL
Sbjct: 187 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 215

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/349 (20%), Positives = 138/349 (39%), Gaps = 80/349 (22%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
           + L  +  I   +G G FG V  C +   K+    K V+     +     EI +L  +AR
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILN-IAR 59
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           H       + +   F+    + ++FE + G  +++ +  +++     ++V  +  Q+ E+
Sbjct: 60  H----RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYV-HQVCEA 114
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + F+H   + H D++PENI+             + +R            +SS IK+I+FG
Sbjct: 115 LQFLHSHNIGHFDIRPENII-------------YQTR------------RSSTIKIIEFG 149
Query: 267 ST-TFEHQDHSYVVSTR-HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
                +  D+  ++ T   Y APEV      +   D+WS+G ++  L SG   F    N 
Sbjct: 150 QARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ 209
Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
           +   ++E ++                      A   + + A    S+ A           
Sbjct: 210 Q---IIENIM---------------------NAEYTFDEEAFKEISIEA----------- 234
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLV 433
                      +D +  LL  +   R+ A EAL+HP+  + + R +  V
Sbjct: 235 -----------MDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKV 272

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 16  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 76  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 131
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
           ++   R IH DL   NIL+ +   VK+ D+       +D    K   P  S I       
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 184
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                           + APE +    ++   D+WS G +L EL
Sbjct: 185 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 213

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 73  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 128
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
           ++   R IH DL   NIL+ +   VK+ D+       +D    K   P  S I       
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 181
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                           + APE +    ++   D+WS G +L EL
Sbjct: 182 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 210

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 11  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 71  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 126
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
           ++   R IH DL   NIL+ +   VK+ D+       +D    K   P  S I       
Sbjct: 127 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 179
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                           + APE +    ++   D+WS G +L EL
Sbjct: 180 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 208

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 123/294 (41%), Gaps = 46/294 (15%)
Query: 95  KILSKMGEGTFGQVVEC-FDNE---KKELVAIKIVRSINKYREAAMI--EIDVLQRLARH 148
           K +  +GEG FG+V  C +D E     E VA+K ++  +     A +  EI++L+ L   
Sbjct: 24  KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL--GRQLLE 205
           +I   + +      D  N I ++ E L   SL ++L KN  +   I+L ++L    Q+ +
Sbjct: 84  NIVKYKGICTE---DGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICK 137
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
            + ++   + +H DL   N+L+ S   VK+ D+                  + AI+    
Sbjct: 138 GMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGL----------------TKAIETDKE 181
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
             T  + +D     S   + APE ++   +    D+WS G  L EL     L     +  
Sbjct: 182 XXTVKDDRD-----SPVFWYAPECLMQSKFYIASDVWSFGVTLHEL-----LTYCDSDSS 231
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWKL 377
            +A+  +++GP    M +    R     + G RL  P          MR  W+ 
Sbjct: 232 PMALFLKMIGPTHGQMTV---TRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEF 282

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 101/247 (40%), Gaps = 55/247 (22%)
Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARH--- 148
           R ++   + EG F  V E  D       A+K + S  + +  A+I E+  +++L+ H   
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 149 -DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRS-FPIDLVRELGRQLLES 206
                   +        +    ++ E     L +FL+K   R     D V ++  Q   +
Sbjct: 89  VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 207 VAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
           V  MH  +  +IH DLK EN+LL                 S  G+          IKL D
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLL-----------------SNQGT----------IKLCD 181
Query: 265 FGS-TTFEH-QDHSYVV-------------STRHYRAPEVILGLGWNYPC----DLWSVG 305
           FGS TT  H  D+S+               +T  YR PE+I  L  N+P     D+W++G
Sbjct: 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII-DLYSNFPIGEKQDIWALG 240
Query: 306 CILVELC 312
           CIL  LC
Sbjct: 241 CILYLLC 247

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 73  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 128
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
           ++   R IH DL   NIL+ +   VK+ D+       +D    K   P  S I       
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 181
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                           + APE +    ++   D+WS G +L EL
Sbjct: 182 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 210

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 31  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 91  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 146
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
           ++   R IH DL   NIL+ +   VK+ D+       +D    K   P  S I       
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 199
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                           + APE +    ++   D+WS G +L EL
Sbjct: 200 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 228

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
           +++ F H+  +IH D+KP NI++ +   VKV D+                    A  + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 168
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
            G++  +    + V+ T  Y +PE   G   +   D++S+GC+L E+ +GE  F
Sbjct: 169 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 12  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 72  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 127
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
           ++   R IH DL   NIL+ +   VK+ D+       +D    K   P  S I       
Sbjct: 128 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 180
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                           + APE +    ++   D+WS G +L EL
Sbjct: 181 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 209

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 17  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 77  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 132
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
           ++   R IH DL   NIL+ +   VK+ D+       +D    K   P  S I       
Sbjct: 133 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 185
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                           + APE +    ++   D+WS G +L EL
Sbjct: 186 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 214

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
           +++ F H+  +IH D+KP NI++ +   VKV D+                    A  + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 168
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
            G++  +    + V+ T  Y +PE   G   +   D++S+GC+L E+ +GE  F
Sbjct: 169 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 123/294 (41%), Gaps = 46/294 (15%)
Query: 95  KILSKMGEGTFGQVVEC-FDNE---KKELVAIKIVRSINKYREAAMI--EIDVLQRLARH 148
           K +  +GEG FG+V  C +D E     E VA+K ++  +     A +  EI++L+ L   
Sbjct: 12  KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL--GRQLLE 205
           +I   + +      D  N I ++ E L   SL ++L KN  +   I+L ++L    Q+ +
Sbjct: 72  NIVKYKGICTE---DGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICK 125
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
            + ++   + +H DL   N+L+ S   VK+ D+                  + AI+    
Sbjct: 126 GMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGL----------------TKAIETDKE 169
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
             T  + +D     S   + APE ++   +    D+WS G  L EL     L     +  
Sbjct: 170 XXTVKDDRD-----SPVFWYAPECLMQSKFYIASDVWSFGVTLHEL-----LTYCDSDSS 219
Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWKL 377
            +A+  +++GP    M +    R     + G RL  P          MR  W+ 
Sbjct: 220 PMALFLKMIGPTHGQMTV---TRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEF 270

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
           +++ F H+  +IH D+KP NI++ +   VKV D+                    A  + D
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 168
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
            G++  +    + V+ T  Y +PE   G   +   D++S+GC+L E+ +GE  F
Sbjct: 169 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
           +++ F H+  +IH D+KP NI++ +   VKV D+                    A  + D
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ARAIAD 185
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
            G++  +    + V+ T  Y +PE   G   +   D++S+GC+L E+ +GE  F
Sbjct: 186 SGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 44/226 (19%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G FGQV +       +   IK V+  N   E A  E+  L +L   +I         
Sbjct: 19  IGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNI--VHYNGCW 73
Query: 160 NWFDY----------RNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           + FDY          R+    +F ++      +L  ++ K         L  EL  Q+ +
Sbjct: 74  DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITK 133
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
            V ++H  +LI+ DLKP NI LV  + VK+ D+  ++    DG   ++            
Sbjct: 134 GVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS------------ 181
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                          T  Y +PE I    +    DL+++G IL EL
Sbjct: 182 -------------KGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 88/238 (36%), Gaps = 61/238 (25%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRCV 156
           ++G G FG V+     +  E VAIK  R     K RE   +EI ++++L   ++   R  
Sbjct: 22  RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR-- 79
Query: 157 QIRNWFDYRNHICIVFEKLGPS------------------LYDFLRKNSYRSFPIDLVRE 198
                      +    +KL P+                  L  F      +  PI   R 
Sbjct: 80  ----------EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI---RT 126
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
           L   +  ++ ++HE R+IH DLKPENI+L                           P+  
Sbjct: 127 LLSDISSALRYLHENRIIHRDLKPENIVLQPG------------------------PQRL 162
Query: 259 AIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             K+ID G      Q    +  V T  Y APE++    +    D WS G +  E  +G
Sbjct: 163 IHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 44/247 (17%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           ++L  +G+G F +V         + VA+KI+       +   +    LQ+L R       
Sbjct: 10  RLLKTIGKGNFAKVKLARHILTGKEVAVKII-------DKTQLNSSSLQKLFREVRIMKV 62
Query: 150 IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           +     V++    +    + +V E   G  ++D+L  + +        R   RQ++ +V 
Sbjct: 63  LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGW--MKEKEARAKFRQIVSAVQ 120
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           + H+  ++H DLK EN+LL +   +K+ D+ F +                          
Sbjct: 121 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------------EF 156
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLEHL 327
           TF ++  ++  S   Y APE+  G  ++ P  D+WS+G IL  L SG   F   +NL+ L
Sbjct: 157 TFGNKLDTFCGSP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKEL 214
Query: 328 AMMERVL 334
              ERVL
Sbjct: 215 R--ERVL 219

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 44/247 (17%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           ++L  +G+G F +V         + VA+KI+       +   +    LQ+L R       
Sbjct: 17  RLLKTIGKGNFAKVKLARHILTGKEVAVKII-------DKTQLNSSSLQKLFREVRIMKV 69
Query: 150 IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           +     V++    +    + +V E   G  ++D+L   ++        R   RQ++ +V 
Sbjct: 70  LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAVQ 127
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           + H+  ++H DLK EN+LL +   +K+ D+ F +                          
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------------EF 163
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLEHL 327
           TF ++  ++  S   Y APE+  G  ++ P  D+WS+G IL  L SG   F   +NL+ L
Sbjct: 164 TFGNKLDTFCGSP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKEL 221
Query: 328 AMMERVL 334
              ERVL
Sbjct: 222 R--ERVL 226

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 128/337 (37%), Gaps = 74/337 (21%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           +GEG   +V  C +    +  A+KI+ +     R     E+++L +   H       +++
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH----RNVLEL 76
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
             +F+  +   +VFEK+ G S+   + K   R F       + + +  ++ F+H   + H
Sbjct: 77  IEFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAH 134
Query: 218 TDLKPENILLV---SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
            DLKPENIL         VK+ D+   S    +G      P S+   L   GS       
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS---PISTPELLTPCGSA------ 185
Query: 275 HSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
                    Y APEV+         ++  CDLWS+G IL  L SG   F           
Sbjct: 186 --------EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF----------- 226
Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR-----LPNLI 384
                                   R G+   W  G         +++ ++      P+  
Sbjct: 227 ----------------------VGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKD 264
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
             H+  +A DLI     LL  D  +RL A + L+HP+
Sbjct: 265 WAHISCAAKDLIS---KLLVRDAKQRLSAAQVLQHPW 298

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 30/220 (13%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ K+G G FG+V   + N   + VA+K ++      +A + E ++++ L +HD    +
Sbjct: 15  KLVKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTL-QHD----K 68
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V++         I I+ E +   SL DFL+ +      +  + +   Q+ E +A++   
Sbjct: 69  LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  N+L+  +   K+ D+  L+R  +D  Y         IK            
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFG-LARVIEDNEYTAREGAKFPIK------------ 175
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                     + APE I    +    ++WS G +L E+ +
Sbjct: 176 ----------WTAPEAINFGCFTIKSNVWSFGILLYEIVT 205

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 42/236 (17%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEIDVLQRLARHDIGG 152
           +G G FG V           VAIK V    I+ + E        +E+ +L++++    G 
Sbjct: 12  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS---GF 68
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R    Q+LE+V   
Sbjct: 69  SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHC 126
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS-TT 269
           H   ++H D+K ENIL+             L+R                +KLIDFGS   
Sbjct: 127 HNXGVLHRDIKDENILID------------LNRGE--------------LKLIDFGSGAL 160
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHENL 324
            +   ++    TR Y  PE I    ++     +WS+G +L ++  G+  F+  E +
Sbjct: 161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 128/337 (37%), Gaps = 74/337 (21%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           +GEG   +V  C +    +  A+KI+ +     R     E+++L +   H       +++
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH----RNVLEL 76
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
             +F+  +   +VFEK+ G S+   + K   R F       + + +  ++ F+H   + H
Sbjct: 77  IEFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAH 134
Query: 218 TDLKPENILLV---SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
            DLKPENIL         VK+ D+   S    +G      P S+   L   GS       
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCS---PISTPELLTPCGSA------ 185
Query: 275 HSYVVSTRHYRAPEVILGLG-----WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
                    Y APEV+         ++  CDLWS+G IL  L SG   F           
Sbjct: 186 --------EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF----------- 226
Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR-----LPNLI 384
                                   R G+   W  G         +++ ++      P+  
Sbjct: 227 ----------------------VGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKD 264
Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
             H+  +A DLI     LL  D  +RL A + L+HP+
Sbjct: 265 WAHISCAAKDLIS---KLLVRDAKQRLSAAQVLQHPW 298

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 91/226 (40%), Gaps = 37/226 (16%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRCV 156
           ++G G FG V+     +  E VAIK  R     K RE   +EI ++++L   ++   R V
Sbjct: 21  RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 157 QIRNWFDYRNHICIVFEKL--GPSLYDFLRK----NSYRSFPIDLVRELGRQLLESVAFM 210
                    N + ++  +   G  L  +L +       +  PI   R L   +  ++ ++
Sbjct: 81  PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI---RTLLSDISSALRYL 137
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           HE R+IH DLKPENI+L                           P+    K+ID G    
Sbjct: 138 HENRIIHRDLKPENIVLQPG------------------------PQRLIHKIIDLGYAKE 173
Query: 271 EHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             Q    +  V T  Y APE++    +    D WS G +  E  +G
Sbjct: 174 LDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 44/247 (17%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           ++L  +G+G F +V         + VA+KI+       +   +    LQ+L R       
Sbjct: 17  RLLKTIGKGNFAKVKLARHILTGKEVAVKII-------DKTQLNSSSLQKLFREVRIMKV 69
Query: 150 IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           +     V++    +    + +V E   G  ++D+L   ++        R   RQ++ +V 
Sbjct: 70  LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAVQ 127
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           + H+  ++H DLK EN+LL +   +K+ D+ F +                          
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------------EF 163
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLEHL 327
           TF ++  ++  S   Y APE+  G  ++ P  D+WS+G IL  L SG   F   +NL+ L
Sbjct: 164 TFGNKLDTFCGSP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKEL 221
Query: 328 AMMERVL 334
              ERVL
Sbjct: 222 R--ERVL 226

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 41/253 (16%)
Query: 85  AIGENLTPRCKI-----LSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAA 135
            IG N + R  I     +  +G+G+FG+V+     E  +L A+K+++      +   E  
Sbjct: 11  GIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECT 70
Query: 136 MIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID 194
           M E  +L     H        Q+   F   + +  V E + G  L   ++K+  R F   
Sbjct: 71  MTEKRILSLARNHPF----LTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEA 124
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
             R    +++ ++ F+H+  +I+ DLK +N+LL    + K+ D+       K+G      
Sbjct: 125 RARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM----CKEG------ 174
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                   I  G TT      +    T  Y APE++  + +    D W++G +L E+  G
Sbjct: 175 --------ICNGVTT------ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
Query: 315 EALFQTHENLEHL 327
            A F+  EN + L
Sbjct: 221 HAPFEA-ENEDDL 232

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR 154
           +S++G G  G V +        ++A K++    K   R   + E+ VL     H+     
Sbjct: 73  ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPY 127
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL- 213
            V     F     I I  E +     D + K + R  P  ++ ++   +++ + ++ E  
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH 186
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           +++H D+KP NIL+ S   +K+ D+                    + +LID  + +F   
Sbjct: 187 KIMHRDVKPSNILVNSRGEIKLCDFGV------------------SGQLIDSMANSF--- 225
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                V TR Y +PE + G  ++   D+WS+G  LVE+  G
Sbjct: 226 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 42/236 (17%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEIDVLQRLARHDIGG 152
           +G G FG V           VAIK V    I+ + E        +E+ +L++++    G 
Sbjct: 12  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS---GF 68
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R    Q+LE+V   
Sbjct: 69  SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHC 126
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS-TT 269
           H   ++H D+K ENIL+             L+R                +KLIDFGS   
Sbjct: 127 HNCGVLHRDIKDENILID------------LNRGE--------------LKLIDFGSGAL 160
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHENL 324
            +   ++    TR Y  PE I    ++     +WS+G +L ++  G+  F+  E +
Sbjct: 161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 42/236 (17%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEIDVLQRLARHDIGG 152
           +G G FG V           VAIK V    I+ + E        +E+ +L++++    G 
Sbjct: 12  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS---GF 68
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R    Q+LE+V   
Sbjct: 69  SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHC 126
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS-TT 269
           H   ++H D+K ENIL+             L+R                +KLIDFGS   
Sbjct: 127 HNCGVLHRDIKDENILID------------LNRGE--------------LKLIDFGSGAL 160
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHENL 324
            +   ++    TR Y  PE I    ++     +WS+G +L ++  G+  F+  E +
Sbjct: 161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 60/255 (23%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++L  +G+G F +V              K+ R I   +E A+  ID  Q  +       R
Sbjct: 17  RLLKTIGKGNFAKV--------------KLARHILTGKEVAVRIIDKTQLNSSSLQKLFR 62
Query: 155 CVQIRNWFDYRNHICIVFEKL--------------GPSLYDFLRKNSYRSFPIDLVRELG 200
            V+I    ++ N I  +FE +              G  ++D+L   ++        R   
Sbjct: 63  EVRIMKVLNHPN-IVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKF 119
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
           RQ++ +V + H+  ++H DLK EN+LL +   +K+ D+ F +  +     F N       
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-----FGN------- 167
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 319
           KL +F               +  Y APE+  G  ++ P  D+WS+G IL  L SG   F 
Sbjct: 168 KLDEF-------------CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Query: 320 THENLEHLAMMERVL 334
             +NL+ L   ERVL
Sbjct: 215 G-QNLKELR--ERVL 226

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 49/232 (21%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI-- 150
           ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++  
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENVVK 68
Query: 151 --GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
             G  R   I+  F        +F+++ P +            P    +    QL+  V 
Sbjct: 69  FYGHRREGNIQYLFLEYCSGGELFDRIEPDI----------GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++H + + H D+KPEN+LL   + +K+ D+                            +T
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 152
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            F + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 153 VFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 100/238 (42%), Gaps = 26/238 (10%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G+FG +    +    E VAIK+     K+ +     + +  +  +   GG     I
Sbjct: 16  KIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQ-----LHIESKFYKMMQGGVGIPSI 70
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           +      ++  +V E LGPSL D     S R F +  V  L  Q++  + ++H    IH 
Sbjct: 71  KWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHR 129
Query: 219 DLKPENILL---VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           D+KP+N L+        V + D+  L++  +D    +++P                ++++
Sbjct: 130 DVKPDNFLMGLGKKGNLVYIIDFG-LAKKYRDARTHQHIP----------------YREN 172
Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 333
             +  T  Y +    LG+  +   DL S+G +L+    G   +Q  +        ER+
Sbjct: 173 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 230

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 49/232 (21%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI-- 150
           ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++  
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENVVK 69
Query: 151 --GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
             G  R   I+  F        +F+++ P +            P    +    QL+  V 
Sbjct: 70  FYGHRREGNIQYLFLEYCSGGELFDRIEPDI----------GMPEPDAQRFFHQLMAGVV 119
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++H + + H D+KPEN+LL   + +K+ D+                            +T
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 153
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            F + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 154 VFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 37/238 (15%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 31  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 82
Query: 159 RNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y     + IV +   G SLY  L  +  + F +  + ++ RQ    + ++H   +
Sbjct: 83  LLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSI 141
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           IH DLK  NI L     VK+ D+   +  S+                   GS  FE    
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-----------------GSHQFEQLSG 184
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           S +     + APEVI     N   +  D+++ G +L EL +G+  +    N + +  M
Sbjct: 185 SIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 31  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 82
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y  +  + IV +   G SLY  L  +  + F +  + ++ RQ    + ++H   +
Sbjct: 83  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSI 141
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           IH DLK  NI L     VK+ D+   +  S+                   GS  FE    
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-----------------GSHQFEQLSG 184
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           S +     + APEVI     N   +  D+++ G +L EL +G+  +    N + +  M
Sbjct: 185 SIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 16  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+ ++ R   I L+ +   Q+ + + 
Sbjct: 76  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLL-QYTSQICKGME 131
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
           ++   R IH DL   NIL+ +   VK+ D+       +D    K   P  S I       
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 184
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                           + APE +    ++   D+WS G +L EL
Sbjct: 185 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 213

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR 154
           +S++G G  G V +        ++A K++    K   R   + E+ VL     H+     
Sbjct: 38  ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPY 92
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL- 213
            V     F     I I  E +     D + K + R  P  ++ ++   +++ + ++ E  
Sbjct: 93  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH 151
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           +++H D+KP NIL+ S   +K+ D+                    + +LID  + +F   
Sbjct: 152 KIMHRDVKPSNILVNSRGEIKLCDF------------------GVSGQLIDSMANSF--- 190
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                V TR Y +PE + G  ++   D+WS+G  LVE+  G
Sbjct: 191 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG+V    D +     A+K VR +  +R        V + +A   +   R V +
Sbjct: 79  RLGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFR--------VEELVACAGLSSPRIVPL 129
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    + I  E L G SL   +++      P D       Q LE + ++H  R++H
Sbjct: 130 YGAVREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILH 187
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-- 275
            D+K +N+LL                 S DGS            L DFG       D   
Sbjct: 188 GDVKADNVLL-----------------SSDGSR---------AALCDFGHALCLQPDGLG 221
Query: 276 ------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  Y+  T  + APEV++G   +   D+WS  C+++ + +G
Sbjct: 222 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 49/232 (21%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI-- 150
           ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++  
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENVVK 68
Query: 151 --GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
             G  R   I+  F        +F+++ P +            P    +    QL+  V 
Sbjct: 69  FYGHRREGNIQYLFLEYCSGGELFDRIEPDI----------GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++H + + H D+KPEN+LL   + +K+ D+                            +T
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 152
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            F + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 153 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 50/234 (21%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHDIGG 152
           +G G FG+VVE   F   K++ V   A+K+++S      +EA M E+ ++  L +H+   
Sbjct: 46  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 102
Query: 153 TRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGR---------- 201
              V +     +   + ++ E      L +FLR    R    DL +E GR          
Sbjct: 103 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLR----RKAEADLDKEDGRPLELRDLLHF 157
Query: 202 --QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
             Q+ + +AF+     IH D+   N+LL +    K+ D+        D +Y         
Sbjct: 158 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
           +K                      + APE I    +    D+WS G +L E+ S
Sbjct: 218 VK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           ++L  +G+G F +V         + VA+KI+       +   +    LQ+L R       
Sbjct: 17  RLLKTIGKGNFAKVKLARHILTGKEVAVKII-------DKTQLNSSSLQKLFREVRIMKV 69
Query: 150 IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           +     V++    +    + +V E   G  ++D+L   ++        R   RQ++ +V 
Sbjct: 70  LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAVQ 127
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           + H+  ++H DLK EN+LL +   +K+ D+ F +  +     F N       KL  F   
Sbjct: 128 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-----FGN-------KLDAF--- 172
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLEHL 327
                          Y APE+  G  ++ P  D+WS+G IL  L SG   F   +NL+ L
Sbjct: 173 ----------CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKEL 221
Query: 328 AMMERVL 334
              ERVL
Sbjct: 222 R--ERVL 226

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR 154
           +S++G G  G V +        ++A K++    K   R   + E+ VL     H+     
Sbjct: 11  ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPY 65
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL- 213
            V     F     I I  E +     D + K + R  P  ++ ++   +++ + ++ E  
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH 124
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           +++H D+KP NIL+ S   +K+ D+                    + +LID  + +F   
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGV------------------SGQLIDSMANSF--- 163
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                V TR Y +PE + G  ++   D+WS+G  LVE+  G
Sbjct: 164 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 94/239 (39%), Gaps = 47/239 (19%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHD--- 149
           +G G FG+VVE   F   K++ V   A+K+++S      +EA M E+ ++  L +H+   
Sbjct: 39  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 150 ------IGGTRCVQIRNWFDYRNHICIVFEK----LGPSLY-----DFLRKNSYRSFPID 194
                   G   + I  +  Y + +  +  K    LGPSL      + L K   R   + 
Sbjct: 99  NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
            +     Q+ + +AF+     IH D+   N+LL +    K+ D+        D +Y    
Sbjct: 159 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 218
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                +K                      + APE I    +    D+WS G +L E+ S
Sbjct: 219 NARLPVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 255

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGGTR 154
           ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+     
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE----- 64
Query: 155 CVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V ++
Sbjct: 65  --NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYL 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + + H D+KPEN+LL   + +K+ D+                            +T F
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------ATVF 154
Query: 271 EHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 50/234 (21%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHDIGG 152
           +G G FG+VVE   F   K++ V   A+K+++S      +EA M E+ ++  L +H+   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 153 TRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGR---------- 201
              V +     +   + ++ E      L +FLR    R    DL +E GR          
Sbjct: 111 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLR----RKAEADLDKEDGRPLELRDLLHF 165
Query: 202 --QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
             Q+ + +AF+     IH D+   N+LL +    K+ D+        D +Y         
Sbjct: 166 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
           +K                      + APE I    +    D+WS G +L E+ S
Sbjct: 226 VK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGGTR 154
           ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+     
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE----- 65
Query: 155 CVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V ++
Sbjct: 66  --NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYL 121
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + + H D+KPEN+LL   + +K+ D+                            +T F
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------ATVF 155
Query: 271 EHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 60/255 (23%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++L  +G+G F +V              K+ R I   +E A+  ID  Q  +       R
Sbjct: 17  RLLKTIGKGNFAKV--------------KLARHILTGKEVAVRIIDKTQLNSSSLQKLFR 62
Query: 155 CVQIRNWFDYRNHICIVFEKL--------------GPSLYDFLRKNSYRSFPIDLVRELG 200
            V+I    ++ N I  +FE +              G  ++D+L   ++        R   
Sbjct: 63  EVRIMKVLNHPN-IVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKF 119
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
           RQ++ +V + H+  ++H DLK EN+LL +   +K+ D+ F +                  
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN------------------ 161
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 319
                   TF ++  ++  S   Y APE+  G  ++ P  D+WS+G IL  L SG   F 
Sbjct: 162 ------EFTFGNKLDTFCGSP-PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Query: 320 THENLEHLAMMERVL 334
             +NL+ L   ERVL
Sbjct: 215 G-QNLKELR--ERVL 226

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR 154
           +S++G G  G V +        ++A K++    K   R   + E+ VL     H+     
Sbjct: 11  ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPY 65
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL- 213
            V     F     I I  E +     D + K + R  P  ++ ++   +++ + ++ E  
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH 124
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           +++H D+KP NIL+ S   +K+ D+                    + +LID  + +F   
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGV------------------SGQLIDSMANSF--- 163
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                V TR Y +PE + G  ++   D+WS+G  LVE+  G
Sbjct: 164 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGGTR 154
           ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+     
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE----- 65
Query: 155 CVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V ++
Sbjct: 66  --NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYL 121
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + + H D+KPEN+LL   + +K+ D+                            +T F
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------ATVF 155
Query: 271 EHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGGTR 154
           ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+     
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE----- 65
Query: 155 CVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V ++
Sbjct: 66  --NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYL 121
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + + H D+KPEN+LL   + +K+ D+                            +T F
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------ATVF 155
Query: 271 EHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGGTR 154
           ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+     
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE----- 65
Query: 155 CVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V ++
Sbjct: 66  --NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYL 121
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + + H D+KPEN+LL   + +K+ D+                            +T F
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------ATVF 155
Query: 271 EHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 107/255 (41%), Gaps = 60/255 (23%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++L  +G+G F +V              K+ R I   +E A+  ID  Q  +       R
Sbjct: 17  RLLKTIGKGNFAKV--------------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 155 CVQIRNWFDYRNHICIVFEKL--------------GPSLYDFLRKNSYRSFPIDLVRELG 200
            V+I    ++ N I  +FE +              G  ++D+L   ++        R   
Sbjct: 63  EVRIXKVLNHPN-IVKLFEVIETEKTLYLVXEYASGGEVFDYLV--AHGRXKEKEARAKF 119
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
           RQ++ +V + H+  ++H DLK EN+LL +   +K+ D+ F +  +     F N       
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFT-----FGN------- 167
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 319
           KL  F                  Y APE+  G  ++ P  D+WS+G IL  L SG   F 
Sbjct: 168 KLDAF-------------CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Query: 320 THENLEHLAMMERVL 334
             +NL+ L   ERVL
Sbjct: 215 G-QNLKEL--RERVL 226

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGGTR 154
           ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+     
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE----- 64
Query: 155 CVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V ++
Sbjct: 65  --NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYL 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + + H D+KPEN+LL   + +K+ D+                            +T F
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------ATVF 154
Query: 271 EHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR 154
           +S++G G  G V +        ++A K++    K   R   + E+ VL     H+     
Sbjct: 11  ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPY 65
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL- 213
            V     F     I I  E +     D + K + R  P  ++ ++   +++ + ++ E  
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH 124
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           +++H D+KP NIL+ S   +K+ D+                    + +LID  + +F   
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGV------------------SGQLIDSMANSF--- 163
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                V TR Y +PE + G  ++   D+WS+G  LVE+  G
Sbjct: 164 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 109/264 (41%), Gaps = 55/264 (20%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEIDVLQRLARHDIGG 152
           +G+G FG V        +  VAIK++        S         +E+ +L ++     G 
Sbjct: 39  LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGG-GH 97
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPS--LYDFL-RKNSYRSFPIDLVRELGRQLLESVAF 209
              +++ +WF+ +    +V E+  P+  L+D++  K      P    R    Q++ ++  
Sbjct: 98  PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGP---SRCFFGQVVAAIQH 154
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
            H   ++H D+K ENIL+                         +L +  A KLIDFGS  
Sbjct: 155 CHSRGVVHRDIKDENILI-------------------------DLRRGCA-KLIDFGSGA 188
Query: 270 FEHQD-HSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQ-------- 319
             H + ++    TR Y  PE I    ++  P  +WS+G +L ++  G+  F+        
Sbjct: 189 LLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEA 248
Query: 320 -----THENLEHLAMMERVLGPLP 338
                 H + +  A++ R L P P
Sbjct: 249 ELHFPAHVSPDCCALIRRCLAPKP 272

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG+V    D +     A+K VR +  +R        V + +A   +   R V +
Sbjct: 65  RVGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFR--------VEELVACAGLSSPRIVPL 115
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    + I  E L G SL   +++      P D       Q LE + ++H  R++H
Sbjct: 116 YGAVREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILH 173
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-- 275
            D+K +N+LL                 S DGS            L DFG       D   
Sbjct: 174 GDVKADNVLL-----------------SSDGSR---------AALCDFGHALCLQPDGLG 207
Query: 276 ------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  Y+  T  + APEV++G   +   D+WS  C+++ + +G
Sbjct: 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG+V    D +     A+K VR +  +R        V + +A   +   R V +
Sbjct: 81  RVGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFR--------VEELVACAGLSSPRIVPL 131
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                    + I  E L G SL   +++      P D       Q LE + ++H  R++H
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILH 189
Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-- 275
            D+K +N+LL                 S DGS            L DFG       D   
Sbjct: 190 GDVKADNVLL-----------------SSDGSR---------AALCDFGHALCLQPDGLG 223
Query: 276 ------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                  Y+  T  + APEV++G   +   D+WS  C+++ + +G
Sbjct: 224 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGGTR 154
           ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+     
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE----- 64
Query: 155 CVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V ++
Sbjct: 65  --NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYL 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + + H D+KPEN+LL   + +K+ D+                            +T F
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------ATVF 154
Query: 271 EHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 37/236 (15%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIG 151
            L  +G+G+FG+V+       +EL AIKI++      +   E  M+E  VL  L +    
Sbjct: 23  FLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPF- 81
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                Q+ + F   + +  V E +  G  +Y   +   ++  P  +      ++   + F
Sbjct: 82  ---LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKE-PQAVF--YAAEISIGLFF 135
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H+  +I+ DLK +N++L S  ++K+ D+        D                  G TT
Sbjct: 136 LHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD------------------GVTT 177
Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
            E         T  Y APE+I    +    D W+ G +L E+ +G+  F   +  E
Sbjct: 178 RE------FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 35/234 (14%)
Query: 84  FAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDV 141
            A+GE      + +S++G G  G V +        ++A K++    K   R   + E+ V
Sbjct: 1   MALGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 60
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGR 201
           L     H+      V     F     I I  E +     D + K + R  P  ++ ++  
Sbjct: 61  L-----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSI 114
Query: 202 QLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
            +++ + ++ E  +++H D+KP NIL+ S   +K+ D+                    + 
Sbjct: 115 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV------------------SG 156
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           +LID  +  F        V TR Y +PE + G  ++   D+WS+G  LVE+  G
Sbjct: 157 QLIDEMANEF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 116/276 (42%), Gaps = 42/276 (15%)
Query: 95  KILSKMGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-R 147
           K +  +GEG FG+V + C+D   +   E+VA+K ++     + R     EI++L+ L   
Sbjct: 11  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           H +    C + +   +    + + +  LG SL D+L ++      + L     +Q+ E +
Sbjct: 71  HIVKYKGCCEDQG--EKSVQLVMEYVPLG-SLRDYLPRHCVGLAQLLL---FAQQICEGM 124
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
           A++H    IH  L   N+LL +   VK+ D+  L+++  +G  +  + +       D  S
Sbjct: 125 AYLHAQHYIHRALAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE-------DGDS 176
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
             F             + APE +    + Y  D+WS G  L EL     L     N    
Sbjct: 177 PVF-------------WYAPECLKECKFYYASDVWSFGVTLYEL-----LTYCDSNQSPH 218
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 363
                ++G     M +    R  +   RG RL  PD
Sbjct: 219 TKFTELIGHTQGQMTV---LRLTELLERGERLPRPD 251

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 116/276 (42%), Gaps = 42/276 (15%)
Query: 95  KILSKMGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-R 147
           K +  +GEG FG+V + C+D   +   E+VA+K ++     + R     EI++L+ L   
Sbjct: 12  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           H +    C + +   +    + + +  LG SL D+L ++      + L     +Q+ E +
Sbjct: 72  HIVKYKGCCEDQG--EKSVQLVMEYVPLG-SLRDYLPRHCVGLAQLLL---FAQQICEGM 125
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
           A++H    IH  L   N+LL +   VK+ D+  L+++  +G  +  + +       D  S
Sbjct: 126 AYLHAQHYIHRALAARNVLLDNDRLVKIGDFG-LAKAVPEGHEYYRVRE-------DGDS 177
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
             F             + APE +    + Y  D+WS G  L EL     L     N    
Sbjct: 178 PVF-------------WYAPECLKECKFYYASDVWSFGVTLYEL-----LTYCDSNQSPH 219
Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 363
                ++G     M +    R  +   RG RL  PD
Sbjct: 220 TKFTELIGHTQGQMTV---LRLTELLERGERLPRPD 252

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGGTR 154
           ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+     
Sbjct: 9   LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE----- 63
Query: 155 CVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V ++
Sbjct: 64  --NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYL 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + + H D+KPEN+LL   + +K+ D+                            +T F
Sbjct: 120 HGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------ATVF 153
Query: 271 EHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 154 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 43/252 (17%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVR-----SINKYREAAMIEIDVLQRLARHDIGGTR 154
           +G G FG+V   F     + VA+K  R      I++  E    E  +   L   +I   R
Sbjct: 15  IGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 155 CVQIRNWFDYRNHICIV--FEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            V ++       ++C+V  F + GP      R  S +  P D++     Q+   + ++H+
Sbjct: 73  GVCLK-----EPNLCLVMEFARGGP----LNRVLSGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 213 ---LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
              + +IH DLK  NIL++              +  ++G     +     +K+ DFG   
Sbjct: 124 EAIVPIIHRDLKSSNILIL--------------QKVENGDLSNKI-----LKITDFGLAR 164
Query: 270 FEHQDHSYVVSTRH-YRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL--EH 326
             H+      +  + + APEVI    ++   D+WS G +L EL +GE  F+  + L   +
Sbjct: 165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY 224
Query: 327 LAMMERVLGPLP 338
              M ++  P+P
Sbjct: 225 GVAMNKLALPIP 236

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGGTR 154
           ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+     
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE----- 65
Query: 155 CVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V ++
Sbjct: 66  --NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYL 121
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + + H D+KPEN+LL   + +K+ D+                            +T F
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------ATVF 155
Query: 271 EHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGGTR 154
           ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+     
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE----- 64
Query: 155 CVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V ++
Sbjct: 65  --NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYL 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + + H D+KPEN+LL   + +K+ D+                            +T F
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------ATVF 154
Query: 271 EHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR 154
           +S++G G  G V +        ++A K++    K   R   + E+ VL     H+     
Sbjct: 11  ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPY 65
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL- 213
            V     F     I I  E +     D + K + R  P  ++ ++   +++ + ++ E  
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH 124
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           +++H D+KP NIL+ S   +K+ D+                    + +LID  + +F   
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGV------------------SGQLIDSMANSF--- 163
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                V TR Y +PE + G  ++   D+WS+G  LVE+  G
Sbjct: 164 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR 154
           +S++G G  G V +        ++A K++    K   R   + E+ VL     H+     
Sbjct: 11  ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPY 65
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL- 213
            V     F     I I  E +     D + K + R  P  ++ ++   +++ + ++ E  
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKH 124
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           +++H D+KP NIL+ S   +K+ D+                    + +LID  + +F   
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGV------------------SGQLIDSMANSF--- 163
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                V TR Y +PE + G  ++   D+WS+G  LVE+  G
Sbjct: 164 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 137/349 (39%), Gaps = 77/349 (22%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
           +NL    KIL   G G+ G VV     + +  VA+K  R +  + + A++EI +L     
Sbjct: 14  KNLVVSEKIL---GYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDD 67
Query: 148 H-DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE-----LGR 201
           H ++    C +  + F Y     I  E    +L D +   +     + L +E     L R
Sbjct: 68  HPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI- 260
           Q+   VA +H L++IH DLKP+NIL+ ++        +F +         + L     + 
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENLRILISDFGLC 175
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-------WNYPCDLWSVGCILVELCS 313
           K +D G ++F   + +    T  +RAPE++                D++S+GC+   + S
Sbjct: 176 KKLDSGQSSF-RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
                                G  P           +KY R    +    G  S D M+ 
Sbjct: 235 K--------------------GKHPF---------GDKYSRESNII---RGIFSLDEMKC 262
Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           +            H      +  DL+  ++ +DP +R  A + LRHP F
Sbjct: 263 L------------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 37/222 (16%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR 154
           +S++G G  G V +        ++A K++    K   R   + E+ VL     H+     
Sbjct: 30  ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPY 84
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V     F     I I  E + G SL   L+K      P  ++ ++   +++ + ++ E 
Sbjct: 85  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREK 142
Query: 214 -RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
            +++H D+KP NIL+ S   +K+ D+                    + +LID  + +F  
Sbjct: 143 HKIMHRDVKPSNILVNSRGEIKLCDF------------------GVSGQLIDSMANSF-- 182
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                 V TR Y +PE + G  ++   D+WS+G  LVE+  G
Sbjct: 183 ------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 19  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 70
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y  +  + IV +   G SLY  L  +  + F +  + ++ RQ    + ++H   +
Sbjct: 71  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSI 129
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           IH DLK  NI L     VK+ D+   +  S+                   GS  FE    
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWS-----------------GSHQFEQLSG 172
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           S +     + APEVI     N   +  D+++ G +L EL +G+  +    N + +  M
Sbjct: 173 SIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 225

>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2 Length = 345

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 30/192 (15%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G FG +   F   K E  A  +V+   +       E+   QR+A+ D     C++ 
Sbjct: 44  KIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKD-----CIKK 98
Query: 159 ---RNWFDY----------------RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
              R   DY                R++  +V E+LG  L     +N   +F    V +L
Sbjct: 99  WIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG--TFKKSTVLQL 156
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILL--VSAEYVKVPDYKFLSRSSKDGSY--FKNLP 255
           G ++L+ + ++HE   +H D+K  N+LL   + + V + DY    R   +G++  ++  P
Sbjct: 157 GIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENP 216
Query: 256 KSSAIKLIDFGS 267
           +      I+F S
Sbjct: 217 RKGHNGTIEFTS 228

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 43  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 94
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y  +  + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 95  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 153
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           IH DLK  NI L     VK+ D+   +  S+                   GS  FE    
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----------------GSHQFEQLSG 196
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           S +     + APEVI     N   +  D+++ G +L EL +G+  +    N + +  M
Sbjct: 197 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGGTR 154
           ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+     
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE----- 64
Query: 155 CVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V ++
Sbjct: 65  --NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYL 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + + H D+KPEN+LL   + +K+ D+                            +T F
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------ATVF 154
Query: 271 EHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGGTR 154
           ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+     
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE----- 64
Query: 155 CVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V ++
Sbjct: 65  --NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYL 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + + H D+KPEN+LL   + +K+ D+                            +T F
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------ATVF 154
Query: 271 EHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 35  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 86
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y  +  + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 87  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 145
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           IH DLK  NI L     VK+ D+   +  S+                   GS  FE    
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----------------GSHQFEQLSG 188
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           S +     + APEVI     N   +  D+++ G +L EL +G+  +    N + +  M
Sbjct: 189 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 241

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 24/99 (24%)
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           ++H DLKP N+ L   + VK+ D+      + D S+ K                      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF-------------------- 176
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
               V T +Y +PE +  + +N   D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGGTR 154
           ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+     
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE----- 64
Query: 155 CVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V ++
Sbjct: 65  --NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYL 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + + H D+KPEN+LL   + +K+ D+                            +T F
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------ATVF 154
Query: 271 EHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 16  KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL ++L+K+  R   I L+ +   Q+ + + 
Sbjct: 76  IVKYKGV---CYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLL-QYTSQICKGME 131
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK-NLPKSSAIKLIDFGS 267
           ++   R IH DL   NIL+ +   VK+ D+       +D    K   P  S I       
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 184
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                           + APE +    ++   D+WS G +L EL
Sbjct: 185 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 213

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 135/345 (39%), Gaps = 73/345 (21%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
           +NL    KIL   G G+ G VV     + +  VA+K  R +  + + A++EI +L     
Sbjct: 32  KNLVVSEKIL---GYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDD 85
Query: 148 H-DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE-----LGR 201
           H ++    C +  + F Y     I  E    +L D +   +     + L +E     L R
Sbjct: 86  HPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI- 260
           Q+   VA +H L++IH DLKP+NIL+ ++        +F +         + L     + 
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENLRILISDFGLC 193
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVI---LGLGWNYPCDLWSVGCILVELCSGEAL 317
           K +D G   F   + +    T  +RAPE++            D++S+GC+   + S    
Sbjct: 194 KKLDSGQXXF-RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK--- 249
Query: 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
                            G  P           +KY R    +    G  S D M+ +   
Sbjct: 250 -----------------GKHPF---------GDKYSRESNII---RGIFSLDEMKCL--- 277
Query: 378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                    H      +  DL+  ++ +DP +R  A + LRHP F
Sbjct: 278 ---------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGGTR 154
           ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+     
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE----- 65
Query: 155 CVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V ++
Sbjct: 66  --NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYL 121
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + + H D+KPEN+LL   + +K+ D+                            +T F
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------ATVF 155
Query: 271 EHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 135/345 (39%), Gaps = 73/345 (21%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
           +NL    KIL   G G+ G VV     + +  VA+K  R +  + + A++EI +L     
Sbjct: 32  KNLVVSEKIL---GYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDD 85
Query: 148 H-DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE-----LGR 201
           H ++    C +  + F Y     I  E    +L D +   +     + L +E     L R
Sbjct: 86  HPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI- 260
           Q+   VA +H L++IH DLKP+NIL+ ++        +F +         + L     + 
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENLRILISDFGLC 193
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVI---LGLGWNYPCDLWSVGCILVELCSGEAL 317
           K +D G   F   + +    T  +RAPE++            D++S+GC+   + S    
Sbjct: 194 KKLDSGQXXF-RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK--- 249
Query: 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
                            G  P           +KY R    +    G  S D M+ +   
Sbjct: 250 -----------------GKHPF---------GDKYSRESNII---RGIFSLDEMKCL--- 277
Query: 378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                    H      +  DL+  ++ +DP +R  A + LRHP F
Sbjct: 278 ---------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 102/248 (41%), Gaps = 38/248 (15%)
Query: 95  KILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
           KI   +G G FG+V         +++  VAIK ++S    K R   + E  ++ +    +
Sbjct: 36  KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 95
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           +     + +         + I+ E +   SL  FLR+N  +   I LV  L R +   + 
Sbjct: 96  V-----IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML-RGIAAGMK 149
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           ++ ++  +H DL   NIL+ S    KV D+   +FL   + D +Y   L     I+    
Sbjct: 150 YLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR---- 205
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL 324
                             + APE I    +    D+WS G ++ E+ S GE  +    N 
Sbjct: 206 ------------------WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ 247
Query: 325 EHLAMMER 332
           + +  +E+
Sbjct: 248 DVINAIEQ 255

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGGTR 154
           ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+     
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE----- 64
Query: 155 CVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V ++
Sbjct: 65  --NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYL 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + + H D+KPEN+LL   + +K+ D+                            +T F
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------ATVF 154
Query: 271 EHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGGTR 154
           ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+     
Sbjct: 10  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE----- 64
Query: 155 CVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V ++
Sbjct: 65  --NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYL 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + + H D+KPEN+LL   + +K+ D+                            +T F
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------ATVF 154
Query: 271 EHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 102/245 (41%), Gaps = 41/245 (16%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDVLQRLARHDIGGTRC 155
           +G G FG+V  C      +L A K +      +    + AM+E  +L ++    I     
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI----- 247
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-----LYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           V +   F+ +  +C+V   +        +Y+    N     P  +      Q++  +  +
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT--AQIVSGLEHL 305
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H+  +I+ DLKPEN+LL     V++ D   L+   K G                      
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLG-LAVELKAG---------------------- 342
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-ENLEHLAM 329
           + +   Y   T  + APE++LG  +++  D +++G  L E+ +    F+   E +E+  +
Sbjct: 343 QTKTKGY-AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
Query: 330 MERVL 334
            +RVL
Sbjct: 402 KQRVL 406

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 29/135 (21%)
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
           RQ++ +V + H+  ++H DLK EN+LL     +K+ D+ F S     G+       S   
Sbjct: 121 RQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGF-SNEFTVGNKLDTFCGSPP- 178
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQ 319
                                  Y APE+  G  ++ P  D+WS+G IL  L SG   F 
Sbjct: 179 -----------------------YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
Query: 320 THENLEHLAMMERVL 334
             +NL+ L   ERVL
Sbjct: 216 G-QNLKELR--ERVL 227

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 41/245 (16%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDVLQRLARHDIGGTRC 155
           +G G FG+V  C      +L A K +      +    + AM+E  +L ++    I     
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI----- 247
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-----LYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           V +   F+ +  +C+V   +        +Y+    N     P  +      Q++  +  +
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT--AQIVSGLEHL 305
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H+  +I+ DLKPEN+LL     V++ D                     A++L    + T 
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGL------------------AVELKAGQTKTK 347
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-ENLEHLAM 329
            +        T  + APE++LG  +++  D +++G  L E+ +    F+   E +E+  +
Sbjct: 348 GY------AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
Query: 330 MERVL 334
            +RVL
Sbjct: 402 KQRVL 406

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 41/245 (16%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDVLQRLARHDIGGTRC 155
           +G G FG+V  C      +L A K +      +    + AM+E  +L ++    I     
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI----- 247
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-----LYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           V +   F+ +  +C+V   +        +Y+    N     P  +      Q++  +  +
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT--AQIVSGLEHL 305
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H+  +I+ DLKPEN+LL     V++ D                     A++L    + T 
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGL------------------AVELKAGQTKTK 347
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-ENLEHLAM 329
            +        T  + APE++LG  +++  D +++G  L E+ +    F+   E +E+  +
Sbjct: 348 GY------AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
Query: 330 MERVL 334
            +RVL
Sbjct: 402 KQRVL 406

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 102/245 (41%), Gaps = 41/245 (16%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDVLQRLARHDIGGTRC 155
           +G G FG+V  C      +L A K +      +    + AM+E  +L ++    I     
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI----- 247
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-----LYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           V +   F+ +  +C+V   +        +Y+    N     P  +      Q++  +  +
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT--AQIVSGLEHL 305
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H+  +I+ DLKPEN+LL     V++ D   L+   K G                      
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLG-LAVELKAG---------------------- 342
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-ENLEHLAM 329
           + +   Y   T  + APE++LG  +++  D +++G  L E+ +    F+   E +E+  +
Sbjct: 343 QTKTKGY-AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
Query: 330 MERVL 334
            +RVL
Sbjct: 402 KQRVL 406

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 83/381 (21%), Positives = 139/381 (36%), Gaps = 134/381 (35%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKI-----VRSIN-KYREAAMIEIDVLQRLARHDIGGT 153
           +G+G++G V    +N+ + + AIKI     +R IN K  E    E+ ++++L   +I   
Sbjct: 34  IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIA-- 91
Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR---KNSYRSFPIDLVR------------ 197
              ++   ++   +IC+V E   G  L D L     +S     +D+V+            
Sbjct: 92  ---RLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE 148
Query: 198 -----------------------ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 234
                                   + RQ+  ++ ++H   + H D+KPEN L  +     
Sbjct: 149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN---- 204
Query: 235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF------EHQDHSYVVSTRHYRAP 287
                                KS  IKL+DFG S  F      E+   +    T ++ AP
Sbjct: 205 ---------------------KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP 243
Query: 288 EVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRA 345
           EV+     +Y   CD WS G +L                 HL +M  V  P P       
Sbjct: 244 EVLNTTNESYGPKCDAWSAGVLL-----------------HLLLMGAV--PFP------- 277
Query: 346 DRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI--DLLQGLL 403
                             G    D++  V        L  ++ +++    +  DLL  LL
Sbjct: 278 ------------------GVNDADTISQVLN----KKLCFENPNYNVLSPLARDLLSNLL 315
Query: 404 RYDPAERLKAREALRHPFFTR 424
             +  ER  A  AL+HP+ ++
Sbjct: 316 NRNVDERFDAMRALQHPWISQ 336

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 15  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 66
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y  +  + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 67  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 125
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           IH DLK  NI L     VK+ D+   +  S+                   GS  FE    
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----------------GSHQFEQLSG 168
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           S +     + APEVI     N   +  D+++ G +L EL +G+  +    N + +  M
Sbjct: 169 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 24/99 (24%)
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           ++H DLKP N+ L   + VK+ D+      + D S+ K                      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF-------------------- 176
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
               V T +Y +PE +  + +N   D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/335 (21%), Positives = 130/335 (38%), Gaps = 90/335 (26%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLARHDIGGTRC 155
           +G+G FG V    + +   +VA+K++      +E        EI++   L   +I     
Sbjct: 31  LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNI----- 85
Query: 156 VQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
           +++ N+F  R  I ++ E   P   LY  L+K+   +F       +  +L +++ + H  
Sbjct: 86  LRLYNYFYDRRRIYLILE-YAPRGELYKELQKSC--TFDEQRTATIMEELADALMYCHGK 142
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           ++IH D+KPEN+LL     +K+ D+ +         +  +L + +    +D         
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGW-------SVHAPSLRRKTMCGTLD--------- 186
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 333
                     Y  PE+I G   N   DLW +G +  EL  G   F++  + E        
Sbjct: 187 ----------YLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE-------- 228
Query: 334 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 393
                              +RR  ++D                 L+ P  +         
Sbjct: 229 ------------------TYRRIVKVD-----------------LKFPASVPTGAQ---- 249
Query: 394 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
              DL+  LLR++P+ERL   +   HP+   + RR
Sbjct: 250 ---DLISKLLRHNPSERLPLAQVSAHPWVRANSRR 281

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 42  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 93
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y  +  + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 94  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 152
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           IH DLK  NI L     VK+ D+   +  S+                   GS  FE    
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSHQFEQLSG 195
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           S +     + APEVI     N   +  D+++ G +L EL +G+  +    N + +  M
Sbjct: 196 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 248

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 35/246 (14%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
            L ++G G FG VV+      +  VAIK+++  +   +  + E  V+  L+       + 
Sbjct: 28  FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE-----KL 81
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           VQ+      +  I I+ E +    L ++LR+  +R F    + E+ + + E++ ++   +
Sbjct: 82  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
            +H DL   N L+     VKV D+  LSR   D  Y  ++     ++             
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEYTSSVGSKFPVR------------- 186
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL----FQTHENLEHLAMM 330
                    +  PEV++   ++   D+W+ G ++ E+ S   +    F   E  EH+A  
Sbjct: 187 ---------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
Query: 331 ERVLGP 336
            R+  P
Sbjct: 238 LRLYRP 243

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 43  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 94
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y  +  + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 95  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 153
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           IH DLK  NI L     VK+ D+   +  S+                   GS  FE    
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSHQFEQLSG 196
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           S +     + APEVI     N   +  D+++ G +L EL +G+  +    N + +  M
Sbjct: 197 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 49/232 (21%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI-- 150
           ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI +   L   ++  
Sbjct: 11  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINAMLNHENVVK 69
Query: 151 --GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
             G  R   I+  F        +F+++ P +            P    +    QL+  V 
Sbjct: 70  FYGHRREGNIQYLFLEYCSGGELFDRIEPDI----------GMPEPDAQRFFHQLMAGVV 119
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++H + + H D+KPEN+LL   + +K+ D+                            +T
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------AT 153
Query: 269 TFEHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            F + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 20  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 71
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y  +  + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 72  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 130
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           IH DLK  NI L     VK+ D+   +  S+                   GS  FE    
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSHQFEQLSG 173
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           S +     + APEVI     N   +  D+++ G +L EL +G+  +    N + +  M
Sbjct: 174 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226

>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K+  ++GEG+FG + E  +    + VAIK      + R +   ++    R  +   G   
Sbjct: 12  KVGRRIGEGSFGVIFEGTNLLNNQQVAIKF-----EPRRSDAPQLRDEYRTYKLLAG--- 63
Query: 155 CVQIRNWFDYRN---HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
           C  I N + +     H  +V + LGPSL D L     R F +  V    +Q+L  V  +H
Sbjct: 64  CTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIH 122
Query: 212 ELRLIHTDLKPENILL 227
           E  L++ D+KP+N L+
Sbjct: 123 EKSLVYRDIKPDNFLI 138

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 94/248 (37%), Gaps = 57/248 (22%)
Query: 93  RCKILSKMGEGTFGQVVEC--FDNEKKEL---VAIKIVRSINKYRE--AAMIEIDVLQRL 145
           R K+   +G G FGQV+E   F  +K      VA+K+++    + E  A M E+ +L  +
Sbjct: 30  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLRKN-----SYRSFPID 194
             H       + + N             + + F K G +L  +LR        Y+  P D
Sbjct: 90  GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKEAPED 141
Query: 195 LVREL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
           L ++            Q+ + + F+   + IH DL   NILL     VK+ D+       
Sbjct: 142 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 201
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
           KD  Y +       +K                      + APE I    +    D+WS G
Sbjct: 202 KDPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFG 239
Query: 306 CILVELCS 313
            +L E+ S
Sbjct: 240 VLLWEIFS 247

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 35/246 (14%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
            L ++G G FG VV+      +  VAIK+++  +   +  + E  V+  L+       + 
Sbjct: 19  FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE-----KL 72
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           VQ+      +  I I+ E +    L ++LR+  +R F    + E+ + + E++ ++   +
Sbjct: 73  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 131
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
            +H DL   N L+     VKV D+  LSR   D  Y  ++     ++             
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEYTSSVGSKFPVR------------- 177
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL----FQTHENLEHLAMM 330
                    +  PEV++   ++   D+W+ G ++ E+ S   +    F   E  EH+A  
Sbjct: 178 ---------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 228
Query: 331 ERVLGP 336
            R+  P
Sbjct: 229 LRLYRP 234

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 35/246 (14%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
            L ++G G FG VV+      +  VAIK+++  +   +  + E  V+  L+       + 
Sbjct: 12  FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE-----KL 65
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           VQ+      +  I I+ E +    L ++LR+  +R F    + E+ + + E++ ++   +
Sbjct: 66  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 124
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
            +H DL   N L+     VKV D+  LSR   D  Y  ++     ++             
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEYTSSVGSKFPVR------------- 170
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL----FQTHENLEHLAMM 330
                    +  PEV++   ++   D+W+ G ++ E+ S   +    F   E  EH+A  
Sbjct: 171 ---------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 221
Query: 331 ERVLGP 336
            R+  P
Sbjct: 222 LRLYRP 227

>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K+  ++GEG+FG + E  +    + VAIK      + R +   ++    R  +   G   
Sbjct: 13  KVGRRIGEGSFGVIFEGTNLLNNQQVAIKF-----EPRRSDAPQLRDEYRTYKLLAG--- 64
Query: 155 CVQIRNWFDYRN---HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
           C  I N + +     H  +V + LGPSL D L     R F +  V    +Q+L  V  +H
Sbjct: 65  CTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIH 123
Query: 212 ELRLIHTDLKPENILL 227
           E  L++ D+KP+N L+
Sbjct: 124 EKSLVYRDIKPDNFLI 139

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 17  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 68
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y  +  + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 69  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 127
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           IH DLK  NI L     VK+ D+   +  S+                   GS  FE    
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSHQFEQLSG 170
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           S +     + APEVI     N   +  D+++ G +L EL +G+  +    N + +  M
Sbjct: 171 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 223

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 101/241 (41%), Gaps = 46/241 (19%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K +S++G+G FG V  C      +    LVA+K ++ S    +     EI +L+ L    
Sbjct: 14  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 73
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPS--LYDFLRKNSYRSFPIDLVREL--GRQLLE 205
           I   R V   ++   R  + +V E L PS  L DFL+++  R   +D  R L    Q+ +
Sbjct: 74  IVKYRGV---SYGPGRQSLRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 126
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF-KNLPKSSAIKLID 264
            + ++   R +H DL   NIL+ S  +VK+ D+        D  Y+    P  S I    
Sbjct: 127 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI---- 182
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL-------CSGEAL 317
                              + APE +    ++   D+WS G +L EL       CS  A 
Sbjct: 183 ------------------FWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 224
Query: 318 F 318
           F
Sbjct: 225 F 225

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 135/349 (38%), Gaps = 77/349 (22%)
Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
           +NL    KIL   G G+ G VV     + +  VA+K  R +  + + A++EI +L     
Sbjct: 14  KNLVVSEKIL---GYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDD 67
Query: 148 H-DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE-----LGR 201
           H ++    C +  + F Y     I  E    +L D +   +     + L +E     L R
Sbjct: 68  HPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI- 260
           Q+   VA +H L++IH DLKP+NIL+ ++        +F +         + L     + 
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENLRILISDFGLC 175
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-------WNYPCDLWSVGCILVELCS 313
           K +D G   F    ++    T  +RAPE++                D++S+GC+   + S
Sbjct: 176 KKLDSGQXXFRXNLNN-PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
                                G  P           +KY R    +    G  S D M+ 
Sbjct: 235 K--------------------GKHPF---------GDKYSRESNII---RGIFSLDEMKC 262
Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           +            H      +  DL+  ++ +DP +R  A + LRHP F
Sbjct: 263 L------------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 35/246 (14%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
            L ++G G FG VV+      +  VAIK+++  +   +  + E  V+  L+       + 
Sbjct: 13  FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE-----KL 66
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           VQ+      +  I I+ E +    L ++LR+  +R F    + E+ + + E++ ++   +
Sbjct: 67  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
            +H DL   N L+     VKV D+  LSR   D  Y  ++     ++             
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEYTSSVGSKFPVR------------- 171
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL----FQTHENLEHLAMM 330
                    +  PEV++   ++   D+W+ G ++ E+ S   +    F   E  EH+A  
Sbjct: 172 ---------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
Query: 331 ERVLGP 336
            R+  P
Sbjct: 223 LRLYRP 228

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 101/241 (41%), Gaps = 46/241 (19%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K +S++G+G FG V  C      +    LVA+K ++ S    +     EI +L+ L    
Sbjct: 13  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 72
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPS--LYDFLRKNSYRSFPIDLVREL--GRQLLE 205
           I   R V   ++   R  + +V E L PS  L DFL+++  R   +D  R L    Q+ +
Sbjct: 73  IVKYRGV---SYGPGRQSLRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 125
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF-KNLPKSSAIKLID 264
            + ++   R +H DL   NIL+ S  +VK+ D+        D  Y+    P  S I    
Sbjct: 126 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI---- 181
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL-------CSGEAL 317
                              + APE +    ++   D+WS G +L EL       CS  A 
Sbjct: 182 ------------------FWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 223
Query: 318 F 318
           F
Sbjct: 224 F 224

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 20  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 71
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y  +  + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 72  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 130
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           IH DLK  NI L     VK+ D+   +  S+                   GS  FE    
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSHQFEQLSG 173
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           S +     + APEVI     N   +  D+++ G +L EL +G+  +    N + +  M
Sbjct: 174 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 37/238 (15%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 15  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 66
Query: 159 RNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y  +  + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 67  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 125
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           IH DLK  NI L     VK+ D+   +  S+                   GS  FE    
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSHQFEQLSG 168
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           S +     + APEVI     N   +  D+++ G +L EL +G+  +    N + +  M
Sbjct: 169 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 97/230 (42%), Gaps = 45/230 (19%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGGTR 154
           ++  +GEG  G+V    +   +E VA+KIV           I+ ++ + ++  H+     
Sbjct: 10  LVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE----- 64
Query: 155 CVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V ++
Sbjct: 65  --NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYL 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + + H D+KPEN+LL   + +K+ D+                            +T F
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGL--------------------------ATVF 154
Query: 271 EHQDHSYVVS----TRHYRAPEVILGLGWNY-PCDLWSVGCILVELCSGE 315
            + +   +++    T  Y APE++    ++  P D+WS G +L  + +GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 37/238 (15%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 15  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 66
Query: 159 RNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y     + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 67  LLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 125
Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           IH DLK  NI L     VK+ D+   +  S+                   GS  FE    
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSHQFEQLSG 168
Query: 276 SYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
           S +     + APEVI     N   +  D+++ G +L EL +G+  +    N + +  M
Sbjct: 169 SIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 101/241 (41%), Gaps = 46/241 (19%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K +S++G+G FG V  C      +    LVA+K ++ S    +     EI +L+ L    
Sbjct: 26  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 85
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPS--LYDFLRKNSYRSFPIDLVREL--GRQLLE 205
           I   R V   ++   R  + +V E L PS  L DFL+++  R   +D  R L    Q+ +
Sbjct: 86  IVKYRGV---SYGPGRQSLRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 138
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF-KNLPKSSAIKLID 264
            + ++   R +H DL   NIL+ S  +VK+ D+        D  Y+    P  S I    
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI---- 194
Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL-------CSGEAL 317
                              + APE +    ++   D+WS G +L EL       CS  A 
Sbjct: 195 ------------------FWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 236
Query: 318 F 318
           F
Sbjct: 237 F 237

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 35/246 (14%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
            L ++G G FG VV+      +  VAIK+++  +   +  + E  V+  L+       + 
Sbjct: 8   FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE-----KL 61
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           VQ+      +  I I+ E +    L ++LR+  +R F    + E+ + + E++ ++   +
Sbjct: 62  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 120
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
            +H DL   N L+     VKV D+  LSR   D  Y  ++     ++             
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEYTSSVGSKFPVR------------- 166
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL----FQTHENLEHLAMM 330
                    +  PEV++   ++   D+W+ G ++ E+ S   +    F   E  EH+A  
Sbjct: 167 ---------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 217
Query: 331 ERVLGP 336
            R+  P
Sbjct: 218 LRLYRP 223

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 94/248 (37%), Gaps = 57/248 (22%)
Query: 93  RCKILSKMGEGTFGQVVEC--FDNEKKEL---VAIKIVRSINKYRE--AAMIEIDVLQRL 145
           R K+   +G G FGQV+E   F  +K      VA+K+++    + E  A M E+ +L  +
Sbjct: 65  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 124
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLRKN-----SYRSFPID 194
             H       + + N             + + F K G +L  +LR        Y+  P D
Sbjct: 125 GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPED 176
Query: 195 LVREL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
           L ++            Q+ + + F+   + IH DL   NILL     VK+ D+       
Sbjct: 177 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 236
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
           KD  Y +       +K                      + APE I    +    D+WS G
Sbjct: 237 KDPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFG 274
Query: 306 CILVELCS 313
            +L E+ S
Sbjct: 275 VLLWEIFS 282

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 94/248 (37%), Gaps = 57/248 (22%)
Query: 93  RCKILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
           R K+   +G G FGQV+E   F  +K      VA+K+++    + E  A M E+ +L  +
Sbjct: 28  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLRKN-----SYRSFPID 194
             H       + + N             + + F K G +L  +LR        Y+  P D
Sbjct: 88  GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPED 139
Query: 195 LVREL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
           L ++            Q+ + + F+   + IH DL   NILL     VK+ D+       
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 199
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
           KD  Y +       +K                      + APE I    +    D+WS G
Sbjct: 200 KDPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFG 237
Query: 306 CILVELCS 313
            +L E+ S
Sbjct: 238 VLLWEIFS 245

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 39/237 (16%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIG 151
            L  +G+G+FG+V+        EL A+KI++      +   E  M+E  VL    +    
Sbjct: 345 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPF- 403
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRS-FPIDLVRELGRQLLESVA 208
                Q+ + F   + +  V E +  G  +Y   +   ++    +    E+   L     
Sbjct: 404 ---LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF---- 456
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           F+    +I+ DLK +N++L S  ++K+ D+     +  DG   K                
Sbjct: 457 FLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF-------------- 502
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
                       T  Y APE+I    +    D W+ G +L E+ +G+A F+  +  E
Sbjct: 503 ----------CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 43/227 (18%)
Query: 98  SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEI---DVLQRLARHDIGGTR 154
           +KMGEG FG V + + N     VA+K        + AAM++I   ++ Q+  +      +
Sbjct: 37  NKMGEGGFGVVYKGYVNNTT--VAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 86
Query: 155 C-----VQIRNWFDYRNHICIVFEKL-GPSLYDFLR-KNSYRSFPIDLVRELGRQLLESV 207
           C     V++  +    + +C+V+  +   SL D L   +        +  ++ +     +
Sbjct: 87  CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
            F+HE   IH D+K  NILL  A   K+ D+     S K                  F  
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FAQ 188
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           T       S +V T  Y APE + G       D++S G +L+E+ +G
Sbjct: 189 TVMX----SRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 32/232 (13%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
            + ++G G FG +V       K+ VAIK +R      E  + E +V+ +L+       + 
Sbjct: 11  FVQEIGSGQFG-LVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH-----PKL 64
Query: 156 VQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           VQ+      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ E  
Sbjct: 65  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAS 123
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +IH DL   N L+   + +KV D+  ++R   D  Y  +      +K             
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------- 169
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325
                    + +PEV     ++   D+WS G ++ E+ S G+  ++   N E
Sbjct: 170 ---------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 38/248 (15%)
Query: 95  KILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
           KI   +G G FG+V         +K+  VAIK ++     + R   + E  ++ +    +
Sbjct: 17  KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 76
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     +++         + I+ E +   +L  FLR N  +   I LV  L R +   + 
Sbjct: 77  I-----IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML-RGIASGMR 130
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           ++ E+  +H DL   NIL+ S    KV D+   +FL  +S D +Y  +L     I+    
Sbjct: 131 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIR---- 186
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL 324
                             + APE I    +    D WS G ++ E+ S GE  +    N 
Sbjct: 187 ------------------WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ 228
Query: 325 EHLAMMER 332
           + +  +E+
Sbjct: 229 DVINAIEQ 236

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           ++H DLKP N+ L   + VK+ D+      + D  + K                      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF-------------------- 176
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
               V T +Y +PE +  + +N   D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 39/237 (16%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIG 151
            L  +G+G+FG+V+        EL A+KI++      +   E  M+E  VL    +    
Sbjct: 24  FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPF- 82
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRS-FPIDLVRELGRQLLESVA 208
                Q+ + F   + +  V E +  G  +Y   +   ++    +    E+   L     
Sbjct: 83  ---LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF---- 135
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           F+    +I+ DLK +N++L S  ++K+ D+     +  DG   K                
Sbjct: 136 FLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF-------------- 181
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
                       T  Y APE+I    +    D W+ G +L E+ +G+A F+  +  E
Sbjct: 182 ----------CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 35/192 (18%)
Query: 137 IEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPID 194
           +E+ +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +
Sbjct: 103 MEVVLLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEE 157
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
           L R    Q+LE+V   H   ++H D+K ENIL+             L+R           
Sbjct: 158 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILID------------LNRGE--------- 196
Query: 255 PKSSAIKLIDFGS-TTFEHQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELC 312
                +KLIDFGS    +   ++    TR Y  PE I    ++     +WS+G +L ++ 
Sbjct: 197 -----LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
Query: 313 SGEALFQTHENL 324
            G+  F+  E +
Sbjct: 252 CGDIPFEHDEEI 263

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 104/246 (42%), Gaps = 35/246 (14%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
            L ++G G FG VV+      +  VAIK+++  +   +  + E  V+  L+       + 
Sbjct: 13  FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE-----KL 66
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           VQ+      +  I I+ E +    L ++LR+  +R F    + E+ + + E++ ++   +
Sbjct: 67  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
            +H DL   N L+     VKV D+  LSR   D  Y  +      ++             
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEYTSSRGSKFPVR------------- 171
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL----FQTHENLEHLAMM 330
                    +  PEV++   ++   D+W+ G ++ E+ S   +    F   E  EH+A  
Sbjct: 172 ---------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
Query: 331 ERVLGP 336
            R+  P
Sbjct: 223 LRLYRP 228

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 94/235 (40%), Gaps = 48/235 (20%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHDIGG 152
           +G G FG+VVE   F   K++ V   A+K+++S      +EA M E+ ++  L +H+   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 153 TRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYR-----SFPI--------DLVRE 198
              V +     +   + ++ E      L +FLR+ S       +F I        DL+  
Sbjct: 111 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH- 168
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+ + +AF+     IH D+   N+LL +    K+ D+        D +Y        
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 259 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
            +K                      + APE I    +    D+WS G +L E+ S
Sbjct: 229 PVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 94/246 (38%), Gaps = 53/246 (21%)
Query: 93  RCKILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
           R K+   +G G FGQV+E   F  +K      VA+K+++    + E  A M E+ +L  +
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 146 ARH----DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKN-----SYRSFPIDLV 196
             H    ++ G  C +           C    K G +L  +LR        Y+  P DL 
Sbjct: 79  GHHLNVVNLLGA-CTKPGGPLMVITEFC----KFG-NLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 197 REL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247
           ++            Q+ + + F+   + IH DL   NILL     VK+ D+       KD
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 307
             Y +       +K                      + APE I    +    D+WS G +
Sbjct: 193 PDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVL 230
Query: 308 LVELCS 313
           L E+ S
Sbjct: 231 LWEIFS 236

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 94/235 (40%), Gaps = 48/235 (20%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHDIGG 152
           +G G FG+VVE   F   K++ V   A+K+++S      +EA M E+ ++  L +H+   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 153 TRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYR-----SFPI--------DLVRE 198
              V +     +   + ++ E      L +FLR+ S       +F I        DL+  
Sbjct: 111 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH- 168
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+ + +AF+     IH D+   N+LL +    K+ D+        D +Y        
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 259 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
            +K                      + APE I    +    D+WS G +L E+ S
Sbjct: 229 PVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 32/232 (13%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
            + ++G G FG +V       K+ VAIK +R      E  + E +V+ +L+       + 
Sbjct: 14  FVQEIGSGQFG-LVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH-----PKL 67
Query: 156 VQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           VQ+      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ E  
Sbjct: 68  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC 126
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +IH DL   N L+   + +KV D+  ++R   D  Y  +      +K             
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------- 172
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325
                    + +PEV     ++   D+WS G ++ E+ S G+  ++   N E
Sbjct: 173 ---------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 215

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 94/246 (38%), Gaps = 53/246 (21%)
Query: 93  RCKILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
           R K+   +G G FGQV+E   F  +K      VA+K+++    + E  A M E+ +L  +
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 146 ARH----DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKN-----SYRSFPIDLV 196
             H    ++ G  C +           C    K G +L  +LR        Y+  P DL 
Sbjct: 79  GHHLNVVNLLGA-CTKPGGPLMVITEFC----KFG-NLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 197 REL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247
           ++            Q+ + + F+   + IH DL   NILL     VK+ D+       KD
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 307
             Y +       +K                      + APE I    +    D+WS G +
Sbjct: 193 PDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVL 230
Query: 308 LVELCS 313
           L E+ S
Sbjct: 231 LWEIFS 236

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I I F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 80  R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR     +Y  +      IK                 
Sbjct: 136 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 177
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 178 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 233 RPEGCPEKVYELMRA 247

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMI--EIDVLQRLARHDI 150
           +++  +G G FG+V        +++ A+K++      K  ++A    E D++        
Sbjct: 77  EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-----A 131
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                VQ+   F    ++ +V E + G  L + +   S    P    R    +++ ++  
Sbjct: 132 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVVLALDA 188
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H +  IH D+KP+N+LL                            KS  +KL DFG+  
Sbjct: 189 IHSMGFIHRDVKPDNMLL---------------------------DKSGHLKLADFGTCM 221
Query: 270 FEHQDH----SYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALF 318
             +++        V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 222 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I I F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 85  R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR     +Y  +      IK                 
Sbjct: 141 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 182
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 183 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 238 RPEGCPEKVYELMRA 252

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 111/295 (37%), Gaps = 70/295 (23%)
Query: 93  RCKILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
           R  +   +G G FGQV+E   F  +K      VA+K+++    + E  A M E+ +L  +
Sbjct: 28  RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 146 ARH----DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLR---------KNSYRSF- 191
             H    ++ G  C +          + + F K G +L  +LR         K+ Y+ F 
Sbjct: 88  GHHLNVVNLLGA-CTKPGGPL----MVIVEFCKFG-NLSTYLRSKRNEFVPYKDLYKDFL 141
Query: 192 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251
            ++ +     Q+ + + F+   + IH DL   NILL     VK+ D+       KD  Y 
Sbjct: 142 TLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYV 201
Query: 252 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
           +       +K                      + APE I    +    D+WS G +L E+
Sbjct: 202 RKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEI 239
Query: 312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT 366
            S                    LG  P+  V + D    +  + G R+  PD  T
Sbjct: 240 FS--------------------LGASPYPGV-KIDEEFXRRLKEGTRMRAPDYTT 273

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 104/308 (33%), Gaps = 85/308 (27%)
Query: 100 MGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVLQRLARH---- 148
           +G G FG+VVE        ++    VA+K+++       REA M E+ VL  L  H    
Sbjct: 54  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 149 ------DIGGTRCVQIRNWFDY--------RNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
                  IGG   V I  +  Y        R     +  K  P++ +             
Sbjct: 114 NLLGACTIGGPTLV-ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE---- 168
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
            +     Q+ + +AF+     IH DL   NILL      K+                   
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKI------------------- 209
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPCDLWSVGCILV 309
                    DFG       D +YVV         + APE I    + +  D+WS G  L 
Sbjct: 210 --------CDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 261
Query: 310 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR- 368
           EL S                    LG  P+   +  D +  K  + G R+  P+ A +  
Sbjct: 262 ELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRMLSPEHAPAEM 300
Query: 369 -DSMRAVW 375
            D M+  W
Sbjct: 301 YDIMKTCW 308

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 32/232 (13%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
            + ++G G FG +V       K+ VAIK +R      E  + E +V+ +L+       + 
Sbjct: 11  FVQEIGSGQFG-LVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH-----PKL 64
Query: 156 VQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           VQ+      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ E  
Sbjct: 65  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC 123
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +IH DL   N L+   + +KV D+  ++R   D  Y  +      +K             
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------- 169
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325
                    + +PEV     ++   D+WS G ++ E+ S G+  ++   N E
Sbjct: 170 ---------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMI--EIDVLQRLARHDI 150
           +++  +G G FG+V        +++ A+K++      K  ++A    E D++        
Sbjct: 72  EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-----A 126
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                VQ+   F    ++ +V E + G  L + +   S    P    R    +++ ++  
Sbjct: 127 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVVLALDA 183
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H +  IH D+KP+N+LL                            KS  +KL DFG+  
Sbjct: 184 IHSMGFIHRDVKPDNMLL---------------------------DKSGHLKLADFGTCM 216
Query: 270 FEHQDH----SYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALF 318
             +++        V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 43/227 (18%)
Query: 98  SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEI---DVLQRLARHDIGGTR 154
           +KMGEG FG V + + N     VA+K        + AAM++I   ++ Q+  +      +
Sbjct: 37  NKMGEGGFGVVYKGYVNNTT--VAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 86
Query: 155 C-----VQIRNWFDYRNHICIVFEKL-GPSLYDFLR-KNSYRSFPIDLVRELGRQLLESV 207
           C     V++  +    + +C+V+  +   SL D L   +        +  ++ +     +
Sbjct: 87  CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
            F+HE   IH D+K  NILL  A   K+ D+     S K                  F  
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FAQ 188
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           T    +    +V T  Y APE + G       D++S G +L+E+ +G
Sbjct: 189 TVMXXR----IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 108/308 (35%), Gaps = 85/308 (27%)
Query: 100 MGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVLQRLARH---- 148
           +G G FG+VVE        ++    VA+K+++       REA M E+ VL  L  H    
Sbjct: 31  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 149 ------DIGGTRCVQIRNWFDY--------RNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
                  IGG   V I  +  Y        R     +  K  P++ +             
Sbjct: 91  NLLGACTIGGPTLV-ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE---- 145
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
            +     Q+ + +AF+     IH DL   NILL      K+ D+  L+R  K+       
Sbjct: 146 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG-LARDIKN------- 197
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPCDLWSVGCILV 309
                              D +YVV         + APE I    + +  D+WS G  L 
Sbjct: 198 -------------------DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 238
Query: 310 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR- 368
           EL S                    LG  P+   +  D +  K  + G R+  P+ A +  
Sbjct: 239 ELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRMLSPEHAPAEM 277
Query: 369 -DSMRAVW 375
            D M+  W
Sbjct: 278 YDIMKTCW 285

>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2 Length = 313

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 97/242 (40%), Gaps = 40/242 (16%)
Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH 148
           ++ P  ++  K+G G FG++    +    E VAIK+   I        +E    ++L+  
Sbjct: 1   SMGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPIKSRAPQLHLEYRFYKQLS-- 57
Query: 149 DIGGTRCV-QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
               T  V Q+  +     +  +V E LGPSL D       R+F +  V  +  QL+  +
Sbjct: 58  ---ATEGVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLITRM 113
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 266
            ++H   LI+ D+KPEN L      V  P  K                +  AI +IDFG 
Sbjct: 114 EYVHTKSLIYRDVKPENFL------VGRPGTK----------------RQHAIHIIDFGL 151
Query: 267 ---------STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 317
                         +++H  +  T  Y +    LG   +   DL ++G + +    G   
Sbjct: 152 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP 211
Query: 318 FQ 319
           +Q
Sbjct: 212 WQ 213

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 108/308 (35%), Gaps = 85/308 (27%)
Query: 100 MGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVLQRLARH---- 148
           +G G FG+VVE        ++    VA+K+++       REA M E+ VL  L  H    
Sbjct: 47  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 149 ------DIGGTRCVQIRNWFDY--------RNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
                  IGG   V I  +  Y        R     +  K  P++ +             
Sbjct: 107 NLLGACTIGGPTLV-ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE---- 161
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
            +     Q+ + +AF+     IH DL   NILL      K+ D+  L+R  K+       
Sbjct: 162 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG-LARDIKN------- 213
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPCDLWSVGCILV 309
                              D +YVV         + APE I    + +  D+WS G  L 
Sbjct: 214 -------------------DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 254
Query: 310 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR- 368
           EL S                    LG  P+   +  D +  K  + G R+  P+ A +  
Sbjct: 255 ELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRMLSPEHAPAEM 293
Query: 369 -DSMRAVW 375
            D M+  W
Sbjct: 294 YDIMKTCW 301

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 108/308 (35%), Gaps = 85/308 (27%)
Query: 100 MGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVLQRLARH---- 148
           +G G FG+VVE        ++    VA+K+++       REA M E+ VL  L  H    
Sbjct: 54  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 149 ------DIGGTRCVQIRNWFDY--------RNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
                  IGG   V I  +  Y        R     +  K  P++ +             
Sbjct: 114 NLLGACTIGGPTLV-ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE---- 168
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
            +     Q+ + +AF+     IH DL   NILL      K+ D+  L+R  K+       
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG-LARDIKN------- 220
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPCDLWSVGCILV 309
                              D +YVV         + APE I    + +  D+WS G  L 
Sbjct: 221 -------------------DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 261
Query: 310 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR- 368
           EL S                    LG  P+   +  D +  K  + G R+  P+ A +  
Sbjct: 262 ELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRMLSPEHAPAEM 300
Query: 369 -DSMRAVW 375
            D M+  W
Sbjct: 301 YDIMKTCW 308

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 96/237 (40%), Gaps = 48/237 (20%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMI--EIDVLQRLARHDI 150
           +++  +G G FG+V        +++ A+K++      K  ++A    E D++        
Sbjct: 77  EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-----A 131
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                VQ+   F    ++ +V E + G  L + +   S    P    R    +++ ++  
Sbjct: 132 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVVLALDA 188
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H +  IH D+KP+N+LL                            KS  +KL DFG+  
Sbjct: 189 IHSMGFIHRDVKPDNMLL---------------------------DKSGHLKLADFGTCM 221
Query: 270 FEHQDH----SYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALF 318
             +++        V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 222 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 42/244 (17%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM-----IEIDVLQRLARHDIGGT 153
           ++G G FG V + +   KK +  + +    N+  + A+      E +V+Q+L    I   
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI--V 434
Query: 154 RCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           R + I    +W      + +   +LGP L  +L++N  R      + EL  Q+   + ++
Sbjct: 435 RMIGICEAESWM-----LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYL 486
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
            E   +H DL   N+LLV+  Y K+ D+        D +Y+K                  
Sbjct: 487 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA----------------- 529
Query: 271 EHQDHS-YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA 328
             Q H  + V    + APE I    ++   D+WS G ++ E  S G+  ++  +  E  A
Sbjct: 530 --QTHGKWPVK---WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 584
Query: 329 MMER 332
           M+E+
Sbjct: 585 MLEK 588

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 101/233 (43%), Gaps = 34/233 (14%)
Query: 96  ILSKMGEGTFGQV-VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
            + ++G G FG V +  + N+ K  VAIK +R      E  + E +V+ +L+       +
Sbjct: 9   FVQEIGSGQFGLVHLGYWLNKDK--VAIKTIREGAMSEEDFIEEAEVMMKLSH-----PK 61
Query: 155 CVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ E 
Sbjct: 62  LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
            +IH DL   N L+   + +KV D+  ++R   D  Y  +      +K            
Sbjct: 121 CVIHRDLAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------ 167
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325
                     + +PEV     ++   D+WS G ++ E+ S G+  ++   N E
Sbjct: 168 ----------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 210

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 108/308 (35%), Gaps = 85/308 (27%)
Query: 100 MGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKY--REAAMIEIDVLQRLARH---- 148
           +G G FG+VVE        ++    VA+K+++       REA M E+ VL  L  H    
Sbjct: 49  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 149 ------DIGGTRCVQIRNWFDY--------RNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
                  IGG   V I  +  Y        R     +  K  P++ +             
Sbjct: 109 NLLGACTIGGPTLV-ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE---- 163
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
            +     Q+ + +AF+     IH DL   NILL      K+ D+  L+R  K+       
Sbjct: 164 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG-LARDIKN------- 215
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTR-----HYRAPEVILGLGWNYPCDLWSVGCILV 309
                              D +YVV         + APE I    + +  D+WS G  L 
Sbjct: 216 -------------------DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 256
Query: 310 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR- 368
           EL S                    LG  P+   +  D +  K  + G R+  P+ A +  
Sbjct: 257 ELFS--------------------LGSSPYPG-MPVDSKFYKMIKEGFRMLSPEHAPAEM 295
Query: 369 -DSMRAVW 375
            D M+  W
Sbjct: 296 YDIMKTCW 303

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 42/244 (17%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM-----IEIDVLQRLARHDIGGT 153
           ++G G FG V + +   KK +  + +    N+  + A+      E +V+Q+L    I   
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI--V 433
Query: 154 RCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           R + I    +W      + +   +LGP L  +L++N  R      + EL  Q+   + ++
Sbjct: 434 RMIGICEAESWM-----LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYL 485
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
            E   +H DL   N+LLV+  Y K+ D+        D +Y+K                  
Sbjct: 486 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA----------------- 528
Query: 271 EHQDHS-YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA 328
             Q H  + V    + APE I    ++   D+WS G ++ E  S G+  ++  +  E  A
Sbjct: 529 --QTHGKWPVK---WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 583
Query: 329 MMER 332
           M+E+
Sbjct: 584 MLEK 587

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I I F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 80  R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR     +Y  +      IK                 
Sbjct: 136 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 177
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 178 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 233 RPEGCPEKVYELMRA 247

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           +G+G FGQ ++    E  E++ +K ++R   + +   + E+ V++ L   ++     V  
Sbjct: 18  LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           ++       +  + E +       + K+    +P        + +   +A++H + +IH 
Sbjct: 78  KD-----KRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHR 132
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS-SAIKLIDFGSTTFEHQDHSY 277
           DL   N L+   + V V D+  L+R   D    K  P+   ++K  D        +    
Sbjct: 133 DLNSHNCLVRENKNVVVADFG-LARLMVDE---KTQPEGLRSLKKPD-------RKKRYT 181
Query: 278 VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
           VV   ++ APE+I G  ++   D++S G +L E+
Sbjct: 182 VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 112/289 (38%), Gaps = 65/289 (22%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K+L  +G+G FG V+    + +   VA+K +++ +   +A + E  V+ +L RH    + 
Sbjct: 196 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 247
Query: 155 CVQIRNWF-DYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            VQ+     + +  + IV E +   SL D+LR         D + +    + E++ ++  
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
              +H DL   N+L+      KV D+     +S      K LP                 
Sbjct: 308 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK--------------- 351
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                      + APE +    ++   D+WS G +L E+ S                   
Sbjct: 352 -----------WTAPEALREKKFSTKSDVWSFGILLWEIYS------------------- 381
Query: 333 VLGPLPHHMVIRADR--RAEKYFRRGARLDWPDGA--TSRDSMRAVWKL 377
             G +P+  +   D   R EK    G ++D PDG      D M+  W L
Sbjct: 382 -FGRVPYPRIPLKDVVPRVEK----GYKMDAPDGCPPAVYDVMKNCWHL 425

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 21  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I I F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 81  R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR                   +  G T   H    + 
Sbjct: 137 DLAARNCLVGENHLVKVADFG-LSR-------------------LMTGDTXTAHAGAKFP 176
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
           +    + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 177 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 233
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 234 RPEGCPEKVYELMRA 248

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 38/248 (15%)
Query: 95  KILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
           KI   +G G FG+V         +++  VAIK ++S    K R   + E  ++ +    +
Sbjct: 10  KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           +     + +         + I+ E +   SL  FLR+N  +   I LV  L R +   + 
Sbjct: 70  V-----IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML-RGIAAGMK 123
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           ++ ++  +H  L   NIL+ S    KV D+   +FL   + D +Y   L     I+    
Sbjct: 124 YLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR---- 179
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL 324
                             + APE I    +    D+WS G ++ E+ S GE  +    N 
Sbjct: 180 ------------------WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ 221
Query: 325 EHLAMMER 332
           + +  +E+
Sbjct: 222 DVINAIEQ 229

>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With Inhibitor Length = 330

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 92  PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG 151
           P  ++  K+G G FG++    +    E VAIK+     +  ++   ++ +  R  +    
Sbjct: 9   PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-----EPMKSRAPQLHLEYRFYKQLGS 63
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
           G    Q+  +     +  +V E LGPSL D       R+F +  V  +  QL+  + ++H
Sbjct: 64  GDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVH 122
Query: 212 ELRLIHTDLKPENILL-----VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
              LI+ D+KPEN L+      + + + + D+  L++   D    K++P           
Sbjct: 123 SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFA-LAKEYIDPETKKHIP----------- 170
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
                +++H  +  T  Y +    LG   +   DL ++G + +    G   +Q
Sbjct: 171 -----YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 218

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 36/230 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G G FG+V  C   +  ++ A+K +      + +    A+ E  +L  ++  D     C
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           +     F   + +  + + + G  L+  L ++    F    +R    +++  +  MH   
Sbjct: 257 MSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHNRF 312
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +++ DLKP NILL    +V++ D            + K  P +S                
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKPHAS---------------- 350
Query: 275 HSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
               V T  Y APEV+  G+ ++   D +S+GC+L +L  G + F+ H+ 
Sbjct: 351 ----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396

>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With 2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9- Isopropylpurine (Casp Target) Length = 310

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 92/235 (39%), Gaps = 37/235 (15%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++  K+G G FG++    +    E VAIK+   I        +E    ++L      G  
Sbjct: 3   RVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPIKSRAPQLHLEYRFYKQLGS---AGEG 58
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
             Q+  +     +  +V E LGPSL D       R+F +  V  +  QLL  + ++H   
Sbjct: 59  LPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLLSRMEYVHSKN 117
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-------- 266
           LI+ D+KPEN L+                  + G+      K   I +IDFG        
Sbjct: 118 LIYRDVKPENFLI-----------------GRQGN-----KKEHVIHIIDFGLAKEYIDP 155
Query: 267 --STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
                  +++H  +  T  Y +    LG   +   DL ++G + +    G   +Q
Sbjct: 156 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 210

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 37/221 (16%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K+L  +G+G FG V+    + +   VA+K +++ +   +A + E  V+ +L RH    + 
Sbjct: 15  KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 66
Query: 155 CVQIRNWF-DYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            VQ+     + +  + IV E +   SL D+LR         D + +    + E++ ++  
Sbjct: 67  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
              +H DL   N+L+      KV D+     +S      K LP                 
Sbjct: 127 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK--------------- 170
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                      + APE +    ++   D+WS G +L E+ S
Sbjct: 171 -----------WTAPEALREAAFSTKSDVWSFGILLWEIYS 200

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 36/230 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G G FG+V  C   +  ++ A+K +      + +    A+ E  +L  ++  D     C
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           +     F   + +  + + + G  L+  L ++    F    +R    +++  +  MH   
Sbjct: 256 MSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHNRF 311
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +++ DLKP NILL    +V++ D            + K  P +S                
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKPHAS---------------- 349
Query: 275 HSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
               V T  Y APEV+  G+ ++   D +S+GC+L +L  G + F+ H+ 
Sbjct: 350 ----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 395

>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3 Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 92  PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG 151
           P  ++  K+G G FG++    +    E VAIK+     +  ++   ++ +  R  +    
Sbjct: 30  PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-----EPMKSRAPQLHLEYRFYKQLGS 84
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
           G    Q+  +     +  +V E LGPSL D       R+F +  V  +  QL+  + ++H
Sbjct: 85  GDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVH 143
Query: 212 ELRLIHTDLKPENILL-----VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
              LI+ D+KPEN L+      + + + + D+  L++   D    K++P           
Sbjct: 144 SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFA-LAKEYIDPETKKHIP----------- 191
Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
                +++H  +  T  Y +    LG   +   DL ++G + +    G   +Q
Sbjct: 192 -----YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 239

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 36/230 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G G FG+V  C   +  ++ A+K +      + +    A+ E  +L  ++  D     C
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           +     F   + +  + + + G  L+  L ++    F    +R    +++  +  MH   
Sbjct: 257 MSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHNRF 312
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +++ DLKP NILL    +V++ D            + K  P +S                
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKPHAS---------------- 350
Query: 275 HSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
               V T  Y APEV+  G+ ++   D +S+GC+L +L  G + F+ H+ 
Sbjct: 351 ----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 36/230 (15%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G G FG+V  C   +  ++ A+K +      + +    A+ E  +L  ++  D     C
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           +     F   + +  + + + G  L+  L ++    F    +R    +++  +  MH   
Sbjct: 257 MSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHNRF 312
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +++ DLKP NILL    +V++ D            + K  P +S                
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLAC------DFSKKKPHAS---------------- 350
Query: 275 HSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
               V T  Y APEV+  G+ ++   D +S+GC+L +L  G + F+ H+ 
Sbjct: 351 ----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396

>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1 Length = 330

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 103/245 (42%), Gaps = 32/245 (13%)
Query: 80  GHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEI 139
           G  V  +G    P  ++  K+G G FG++    +    E VAIK+     +  ++   ++
Sbjct: 1   GSGVLMVG----PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-----EPMKSRAPQL 51
Query: 140 DVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
            +  R  +    G    Q+  +     +  +V E LGPSL D       R+F +  V  +
Sbjct: 52  HLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMI 110
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILL-----VSAEYVKVPDYKFLSRSSKDGSYFKNL 254
             QL+  + ++H   LI+ D+KPEN L+      + + + + D+  L++   D    K++
Sbjct: 111 AIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFG-LAKEYIDPETKKHI 169
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
           P                +++H  +  T  Y +    LG   +   DL ++G + +    G
Sbjct: 170 P----------------YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRG 213
Query: 315 EALFQ 319
              +Q
Sbjct: 214 SLPWQ 218

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 38/231 (16%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGG 152
           ++  +G G FG+V        +++ A+K++     I +   A   E   +   A      
Sbjct: 79  VVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN----S 134
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              VQ+   F    ++ +V E + G  L + +   S    P    +    +++ ++  +H
Sbjct: 135 PWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM---SNYDVPEKWAKFYTAEVVLALDAIH 191
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
            + LIH D+KP+N+LL    ++K+ D+                   + +K+ + G     
Sbjct: 192 SMGLIHRDVKPDNMLLDKHGHLKLADF------------------GTCMKMDETGMV--- 230
Query: 272 HQDHSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALF 318
           H D +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 231 HCDTA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 44/240 (18%)
Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K +S++G+G FG V  C      +    LVA+K ++ S    +     EI +L+ L    
Sbjct: 10  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 69
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPS--LYDFLRKNSYRSFPIDLVREL--GRQLLE 205
           I   R V   ++   R  + +V E L PS  L DFL+++  R   +D  R L    Q+ +
Sbjct: 70  IVKYRGV---SYGPGRPELRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 122
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
            + ++   R +H DL   NIL+ S  +VK+ D+             K LP       +D 
Sbjct: 123 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA----------KLLP-------LDK 165
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL-------CSGEALF 318
                     S +     + APE +    ++   D+WS G +L EL       CS  A F
Sbjct: 166 DXXVVREPGQSPIF----WYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF 221

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/319 (21%), Positives = 122/319 (38%), Gaps = 69/319 (21%)
Query: 78  KDGHYVFAIGENLTPRCKILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYR 132
           K GH+    GE    +  +L ++G+G+FG V E         E +  VA+K V      R
Sbjct: 2   KKGHHHHHHGEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 61
Query: 133 E--AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLR----- 184
           E    + E  V++    H +     V++           +V E +    L  +LR     
Sbjct: 62  ERIEFLNEASVMKGFTCHHV-----VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 116
Query: 185 --KNSYRSFP-IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241
              N  R  P +  + ++  ++ + +A+++  + +H DL   N ++     VK+ D+  +
Sbjct: 117 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-M 175
Query: 242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDL 301
           +R   +  Y++   K                     ++  R + APE +    +    D+
Sbjct: 176 TRDIYETDYYRKGGKG--------------------LLPVR-WMAPESLKDGVFTTSSDM 214
Query: 302 WSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 360
           WS G +L E+ S  E  +Q   N       E+VL                K+   G  LD
Sbjct: 215 WSFGVVLWEITSLAEQPYQGLSN-------EQVL----------------KFVMDGGYLD 251
Query: 361 WPDGATSR--DSMRAVWKL 377
            PD    R  D MR  W+ 
Sbjct: 252 QPDNCPERVTDLMRMCWQF 270

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 97/237 (40%), Gaps = 28/237 (11%)
Query: 99  KMGEGTFGQVVE-CFDNEKKEL-VAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           ++G G FG V +  +   KK++ VAIK+++      E A  E  + +    H +     V
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIV 73
Query: 157 QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLI 216
           ++         + ++    G  L+ FL        P+  V EL  Q+   + ++ E   +
Sbjct: 74  RLIGVCQAEALMLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYLEEKNFV 132
Query: 217 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 276
           H DL   N+LLV+  Y K+ D+        D SY+      SA K               
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY---TARSAGKW-------------- 175
Query: 277 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                  + APE I    ++   D+WS G  + E  S G+  ++  +  E +A +E+
Sbjct: 176 ----PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 228

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 93/248 (37%), Gaps = 57/248 (22%)
Query: 93  RCKILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
           R K+   +G G FGQV+E   F  +K      VA+K+++    + E  A M E+ +L  +
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLRKN-----SYRSFPID 194
             H       + + N             + + F K G +L  +LR        Y+  P D
Sbjct: 79  GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPED 130
Query: 195 LVREL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
           L ++            Q+ + + F+   + IH DL   NILL     VK+ D+       
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 190
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
           KD    +       +K                      + APE I    +    D+WS G
Sbjct: 191 KDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFG 228
Query: 306 CILVELCS 313
            +L E+ S
Sbjct: 229 VLLWEIFS 236

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 28/237 (11%)
Query: 99  KMGEGTFGQVVE-CFDNEKKEL-VAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           ++G G FG V +  +   KK++ VAIK+++      E A  E  + +    H +     V
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIV 399
Query: 157 QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLI 216
           ++         + ++    G  L+ FL        P+  V EL  Q+   + ++ E   +
Sbjct: 400 RLIGVCQAEALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 458
Query: 217 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 276
           H +L   N+LLV+  Y K+ D+        D SY+      SA K               
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT---ARSAGKW-------------- 501
Query: 277 YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
                  + APE I    ++   D+WS G  + E  S G+  ++  +  E +A +E+
Sbjct: 502 ----PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 554

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 35/246 (14%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
            L ++G G FG VV+      +  VAIK+++  +   +  + E  V+  L+       + 
Sbjct: 28  FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE-----KL 81
Query: 156 VQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           VQ+      +  I I+ E +    L ++LR+  +R F    + E+ + + E++ ++   +
Sbjct: 82  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
            +H DL   N L+     VKV D+  LSR   D     ++     ++             
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEETSSVGSKFPVR------------- 186
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL----FQTHENLEHLAMM 330
                    +  PEV++   ++   D+W+ G ++ E+ S   +    F   E  EH+A  
Sbjct: 187 ---------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
Query: 331 ERVLGP 336
            R+  P
Sbjct: 238 LRLYRP 243

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 93/248 (37%), Gaps = 57/248 (22%)
Query: 93  RCKILSKMGEGTFGQVVEC--FDNEKKEL---VAIKIVRSINKYRE--AAMIEIDVLQRL 145
           R K+   +G G FGQV+E   F  +K      VA+K+++    + E  A M E+ +L  +
Sbjct: 28  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLRKN-----SYRSFPID 194
             H       + + N             + + F K G +L  +LR        Y+  P D
Sbjct: 88  GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPED 139
Query: 195 LVREL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
           L ++            Q+ + + F+   + IH DL   NILL     VK+ D+       
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 199
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
           KD    +       +K                      + APE I    +    D+WS G
Sbjct: 200 KDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFG 237
Query: 306 CILVELCS 313
            +L E+ S
Sbjct: 238 VLLWEIFS 245

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 89/232 (38%), Gaps = 40/232 (17%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHD--- 149
           +G G FG+VVE   F   K++ V   A+K+++S      +EA M E+ ++  L +H+   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 150 ------IGGTRCVQIRNWFDYRNHICIVFEKLGPSL-YDF-LRKNSYRSFPIDLVRELGR 201
                   G   + I  +  Y + +  +  K  P L Y +    N         +     
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+ + +AF+     IH D+   N+LL +    K+ D+        D +Y         +K
Sbjct: 174 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 233
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                                 + APE I    +    D+WS G +L E+ S
Sbjct: 234 ----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 263

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
            + ++G G FG +V       K+ VAIK ++  +   +  + E +V+ +L+       + 
Sbjct: 31  FVQEIGSGQFG-LVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSH-----PKL 84
Query: 156 VQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           VQ+      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ E  
Sbjct: 85  VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC 143
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +IH DL   N L+   + +KV D+  ++R   D  Y  +      +K             
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------- 189
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325
                    + +PEV     ++   D+WS G ++ E+ S G+  ++   N E
Sbjct: 190 ---------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 232

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 85  R---EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR     +Y  +      IK                 
Sbjct: 141 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 182
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 183 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 238 RPEGCPEKVYELMRA 252

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 80  R---EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR     +Y  +      IK                 
Sbjct: 136 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 177
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 178 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 233 RPEGCPEKVYELMRA 247

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM-----IEIDVLQRLARHDIGGT 153
           ++G G FG V + +   KK +  + +    N+  + A+      E +V+Q+L    I   
Sbjct: 32  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI--V 89
Query: 154 RCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           R + I    +W      + +   +LGP L  +L++N  R      + EL  Q+   + ++
Sbjct: 90  RMIGICEAESWM-----LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYL 141
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
            E   +H DL   N+LLV+  Y K+ D+        D +Y+K                  
Sbjct: 142 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK------------------ 183
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM 329
             Q H        + APE I    ++   D+WS G ++ E  S G+  ++  +  E  AM
Sbjct: 184 -AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 240
Query: 330 MER 332
           +E+
Sbjct: 241 LEK 243

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 24  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 84  R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 139
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR     +Y  +      IK                 
Sbjct: 140 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 181
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 182 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 236
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 237 RPEGCPEKVYELMRA 251

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 85  R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR     +Y  +      IK                 
Sbjct: 141 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 182
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 183 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 238 RPEGCPEKVYELMRA 252

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 93/248 (37%), Gaps = 57/248 (22%)
Query: 93  RCKILSKMGEGTFGQVVEC--FDNEKKEL---VAIKIVRSINKYRE--AAMIEIDVLQRL 145
           R K+   +G G FGQV+E   F  +K      VA+K+++    + E  A M E+ +L  +
Sbjct: 28  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLRKN-----SYRSFPID 194
             H       + + N             + + F K G +L  +LR        Y+  P D
Sbjct: 88  GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPED 139
Query: 195 LVREL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
           L ++            Q+ + + F+   + IH DL   NILL     VK+ D+       
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 199
Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
           KD    +       +K                      + APE I    +    D+WS G
Sbjct: 200 KDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFG 237
Query: 306 CILVELCS 313
            +L E+ S
Sbjct: 238 VLLWEIFS 245

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 95/246 (38%), Gaps = 55/246 (22%)
Query: 93  RCKILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
           R K+   +G G FGQV+E   F  +K      VA+K+++    + E  A M E+ +L  +
Sbjct: 30  RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLR--KNSYRSF-PIDLV 196
             H       + + N             + + F K G +L  +LR  +N +  + P DL 
Sbjct: 90  GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKPEDLY 141
Query: 197 REL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247
           ++            Q+ + + F+   + IH DL   NILL     VK+ D+       KD
Sbjct: 142 KDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 307
               +       +K                      + APE I    +    D+WS G +
Sbjct: 202 PDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVL 239
Query: 308 LVELCS 313
           L E+ S
Sbjct: 240 LWEIFS 245

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 80  R---EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR     +Y  +      IK                 
Sbjct: 136 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 177
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 178 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 233 RPEGCPEKVYELMRA 247

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 85  R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR                   +  G T   H    + 
Sbjct: 141 DLAARNCLVGENHLVKVADFG-LSR-------------------LMTGDTXTAHAGAKFP 180
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
           +    + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 181 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 238 RPEGCPEKVYELMRA 252

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/229 (20%), Positives = 97/229 (42%), Gaps = 36/229 (15%)
Query: 100 MGEGTFGQVVECFDNE---KKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDIGGTR 154
           +GEG++G+V E  D+E   ++ +  +K  +        A +  EI +L+RL   ++    
Sbjct: 13  LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV---- 68
Query: 155 CVQIRN--WFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +Q+ +  + + +  + +V E     + + L     + FP+        QL++ + ++H 
Sbjct: 69  -IQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS 127
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
             ++H D+KP N+LL +   +K+                  L  + A+       T    
Sbjct: 128 QGIVHKDIKPGNLLLTTGGTLKI----------------SALGVAEALHPFAADDTCRTS 171
Query: 273 QDHSYVVSTRHYRAPEVILGLGW--NYPCDLWSVGCILVELCSGEALFQ 319
           Q       +  ++ PE+  GL     +  D+WS G  L  + +G   F+
Sbjct: 172 Q------GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 93/246 (37%), Gaps = 53/246 (21%)
Query: 93  RCKILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
           R K+   +G G FGQV+E   F  +K      VA+K+++    + E  A M E+ +L  +
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 146 ARH----DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKN-----SYRSFPIDLV 196
             H    ++ G  C +           C    K G +L  +LR        Y+  P DL 
Sbjct: 79  GHHLNVVNLLGA-CTKPGGPLMVITEFC----KFG-NLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 197 REL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247
           ++            Q+ + + F+   + IH DL   NILL     VK+ D+       KD
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Query: 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI 307
               +       +K                      + APE I    +    D+WS G +
Sbjct: 193 PDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVL 230
Query: 308 LVELCS 313
           L E+ S
Sbjct: 231 LWEIFS 236

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM-----IEIDVLQRLARHDIGGT 153
           ++G G FG V + +   KK +  + +    N+  + A+      E +V+Q+L    I   
Sbjct: 34  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI--V 91
Query: 154 RCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           R + I    +W      + +   +LGP L  +L++N  R      + EL  Q+   + ++
Sbjct: 92  RMIGICEAESWM-----LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYL 143
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
            E   +H DL   N+LLV+  Y K+ D+        D +Y+K                  
Sbjct: 144 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK------------------ 185
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM 329
             Q H        + APE I    ++   D+WS G ++ E  S G+  ++  +  E  AM
Sbjct: 186 -AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 242
Query: 330 MER 332
           +E+
Sbjct: 243 LEK 245

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM-----IEIDVLQRLARHDIGGT 153
           ++G G FG V + +   KK +  + +    N+  + A+      E +V+Q+L    I   
Sbjct: 34  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI--V 91
Query: 154 RCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           R + I    +W      + +   +LGP L  +L++N  R      + EL  Q+   + ++
Sbjct: 92  RMIGICEAESWM-----LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYL 143
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
            E   +H DL   N+LLV+  Y K+ D+        D +Y+K                  
Sbjct: 144 EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK------------------ 185
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM 329
             Q H        + APE I    ++   D+WS G ++ E  S G+  ++  +  E  AM
Sbjct: 186 -AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 242
Query: 330 MER 332
           +E+
Sbjct: 243 LEK 245

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 80  R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR     +Y  +      IK                 
Sbjct: 136 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 177
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 178 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 233 RPEGCPEKVYELMRA 247

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 35/205 (17%)
Query: 132 REAAMIEIDVLQRLARHDIGGTRCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSY 188
           ++  + E +V+Q+L    I   R + I    +W      + +   +LGP L  +L++N  
Sbjct: 56  KDELLAEANVMQQLDNPYI--VRMIGICEAESWM-----LVMEMAELGP-LNKYLQQN-- 105
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
           R      + EL  Q+   + ++ E   +H DL   N+LLV+  Y K+ D+        D 
Sbjct: 106 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 308
           +Y+K                    Q H        + APE I    ++   D+WS G ++
Sbjct: 166 NYYK-------------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLM 204
Query: 309 VELCS-GEALFQTHENLEHLAMMER 332
            E  S G+  ++  +  E  AM+E+
Sbjct: 205 WEAFSYGQKPYRGMKGSEVTAMLEK 229

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 37/221 (16%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K+L  +G+G FG V+    + +   VA+K +++ +   +A + E  V+ +L RH    + 
Sbjct: 24  KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 75
Query: 155 CVQIRNWF-DYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            VQ+     + +  + IV E +   SL D+LR         D + +    + E++ ++  
Sbjct: 76  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
              +H DL   N+L+      KV D+     +S      K LP                 
Sbjct: 136 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK--------------- 179
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                      + APE +    ++   D+WS G +L E+ S
Sbjct: 180 -----------WTAPEALREKKFSTKSDVWSFGILLWEIYS 209

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 85  R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR     +Y  +      IK                 
Sbjct: 141 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 182
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 183 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 238 RPEGCPEKVYELMRA 252

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 100/244 (40%), Gaps = 34/244 (13%)
Query: 95  KILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
           KI   +G G FG+V         +++  VAIK +++   +K R   + E  ++ +    +
Sbjct: 32  KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 91
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     + +         + I+ E +   SL  FLRKN  R   I LV  L R +   + 
Sbjct: 92  I-----IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RGIGSGMK 145
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++ ++  +H DL   NIL+ S    KV D+  +SR  +D        +   I +      
Sbjct: 146 YLSDMSAVHRDLAARNILVNSNLVCKVSDFG-MSRVLEDDPEAAYTTRGGKIPI------ 198
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL 327
                          + APE I    +    D+WS G ++ E+ S GE  +    N + +
Sbjct: 199 --------------RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 244
Query: 328 AMME 331
             +E
Sbjct: 245 KAIE 248

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 80  R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR     +Y  +      IK                 
Sbjct: 136 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 177
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 178 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 233 RPEGCPEKVYELMRA 247

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 35/205 (17%)
Query: 132 REAAMIEIDVLQRLARHDIGGTRCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSY 188
           ++  + E +V+Q+L    I   R + I    +W      + +   +LGP L  +L++N  
Sbjct: 62  KDELLAEANVMQQLDNPYI--VRMIGICEAESWM-----LVMEMAELGP-LNKYLQQN-- 111
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
           R      + EL  Q+   + ++ E   +H DL   N+LLV+  Y K+ D+        D 
Sbjct: 112 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 308
           +Y+K                    Q H        + APE I    ++   D+WS G ++
Sbjct: 172 NYYK-------------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLM 210
Query: 309 VELCS-GEALFQTHENLEHLAMMER 332
            E  S G+  ++  +  E  AM+E+
Sbjct: 211 WEAFSYGQKPYRGMKGSEVTAMLEK 235

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 22  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 82  R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR     +Y  +      IK                 
Sbjct: 138 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 179
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 180 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 234
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 235 RPEGCPEKVYELMRA 249

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 91/244 (37%), Gaps = 53/244 (21%)
Query: 93  RCKILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
           R  +   +G G FGQV+E   F  +K      VA+K+++    + E  A M E+ +L  +
Sbjct: 28  RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLRKNSYRSFPI-DLVRE 198
             H       + + N             + + F K G +L  +LR       P  DL ++
Sbjct: 88  GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKDLYKD 139
Query: 199 L---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249
                       Q+ + + F+   + IH DL   NILL     VK+ D+       KD  
Sbjct: 140 FLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 199
Query: 250 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 309
           Y +       +K                      + APE I    +    D+WS G +L 
Sbjct: 200 YVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLW 237
Query: 310 ELCS 313
           E+ S
Sbjct: 238 EIFS 241

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 22  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 82  R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR     +Y  +      IK                 
Sbjct: 138 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 179
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 180 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 234
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 235 RPEGCPEKVYELMRA 249

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 35/205 (17%)
Query: 132 REAAMIEIDVLQRLARHDIGGTRCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSY 188
           ++  + E +V+Q+L    I   R + I    +W      + +   +LGP L  +L++N  
Sbjct: 50  KDELLAEANVMQQLDNPYI--VRMIGICEAESWM-----LVMEMAELGP-LNKYLQQN-- 99
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
           R      + EL  Q+   + ++ E   +H DL   N+LLV+  Y K+ D+        D 
Sbjct: 100 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 159
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 308
           +Y+K                    Q H        + APE I    ++   D+WS G ++
Sbjct: 160 NYYK-------------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLM 198
Query: 309 VELCS-GEALFQTHENLEHLAMMER 332
            E  S G+  ++  +  E  AM+E+
Sbjct: 199 WEAFSYGQKPYRGMKGSEVTAMLEK 223

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 38/248 (15%)
Query: 95  KILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
           KI   +G G FG+V         +K+  VAIK ++     + R   + E  ++ +    +
Sbjct: 19  KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 78
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     +++         + I+ E +   +L  FLR N  +   I LV  L R +   + 
Sbjct: 79  I-----IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML-RGIASGMR 132
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY---KFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           ++ E+  +H DL   NIL+ S    KV D+   +FL  +S D +   +L     I+    
Sbjct: 133 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIR---- 188
Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL 324
                             + APE I    +    D WS G ++ E+ S GE  +    N 
Sbjct: 189 ------------------WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ 230
Query: 325 EHLAMMER 332
           + +  +E+
Sbjct: 231 DVINAIEQ 238

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 35/205 (17%)
Query: 132 REAAMIEIDVLQRLARHDIGGTRCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSY 188
           ++  + E +V+Q+L    I   R + I    +W      + +   +LGP L  +L++N  
Sbjct: 52  KDELLAEANVMQQLDNPYI--VRMIGICEAESWM-----LVMEMAELGP-LNKYLQQN-- 101
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
           R      + EL  Q+   + ++ E   +H DL   N+LLV+  Y K+ D+        D 
Sbjct: 102 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 161
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 308
           +Y+K                    Q H        + APE I    ++   D+WS G ++
Sbjct: 162 NYYK-------------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLM 200
Query: 309 VELCS-GEALFQTHENLEHLAMMER 332
            E  S G+  ++  +  E  AM+E+
Sbjct: 201 WEAFSYGQKPYRGMKGSEVTAMLEK 225

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 43/227 (18%)
Query: 98  SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEI---DVLQRLARHDIGGTR 154
           +KMGEG FG V + + N     VA+K        + AAM++I   ++ Q+  +      +
Sbjct: 31  NKMGEGGFGVVYKGYVNNTT--VAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 80
Query: 155 C-----VQIRNWFDYRNHICIVFEKL-GPSLYDFLR-KNSYRSFPIDLVRELGRQLLESV 207
           C     V++  +    + +C+V+  +   SL D L   +        +  ++ +     +
Sbjct: 81  CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 140
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
            F+HE   IH D+K  NILL  A   K+ D+     S K                  F  
Sbjct: 141 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FAQ 182
Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
                +    +V T  Y APE + G       D++S G +L+E+ +G
Sbjct: 183 XVMXXR----IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 224

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 100/244 (40%), Gaps = 34/244 (13%)
Query: 95  KILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
           KI   +G G FG+V         +++  VAIK +++   +K R   + E  ++ +    +
Sbjct: 11  KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 70
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     + +         + I+ E +   SL  FLRKN  R   I LV  L R +   + 
Sbjct: 71  I-----IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RGIGSGMK 124
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++ ++  +H DL   NIL+ S    KV D+  +SR  +D        +   I +      
Sbjct: 125 YLSDMSYVHRDLAARNILVNSNLVCKVSDFG-MSRVLEDDPEAAYTTRGGKIPI------ 177
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL 327
                          + APE I    +    D+WS G ++ E+ S GE  +    N + +
Sbjct: 178 --------------RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 223
Query: 328 AMME 331
             +E
Sbjct: 224 KAIE 227

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 37/221 (16%)
Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K+L  +G+G FG V+    + +   VA+K +++ +   +A + E  V+ +L RH    + 
Sbjct: 9   KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 60
Query: 155 CVQIRNWF-DYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            VQ+     + +  + IV E +   SL D+LR         D + +    + E++ ++  
Sbjct: 61  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
              +H DL   N+L+      KV D+     +S      K LP                 
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK--------------- 164
Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                      + APE +    ++   D+WS G +L E+ S
Sbjct: 165 -----------WTAPEALREKKFSTKSDVWSFGILLWEIYS 194

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 33  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 93  R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 148
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR     +Y  +      IK                 
Sbjct: 149 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 190
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 191 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 245
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 246 RPEGCPEKVYELMRA 260

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 100/244 (40%), Gaps = 34/244 (13%)
Query: 95  KILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
           KI   +G G FG+V         +++  VAIK +++   +K R   + E  ++ +    +
Sbjct: 17  KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 76
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     + +         + I+ E +   SL  FLRKN  R   I LV  L R +   + 
Sbjct: 77  I-----IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RGIGSGMK 130
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++ ++  +H DL   NIL+ S    KV D+  +SR  +D        +   I +      
Sbjct: 131 YLSDMSYVHRDLAARNILVNSNLVCKVSDFG-MSRVLEDDPEAAYTTRGGKIPI------ 183
Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL 327
                          + APE I    +    D+WS G ++ E+ S GE  +    N + +
Sbjct: 184 --------------RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 229
Query: 328 AMME 331
             +E
Sbjct: 230 KAIE 233

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/223 (20%), Positives = 98/223 (43%), Gaps = 34/223 (15%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           + ++G G +G V +       +++A+K +R+    +E   + +D+   ++   +     V
Sbjct: 12  IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDL--DISMRTVDCPFTV 69
Query: 157 QIRNWFDYRNHICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMH-EL 213
                      + I  E +  SL  F ++  +  ++ P D++ ++   +++++  +H +L
Sbjct: 70  TFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
            +IH D+KP N+L+ +   VK+ D+         G    ++ K      ID G       
Sbjct: 130 SVIHRDVKPSNVLINALGQVKMCDFGI------SGYLVDDVAKD-----IDAG------- 171
Query: 274 DHSYVVSTRHYRAPEVI----LGLGWNYPCDLWSVGCILVELC 312
                   + Y APE I       G++   D+WS+G  ++EL 
Sbjct: 172 -------CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 207

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 18  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I I F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 78  R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR                   +  G T   H    + 
Sbjct: 134 DLAARNCLVGENHLVKVADFG-LSR-------------------LMTGDTXTAHAGAKFP 173
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
           +    + APE +    ++   D+W+ G +L E+ +       G    Q +E LE    ME
Sbjct: 174 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME 230
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 231 RPEGCPEKVYELMRA 245

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 34/244 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 287 R---EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 342
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           +L   N L+     VKV D+  LSR     +Y  +      IK                 
Sbjct: 343 NLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 384
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 385 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 439
Query: 332 RVLG 335
           R  G
Sbjct: 440 RPEG 443

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 34/244 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R    Y   I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 326 REPPFY---IITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 381
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           +L   N L+     VKV D+  LSR     +Y  +      IK                 
Sbjct: 382 NLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAHAGAKFPIK----------------- 423
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 424 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 478
Query: 332 RVLG 335
           R  G
Sbjct: 479 RPEG 482

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 21  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 81  R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR     +Y         IK                 
Sbjct: 137 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAPAGAKFPIK----------------- 178
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 179 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 233
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 234 RPEGCPEKVYELMRA 248

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 22  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 82  R---EPPFYIITEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR     +Y         IK                 
Sbjct: 138 DLAARNCLVGENHLVKVADFG-LSRLMTGDTYTAPAGAKFPIK----------------- 179
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
                + APE +    ++   D+W+ G +L E+ +       G  L Q +E LE    ME
Sbjct: 180 -----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 234
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 235 RPEGCPEKVYELMRA 249

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 98/232 (42%), Gaps = 32/232 (13%)
Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
            + ++G G FG +V       K+ VAIK +R      E  + E +V+ +L+       + 
Sbjct: 12  FVQEIGSGQFG-LVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH-----PKL 65
Query: 156 VQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           VQ+      +  IC+V E +    L D+LR      F  + +  +   + E +A++ E  
Sbjct: 66  VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +IH DL   N L+   + +KV D+  ++R   D  Y  +      +K             
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFG-MTRFVLDDQYTSSTGTKFPVK------------- 170
Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325
                    + +PEV     ++   D+WS G ++ E+ S G+  ++   N E
Sbjct: 171 ---------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 213

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G FG+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 18  KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 78  R---EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR                   +  G T   H    + 
Sbjct: 134 DLAARNCLVGENHLVKVADFG-LSR-------------------LMTGDTXTAHAGAKFP 173
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
           +    + APE +    ++   D+W+ G +L E+ +       G    Q +E LE    ME
Sbjct: 174 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME 230
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 231 RPEGCPEKVYELMRA 245

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 117/304 (38%), Gaps = 69/304 (22%)
Query: 93  RCKILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
           +  +L ++G+G+FG V E         E +  VA+K V      RE    + E  V++  
Sbjct: 18  KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLR-------KNSYRSFP-IDLV 196
             H +     V++           +V E +    L  +LR        N  R  P +  +
Sbjct: 78  TCHHV-----VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
            ++  ++ + +A+++  + +H DL   N ++     VK+ D+  ++R   + +Y++   K
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-MTRDIYETAYYRKGGK 191
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE 315
                                ++  R + APE +    +    D+WS G +L E+ S  E
Sbjct: 192 G--------------------LLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRA 373
             +Q   N       E+VL                K+   G  LD PD    R  D MR 
Sbjct: 231 QPYQGLSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRM 267
Query: 374 VWKL 377
            W+ 
Sbjct: 268 CWQF 271

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 95/230 (41%), Gaps = 46/230 (20%)
Query: 95  KILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           ++L K+G+G+FG V    +D    + V++ +            ++ DVL +    D    
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 69
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP------------SLYDFLRKNSYRSFPIDLVRELGR 201
           R V   +  D+RN I +    L P            SL D LRK+    F +  +     
Sbjct: 70  REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 128
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+ E + ++   R IH DL   N+LL + + VK+ D+  +          + LP++    
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQNDDHX 178
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
           ++         Q+H  V     + APE +    +++  D W  G  L E+
Sbjct: 179 VM---------QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 217

>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 18/141 (12%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L K+G G FG V +C       + AIK  RS  K    ++ E + L+ +  H + G    
Sbjct: 16  LEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAVLGQHSH 72
Query: 157 QIRNWFDYR--NHICIVFEKL-GPSLYDFLRKNSYRSFPI-------DLVRELGRQLLES 206
            +R +  +   +H+ I  E   G SL D + +N YR           DL+ ++GR L   
Sbjct: 73  VVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLLQVGRGL--- 128
Query: 207 VAFMHELRLIHTDLKPENILL 227
             ++H + L+H D+KP NI +
Sbjct: 129 -RYIHSMSLVHMDIKPSNIFI 148

>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 18/141 (12%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L K+G G FG V +C       + AIK  RS  K    ++ E + L+ +  H + G    
Sbjct: 14  LEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAVLGQHSH 70
Query: 157 QIRNWFDYR--NHICIVFEKL-GPSLYDFLRKNSYRSFPI-------DLVRELGRQLLES 206
            +R +  +   +H+ I  E   G SL D + +N YR           DL+ ++GR L   
Sbjct: 71  VVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLLQVGRGL--- 126
Query: 207 VAFMHELRLIHTDLKPENILL 227
             ++H + L+H D+KP NI +
Sbjct: 127 -RYIHSMSLVHMDIKPSNIFI 146

>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 18/141 (12%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L K+G G FG V +C       + AIK  RS  K    ++ E + L+ +  H + G    
Sbjct: 14  LEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAVLGQHSH 70
Query: 157 QIRNWFDYR--NHICIVFEKL-GPSLYDFLRKNSYRSFPI-------DLVRELGRQLLES 206
            +R +  +   +H+ I  E   G SL D + +N YR           DL+ ++GR L   
Sbjct: 71  VVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLLQVGRGL--- 126
Query: 207 VAFMHELRLIHTDLKPENILL 227
             ++H + L+H D+KP NI +
Sbjct: 127 -RYIHSMSLVHMDIKPSNIFI 146

>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 38/162 (23%)
Query: 156 VQIRNWFDYRNHIC-----IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           VQI N+ ++ +        IV E +G      L+++  +  P+        ++L +++++
Sbjct: 142 VQIFNFVEHTDRHGDPVGYIVMEYVGGQ---SLKRSKGQKLPVAEAIAYLLEILPALSYL 198
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H + L++ DLKPENI+L   +                            +KLID G+ + 
Sbjct: 199 HSIGLVYNDLKPENIMLTEEQ----------------------------LKLIDLGAVS- 229
Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 312
                 Y+  T  ++APE++   G     D+++VG  L  L 
Sbjct: 230 RINSFGYLYGTPGFQAPEIVR-TGPTVATDIYTVGRTLAALT 270

>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 18/141 (12%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L K+G G FG V +C       + AIK  RS  K    ++ E + L+ +  H + G    
Sbjct: 12  LEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAVLGQHSH 68
Query: 157 QIRNWFDYR--NHICIVFEKL-GPSLYDFLRKNSYRSFPI-------DLVRELGRQLLES 206
            +R +  +   +H+ I  E   G SL D + +N YR           DL+ ++GR L   
Sbjct: 69  VVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLLQVGRGL--- 124
Query: 207 VAFMHELRLIHTDLKPENILL 227
             ++H + L+H D+KP NI +
Sbjct: 125 -RYIHSMSLVHMDIKPSNIFI 144

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/362 (21%), Positives = 135/362 (37%), Gaps = 85/362 (23%)
Query: 69  GSPPWRPDDKDGHY-VFAIGE-NLTPRCKILSKMGEGTFGQVV--ECFDNEKKELVAIKI 124
            SP    DD D    V  +G+ +  P+      +G G  G +V    FDN     VA+K 
Sbjct: 3   SSPSLEQDDGDEETSVVIVGKISFCPK----DVLGHGAEGTIVYRGMFDNRD---VAVK- 54
Query: 125 VRSINKYREAAMIEIDVLQRLARH-DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFL 183
            R + +    A  E+ +L+    H ++    C +    F Y     I  E    +L +++
Sbjct: 55  -RILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQY-----IAIELCAATLQEYV 108
Query: 184 RKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243
            +  +    ++ +  L +Q    +A +H L ++H DLKP NIL              +S 
Sbjct: 109 EQKDFAHLGLEPITLL-QQTTSGLAHLHSLNIVHRDLKPHNIL--------------ISM 153
Query: 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI---LGLGWNYPCD 300
            +  G     +      K +  G  +F  +  S V  T  + APE++         Y  D
Sbjct: 154 PNAHGKIKAMISDFGLCKKLAVGRHSFSRR--SGVPGTEGWIAPEMLSEDCKENPTYTVD 211
Query: 301 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 360
           ++S GC+                               ++++        K  +R A + 
Sbjct: 212 IFSAGCVF------------------------------YYVISEGSHPFGKSLQRQANIL 241
Query: 361 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 420
              GA S D +              +H D  A +LI   + ++  DP +R  A+  L+HP
Sbjct: 242 L--GACSLDCLHP-----------EKHEDVIARELI---EKMIAMDPQKRPSAKHVLKHP 285
Query: 421 FF 422
           FF
Sbjct: 286 FF 287

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 46/230 (20%)
Query: 95  KILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           ++L K+G+G+FG V    +D    + V++ +            ++ DVL +    D    
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 69
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP------------SLYDFLRKNSYRSFPIDLVRELGR 201
           R V   +  D+RN I +    L P            SL D LRK+    F +  +     
Sbjct: 70  REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 128
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+ E + ++   R IH DL   N+LL + + VK+ D+  +          + LP++    
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 174
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                   +  Q+H  V     + APE +    +++  D W  G  L E+
Sbjct: 175 -----DDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 217

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 46/230 (20%)
Query: 95  KILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           ++L K+G+G+FG V    +D    + V++ +            ++ DVL +    D    
Sbjct: 11  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 59
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP------------SLYDFLRKNSYRSFPIDLVRELGR 201
           R V   +  D+RN I +    L P            SL D LRK+    F +  +     
Sbjct: 60  REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 118
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+ E + ++   R IH DL   N+LL + + VK+ D+  +          + LP++    
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 164
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
             D      EH+   +      + APE +    +++  D W  G  L E+
Sbjct: 165 --DDHXVMQEHRKVPFA-----WCAPESLKTRTFSHASDTWMFGVTLWEM 207

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 46/230 (20%)
Query: 95  KILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           ++L K+G+G+FG V    +D    + V++ +            ++ DVL +    D    
Sbjct: 15  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 63
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP------------SLYDFLRKNSYRSFPIDLVRELGR 201
           R V   +  D+RN I +    L P            SL D LRK+    F +  +     
Sbjct: 64  REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 122
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+ E + ++   R IH DL   N+LL + + VK+ D+  +          + LP++    
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 168
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                   +  Q+H  V     + APE +    +++  D W  G  L E+
Sbjct: 169 -----DDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 211

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 116/304 (38%), Gaps = 69/304 (22%)
Query: 93  RCKILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
           +  +L ++G+G+FG V E         E +  VA+K V      RE    + E  V++  
Sbjct: 18  KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLR-------KNSYRSFP-IDLV 196
             H +     V++           +V E +    L  +LR        N  R  P +  +
Sbjct: 78  TCHHV-----VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
            ++  ++ + +A+++  + +H DL   N ++     VK+ D+  ++R   +  Y++   K
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-MTRDIYETDYYRKGGK 191
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE 315
                                ++  R + APE +    +    D+WS G +L E+ S  E
Sbjct: 192 G--------------------LLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRA 373
             +Q   N       E+VL                K+   G  LD PD    R  D MR 
Sbjct: 231 QPYQGLSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRM 267
Query: 374 VWKL 377
            W+ 
Sbjct: 268 CWQF 271

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 46/230 (20%)
Query: 95  KILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           ++L K+G+G+FG V    +D    + V++ +            ++ DVL +    D    
Sbjct: 11  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 59
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP------------SLYDFLRKNSYRSFPIDLVRELGR 201
           R V   +  D+RN I +    L P            SL D LRK+    F +  +     
Sbjct: 60  REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 118
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+ E + ++   R IH DL   N+LL + + VK+ D+  +          + LP++    
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 164
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                   +  Q+H  V     + APE +    +++  D W  G  L E+
Sbjct: 165 -----DDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 207

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 46/230 (20%)
Query: 95  KILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           ++L K+G+G+FG V    +D    + V++ +            ++ DVL +    D    
Sbjct: 15  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 63
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP------------SLYDFLRKNSYRSFPIDLVRELGR 201
           R V   +  D+RN I +    L P            SL D LRK+    F +  +     
Sbjct: 64  REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 122
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+ E + ++   R IH DL   N+LL + + VK+ D+  +          + LP++    
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 168
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                   +  Q+H  V     + APE +    +++  D W  G  L E+
Sbjct: 169 -----DDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 211

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 46/230 (20%)
Query: 95  KILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           ++L K+G+G+FG V    +D    + V++ +            ++ DVL +    D    
Sbjct: 11  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 59
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP------------SLYDFLRKNSYRSFPIDLVRELGR 201
           R V   +  D+RN I +    L P            SL D LRK+    F +  +     
Sbjct: 60  REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 118
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+ E + ++   R IH DL   N+LL + + VK+ D+  +          + LP++    
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM----------RALPQN---- 164
Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
                   +  Q+H  V     + APE +    +++  D W  G  L E+
Sbjct: 165 -----DDHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 207

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
           +G G FG+V        ++K+  VAIK ++     K R   + E  ++ +    +I    
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 108
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            +++         + IV E +   SL  FLRK+  +   I LV  L R +   + ++ ++
Sbjct: 109 -IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 166
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             +H DL   NIL+ S    KV D+  LSR  +D        +   I +           
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 214
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                     + +PE I    +    D+WS G +L E+ S
Sbjct: 215 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
           +G G FG+V        ++K+  VAIK ++     K R   + E  ++ +    +I    
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 108
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            +++         + IV E +   SL  FLRK+  +   I LV  L R +   + ++ ++
Sbjct: 109 -IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 166
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             +H DL   NIL+ S    KV D+  LSR  +D        +   I +           
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 214
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                     + +PE I    +    D+WS G +L E+ S
Sbjct: 215 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 94/247 (38%), Gaps = 56/247 (22%)
Query: 93  RCKILSKMGEGTFGQVVEC--FDNEKK---ELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
           R  +   +G G FGQV+E   F  +K      VA+K+++    + E  A M E+ +L  +
Sbjct: 29  RLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 88
Query: 146 ARHDIGGTRCVQIRNWFDYRNH------ICIVFEKLGPSLYDFLR--KNSYRSF--PIDL 195
             H       + + N             + + F K G +L  +LR  +N +  +  P DL
Sbjct: 89  GHH-------LNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKTPEDL 140
Query: 196 VREL---------GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246
            ++            Q+ + + F+   + IH DL   NILL     VK+ D+       K
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
Query: 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 306
           D    +       +K                      + APE I    +    D+WS G 
Sbjct: 201 DPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGV 238
Query: 307 ILVELCS 313
           +L E+ S
Sbjct: 239 LLWEIFS 245

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 23/119 (19%)
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
           RQ+  ++   H     H D+KPENIL+ + ++  + D+   S ++ +             
Sbjct: 141 RQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDE------------- 187
Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
           KL   G+T          V T +Y APE        Y  D++++ C+L E  +G   +Q
Sbjct: 188 KLTQLGNT----------VGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQ 236

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
           +G G FG+V        ++K+  VAIK ++     K R   + E  ++ +    +I    
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 108
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            +++         + IV E +   SL  FLRK+  +   I LV  L R +   + ++ ++
Sbjct: 109 -IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 166
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             +H DL   NIL+ S    KV D+  LSR  +D        +   I +           
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 214
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                     + +PE I    +    D+WS G +L E+ S
Sbjct: 215 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/231 (21%), Positives = 98/231 (42%), Gaps = 32/231 (13%)
Query: 95  KILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR-LARHDI 150
           ++L  +G G +G+V    +   ++  +L A+K+++     ++A   E    +R +  H  
Sbjct: 57  ELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR 116
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                V +   F     + ++ + + G  L+  L +     F    V+    +++ ++  
Sbjct: 117 QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEH 174
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H+L +I+ D+K ENILL S  +V + D+             K        +  DF  T 
Sbjct: 175 LHKLGIIYRDIKLENILLDSNGHVVLTDF----------GLSKEFVADETERAYDFCGTI 224
Query: 270 FEHQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALF 318
                         Y AP+++ G   G +   D WS+G ++ EL +G + F
Sbjct: 225 -------------EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
           +G G FG+V        ++K+  VAIK ++     K R   + E  ++ +    +I    
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 108
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            +++         + IV E +   SL  FLRK+  +   I LV  L R +   + ++ ++
Sbjct: 109 -IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 166
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             +H DL   NIL+ S    KV D+  LSR  +D        +   I +           
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 214
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                     + +PE I    +    D+WS G +L E+ S
Sbjct: 215 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
           +G G FG+V        ++K+  VAIK ++     K R   + E  ++ +    +I    
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 108
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            +++         + IV E +   SL  FLRK+  +   I LV  L R +   + ++ ++
Sbjct: 109 -IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 166
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             +H DL   NIL+ S    KV D+  LSR  +D        +   I +           
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 214
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                     + +PE I    +    D+WS G +L E+ S
Sbjct: 215 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
           +G G FG+V        ++K+  VAIK ++     K R   + E  ++ +    +I    
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 108
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            +++         + IV E +   SL  FLRK+  +   I LV  L R +   + ++ ++
Sbjct: 109 -IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 166
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             +H DL   NIL+ S    KV D+  LSR  +D        +   I +           
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 214
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                     + +PE I    +    D+WS G +L E+ S
Sbjct: 215 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 35/239 (14%)
Query: 83  VFAIGENLTPRCKILSK-MGEGTFGQVVECF---DNEKKEL-VAIKIVRS--INKYREAA 135
           V      + P C    K +G G FG+V +      + KKE+ VAIK +++    K R   
Sbjct: 34  VLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDF 93
Query: 136 MIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYD-FLRKNSYRSFPID 194
           + E  ++ + + H+I     +++         + I+ E +     D FLR+       + 
Sbjct: 94  LGEAGIMGQFSHHNI-----IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQ 148
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
           LV  L R +   + ++  +  +H DL   NIL+ S    KV D+  LSR  +D       
Sbjct: 149 LVGML-RGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFG-LSRVLEDDPEATYT 206
Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                I +                     + APE I    +    D+WS G ++ E+ +
Sbjct: 207 TSGGKIPI--------------------RWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 35/205 (17%)
Query: 132 REAAMIEIDVLQRLARHDIGGTRCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSY 188
           ++  + E +V+Q+L    I   R + I    +W      + +   +LGP L  +L++N  
Sbjct: 56  KDELLAEANVMQQLDNPYI--VRMIGICEAESWM-----LVMEMAELGP-LNKYLQQN-- 105
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
           R      + EL  Q+   + ++ E   +H DL   N+LLV+  Y K+ D+        D 
Sbjct: 106 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
Query: 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 308
           + +K                    Q H        + APE I    ++   D+WS G ++
Sbjct: 166 NXYK-------------------AQTHG--KWPVKWYAPECINYYKFSSKSDVWSFGVLM 204
Query: 309 VELCS-GEALFQTHENLEHLAMMER 332
            E  S G+  ++  +  E  AM+E+
Sbjct: 205 WEAFSYGQKPYRGMKGSEVTAMLEK 229

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
           +G G FG+V        ++K+  VAIK ++     K R   + E  ++ +    +I    
Sbjct: 53  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 108
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            +++         + IV E +   SL  FLRK+  +   I LV  L R +   + ++ ++
Sbjct: 109 -IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 166
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             +H DL   NIL+ S    KV D+  LSR  +D        +   I +           
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 214
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                     + +PE I    +    D+WS G +L E+ S
Sbjct: 215 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
           +G G FG+V        ++K+  VAIK ++     K R   + E  ++ +    +I    
Sbjct: 24  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 79
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            +++         + IV E +   SL  FLRK+  +   I LV  L R +   + ++ ++
Sbjct: 80  -IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 137
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             +H DL   NIL+ S    KV D+  LSR  +D        +   I +           
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 185
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                     + +PE I    +    D+WS G +L E+ S
Sbjct: 186 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
           +G G FG+V        ++K+  VAIK ++     K R   + E  ++ +    +I    
Sbjct: 51  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 106
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            +++         + IV E +   SL  FLRK+  +   I LV  L R +   + ++ ++
Sbjct: 107 -IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 164
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             +H DL   NIL+ S    KV D+  LSR  +D        +   I +           
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 212
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                     + +PE I    +    D+WS G +L E+ S
Sbjct: 213 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 64/304 (21%), Positives = 116/304 (38%), Gaps = 69/304 (22%)
Query: 93  RCKILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
           +  +L ++G+G+FG V E         E +  VA+K V      RE    + E  V++  
Sbjct: 19  KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 78
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLR-------KNSYRSFP-IDLV 196
             H +     V++           +V E +    L  +LR        N  R  P +  +
Sbjct: 79  TCHHV-----VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 133
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
            ++  ++ + +A+++  + +H +L   N ++     VK+ D+  ++R   +  Y++   K
Sbjct: 134 IQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFG-MTRDIYETDYYRKGGK 192
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE 315
                                ++  R + APE +    +    D+WS G +L E+ S  E
Sbjct: 193 G--------------------LLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 231
Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRA 373
             +Q   N       E+VL                K+   G  LD PD    R  D MR 
Sbjct: 232 QPYQGLSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRM 268
Query: 374 VWKL 377
            W+ 
Sbjct: 269 CWQF 272

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 35/255 (13%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++     V  
Sbjct: 18  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           R   +   +I   F   G +L D+LR+ + +     ++  +  Q+  ++ ++ +   IH 
Sbjct: 78  R---EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV 278
           DL   N L+     VKV D+  LSR                   +  G T   H    + 
Sbjct: 134 DLAARNCLVGENHLVKVADFG-LSR-------------------LMTGDTFTAHAGAKFP 173
Query: 279 VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-------GEALFQTHENLEHLAMME 331
           +    + APE +    ++   D+W+ G +L E+ +       G    Q +E LE    ME
Sbjct: 174 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME 230
Query: 332 RVLG-PLPHHMVIRA 345
           R  G P   + ++RA
Sbjct: 231 RPEGCPEKVYELMRA 245

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 100 MGEGTFGQVVEC---FDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTR 154
           +G G FG+V        ++K+  VAIK ++     K R   + E  ++ +    +I    
Sbjct: 41  VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI---- 96
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            +++         + IV E +   SL  FLRK+  +   I LV  L R +   + ++ ++
Sbjct: 97  -IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDM 154
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             +H DL   NIL+ S    KV D+  LSR  +D        +   I +           
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFG-LSRVLEDDPEAAYTTRGGKIPI----------- 202
Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                     + +PE I    +    D+WS G +L E+ S
Sbjct: 203 ---------RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 64/304 (21%), Positives = 116/304 (38%), Gaps = 69/304 (22%)
Query: 93  RCKILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
           +  +L ++G+G+FG V E         E +  VA+K V      RE    + E  V++  
Sbjct: 18  KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLR-------KNSYRSFP-IDLV 196
             H +     V++           +V E +    L  +LR        N  R  P +  +
Sbjct: 78  TCHHV-----VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
            ++  ++ + +A+++  + +H +L   N ++     VK+ D+  ++R   +  Y++   K
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFG-MTRDIYETDYYRKGGK 191
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE 315
                                ++  R + APE +    +    D+WS G +L E+ S  E
Sbjct: 192 G--------------------LLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRA 373
             +Q   N       E+VL                K+   G  LD PD    R  D MR 
Sbjct: 231 QPYQGLSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRM 267
Query: 374 VWKL 377
            W+ 
Sbjct: 268 CWQF 271

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 114/304 (37%), Gaps = 69/304 (22%)
Query: 93  RCKILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
           +  +L ++G+G+FG V E         E +  VA+K V      RE    + E  V++  
Sbjct: 18  KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLR-------KNSYRSFP-IDLV 196
             H +     V++           +V E +    L  +LR        N  R  P +  +
Sbjct: 78  TCHHV-----VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
            ++  ++ + +A+++  + +H DL   N ++     VK+ D+  ++R             
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-MTR------------- 178
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE 315
                  D   T    +    ++  R + APE +    +    D+WS G +L E+ S  E
Sbjct: 179 -------DIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRA 373
             +Q   N       E+VL                K+   G  LD PD    R  D MR 
Sbjct: 231 QPYQGLSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRM 267
Query: 374 VWKL 377
            W+ 
Sbjct: 268 CWQF 271

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 114/304 (37%), Gaps = 69/304 (22%)
Query: 93  RCKILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
           +  +L ++G+G+FG V E         E +  VA+K V      RE    + E  V++  
Sbjct: 18  KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLR-------KNSYRSFP-IDLV 196
             H +     V++           +V E +    L  +LR        N  R  P +  +
Sbjct: 78  TCHHV-----VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
            ++  ++ + +A+++  + +H DL   N ++     VK+ D+  ++R             
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-MTR------------- 178
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE 315
                  D   T    +    ++  R + APE +    +    D+WS G +L E+ S  E
Sbjct: 179 -------DIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRA 373
             +Q   N       E+VL                K+   G  LD PD    R  D MR 
Sbjct: 231 QPYQGLSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRM 267
Query: 374 VWKL 377
            W+ 
Sbjct: 268 CWQF 271

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 65/304 (21%), Positives = 114/304 (37%), Gaps = 69/304 (22%)
Query: 93  RCKILSKMGEGTFGQVVE-----CFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRL 145
           +  +L ++G+G+FG V E         E +  VA+K V      RE    + E  V++  
Sbjct: 15  KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 74
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLR-------KNSYRSFP-IDLV 196
             H +     V++           +V E +    L  +LR        N  R  P +  +
Sbjct: 75  TCHHV-----VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 129
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
            ++  ++ + +A+++  + +H DL   N ++     VK+ D+  ++R             
Sbjct: 130 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG-MTR------------- 175
Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE 315
                  D   T    +    ++  R + APE +    +    D+WS G +L E+ S  E
Sbjct: 176 -------DIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 227
Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRA 373
             +Q   N       E+VL                K+   G  LD PD    R  D MR 
Sbjct: 228 QPYQGLSN-------EQVL----------------KFVMDGGYLDQPDNCPERVTDLMRM 264
Query: 374 VWKL 377
            W+ 
Sbjct: 265 CWQF 268

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 23/135 (17%)
Query: 179 LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           L D +R+N  R    DL+     Q+ + ++++ ++RL+H DL   N+L+ S  +VK+ D+
Sbjct: 105 LLDHVRENRGRLGSQDLL-NWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDF 163
Query: 239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP 298
                                 +L+D   T + H D   V     + A E IL   + + 
Sbjct: 164 GL-------------------ARLLDIDETEY-HADGGKV--PIKWMALESILRRRFTHQ 201
Query: 299 CDLWSVGCILVELCS 313
            D+WS G  + EL +
Sbjct: 202 SDVWSYGVTVWELMT 216

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	438
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	0.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	1e-179
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-177
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-151
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-148
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-139
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-115
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	3e-53
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	4e-53
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	5e-50
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	7e-50
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-49
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	7e-49
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-48
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	6e-48
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-47
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-47
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	4e-47
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	6e-47
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-45
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-45
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	4e-45
3o0g_A	292	Cell division protein kinase 5; kinase activator c	4e-45
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	5e-45
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-44
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-44
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	5e-44
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	7e-44
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-43
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-42
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-41
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-41
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-41
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	4e-41
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-40
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-40
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	8e-40
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	8e-40
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	8e-40
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-39
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-39
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-39
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-39
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	6e-39
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	8e-39
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-38
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-38
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	1e-38
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-38
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-38
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-38
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-38
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	6e-38
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	7e-38
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	8e-38
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-37
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-37
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-37
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-37
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-37
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-37
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-37
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	4e-37
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-36
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-36
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-36
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-36
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-36
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-36
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-36
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	5e-36
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-36
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	5e-36
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-35
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-35
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-35
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-35
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-35
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-35
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-35
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	8e-35
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-34
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-34
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-34
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	4e-34
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	4e-34
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	6e-34
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	9e-34
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-33
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-32
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-32
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	4e-32
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-32
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	7e-32
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	9e-32
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-31
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-30
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-30
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	8e-30
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-28
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-28
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-28
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	3e-28
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-26
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-26
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-25
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-25
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	4e-24
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-23
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-23
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-23
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	9e-23
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-22
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-22
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-22
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-22
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-22
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-22
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-22
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	6e-22
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-21
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-21
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-21
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-21
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	3e-21
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-21
3aln_A	327	Dual specificity mitogen-activated protein kinase;	5e-21
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	5e-21
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	7e-21
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-20
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-20
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-20
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-20
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-20
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-20
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	7e-20
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	8e-20
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-19
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	4e-19
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	6e-19
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	7e-19
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	1e-18
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-18
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-18
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	3e-18
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	4e-18
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	4e-18
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	5e-18
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	6e-18
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	7e-18
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-17
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-17
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-17
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-17
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-17
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-17
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	7e-17
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	7e-17
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-16
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-16
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-16
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-16
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-16
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-16
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	4e-16
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-16
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-15
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-15
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-15
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-15
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-15
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	5e-15
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	6e-15
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	6e-15
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	7e-15
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-14
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	5e-14
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-13
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-13
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-13
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-13
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	7e-13
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	8e-13
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	1e-12
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-12
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-12
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-12
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-11
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-11
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-11
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	9e-11
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-10
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-10
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-10
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-10
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-10
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-10
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	5e-10
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	6e-10
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	6e-10
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	9e-10
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-09
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-09
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-09
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-09
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-09
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-09
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-09
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	8e-09
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-08
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-08
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-08
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-08
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-08
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	9e-08
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-07
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-07
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-07
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	4e-07
3pls_A	298	Macrophage-stimulating protein receptor; protein k	7e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-07
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	8e-07
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-06
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-06
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-06
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-06
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-05
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-05
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	4e-05
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	1e-04
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-04
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-04
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	4e-04

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  529 bits (1364), Expect = 0.0
 Identities = 134/359 (37%), Positives = 209/359 (58%), Gaps = 10/359 (2%)

Query: 66  PRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV 125
               +  ++ DD+  H+ +  G  L     ++ KMG+GTFG+V+ C   + K+  A+K+V
Sbjct: 9   SGRENLYFQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVV 68

Query: 126 RSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
           R+I KY  +A IE D+L+++   DI     V+    F Y +H+C++FE LGPSLY+ + +
Sbjct: 69  RNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITR 128

Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
           N+Y  F I+ ++    ++L+++ ++ ++ L HTDLKPENILL    + K           
Sbjct: 129 NNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDG 188

Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
           K    ++   KS+ IKLIDFG  TF+   H  +++TR YRAPEVIL LGW+   D+WS G
Sbjct: 189 KKIQIYR--TKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFG 246

Query: 306 CILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRR-AEKYFRRGA-RLDWPD 363
           C+L EL +G  LF+THE++EHLAMME ++ P+P +M+  A +    KY  +   +L WP+
Sbjct: 247 CVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPE 306

Query: 364 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
            A+S +S++ V K L L  +I   +        D L  +L+ DP  R    E L+H F 
Sbjct: 307 NASSINSIKHVKKCLPLYKIIKHEL------FCDFLYSILQIDPTLRPSPAELLKHKFL 359

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  501 bits (1293), Expect = e-179
 Identities = 158/347 (45%), Positives = 226/347 (65%), Gaps = 16/347 (4%)

Query: 80  GHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSINKYREAAMIE 138
            H +   G+ L+ R +I+  +GEG FG+VVEC D++     VA+KIV+++++Y EAA  E
Sbjct: 2   MHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSE 61

Query: 139 IDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVR 197
           I VL+ L   D   T RCVQ+  WF++  HICIVFE LG S YDF+++N +  F +D +R
Sbjct: 62  IQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIR 121

Query: 198 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 257
           ++  Q+ +SV F+H  +L HTDLKPENIL V ++Y +  + K            +    +
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD--------ERTLIN 173

Query: 258 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 317
             IK++DFGS T++ + HS +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +
Sbjct: 174 PDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV 233

Query: 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
           F TH++ EHLAMMER+LGPLP HM+ +  +R  KYF    RLDW + +++   +    K 
Sbjct: 234 FPTHDSKEHLAMMERILGPLPKHMIQKTRKR--KYFHHD-RLDWDEHSSAGRYVSRACKP 290

Query: 378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
           L+   ++ Q V+H    L DL+Q +L YDPA+R+  REAL+HPFF  
Sbjct: 291 LK-EFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFFDL 334

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  498 bits (1285), Expect = e-177
 Identities = 154/351 (43%), Positives = 232/351 (66%), Gaps = 16/351 (4%)

Query: 76  DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
           DDK+GH V  IG+ L  R +I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREA
Sbjct: 3   DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 62

Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A +EI+VL+++   D      CV + +WF++  H+CI FE LG + ++FL++N+++ +P+
Sbjct: 63  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 122

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
             VR +  QL  ++ F+HE +L HTDLKPENIL V++E+  + +           S  + 
Sbjct: 123 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEH--------KSCEEK 174

Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
             K+++I++ DFGS TF+H+ H+ +V+TRHYR PEVIL LGW  PCD+WS+GCIL E   
Sbjct: 175 SVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234

Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
           G  LFQTHEN EHL MME++LGP+P HM+ R  ++  KYF +G  L W + ++    ++ 
Sbjct: 235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQ--KYFYKG-GLVWDENSSDGRYVKE 291

Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             K L+   ++   ++H    L DL++ +L +DPA+R+   EAL HPFF  
Sbjct: 292 NCKPLK-SYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFAG 339

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  435 bits (1121), Expect = e-151
 Identities = 120/365 (32%), Positives = 190/365 (52%), Gaps = 37/365 (10%)

Query: 76  DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD  G YV    +++  R ++L  +G+G+FGQVV+ +D++  + VA+K+VR+  ++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140

Query: 136 MIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
             EI +L+ L + D   T   + +   F +RNHIC+ FE L  +LY+ ++KN ++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200

Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
           LVR+    +L+ +  +H+ R+IH DLKPENILL                           
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ------------------------- 235

Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
              S IK+IDFGS+ +EHQ     + +R YRAPEVILG  +  P D+WS+GCIL EL +G
Sbjct: 236 QGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295

Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDW------PDGATSR 368
             L    +  + LA M  +LG     + + A +RA+ +        +       DG+   
Sbjct: 296 YPLLPGEDEGDQLACMIELLGMPSQKL-LDASKRAKNFVSSKGYPRYCTVTTLSDGSVVL 354

Query: 369 DSMRAVWKLLRLPNLIMQHVDHSAG----DLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
           +  R+    LR P    +  +   G      +D L+  L +DPA R+   +ALRHP+  R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414

Query: 425 DVRRP 429
            + +P
Sbjct: 415 RLPKP 419

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  426 bits (1096), Expect = e-148
 Identities = 119/369 (32%), Positives = 187/369 (50%), Gaps = 44/369 (11%)

Query: 76  DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD +  Y+   GE    R +I S +G+G+FGQVV+ +D  ++E VAIKI+++   +   A
Sbjct: 38  DDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA 97

Query: 136 MIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
            IE+ +L+ + +HD       V ++  F +RNH+C+VFE L  +LYD LR  ++R   ++
Sbjct: 98  QIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLN 157

Query: 195 LVRELGRQLLESVAFMH--ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
           L R+  +Q+  ++ F+   EL +IH DLKPENILL +                       
Sbjct: 158 LTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN----------------------- 194

Query: 253 NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 312
             PK SAIK++DFGS+    Q     + +R YR+PEV+LG+ ++   D+WS+GCILVE+ 
Sbjct: 195 --PKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMH 252

Query: 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
           +GE LF     ++ +  +  VLG  P H+ +    +A K+F +     W    T      
Sbjct: 253 TGEPLFSGANEVDQMNKIVEVLGIPPAHI-LDQAPKARKFFEKLPDGTWNLKKTKDGKRE 311

Query: 373 AVWKLLR-LPNLIMQHVDHSAG--------------DLIDLLQGLLRYDPAERLKAREAL 417
                 R L N++        G                 DL+  +L YDP  R++   AL
Sbjct: 312 YKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYAL 371

Query: 418 RHPFFTRDV 426
           +H FF +  
Sbjct: 372 QHSFFKKTA 380

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  402 bits (1034), Expect = e-139
 Identities = 99/367 (26%), Positives = 168/367 (45%), Gaps = 47/367 (12%)

Query: 76  DDKDGHYVFAIGENLT-PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA 134
               G++    GE     R  ++ K+G G F  V    D      VA+KIVR    Y EA
Sbjct: 2   YRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEA 61

Query: 135 AMIEIDVLQRLARHD------IGGTRCVQIRNWFDYRN----HICIVFEKLGPSLYDFLR 184
           A  EI +LQR+   D      +G    +++ + F+++     H+ +VFE LG +L   ++
Sbjct: 62  AEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIK 121

Query: 185 KNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243
           K  +R  P+  V+++ +QLL  + +MH    +IHTD+KPEN+L+   +  +         
Sbjct: 122 KYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE--------- 172

Query: 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWS 303
                           IK+ D G+  +  + ++  + TR YR+PEV+LG  W    D+WS
Sbjct: 173 ------------NLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWS 220

Query: 304 VGCILVELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGA 357
             C++ EL +G+ LF+  E      + +H+A +  +LG LP ++ +R  +    +F    
Sbjct: 221 TACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYL-LRNGKYTRTFFNS-- 277

Query: 358 RLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL 417
                 G     S    W L  +     +     A ++ D L  +L+ DP +R  A   +
Sbjct: 278 -----RGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV 332

Query: 418 RHPFFTR 424
            HP+   
Sbjct: 333 NHPWLKD 339

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score =  341 bits (876), Expect = e-115
 Identities = 105/390 (26%), Positives = 184/390 (47%), Gaps = 50/390 (12%)

Query: 72  PWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY 131
                 K G+++  IG+    R  ++ K+G G F  V   +D + K+ VA+K+V+S   Y
Sbjct: 17  DPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHY 76

Query: 132 REAAMIEIDVLQRLARHDI---GGTRCVQIRNWFDYR----NHICIVFEKLGPSLYDFLR 184
            E A+ EI +L+ +   D         VQ+ + F        HIC+VFE LG  L  ++ 
Sbjct: 77  TETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWII 136

Query: 185 KNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEY------VKVPD 237
           K++Y+  P+  V+++ +Q+L+ + ++H + R+IHTD+KPENILL   E        +  +
Sbjct: 137 KSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATE 196

Query: 238 YKFLSRSSKDGSYFKNLP----------------KSSAIKLIDFGSTTFEHQDHSYVVST 281
           ++        GS     P                +   +K+ D G+  + H+  +  + T
Sbjct: 197 WQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQT 256

Query: 282 RHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE------HLAMMERVLG 335
           R YR+ EV++G G+N P D+WS  C+  EL +G+ LF+ H   E      H+A++  +LG
Sbjct: 257 RQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLG 316

Query: 336 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD- 394
            +P  +++      E + ++G                   K   L  ++++  + S  + 
Sbjct: 317 KVPRKLIVAGKYSKEFFTKKGDLKHITKL-----------KPWGLFEVLVEKYEWSQEEA 365

Query: 395 --LIDLLQGLLRYDPAERLKAREALRHPFF 422
               D L  +L   P +R  A E LRHP+ 
Sbjct: 366 AGFTDFLLPMLELIPEKRATAAECLRHPWL 395

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  180 bits (459), Expect = 3e-53
 Identities = 86/346 (24%), Positives = 143/346 (41%), Gaps = 75/346 (21%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARHD- 149
           + L  +GEG++G V++C + +   +VAIK     +   +     AM EI +L++L RH+ 
Sbjct: 28  ENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFL-ESDDDKMVKKIAMREIKLLKQL-RHEN 85

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           +     V +      +    +VFE +  ++ D L           +V++   Q++  + F
Sbjct: 86  L-----VNLLEVCKKKKRWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGF 139

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 268
            H   +IH D+KPENIL+                 S+ G           +KL DFG + 
Sbjct: 140 CHSHNIIHRDIKPENILV-----------------SQSGV----------VKLCDFGFAR 172

Query: 269 TFEHQDHSY--VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENL 324
           T       Y   V+TR YRAPE+++G    Y    D+W++GC++ E+  GE LF    ++
Sbjct: 173 TLAAPGEVYDDEVATRWYRAPELLVG-DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI 231

Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP--- 381
           + L  +   LG L                             +       +  +RLP   
Sbjct: 232 DQLYHIMMCLGNLIPR-------------------HQELFNKNPV-----FAGVRLPEIK 267

Query: 382 --NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
               + +     +  +IDL +  L  DP +R    E L H FF  D
Sbjct: 268 EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  179 bits (456), Expect = 4e-53
 Identities = 89/352 (25%), Positives = 156/352 (44%), Gaps = 78/352 (22%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARHD- 149
           + + K+GEG++G V +C + +  ++VAIK     ++        A+ EI +L++L +H  
Sbjct: 6   EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFL-ESEDDPVIKKIALREIRMLKQL-KHPN 63

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           +     V +   F  +  + +VFE    ++   L +   R  P  LV+ +  Q L++V F
Sbjct: 64  L-----VNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNF 117

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 268
            H+   IH D+KPENIL+                 +K             IKL DFG + 
Sbjct: 118 CHKHNCIHRDVKPENILI-----------------TKHSV----------IKLCDFGFAR 150

Query: 269 TFEHQDHSY--VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENL 324
                   Y   V+TR YR+PE+++G    Y  P D+W++GC+  EL SG  L+    ++
Sbjct: 151 LLTGPSDYYDDEVATRWYRSPELLVG-DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV 209

Query: 325 EHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP-- 381
           + L ++ + LG  +P H                        +T++      +  +++P  
Sbjct: 210 DQLYLIRKTLGDLIPRH--------------------QQVFSTNQY-----FSGVKIPDP 244

Query: 382 ---NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                +     + +   + LL+G L  DP ERL   + L HP+F  ++R   
Sbjct: 245 EDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF-ENIREIE 295

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  171 bits (435), Expect = 5e-50
 Identities = 77/350 (22%), Positives = 136/350 (38%), Gaps = 100/350 (28%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIG 151
            IL ++G G   +V +   NEKK++ AIK V    + N+  ++   EI  L +L +    
Sbjct: 31  SILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-QQ--H 86

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+V  +H
Sbjct: 87  SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 144

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF 270
           +  ++H+DLKP N L+V                  DG           +KLIDFG +   
Sbjct: 145 QHGIVHSDLKPANFLIV------------------DGM----------LKLIDFGIANQM 176

Query: 271 EHQDHSYVVSTR----HYRAPEVILGLGW-----------NYPCDLWSVGCILVELCSGE 315
           +    S V  ++    +Y  PE I  +             +   D+WS+GCIL  +  G+
Sbjct: 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236

Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
             FQ   N   ++ +  ++ P                      +++PD            
Sbjct: 237 TPFQQIIN--QISKLHAIIDP-------------------NHEIEFPDIPEK-------- 267

Query: 376 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
                             DL D+L+  L+ DP +R+   E L HP+    
Sbjct: 268 ------------------DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 299

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  170 bits (434), Expect = 7e-50
 Identities = 84/353 (23%), Positives = 139/353 (39%), Gaps = 75/353 (21%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA-------AMIEIDVLQRL-- 145
           + ++++G G +G V +  D      VA+K VR +              + E+ +L+RL  
Sbjct: 12  EPVAEIGVGAYGTVYKARDPHSGHFVALKSVR-VPNGGGGGGGLPISTVREVALLRRLEA 70

Query: 146 ARHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
             H  +     V   +  D    + +VFE +   L  +L K      P + +++L RQ L
Sbjct: 71  FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 130

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
             + F+H   ++H DLKPENIL+                 +  G           +KL D
Sbjct: 131 RGLDFLHANCIVHRDLKPENILV-----------------TSGG----------TVKLAD 163

Query: 265 FG-------STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 317
           FG                  VV T  YRAPEV+L   +  P D+WSVGCI  E+   + L
Sbjct: 164 FGLARIYSYQMALTPV----VV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL 218

Query: 318 FQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376
           F  +   + L  +  ++G P                       DWP   +          
Sbjct: 219 FCGNSEADQLGKIFDLIGLPPED--------------------DWPRDVSLPRGAFPPRG 258

Query: 377 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
              + +++   ++ S      LL  +L ++P +R+ A  AL+H +  +D   P
Sbjct: 259 PRPVQSVV-PEMEESG---AQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 307

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  169 bits (429), Expect = 7e-49
 Identities = 77/355 (21%), Positives = 136/355 (38%), Gaps = 100/355 (28%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIG 151
            IL ++G G   +V +   NEKK++ AIK V    + N+  ++   EI  L +L +    
Sbjct: 12  SILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-QQ--H 67

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+V  +H
Sbjct: 68  SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 125

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF 270
           +  ++H+DLKP N L+V                  DG           +KLIDFG +   
Sbjct: 126 QHGIVHSDLKPANFLIV------------------DGM----------LKLIDFGIANQM 157

Query: 271 EHQDHSYVVSTR----HYRAPEVILGLG-----------WNYPCDLWSVGCILVELCSGE 315
           +    S V  ++    +Y  PE I  +             +   D+WS+GCIL  +  G+
Sbjct: 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217

Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
             FQ   N   ++ +  ++ P                      +++PD            
Sbjct: 218 TPFQQIIN--QISKLHAIIDP-------------------NHEIEFPDIPEK-------- 248

Query: 376 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                             DL D+L+  L+ DP +R+   E L HP+         
Sbjct: 249 ------------------DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 285

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  170 bits (432), Expect = 2e-48
 Identities = 94/382 (24%), Positives = 148/382 (38%), Gaps = 86/382 (22%)

Query: 66  PRTGSPPWRPDDKDGHYVFAI--------GENLTPRCKILSKMGEGTFGQVVECFDNEKK 117
           P          DKDG  V  +                     +G G+FG V +    +  
Sbjct: 20  PSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSG 79

Query: 118 ELVAIKIVRSINKY--REAAMIEIDVLQRLARHDIGGTRCVQIRNWF------DYRNHIC 169
           ELVAIK V    ++  RE     + ++++L  H       V++R +F          ++ 
Sbjct: 80  ELVAIKKVLQDKRFKNRE-----LQIMRKL-DHC----NIVRLRYFFYSSGEKKDEVYLN 129

Query: 170 IVFEKLGPSLYDFLR--KNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
           +V + +  ++Y   R    + ++ P+  V+    QL  S+A++H   + H D+KP+N+LL
Sbjct: 130 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 189

Query: 228 VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST-TFEHQDH--SYVVSTRHY 284
                                    + P ++ +KL DFGS       +   SY+  +R+Y
Sbjct: 190 -------------------------D-PDTAVLKLCDFGSAKQLVRGEPNVSYIC-SRYY 222

Query: 285 RAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMV 342
           RAPE+I G   +Y    D+WS GC+L EL  G+ +F     ++ L  + +VLG  P    
Sbjct: 223 RAPELIFGAT-DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT-PTREQ 280

Query: 343 IRA--DRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ 400
           IR       E  F +                    K      +        A   I L  
Sbjct: 281 IREMNPNYTEFKFPQ-------------------IKAHPWTKVFRPRTPPEA---IALCS 318

Query: 401 GLLRYDPAERLKAREALRHPFF 422
            LL Y P  RL   EA  H FF
Sbjct: 319 RLLEYTPTARLTPLEACAHSFF 340

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  166 bits (422), Expect = 6e-48
 Identities = 82/346 (23%), Positives = 145/346 (41%), Gaps = 66/346 (19%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--IGG 152
           +++ K+G G + +V E  +    E V +KI++ + K +     EI +L+ L      I  
Sbjct: 39  QLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLRGGPNIITL 96

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              V+            +VFE +  +  DF  K  Y++     +R    ++L+++ + H 
Sbjct: 97  ADIVKDPVSRTP----ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHS 148

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
           + ++H D+KP N+++                            +   ++LID+G   F H
Sbjct: 149 MGIMHRDVKPHNVMID--------------------------HEHRKLRLIDWGLAEFYH 182

Query: 273 QDHSYV--VSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSG-EALFQTHENLEHLA 328
               Y   V++R+++ PE+++    ++Y  D+WS+GC+L  +    E  F  H+N + L 
Sbjct: 183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242

Query: 329 MMERVLGP-----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
            + +VLG            I  D R      R +R  W                  + + 
Sbjct: 243 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER---------------FVHSE 287

Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
               V   A   +D L  LLRYD   RL AREA+ HP+F   V + 
Sbjct: 288 NQHLVSPEA---LDFLDKLLRYDHQSRLTAREAMEHPYF-YTVVKD 329

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  165 bits (420), Expect = 1e-47
 Identities = 83/342 (24%), Positives = 148/342 (43%), Gaps = 68/342 (19%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARHD- 149
           + ++K+GEGT+G+V +  D    E VAIK +R +    E     A+ E+ +L+ L +H  
Sbjct: 37  RRITKLGEGTYGEVYKAIDTVTNETVAIKRIR-LEHEEEGVPGTAIREVSLLKEL-QHRN 94

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     +++++   + + + ++FE     L  ++  +      + +++    QL+  V F
Sbjct: 95  I-----IELKSVIHHNHRLHLIFEYAENDLKKYM--DKNPDVSMRVIKSFLYQLINGVNF 147

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--- 266
            H  R +H DLKP+N+LL              S +S+             +K+ DFG   
Sbjct: 148 CHSRRCLHRDLKPQNLLLSV------------SDASETP----------VLKIGDFGLAR 185

Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENL 324
           +     +  ++ + T  YR PE++LG   +Y    D+WS+ CI  E+     LF     +
Sbjct: 186 AFGIPIRQFTHEIITLWYRPPEILLG-SRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI 244

Query: 325 EHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD--SMRAVWKLLRLP 381
           + L  +  VLG P                        WP      D       ++   L 
Sbjct: 245 DQLFKIFEVLGLPDDT--------------------TWPGVTALPDWKQSFPKFRGKTLK 284

Query: 382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
            ++   +D      +DLL  +L  DP +R+ A+ AL HP+F+
Sbjct: 285 RVLGALLDDEG---LDLLTAMLEMDPVKRISAKNALEHPYFS 323

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  166 bits (423), Expect = 2e-47
 Identities = 97/368 (26%), Positives = 154/368 (41%), Gaps = 80/368 (21%)

Query: 87  GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY--REAAMIEIDVLQR 144
           GE           +G G+FG V +    E  E VAIK V    ++  RE     + +++ 
Sbjct: 35  GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRE-----LQIMRI 88

Query: 145 LARHDIGGTRCVQIRNWF------DYRNHICIVFEKLGPSLYDFLR--KNSYRSFPIDLV 196
           + +H       V ++ +F           + +V E +  ++Y   R      ++ P+ L+
Sbjct: 89  V-KHP----NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLI 143

Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
           +    QLL S+A++H + + H D+KP+N+LL                         + P 
Sbjct: 144 KLYMYQLLRSLAYIHSIGICHRDIKPQNLLL-------------------------D-PP 177

Query: 257 SSAIKLIDFGS--TTFEHQDH-SYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVEL 311
           S  +KLIDFGS       + + SY+  +R+YRAPE+I G   NY    D+WS GC++ EL
Sbjct: 178 SGVLKLIDFGSAKILIAGEPNVSYIC-SRYYRAPELIFG-ATNYTTNIDIWSTGCVMAEL 235

Query: 312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRAD--RRAEKYFRRGARLDWPDGATSRD 369
             G+ LF     ++ L  + +VLG  P    I+       E  F +              
Sbjct: 236 MQGQPLFPGESGIDQLVEIIKVLGT-PSREQIKTMNPNYMEHKFPQ-------------- 280

Query: 370 SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
                 +      +        A   IDL+  LL Y P+ RL A EAL HPFF  ++R  
Sbjct: 281 -----IRPHPFSKVFRPRTPPDA---IDLISRLLEYTPSARLTAIEALCHPFF-DELRTG 331

Query: 430 TLLVATGE 437
              +  G 
Sbjct: 332 EARMPNGR 339

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  163 bits (416), Expect = 4e-47
 Identities = 91/351 (25%), Positives = 143/351 (40%), Gaps = 72/351 (20%)

Query: 95  KILSKMGEGTFGQVVECFD-NEKKELVAIKIVRSINKYRE----AAMIEIDVLQRL--AR 147
           + ++++GEG +G+V +  D       VA+K VR +    E    + + E+ VL+ L    
Sbjct: 14  ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLETFE 72

Query: 148 HD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           H  +     V   +  D    + +VFE +   L  +L K      P + ++++  QLL  
Sbjct: 73  HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + F+H  R++H DLKP+NIL+                 +  G           IKL DFG
Sbjct: 133 LDFLHSHRVVHRDLKPQNILV-----------------TSSG----------QIKLADFG 165

Query: 267 -------STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
                             VV T  YRAPEV+L   +  P DLWSVGCI  E+   + LF+
Sbjct: 166 LARIYSFQMALTSV----VV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 220

Query: 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379
              +++ L  +  V+G  P                      WP                 
Sbjct: 221 GSSDVDQLGKILDVIGL-PGEED------------------WPRDVALPRQAFHSKSAQP 261

Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
           +   +   +D       DLL   L ++PA+R+ A  AL HP+F +D+ R  
Sbjct: 262 IEKFV-TDIDELG---KDLLLKCLTFNPAKRISAYSALSHPYF-QDLERCK 307

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  164 bits (418), Expect = 6e-47
 Identities = 77/352 (21%), Positives = 136/352 (38%), Gaps = 100/352 (28%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIG 151
            IL ++G G   +V +   NEKK++ AIK V    + N+  ++   EI  L +L +    
Sbjct: 59  SILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-QQ--H 114

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+V  +H
Sbjct: 115 SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 172

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF 270
           +  ++H+DLKP N L+V                  DG           +KLIDFG +   
Sbjct: 173 QHGIVHSDLKPANFLIV------------------DGM----------LKLIDFGIANQM 204

Query: 271 EHQDHSYVVSTR----HYRAPEVILGLGWN-----------YPCDLWSVGCILVELCSGE 315
           +    S V  ++    +Y  PE I  +  +              D+WS+GCIL  +  G+
Sbjct: 205 QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264

Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
             FQ   N   ++ +  ++ P                      +++PD            
Sbjct: 265 TPFQQIIN--QISKLHAIIDP-------------------NHEIEFPDIPEK-------- 295

Query: 376 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR 427
                             DL D+L+  L+ DP +R+   E L HP+      
Sbjct: 296 ------------------DLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH 329

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  158 bits (403), Expect = 1e-45
 Identities = 90/343 (26%), Positives = 144/343 (41%), Gaps = 76/343 (22%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARHD- 149
             L K+GEGT+G V +  +N   E  A+K +R + K  E      + EI +L+ L +H  
Sbjct: 5   HGLEKIGEGTYGVVYKAQNN-YGETFALKKIR-LEKEDEGIPSTTIREISILKEL-KHSN 61

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     V++ +    +  + +VFE L   L   L             +    QLL  +A+
Sbjct: 62  I-----VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAY 115

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 268
            H+ R++H DLKP+N+L+                 +++G           +K+ DFG + 
Sbjct: 116 CHDRRVLHRDLKPQNLLI-----------------NREG----------ELKIADFGLAR 148

Query: 269 TFEHQDHSY---VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHEN 323
            F      Y   +V T  YRAP+V++G    Y    D+WSVGCI  E+ +G  LF     
Sbjct: 149 AFGIPVRKYTHEIV-TLWYRAPDVLMG-SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE 206

Query: 324 LEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD--SMRAVWKLLRL 380
            + L  + R+LG P                       +WP+            V++    
Sbjct: 207 ADQLMRIFRILGTPNSK--------------------NWPNVTELPKYDPNFTVYE---- 242

Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
           P      +       IDLL  +L+ DP +R+ A++AL H +F 
Sbjct: 243 PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  159 bits (404), Expect = 1e-45
 Identities = 95/345 (27%), Positives = 149/345 (43%), Gaps = 79/345 (22%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARHD- 149
           + L K+GEGT+G V +  D+ +  +VA+K +R ++   E     A+ EI +L+ L  H  
Sbjct: 24  QKLEKVGEGTYGVVYKAKDS-QGRIVALKRIR-LDAEDEGIPSTAIREISLLKEL-HHPN 80

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     V + +       + +VFE +   L   L +N         ++    QLL  VA 
Sbjct: 81  I-----VSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAH 134

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 268
            H+ R++H DLKP+N+L+                 + DG+          +KL DFG + 
Sbjct: 135 CHQHRILHRDLKPQNLLI-----------------NSDGA----------LKLADFGLAR 167

Query: 269 TFEHQDHSY---VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHEN 323
            F     SY   VV T  YRAP+V++G    Y    D+WS+GCI  E+ +G+ LF    +
Sbjct: 168 AFGIPVRSYTHEVV-TLWYRAPDVLMG-SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD 225

Query: 324 LEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP- 381
            + L  +  +LG P P                     +WP            WK      
Sbjct: 226 DDQLPKIFSILGTPNPR--------------------EWPQVQELPL-----WKQRTFQV 260

Query: 382 ---NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                    +     + IDLL  +L +DP +R+ AR+A+ HP+F 
Sbjct: 261 FEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  158 bits (402), Expect = 4e-45
 Identities = 93/355 (26%), Positives = 154/355 (43%), Gaps = 77/355 (21%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARHD- 149
           K L K+G GT+  V +  +      VA+K V+  ++  E     A+ EI +++ L +H+ 
Sbjct: 8   KQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE--EGTPSTAIREISLMKEL-KHEN 64

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLR----KNSYRSFPIDLVRELGRQLLE 205
           I     V++ +     N + +VFE +   L  ++      N+ R   ++LV+    QLL+
Sbjct: 65  I-----VRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
            +AF HE +++H DLKP+N+L+                 +K G           +KL DF
Sbjct: 120 GLAFCHENKILHRDLKPQNLLI-----------------NKRGQ----------LKLGDF 152

Query: 266 G-STTFEHQDHSY---VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQ 319
           G +  F    +++   VV T  YRAP+V++G    Y    D+WS GCIL E+ +G+ LF 
Sbjct: 153 GLARAFGIPVNTFSSEVV-TLWYRAPDVLMG-SRTYSTSIDIWSCGCILAEMITGKPLFP 210

Query: 320 THENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD--SMRAVWK 376
              + E L ++  ++G P                        WP                
Sbjct: 211 GTNDEEQLKLIFDIMGTPNES--------------------LWPSVTKLPKYNPNIQQRP 250

Query: 377 LLRLPNLIMQHVDHSAGDL-IDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
              L  ++  H         +D L GLL+ +P  RL A++AL HP+F  +     
Sbjct: 251 PRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF-AEYYHHA 304

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  157 bits (400), Expect = 4e-45
 Identities = 92/344 (26%), Positives = 149/344 (43%), Gaps = 76/344 (22%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARHD- 149
           + L K+GEGT+G V +  + E  E+VA+K VR ++   E    +A+ EI +L+ L +H  
Sbjct: 5   EKLEKIGEGTYGTVFKAKNRETHEIVALKRVR-LDDDDEGVPSSALREICLLKEL-KHKN 62

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     V++ +       + +VFE     L  +    +      ++V+    QLL+ + F
Sbjct: 63  I-----VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGF 116

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 268
            H   ++H DLKP+N+L+                 +++G           +KL +FG + 
Sbjct: 117 CHSRNVLHRDLKPQNLLI-----------------NRNGE----------LKLANFGLAR 149

Query: 269 TFEHQDHSY--VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCS-GEALFQTHEN 323
            F      Y   V T  YR P+V+ G    Y    D+WS GCI  EL + G  LF  ++ 
Sbjct: 150 AFGIPVRCYSAEVVTLWYRPPDVLFG-AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV 208

Query: 324 LEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL-- 380
            + L  + R+LG P                        WP      D     +K   +  
Sbjct: 209 DDQLKRIFRLLGTPTEE--------------------QWPSMTKLPD-----YKPYPMYP 243

Query: 381 -PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
               ++  V        DLLQ LL+ +P +R+ A EAL+HP+F+
Sbjct: 244 ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  159 bits (404), Expect = 5e-45
 Identities = 93/360 (25%), Positives = 144/360 (40%), Gaps = 75/360 (20%)

Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY--REAAMIEID 140
                     R ++    G+GTFG V    +      VAIK V    ++  RE   ++I 
Sbjct: 14  ADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE---LQIM 70

Query: 141 VLQRLARHDIGGTRCVQIRNWF-----DYRNHIC--IVFEKLGPSLYDFLRKNSYR--SF 191
               +  H       VQ++++F       R  I   +V E +  +L+   R    R  + 
Sbjct: 71  QDLAVLHHP----NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAP 126

Query: 192 PIDLVRELGRQLLESVAFMHE--LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249
           P  L++    QL+ S+  +H   + + H D+KP N+L+                      
Sbjct: 127 PPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV---------------------- 164

Query: 250 YFKNLPKSSAIKLIDFGS--TTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPC--DLWSV 304
              N      +KL DFGS       + + +Y+  +R+YRAPE+I G   +Y    D+WSV
Sbjct: 165 ---N-EADGTLKLCDFGSAKKLSPSEPNVAYIC-SRYYRAPELIFGNQ-HYTTAVDIWSV 218

Query: 305 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADR--RAEKYFRRGARLDWP 362
           GCI  E+  GE +F+   +   L  + RVLG  P   V+R       +        + W 
Sbjct: 219 GCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC-PSREVLRKLNPSHTDVDLYNSKGIPWS 277

Query: 363 DGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                         +         H    A +  DLL  LL+Y P ER+K  EAL HP+F
Sbjct: 278 -------------NVFS------DHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  157 bits (399), Expect = 1e-44
 Identities = 89/352 (25%), Positives = 145/352 (41%), Gaps = 80/352 (22%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARHD- 149
             L K+GEGT+  V +        LVA+K +R  ++  E     A+ E+ +L+ L +H  
Sbjct: 5   IKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDL-KHAN 61

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     V + +       + +VFE L   L  +L  +      +  V+    QLL  +A+
Sbjct: 62  I-----VTLHDIIHTEKSLTLVFEYLDKDLKQYL-DDCGNIINMHNVKLFLFQLLRGLAY 115

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 268
            H  +++H DLKP+N+L+                 ++ G           +KL DFG + 
Sbjct: 116 CHRQKVLHRDLKPQNLLI-----------------NERG----------ELKLADFGLAR 148

Query: 269 TFEHQDHSY---VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHEN 323
                  +Y   VV T  YR P+++LG   +Y    D+W VGCI  E+ +G  LF     
Sbjct: 149 AKSIPTKTYDNEVV-TLWYRPPDILLG-STDYSTQIDMWGVGCIFYEMATGRPLFPGSTV 206

Query: 324 LEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP- 381
            E L  + R+LG P                        WP   ++ +     +K    P 
Sbjct: 207 EEQLHFIFRILGTPTEE--------------------TWPGILSNEE-----FKTYNYPK 241

Query: 382 ---NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                ++ H      D  DLL  LL+++   R+ A +A++HPFF   +    
Sbjct: 242 YRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF-LSLGERI 292

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  156 bits (396), Expect = 2e-44
 Identities = 65/335 (19%), Positives = 106/335 (31%), Gaps = 89/335 (26%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIG 151
           + LS++G G++G+V +    E   L A+K   S     K R   + E+   +++ +H   
Sbjct: 60  QRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP-- 117

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              CV++   ++    + +  E  GPSL          S P   V    R  L ++A +H
Sbjct: 118 --CCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLH 174

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF 270
              L+H D+KP NI L                    G            KL DFG     
Sbjct: 175 SQGLVHLDVKPANIFL-----------------GPRGR----------CKLGDFGLLVEL 207

Query: 271 EHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
                         Y APE++ G  +    D++S+G  ++E+     L    E  + L  
Sbjct: 208 GTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL-R 265

Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
              +       +                         S +                    
Sbjct: 266 QGYLPPEFTAGL-------------------------SSE-------------------- 280

Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
                L  +L  +L  DP  R  A   L  P   +
Sbjct: 281 -----LRSVLVMMLEPDPKLRATAEALLALPVLRQ 310

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  157 bits (398), Expect = 5e-44
 Identities = 90/374 (24%), Positives = 148/374 (39%), Gaps = 90/374 (24%)

Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY--RE------------ 133
           E  + +  +   +G G+FG V E FD E  +  A+K V    +Y  RE            
Sbjct: 3   ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNI 62

Query: 134 ----------------AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP 177
                                 D  +   +++        +        ++ ++ E +  
Sbjct: 63  IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD 122

Query: 178 SLYDFLR--KNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 235
           +L+  L+    S RS P++L+     QL  +V F+H L + H D+KP+N+L+        
Sbjct: 123 TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV-------- 174

Query: 236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS--TTFEHQDH-SYVVSTRHYRAPEVILG 292
                            N  K + +KL DFGS       +   +Y+  +R YRAPE++LG
Sbjct: 175 -----------------N-SKDNTLKLCDFGSAKKLIPSEPSVAYIC-SRFYRAPELMLG 215

Query: 293 LGWNYPC--DLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRA--DRR 348
               Y    DLWS+GC+  EL  G+ LF    +++ L  + +++G  P    +       
Sbjct: 216 -ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGT-PTKEQMIRMNPHY 273

Query: 349 AEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA 408
            E  F      DW              K+L          + +    IDLL+ +LRY+P 
Sbjct: 274 TEVRFPTLKAKDWR-------------KILP---------EGTPSLAIDLLEQILRYEPD 311

Query: 409 ERLKAREALRHPFF 422
            R+   EA+ HPFF
Sbjct: 312 LRINPYEAMAHPFF 325

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  155 bits (395), Expect = 7e-44
 Identities = 68/341 (19%), Positives = 126/341 (36%), Gaps = 81/341 (23%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-IGGT 153
           ++   +G G++     C         A+KI   I+K +     EI++L R  +H  I   
Sbjct: 25  EVKEDIGVGSYSVCKRCIHKATNMEFAVKI---IDKSKRDPTEEIEILLRYGQHPNI--- 78

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             + +++ +D   ++ +V E + G  L D + +  +  F       +   + ++V ++H 
Sbjct: 79  --ITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTITKTVEYLHA 134

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE 271
             ++H DLKP NIL V                              +I++ DFG +    
Sbjct: 135 QGVVHRDLKPSNILYVDES-----------------------GNPESIRICDFGFAKQLR 171

Query: 272 HQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
            ++        T ++ APEV+   G++  CD+WS+G +L  + +G   F    +     +
Sbjct: 172 AENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEI 231

Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
           + R+                        +     G          W            V 
Sbjct: 232 LARIG---------------------SGKFSLSGGY---------WN----------SVS 251

Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
            +A DL+     +L  DP +RL A   LRHP+     + P 
Sbjct: 252 DTAKDLVS---KMLHVDPHQRLTAALVLRHPWIVHWDQLPQ 289

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  155 bits (394), Expect = 1e-43
 Identities = 87/344 (25%), Positives = 149/344 (43%), Gaps = 75/344 (21%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA------AMIEIDVLQRLARH 148
           + L  +GEG F  V +  D    ++VAIK ++  ++          A+ EI +LQ L  H
Sbjct: 13  EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SH 71

Query: 149 D-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
             I     + + + F ++++I +VF+ +   L   ++ NS        ++      L+ +
Sbjct: 72  PNI-----IGLLDAFGHKSNISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGL 125

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 266
            ++H+  ++H DLKP N+LL                  ++G           +KL DFG 
Sbjct: 126 EYLHQHWILHRDLKPNNLLL-----------------DENG----------VLKLADFGL 158

Query: 267 STTFEHQDHSY---VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTH 321
           + +F   + +Y   VV TR YRAPE++ G    Y    D+W+VGCIL EL          
Sbjct: 159 AKSFGSPNRAYTHQVV-TRWYRAPELLFG-ARMYGVGVDMWAVGCILAELLLRVPFLPGD 216

Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL- 380
            +L+ L  +   LG  P           E+         WPD  +  D     +   +  
Sbjct: 217 SDLDQLTRIFETLGT-PT----------EEQ--------WPDMCSLPD-----YVTFKSF 252

Query: 381 -PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
               +      +  DL+DL+QGL  ++P  R+ A +AL+  +F+
Sbjct: 253 PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 296

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  151 bits (383), Expect = 1e-42
 Identities = 68/340 (20%), Positives = 128/340 (37%), Gaps = 73/340 (21%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           + ++ +G+G FGQVV+  +       AIK +R   +     + E+ +L  L  H      
Sbjct: 9   EEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-NHQYVVRY 67

Query: 150 ----IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
               +     V+       ++ + I  E     +LYD +   +  +   D    L RQ+L
Sbjct: 68  YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQIL 126

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLI 263
           E+++++H   +IH DLKP NI +  +  VK+ D  F L+++         L   +     
Sbjct: 127 EALSYIHSQGIIHRDLKPMNIFIDESRNVKIGD--FGLAKNVHRSLDILKLDSQNLPGSS 184

Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTHE 322
           D  ++          + T  Y A EV+ G G  N   D++S+G I  E+      F T  
Sbjct: 185 DNLTS---------AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP---FSTGM 232

Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
              ++  ++++                     R   +++P                    
Sbjct: 233 ERVNI--LKKL---------------------RSVSIEFPP------------------- 250

Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                 D+       +++ L+ +DP +R  AR  L   + 
Sbjct: 251 ---DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  149 bits (378), Expect = 1e-41
 Identities = 82/340 (24%), Positives = 131/340 (38%), Gaps = 87/340 (25%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHD-IGGTRCVQI 158
           GEG+F    +C   +  +  A+KI   I+K  EA    EI  L+    H  I     V++
Sbjct: 20  GEGSFSICRKCVHKKSNQAFAVKI---ISKRMEANTQKEITALKLCEGHPNI-----VKL 71

Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
              F  + H  +V E L G  L++  R    + F       + R+L+ +V+ MH++ ++H
Sbjct: 72  HEVFHDQLHTFLVMELLNGGELFE--RIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVH 129

Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQDHS 276
            DLKPEN+L                              +  IK+IDFG +      +  
Sbjct: 130 RDLKPENLLFTDEN------------------------DNLEIKIIDFGFARLKPPDNQP 165

Query: 277 Y--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF----QTHENLEHLAMM 330
                 T HY APE++   G++  CDLWS+G IL  + SG+  F    ++      + +M
Sbjct: 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM 225

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
           +++                           +   A         WK          +V  
Sbjct: 226 KKIK---------------------KGDFSFEGEA---------WK----------NVSQ 245

Query: 391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
            A DLI   QGLL  DP +RLK      + +     +  +
Sbjct: 246 EAKDLI---QGLLTVDPNKRLKMSGLRYNEWLQDGSQLSS 282

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  151 bits (383), Expect = 2e-41
 Identities = 69/356 (19%), Positives = 129/356 (36%), Gaps = 90/356 (25%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHD-IGGTRCV 156
            +G G+ G VV    + +   VA+K    +   + + A++EI +L     H  +     +
Sbjct: 22  ILGYGSSGTVVFQ-GSFQGRPVAVKR---MLIDFCDIALMEIKLLTESDDHPNV-----I 72

Query: 157 QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG-----RQLLESVAFMH 211
           +          + I  E    +L D +   +     + L +E       RQ+   VA +H
Sbjct: 73  RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF 270
            L++IH DLKP+NIL+ +              SS+  +  +   ++  I + DFG     
Sbjct: 133 SLKIIHRDLKPQNILVST--------------SSRFTADQQTGAENLRILISDFGLCKKL 178

Query: 271 EHQDHSYVVSTRH------YRAPEVILGLGW-------NYPCDLWSVGCIL-VELCSGEA 316
           +    S+  +  +      +RAPE++                D++S+GC+    L  G+ 
Sbjct: 179 DSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238

Query: 317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376
            F                                              +   + +R ++ 
Sbjct: 239 PF------------------------------------------GDKYSRESNIIRGIFS 256

Query: 377 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 432
           L  +  L  + +   A DLI     ++ +DP +R  A + LRHP F    ++   L
Sbjct: 257 LDEMKCLHDRSLIAEATDLI---SQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFL 309

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  151 bits (384), Expect = 3e-41
 Identities = 78/358 (21%), Positives = 144/358 (40%), Gaps = 84/358 (23%)

Query: 78  KDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREA 134
             G ++ +   +L+   + + K+G G +G+V+ C D       AIKI+            
Sbjct: 23  TPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK 82

Query: 135 AMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPI 193
            + E+ VL+ L   +I     +++ ++F+ + +  +V E   G  L+D +       F  
Sbjct: 83  LLEEVAVLKLLDHPNI-----MKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK--FNE 135

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
                + +Q+L  V ++H+  ++H DLKPEN+LL S E                      
Sbjct: 136 VDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKE---------------------- 173

Query: 254 LPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
             K + IK++DFG +            + T +Y APEV+    ++  CD+WS+G IL  L
Sbjct: 174 --KDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFIL 230

Query: 312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM 371
            +G   F    + E   ++ +V              + +  F      +W          
Sbjct: 231 LAGYPPFGGQTDQE---ILRKVE-------------KGKYTFD---SPEWK--------- 262

Query: 372 RAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
                          +V   A    DL++ +L++D   R+ A++AL HP+      + 
Sbjct: 263 ---------------NVSEGA---KDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKK 302

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  148 bits (376), Expect = 4e-41
 Identities = 87/356 (24%), Positives = 150/356 (42%), Gaps = 82/356 (23%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARHD- 149
           + L+K+G+GTFG+V +    +  + VA+K V  +   +E     A+ EI +LQ L +H+ 
Sbjct: 20  EKLAKIGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLL-KHEN 77

Query: 150 IGGTRCV---QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           +     +   +   +   +  I +VF+     L   L  N    F +  ++ + + LL  
Sbjct: 78  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNG 136

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + ++H  +++H D+K  N+L+                 ++DG           +KL DFG
Sbjct: 137 LYYIHRNKILHRDMKAANVLI-----------------TRDGV----------LKLADFG 169

Query: 267 -----STTFEHQDHSY---VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEA 316
                S     Q + Y   VV T  YR PE++LG   +Y  P DLW  GCI+ E+ +   
Sbjct: 170 LARAFSLAKNSQPNRYTNRVV-TLWYRPPELLLG-ERDYGPPIDLWGAGCIMAEMWTRSP 227

Query: 317 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
           + Q +     LA++ ++ G   P                      WP+           +
Sbjct: 228 IMQGNTEQHQLALISQLCGSITPE--------------------VWPNVDNYEL-----Y 262

Query: 376 KLLRLP----NLIMQHVDHSAGDL--IDLLQGLLRYDPAERLKAREALRHPFFTRD 425
           + L L       +   +     D   +DL+  LL  DPA+R+ + +AL H FF  D
Sbjct: 263 EKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 318

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  150 bits (380), Expect = 1e-40
 Identities = 83/354 (23%), Positives = 141/354 (39%), Gaps = 84/354 (23%)

Query: 80  GHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAM 136
           G            R  I+  +G+G+FG+V++C D   ++  A+K++    + NK     +
Sbjct: 10  GRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL 69

Query: 137 IEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDL 195
            E+++L++L   +I     +++    +  +   IV E   G  L+D + K     F    
Sbjct: 70  REVELLKKLDHPNI-----MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHD 122

Query: 196 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 255
              + +Q+   + +MH+  ++H DLKPENILL S E                        
Sbjct: 123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE------------------------ 158

Query: 256 KSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
           K   IK+IDFG +T   Q+      + T +Y APEV+ G  ++  CD+WS G IL  L S
Sbjct: 159 KDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLS 217

Query: 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373
           G   F      +   +++RV                +  F       W            
Sbjct: 218 GTPPFYGKNEYD---ILKRVE-------------TGKYAFDLP---QWR----------- 247

Query: 374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR 427
                         +   A DLI   + +L + P+ R+ A + L HP+  +   
Sbjct: 248 -------------TISDDAKDLI---RKMLTFHPSLRITATQCLEHPWIQKYSS 285

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  149 bits (379), Expect = 2e-40
 Identities = 80/343 (23%), Positives = 141/343 (41%), Gaps = 85/343 (24%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDI 150
           K    +G+G+FG+V+ C D    +  A+K++  R + +  +   +  E+ +L++L   +I
Sbjct: 29  KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 88

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                +++  +F+ + +  +V E   G  L+D +       F       + RQ+L  + +
Sbjct: 89  -----MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITY 141

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           MH+ +++H DLKPEN+LL S                          K + I++IDFG +T
Sbjct: 142 MHKNKIVHRDLKPENLLLESKS------------------------KDANIRIIDFGLST 177

Query: 270 FEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                      + T +Y APEV+ G  ++  CD+WS G IL  L SG   F      +  
Sbjct: 178 HFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD-- 234

Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            ++++V              + +  F       W                          
Sbjct: 235 -ILKKVE-------------KGKYTFELP---QWK------------------------K 253

Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
           V  SA DLI   + +L Y P+ R+ AR+AL H +     +   
Sbjct: 254 VSESAKDLI---RKMLTYVPSMRISARDALDHEWIQTYTKEQI 293

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  144 bits (365), Expect = 8e-40
 Identities = 78/349 (22%), Positives = 125/349 (35%), Gaps = 80/349 (22%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMIEIDVLQRLARHD-IGGTRCVQI 158
           GEG   +V  C +    +  A+KI+ +     R     E+++L +   H  +     +++
Sbjct: 22  GEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNV-----LEL 76

Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
             +F+  +   +VFEK+ G S+   + K   R F       + + +  ++ F+H   + H
Sbjct: 77  IEFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAH 134

Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQDHS 276
            DLKPENIL                             + S +K+ DF   +  +     
Sbjct: 135 RDLKPENILCEHPN------------------------QVSPVKICDFDLGSGIKLNGDC 170

Query: 277 YVVSTR---------HYRAPEVILGLGW---NY--PCDLWSVGCILVELCSGEALFQTHE 322
             +ST           Y APEV+         Y   CDLWS+G IL  L SG   F    
Sbjct: 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV-GR 229

Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
                        P   +M+  + +  +  F      DW                     
Sbjct: 230 CGSDCGWDRGEACPACQNMLFESIQEGKYEFPDK---DWA-------------------- 266

Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
               H+  +A DLI     LL  D  +RL A + L+HP+        TL
Sbjct: 267 ----HISCAAKDLI---SKLLVRDAKQRLSAAQVLQHPWVQGCAPENTL 308

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  144 bits (366), Expect = 8e-40
 Identities = 73/337 (21%), Positives = 125/337 (37%), Gaps = 84/337 (24%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-IGGTRCVQIR 159
           G G  G+V+ECF     +  A+K+   +      A  E+D   + +    I     V I 
Sbjct: 38  GLGVNGKVLECFHRRTGQKCALKL---LYD-SPKARQEVDHHWQASGGPHI-----VCIL 88

Query: 160 NWFD----YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           + ++     +  + I+ E + G  L+  +++   ++F      E+ R +  ++ F+H   
Sbjct: 89  DVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN 148

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQ 273
           + H D+KPEN+L  S E                        K + +KL DFG +      
Sbjct: 149 IAHRDVKPENLLYTSKE------------------------KDAVLKLTDFGFAKETTQN 184

Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT-HENLEHLAMMER 332
                  T +Y APEV+    ++  CD+WS+G I+  L  G   F +         M  R
Sbjct: 185 ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR 244

Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
           +                     R  +  +P+           W            V   A
Sbjct: 245 I---------------------RLGQYGFPNP---------EWS----------EVSEDA 264

Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
             LI   + LL+ DP ERL   + + HP+  + +  P
Sbjct: 265 KQLI---RLLLKTDPTERLTITQFMNHPWINQSMVVP 298

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  144 bits (364), Expect = 8e-40
 Identities = 61/369 (16%), Positives = 114/369 (30%), Gaps = 79/369 (21%)

Query: 78  KDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA 135
              ++++ + + L          G+G    V      +  +L AIK+    S  +  +  
Sbjct: 5   STSNHLWLLSDIL----------GQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ 54

Query: 136 MIEIDVLQRLARHD-IGGTRCVQIRNWFDYRN--HICIVFEKL-GPSLYDFLRKN-SYRS 190
           M E +VL++L  H  I     V++    +     H  ++ E     SLY  L +  +   
Sbjct: 55  MREFEVLKKL-NHKNI-----VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG 108

Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250
            P      + R ++  +  + E  ++H ++KP NI+ V  E                   
Sbjct: 109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE------------------- 149

Query: 251 FKNLPKSSAIKLIDFG-STTFEHQDHSY-VVSTRHYRAPEVILGLGWNYP--------CD 300
                  S  KL DFG +   E  +    +  T  Y  P++                  D
Sbjct: 150 ----DGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVD 205

Query: 301 LWSVGCILVELCSGEALFQTHENLEHLA-MMERVLGPLPHHMVIRADRRAEKYFRRGARL 359
           LWS+G       +G   F+  E       +M +++   P          +         +
Sbjct: 206 LWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS------GAISGVQKAENGPI 259

Query: 360 DWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH 419
           DW        S+    ++L                L  +L  +L  D  +     +    
Sbjct: 260 DWSGDMPVSCSLSRGLQVL----------------LTPVLANILEADQEKCWGFDQFFAE 303

Query: 420 PFFTRDVRR 428
                    
Sbjct: 304 TSDILHRGN 312

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  142 bits (361), Expect = 1e-39
 Identities = 64/345 (18%), Positives = 98/345 (28%), Gaps = 100/345 (28%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH------ 148
           K +  +G G FGQV +       +   IK    +    E A  E+  L +L  H      
Sbjct: 14  KEIELIGSGGFGQVFKAKHRIDGKTYVIKR---VKYNNEKAEREVKALAKL-DHVNIVHY 69

Query: 149 ------DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGR 201
                            +       + I  E     +L  ++ K         L  EL  
Sbjct: 70  NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+ + V ++H  +LI+ DLKP NI L                                +K
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFL-----------------VDTKQ----------VK 162

Query: 262 LIDFG-STTFEH-QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
           + DFG  T+ ++    +    T  Y +PE I    +    DL+++G IL EL     +  
Sbjct: 163 IGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCD 219

Query: 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379
           T           R  G +                              +           
Sbjct: 220 TAFETSKFFTDLR-DGIISDIF-------------------------DKK---------- 243

Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
                             LLQ LL   P +R    E LR     +
Sbjct: 244 ---------------EKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  142 bits (361), Expect = 1e-39
 Identities = 59/341 (17%), Positives = 109/341 (31%), Gaps = 72/341 (21%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIG 151
             L K+G G FG V +C       + AIK  +   + +   + A+ E+     L +H   
Sbjct: 14  HELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHS-- 71

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVA 208
               V+  + +   +H+ I  E   G SL D + +N      F    +++L  Q+   + 
Sbjct: 72  --HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++H + L+H D+KP NI +           +                     K+ D G  
Sbjct: 130 YIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN--------KVMFKIGDLGHV 181

Query: 269 TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
           T              + A EV+          D++++   +V     E L +  +    +
Sbjct: 182 TRISSPQV-EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEI 240

Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
                  G LP                                        R+P      
Sbjct: 241 RQ-----GRLP----------------------------------------RIP------ 249

Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
               + +  +LL+ ++  DP  R  A   ++H       R+
Sbjct: 250 -QVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASRK 289

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  143 bits (361), Expect = 4e-39
 Identities = 75/403 (18%), Positives = 133/403 (33%), Gaps = 130/403 (32%)

Query: 77  DKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR------SINK 130
            ++ ++       L  +  +   +G+G++G V    +N+ + + AIKI+          K
Sbjct: 11  RENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPK 70

Query: 131 YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYR 189
             E    E+ ++++L   +I      ++   ++   +IC+V E   G  L D L      
Sbjct: 71  DVERIKTEVRLMKKLHHPNI-----ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDD 125

Query: 190 --------------------------------------SFPIDLVRELGRQLLESVAFMH 211
                                                      L+  + RQ+  ++ ++H
Sbjct: 126 STGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF 270
              + H D+KPEN L  +                          KS  IKL+DFG S  F
Sbjct: 186 NQGICHRDIKPENFLFST-------------------------NKSFEIKLVDFGLSKEF 220

Query: 271 EHQDHSY------VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEALFQTHE 322
              ++           T ++ APEV+     +Y   CD WS G +L  L  G   F    
Sbjct: 221 YKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFP-GV 279

Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
           N      + +VL                       +L + +           +       
Sbjct: 280 N--DADTISQVL---------------------NKKLCFEN---------PNYN------ 301

Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
                +   A DL+     LL  +  ER  A  AL+HP+ ++ 
Sbjct: 302 ----VLSPLARDLL---SNLLNRNVDERFDAMRALQHPWISQF 337

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  143 bits (362), Expect = 4e-39
 Identities = 69/344 (20%), Positives = 126/344 (36%), Gaps = 94/344 (27%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD-I 150
             L K+GEG+FG+ +     E      IK +       K RE +  E+ VL  + +H  I
Sbjct: 27  VRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHPNI 85

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                VQ R  F+    + IV +   G  L+  +       F  D + +   Q+  ++  
Sbjct: 86  -----VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKH 140

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 268
           +H+ +++H D+K +NI L                 +KDG+          ++L DFG + 
Sbjct: 141 VHDRKILHRDIKSQNIFL-----------------TKDGT----------VQLGDFGIAR 173

Query: 269 TFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
                       + T +Y +PE+     +N   D+W++GC+L ELC+ +  F+   ++++
Sbjct: 174 VLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA-GSMKN 232

Query: 327 LAM--MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
           L +  +     P+  H                          S D               
Sbjct: 233 LVLKIISGSFPPVSLHY-------------------------SYD--------------- 252

Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
                     L  L+  L + +P +R      L   F  + + +
Sbjct: 253 ----------LRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEK 286

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  144 bits (364), Expect = 6e-39
 Identities = 83/410 (20%), Positives = 146/410 (35%), Gaps = 97/410 (23%)

Query: 29  PPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGE 88
           P P P P   P             P       F     ++G    +    D + V    +
Sbjct: 11  PVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVT--SQ 68

Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH 148
            L          G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++ 
Sbjct: 69  VL----------GLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQC 114

Query: 149 D-IGGTRCVQIRNWFD----YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
             I     V+I + ++     R  + IV E L G  L+  ++    ++F      E+ + 
Sbjct: 115 PHI-----VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 169

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           + E++ ++H + + H D+KPEN+L  S                           ++ +KL
Sbjct: 170 IGEAIQYLHSINIAHRDVKPENLLYTSKR------------------------PNAILKL 205

Query: 263 IDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ- 319
            DFG        +S      T +Y APEV+    ++  CD+WS+G I+  L  G   F  
Sbjct: 206 TDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 265

Query: 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379
            H       M  R+             R  +  F      +W                  
Sbjct: 266 NHGLAISPGMKTRI-------------RMGQYEFPNP---EWS----------------- 292

Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
                   V      LI   + LL+ +P +R+   E + HP+  +  + P
Sbjct: 293 -------EVSEEVKMLI---RNLLKTEPTQRMTITEFMNHPWIMQSTKVP 332

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  145 bits (368), Expect = 8e-39
 Identities = 74/353 (20%), Positives = 138/353 (39%), Gaps = 95/353 (26%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------------SINKYREAAMIEID 140
             + K+G G +G+V+ C +       AIK+++              +I K+ E    EI 
Sbjct: 39  FKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEIS 98

Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ L   +I     +++ + F+ + +  +V E   G  L++ +       F       +
Sbjct: 99  LLKSLDHPNI-----IKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--FDECDAANI 151

Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L  + ++H+  ++H D+KPENILL +                              
Sbjct: 152 MKQILSGICYLHKHNIVHRDIKPENILLENKN------------------------SLLN 187

Query: 260 IKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 317
           IK++DFG ++F  +D+     + T +Y APEV+    +N  CD+WS G I+  L  G   
Sbjct: 188 IKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246

Query: 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
           F    + +   ++++V              + + YF      DW                
Sbjct: 247 FGGQNDQD---IIKKVE-------------KGKYYFDFN---DWK--------------- 272

Query: 378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                    ++   A +LI   + +L YD  +R  A EAL   +  +      
Sbjct: 273 ---------NISDEAKELI---KLMLTYDYNKRCTAEEALNSRWIKKYANNIN 313

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  142 bits (359), Expect = 1e-38
 Identities = 74/350 (21%), Positives = 122/350 (34%), Gaps = 94/350 (26%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---------EAAMIEIDVLQRL 145
           ++   +G+G F  V  C + E  +  A+KI   ++  +         E    E  +   L
Sbjct: 27  ELCEVIGKGPFSVVRRCINRETGQQFAVKI---VDVAKFTSSPGLSTEDLKREASICHML 83

Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFL--RKNSYRSFPIDLVRELGRQ 202
               I     V++   +     + +VFE + G  L   +  R ++   +   +     RQ
Sbjct: 84  KHPHI-----VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +LE++ + H+  +IH D+KP  +LL S E                         S+ +KL
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVLLASKE------------------------NSAPVKL 174

Query: 263 IDFG-STTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
             FG +             V T H+ APEV+    +  P D+W  G IL  L SG   F 
Sbjct: 175 GGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY 234

Query: 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379
                    + E ++             + +          W                  
Sbjct: 235 -GTKER---LFEGII-------------KGKYKMNPR---QWSH---------------- 258

Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
                   +  SA DL+   + +L  DPAER+   EAL HP+     R  
Sbjct: 259 --------ISESAKDLV---RRMLMLDPAERITVYEALNHPWLKERDRYA 297

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  140 bits (356), Expect = 1e-38
 Identities = 74/334 (22%), Positives = 127/334 (38%), Gaps = 80/334 (23%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHDIGGT 153
             +  +G G F +V         +L A+K ++    +R++++  EI VL+++   +I   
Sbjct: 12  IFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENI--- 68

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             V + + ++   H  +V + + G  L+D + +     +       + +Q+L +V ++HE
Sbjct: 69  --VTLEDIYESTTHYYLVMQLVSGGELFDRILERGV--YTEKDASLVIQQVLSAVKYLHE 124

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFE 271
             ++H DLKPEN+L ++ E                        ++S I + DFG S   +
Sbjct: 125 NGIVHRDLKPENLLYLTPE------------------------ENSKIMITDFGLSKMEQ 160

Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
           +   S    T  Y APEV+    ++   D WS+G I   L  G   F   E    L   E
Sbjct: 161 NGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE-ETESKL--FE 217

Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
           ++                   F       W D                        +  S
Sbjct: 218 KIK-------------EGYYEFESP---FWDD------------------------ISES 237

Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
           A D I     LL  DP ER    +AL HP+   +
Sbjct: 238 AKDFIC---HLLEKDPNERYTCEKALSHPWIDGN 268

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score =  141 bits (358), Expect = 1e-38
 Identities = 90/344 (26%), Positives = 148/344 (43%), Gaps = 52/344 (15%)

Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLA 146
           N++   ++ S +GEG +G V         E+VAIK +   +K   A     EI +L+   
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF- 66

Query: 147 RHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +H+ I     +Q  + F+  N + I+ E +   L+  +          D ++    Q L 
Sbjct: 67  KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSD---DHIQYFIYQTLR 123

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLID 264
           +V  +H   +IH DLKP N+L+ S   +KV D  F L+R   + +   + P      +++
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCD--FGLARIIDESAADNSEPTGQQSGMVE 181

Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN 323
                       +V  TR YRAPEV+L    ++   D+WS GCIL EL     +F   + 
Sbjct: 182 ------------FVA-TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228

Query: 324 LEHLAMMERVLG-PLPHHMVIR-ADRRAEKYFR---RGARLDWPDGATSRDSMRAVWKLL 378
              L ++  ++G P   + +      RA +Y +                           
Sbjct: 229 RHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEK--------------- 273

Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
             P      V+      IDLLQ +L +DPA+R+ A+EAL HP+ 
Sbjct: 274 MFPR-----VNPKG---IDLLQRMLVFDPAKRITAKEALEHPYL 309

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  140 bits (356), Expect = 1e-38
 Identities = 69/349 (19%), Positives = 129/349 (36%), Gaps = 80/349 (22%)

Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
           + L  +  I   +G G FG V  C +   K+    K V+     +     EI +L    R
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-R 59

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           H       + +   F+    + ++FE + G  +++ +  +++       +     Q+ E+
Sbjct: 60  HR----NILHLHESFESMEELVMIFEFISGLDIFERINTSAF-ELNEREIVSYVHQVCEA 114

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + F+H   + H D++PENI+  +                          +SS IK+I+FG
Sbjct: 115 LQFLHSHNIGHFDIRPENIIYQT-------------------------RRSSTIKIIEFG 149

Query: 267 STTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
                    ++  + +   Y APEV      +   D+WS+G ++  L SG   F    N 
Sbjct: 150 QARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ 209

Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
           +   ++E ++              AE  F   A   + +                     
Sbjct: 210 Q---IIENIM-------------NAEYTFDEEA---FKE--------------------- 229

Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLV 433
              +   A D +     LL  +   R+ A EAL+HP+  + + R +  V
Sbjct: 230 ---ISIEAMDFV---DRLLVKERKSRMTASEALQHPWLKQKIERVSTKV 272

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  142 bits (358), Expect = 2e-38
 Identities = 45/246 (18%), Positives = 92/246 (37%), Gaps = 36/246 (14%)

Query: 95  KILSKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARH 148
            +   +GEG F QV E       D + K+   +K+ +  N +        ++ L+   +H
Sbjct: 68  YVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQH 127

Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFL---RKNSYRSFPIDLVRELGRQLL 204
                  ++  +   ++N   +V E     +L + +   +    +  P  LV     ++L
Sbjct: 128 MF-----MKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRML 182

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
             +  +H+  +IH D+KP+N +L                 +           S+ + LID
Sbjct: 183 YMIEQVHDCEIIHGDIKPDNFIL----------------GNGFLEQDDEDDLSAGLALID 226

Query: 265 FG-STTFEHQDHSYVVS----TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
            G S   +      + +    T  ++  E++    WNY  D + V   +  +  G  +  
Sbjct: 227 LGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKV 286

Query: 320 THENLE 325
            +E  E
Sbjct: 287 KNEGGE 292

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score =  142 bits (360), Expect = 2e-38
 Identities = 92/343 (26%), Positives = 156/343 (45%), Gaps = 25/343 (7%)

Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI--EIDVLQRL 145
           ++  + +++ K+G+G +G V +  D    E+VA+K I  +     +A     EI +L  L
Sbjct: 6   HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTEL 65

Query: 146 ARHD-IGGTRCVQIRNWF--DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           + H+ I     V + N    D    + +VF+ +   L+  +R N          + +  Q
Sbjct: 66  SGHENI-----VNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEP---VHKQYVVYQ 117

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIK 261
           L++ + ++H   L+H D+KP NILL +  +VKV D  F LSRS  +     N    S  +
Sbjct: 118 LIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVAD--FGLSRSFVNIRRVTNNIPLSINE 175

Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQT 320
             +            YV  TR YRAPE++LG   +    D+WS+GCIL E+  G+ +F  
Sbjct: 176 NTENFDDDQPILTD-YVA-TRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233

Query: 321 HENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379
              +  L  +  V+  P    +       A+               +++  +   WK L 
Sbjct: 234 SSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKV-EIRQSNKRDIFTKWKNLL 292

Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           L        +  A   +DLL  LL+++P +R+ A +AL+HPF 
Sbjct: 293 LKINPKADCNEEA---LDLLDKLLQFNPNKRISANDALKHPFV 332

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  140 bits (356), Expect = 2e-38
 Identities = 84/341 (24%), Positives = 136/341 (39%), Gaps = 84/341 (24%)

Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRL 145
           + L+   ++ S++G G    V  C     ++  A+K    + K  +  ++  EI VL RL
Sbjct: 49  DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALK---VLKKTVDKKIVRTEIGVLLRL 105

Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
           +  +I     ++++  F+    I +V E   G  L+D + +  Y  +      +  +Q+L
Sbjct: 106 SHPNI-----IKLKEIFETPTEISLVLELVTGGELFDRIVEKGY--YSERDAADAVKQIL 158

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
           E+VA++HE  ++H DLKPEN+L  +                            + +K+ D
Sbjct: 159 EAVAYLHENGIVHRDLKPENLLYATPA------------------------PDAPLKIAD 194

Query: 265 FG-STTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
           FG S   EHQ     V  T  Y APE++ G  +    D+WSVG I   L  G   F    
Sbjct: 195 FGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER 254

Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
             +   M  R+L               E YF       W +                   
Sbjct: 255 GDQ--FMFRRIL-------------NCEYYFISP---WWDE------------------- 277

Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                V  +A DL+     L+  DP +RL   +AL+HP+ T
Sbjct: 278 -----VSLNAKDLVR---KLIVLDPKKRLTTFQALQHPWVT 310

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  138 bits (350), Expect = 6e-38
 Identities = 84/357 (23%), Positives = 141/357 (39%), Gaps = 84/357 (23%)

Query: 78  KDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREA 134
             G            R  I+  +G+G+FG+V++C D   ++  A+K++    + NK    
Sbjct: 8   SSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST 67

Query: 135 AMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPI 193
            + E+++L++L   +I     +++    +  +   IV E   G  L+D + K     F  
Sbjct: 68  ILREVELLKKLDHPNI-----MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSE 120

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
                + +Q+   + +MH+  ++H DLKPENILL S E                      
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE---------------------- 158

Query: 254 LPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
             K   IK+IDFG +T   Q+      + T +Y APEV+ G  ++  CD+WS G IL  L
Sbjct: 159 --KDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYIL 215

Query: 312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM 371
            SG   F   +N     +++RV                +  F       W          
Sbjct: 216 LSGTPPF-YGKNEY--DILKRVE-------------TGKYAFDLP---QWR--------- 247

Query: 372 RAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
                           +   A DLI     +L + P+ R+ A + L HP+  +    
Sbjct: 248 ---------------TISDDAKDLIR---KMLTFHPSLRITATQCLEHPWIQKYSSE 286

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  140 bits (354), Expect = 7e-38
 Identities = 72/374 (19%), Positives = 131/374 (35%), Gaps = 90/374 (24%)

Query: 66  PRTGSPPW-RPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKI 124
           P   S    +   +   ++       +    +  ++G+G F  V  C         A KI
Sbjct: 2   PHMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI 61

Query: 125 VRSINK----YREAAMI--EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GP 177
              IN      R+   +  E  + ++L   +I     V++ +     +   +VF+ + G 
Sbjct: 62  ---INTKKLSARDFQKLEREARICRKLQHPNI-----VRLHDSIQEESFHYLVFDLVTGG 113

Query: 178 SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            L++ +    +  +         +Q+LES+A+ H   ++H +LKPEN+LL S        
Sbjct: 114 ELFEDIVAREF--YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA------ 165

Query: 238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGW 295
                             K +A+KL DFG     +   ++     T  Y +PEV+    +
Sbjct: 166 ------------------KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPY 207

Query: 296 NYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRR 355
           + P D+W+ G IL  L  G   F   E+     +  ++                   +  
Sbjct: 208 SKPVDIWACGVILYILLVGYPPFW-DED--QHRLYAQIK-------------AGAYDYPS 251

Query: 356 GARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKARE 415
               +W                          V   A  LID    +L  +P +R+ A +
Sbjct: 252 P---EWD------------------------TVTPEAKSLID---SMLTVNPKKRITADQ 281

Query: 416 ALRHPFFTRDVRRP 429
           AL+ P+     R  
Sbjct: 282 ALKVPWICNRERVA 295

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  141 bits (357), Expect = 8e-38
 Identities = 64/345 (18%), Positives = 113/345 (32%), Gaps = 89/345 (25%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGGTRCVQ 157
            +G G  G +V          VA+K +  + +    A  E+ +L+    H ++     ++
Sbjct: 31  VLGHGAEGTIV-YRGMFDNRDVAVKRI--LPECFSFADREVQLLRESDEHPNV-----IR 82

Query: 158 IRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                  R    I  E    +L +++ +  +    ++    L +Q    +A +H L ++H
Sbjct: 83  YFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLE-PITLLQQTTSGLAHLHSLNIVH 141

Query: 218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQDHS 276
            DLKP NIL+                         N        + DFG         HS
Sbjct: 142 RDLKPHNILISM----------------------PNAHGKIKAMISDFGLCKKLAVGRHS 179

Query: 277 Y-----VVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVE-LCSGEALFQTHENLEHL 327
           +     V  T  + APE++         Y  D++S GC+    +  G   F   ++L+  
Sbjct: 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF--GKSLQRQ 237

Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
           A +      L                     L                           H
Sbjct: 238 ANILLGACSLDC-------------------LHPEK-----------------------H 255

Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 432
            D  A +LI   + ++  DP +R  A+  L+HPFF    ++    
Sbjct: 256 EDVIARELI---EKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFF 297

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  140 bits (354), Expect = 1e-37
 Identities = 82/375 (21%), Positives = 141/375 (37%), Gaps = 87/375 (23%)

Query: 95  KILSKMGEGTFGQV--VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-IG 151
               K+G GT+G V   +  D +  +  A+K +        +A  EI +L+ L +H  + 
Sbjct: 24  YEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLREL-KHPNV- 80

Query: 152 GTRCVQIRNWFDYRNHICI--VFE-------KLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
               + ++  F       +  +F+        +                P  +V+ L  Q
Sbjct: 81  ----ISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQ 136

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L+ + ++H   ++H DLKP NIL++                          P+   +K+
Sbjct: 137 ILDGIHYLHANWVLHRDLKPANILVMGEG-----------------------PERGRVKI 173

Query: 263 IDFG-STTFEHQDHSY-----VVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSG 314
            D G +  F            VV T  YRAPE++LG   +Y    D+W++GCI  EL + 
Sbjct: 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG-ARHYTKAIDIWAIGCIFAELLTS 232

Query: 315 EALFQ---------THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD-- 363
           E +F             + + L  +  V+G  P           +K        DW D  
Sbjct: 233 EPIFHCRQEDIKTSNPYHHDQLDRIFNVMGF-PA----------DK--------DWEDIK 273

Query: 364 -----GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
                    +D  R  +    L   + +H          LLQ LL  DP +R+ + +A++
Sbjct: 274 KMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333

Query: 419 HPFFTRDVRRPTLLV 433
            P+F  +   PT  V
Sbjct: 334 DPYF-LEDPLPTSDV 347

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  138 bits (350), Expect = 1e-37
 Identities = 65/330 (19%), Positives = 110/330 (33%), Gaps = 80/330 (24%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDIGGTRCVQ 157
           G G F  V +C      +  A K +   R     R   + EI VL+          R + 
Sbjct: 38  GRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCP----RVIN 93

Query: 158 IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLI 216
           +   ++  + I ++ E   G  ++             + V  L +Q+LE V ++H+  ++
Sbjct: 94  LHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIV 153

Query: 217 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS 276
           H DLKP+NILL S                              IK++DFG +        
Sbjct: 154 HLDLKPQNILLSSIY------------------------PLGDIKIVDFGMSRKIGHACE 189

Query: 277 Y--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 334
              ++ T  Y APE++         D+W++G I   L +  + F   +N E       + 
Sbjct: 190 LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE---TYLNIS 246

Query: 335 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 394
                                   +D+ +           +            V   A D
Sbjct: 247 ---------------------QVNVDYSEET---------FS----------SVSQLATD 266

Query: 395 LIDLLQGLLRYDPAERLKAREALRHPFFTR 424
            I   Q LL  +P +R  A   L H +  +
Sbjct: 267 FI---QSLLVKNPEKRPTAEICLSHSWLQQ 293

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  139 bits (353), Expect = 1e-37
 Identities = 73/340 (21%), Positives = 128/340 (37%), Gaps = 81/340 (23%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHDIGGT 153
            IL ++G G FG V  C +     +   K +       +     EI ++ +L  H     
Sbjct: 54  DILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHP---- 108

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
           + + + + F+ +  + ++ E L G  L+D +    Y       V    RQ  E +  MHE
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY-KMSEAEVINYMRQACEGLKHMHE 167

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
             ++H D+KPENI+  +                          K+S++K+IDFG  T  +
Sbjct: 168 HSIVHLDIKPENIMCET-------------------------KKASSVKIIDFGLATKLN 202

Query: 273 QDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
            D       +T  + APE++      +  D+W++G +   L SG + F   ++LE    +
Sbjct: 203 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE---TL 259

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
           + V                          ++ + A         +            V  
Sbjct: 260 QNVK---------------------RCDWEFDEDA---------FS----------SVSP 279

Query: 391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
            A D I   + LL+ +P +RL   +AL HP+   D    T
Sbjct: 280 EAKDFI---KNLLQKEPRKRLTVHDALEHPWLKGDHSNLT 316

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  136 bits (346), Expect = 2e-37
 Identities = 70/351 (19%), Positives = 124/351 (35%), Gaps = 92/351 (26%)

Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDVLQ 143
            ++     + + +G G++G+V        +   A K    I KY     +    EI++++
Sbjct: 5   GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKK---IPKYFVEDVDRFKQEIEIMK 61

Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
            L   +I     +++   F+    I +V E   G  L++ +       F       + + 
Sbjct: 62  SLDHPNI-----IRLYETFEDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKD 114

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +L +VA+ H+L + H DLKPEN L ++                            S +KL
Sbjct: 115 VLSAVAYCHKLNVAHRDLKPENFLFLTDS------------------------PDSPLKL 150

Query: 263 IDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF-- 318
           IDFG              V T +Y +P+V+ G  +   CD WS G ++  L  G   F  
Sbjct: 151 IDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSA 209

Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
            T   +     M ++                           +P+           W   
Sbjct: 210 PTDSEV-----MLKIR---------------------EGTFTFPE---------KDWL-- 232

Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
                   +V   A  LI   + LL   P +R+ + +AL H +F + +   
Sbjct: 233 --------NVSPQAESLI---RRLLTKSPKQRITSLQALEHEWFEKQLSSS 272

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score =  140 bits (355), Expect = 2e-37
 Identities = 99/415 (23%), Positives = 153/415 (36%), Gaps = 81/415 (19%)

Query: 66  PRTGSPPWRPDDKDGHYVFAIGE---NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAI 122
            + G    +                  +  R +I   +G G++G V E +D  +K +VAI
Sbjct: 24  QQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAI 83

Query: 123 K-IVRSINKYREAAMI--EIDVLQRLARHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPS 178
           K I+R      +   I  EI +L RL  HD +     + I    +  + + +V E     
Sbjct: 84  KKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSD 142

Query: 179 LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
                R           ++ L   LL  V ++H   ++H DLKP N L+     VKV D 
Sbjct: 143 FKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCD- 199

Query: 239 KF-LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILG 292
            F L+R+        +    S  +      T    ++       +VV TR YRAPE+IL 
Sbjct: 200 -FGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVV-TRWYRAPELILL 257

Query: 293 LGWNY--PCDLWSVGCILVELCS-----------GEALF--------------------Q 319
              NY    D+WS+GCI  EL +              LF                     
Sbjct: 258 QE-NYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFH 316

Query: 320 THENLEHLAMMERVLG-PLPHHMVIRADRRAEKY---FRRGARLDWPDGATSRDSMRAVW 375
           T  N + L ++  +LG P    +       A++Y   F +    D  +            
Sbjct: 317 TRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAE------------ 364

Query: 376 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
              R P          A   I LL+ +L ++P +R+   E L HPFF ++VR   
Sbjct: 365 ---RFPA-----SSADA---IHLLKRMLVFNPNKRITINECLAHPFF-KEVRIAE 407

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  137 bits (348), Expect = 2e-37
 Identities = 78/361 (21%), Positives = 129/361 (35%), Gaps = 86/361 (23%)

Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK------YREAAMIEIDVL 142
           +L  R   L  +G G  G V    DN+  + VAIK +   +        R     EI ++
Sbjct: 8   DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALR-----EIKII 62

Query: 143 QRLARHD--IG--------GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFP 192
           +RL  HD  +         G++           N + IV E +   L + L +       
Sbjct: 63  RRL-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLE-- 119

Query: 193 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
            +  R    QLL  + ++H   ++H DLKP N+ + +                       
Sbjct: 120 -EHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT----------------------- 155

Query: 253 NLPKSSAIKLIDFG--STTFEHQDHS-----YVVSTRHYRAPEVILGL-GWNYPCDLWSV 304
              +   +K+ DFG       H  H       +V T+ YR+P ++L    +    D+W+ 
Sbjct: 156 ---EDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAA 211

Query: 305 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFR---RGARLDW 361
           GCI  E+ +G+ LF     LE + ++   +  +              Y R          
Sbjct: 212 GCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPL 271

Query: 362 PDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
                             LP      +   A   +D L+ +L + P +RL A EAL HP+
Sbjct: 272 TQ---------------LLPG-----ISREA---VDFLEQILTFSPMDRLTAEEALSHPY 308

Query: 422 F 422
            
Sbjct: 309 M 309

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  136 bits (345), Expect = 2e-37
 Identities = 77/353 (21%), Positives = 122/353 (34%), Gaps = 90/353 (25%)

Query: 80  GHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-- 137
           G         +        K+G G FG V    +        IK    INK R    +  
Sbjct: 10  GRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKT---INKDRSQVPMEQ 66

Query: 138 ---EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFL--RKNSYRSF 191
              EI+VL+ L   +I     ++I   F+  +++ IV E   G  L + +   +   ++ 
Sbjct: 67  IEAEIEVLKSLDHPNI-----IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKAL 121

Query: 192 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251
               V EL +Q++ ++A+ H   ++H DLKPENIL                         
Sbjct: 122 SEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS-------------------- 161

Query: 252 KNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 309
                 S IK+IDFG       D        T  Y APEV       + CD+WS G ++ 
Sbjct: 162 ----PHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMY 216

Query: 310 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD 369
            L +G   F    +LE   + ++                 E  +      +         
Sbjct: 217 FLLTGCLPFT-GTSLE--EVQQKAT-------------YKEPNYAV----EC-------- 248

Query: 370 SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                           + +   A DL+   + +L  DP  R  A + L H +F
Sbjct: 249 ----------------RPLTPQAVDLL---KQMLTKDPERRPSAAQVLHHEWF 282

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  136 bits (345), Expect = 4e-37
 Identities = 68/348 (19%), Positives = 120/348 (34%), Gaps = 90/348 (25%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHD- 149
           +I  K+G G F +V           VA+K V+  +    K R   + EID+L++L  H  
Sbjct: 35  RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPN 93

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR--KNSYRSFPIDLVRELGRQLLES 206
           +     ++    F   N + IV E      L   ++  K   R  P   V +   QL  +
Sbjct: 94  V-----IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           +  MH  R++H D+KP N+ +                 +  G           +KL D G
Sbjct: 149 LEHMHSRRVMHRDIKPANVFI-----------------TATGV----------VKLGDLG 181

Query: 267 -STTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
               F  +      +V T +Y +PE I   G+N+  D+WS+GC+L E+ + ++ F   + 
Sbjct: 182 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG-DK 240

Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
           +   ++ +++                     +      P    S                
Sbjct: 241 MNLYSLCKKIE--------------------QCDYPPLPSDHYSE--------------- 265

Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
                     +L  L+   +  DP +R                   +L
Sbjct: 266 ----------ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  134 bits (340), Expect = 1e-36
 Identities = 70/345 (20%), Positives = 124/345 (35%), Gaps = 86/345 (24%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEIDVLQRLAR 147
           ++  ++G G F  V +C      +  A K ++            RE    E+++L+ + R
Sbjct: 8   EMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-R 66

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           H       + + + F+ +  + ++ E + G  L+DFL +        D   +  +Q+L+ 
Sbjct: 67  HP----NIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDG 120

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           V ++H  R+ H DLKPENI+L+                            +  IKLIDFG
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKN-----------------------VPNPRIKLIDFG 157

Query: 267 -STTFEH-QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
            +   E   +   +  T  + APE++         D+WS+G I   L SG + F      
Sbjct: 158 IAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ 217

Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
           E    +  +                          D+ +           +         
Sbjct: 218 E---TLTNIS---------------------AVNYDFDEEY---------FS-------- 236

Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
             +    A D I   + LL  DP  R+   ++L H +     RR 
Sbjct: 237 --NTSELAKDFI---RRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  138 bits (350), Expect = 1e-36
 Identities = 71/342 (20%), Positives = 129/342 (37%), Gaps = 84/342 (24%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI-EIDVLQRLARHDIG 151
           ++  ++G+G F  V  C      +  A  I+  + ++      +  E  + + L   +I 
Sbjct: 14  QLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNI- 72

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               V++ +      H  ++F+ + G  L++ +    Y  +         +Q+LE+V   
Sbjct: 73  ----VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQQILEAVLHC 126

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STT 269
           H++ ++H +LKPEN+LL S                          K +A+KL DFG +  
Sbjct: 127 HQMGVVHRNLKPENLLLASKL------------------------KGAAVKLADFGLAIE 162

Query: 270 FEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
            E +  ++     T  Y +PEV+    +  P DLW+ G IL  L  G   F   E+   L
Sbjct: 163 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFW-DEDQHRL 221

Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
              +++                   F      +W                          
Sbjct: 222 --YQQIK-------------AGAYDFPSP---EWDT------------------------ 239

Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
           V   A DLI+    +L  +P++R+ A EAL+HP+ +      
Sbjct: 240 VTPEAKDLIN---KMLTINPSKRITAAEALKHPWISHRSTVA 278

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  138 bits (350), Expect = 1e-36
 Identities = 83/360 (23%), Positives = 143/360 (39%), Gaps = 52/360 (14%)

Query: 74  RPDDKDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           +    +  Y   +G++   +  R + L  +G G  G V   +D      VAIK + R   
Sbjct: 41  KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 100

Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ +++ +  H   I        +   +    + +V E +  +L   ++ 
Sbjct: 101 NQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 159

Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   + +  L  Q+L  +  +H   +IH DLKP NI++ S                
Sbjct: 160 E----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---------------- 199

Query: 246 KDGSYFKNLPKSSAIKLIDFG-STTFEHQDHS--YVVSTRHYRAPEVILGLGWNYPCDLW 302
                         +K++DFG + T         YVV TR+YRAPEVILG+G+    D+W
Sbjct: 200 -----------DCTLKILDFGLARTAGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIW 247

Query: 303 SVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP 362
           SVGCI+ E+   + LF   + ++    +   LG      + +       Y     +    
Sbjct: 248 SVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK---- 303

Query: 363 DGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
               +  +   ++     P    +H    A    DLL  +L  DPA+R+   +AL+HP+ 
Sbjct: 304 ---YAGLTFPKLFPDSLFPADS-EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  135 bits (342), Expect = 2e-36
 Identities = 68/354 (19%), Positives = 126/354 (35%), Gaps = 86/354 (24%)

Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEID 140
           EN+        ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66

Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +        +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEF 119

Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L  V ++H L++ H DLKPENI+L+                               
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRN-----------------------VPKPR 156

Query: 260 IKLIDFG-STTFEH-QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 317
           IK+IDFG +   +   +   +  T  + APE++         D+WS+G I   L SG + 
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216

Query: 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
           F      E    +  V                          ++ D           +  
Sbjct: 217 FLGDTKQE---TLANVS---------------------AVNYEFEDEY---------FS- 242

Query: 378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
                    +    A D I   + LL  DP +R+  +++L+HP+      +  L
Sbjct: 243 ---------NTSALAKDFI---RRLLVKDPKKRMTIQDSLQHPWIKPKDTQQAL 284

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  139 bits (353), Expect = 2e-36
 Identities = 77/335 (22%), Positives = 117/335 (34%), Gaps = 81/335 (24%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-REAAMIEIDVLQRLARHDIGGT 153
            I  ++G G FG V    +       A K V + ++  +E    EI  +  L RH     
Sbjct: 160 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHP---- 214

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             V + + F+  N + +++E + G  L++ +          D   E  RQ+ + +  MHE
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHE 273

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
              +H DLKPENI+  +                          +S+ +KLIDFG T    
Sbjct: 274 NNYVHLDLKPENIMFTT-------------------------KRSNELKLIDFGLTAHLD 308

Query: 273 QDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
              S      T  + APEV  G    Y  D+WSVG +   L SG + F    + E    +
Sbjct: 309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE---TL 365

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
             V                          +  D A         +            +  
Sbjct: 366 RNVK---------------------SCDWNMDDSA---------FS----------GISE 385

Query: 391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
              D I     LL  DP  R+   +AL HP+ T  
Sbjct: 386 DGKDFIR---KLLLADPNTRMTIHQALEHPWLTPG 417

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  135 bits (341), Expect = 2e-36
 Identities = 73/349 (20%), Positives = 128/349 (36%), Gaps = 88/349 (25%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEIDVLQRLAR 147
            I  ++G G F  V +C +       A K ++            RE    E+ +L+++  
Sbjct: 15  DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFL-RKNSYRSFPIDLVRELGRQLLE 205
           H++     + + + ++ R  + ++ E + G  L+DFL +K S      +      +Q+L+
Sbjct: 75  HNV-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQILD 126

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
            V ++H  ++ H DLKPENI+L+                               IKLIDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-----------------------IPIPHIKLIDF 163

Query: 266 G-STTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
           G +   E       +  T  + APE++         D+WS+G I   L SG + F     
Sbjct: 164 GLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223

Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
            E    +  +                          D+ +           +        
Sbjct: 224 QE---TLANIT---------------------SVSYDFDEEF---------FS------- 243

Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 432
              H    A D I   + LL  +  +RL  +EALRHP+ T    +  ++
Sbjct: 244 ---HTSELAKDFI---RKLLVKETRKRLTIQEALRHPWITPVDNQQAMV 286

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  133 bits (337), Expect = 4e-36
 Identities = 71/354 (20%), Positives = 127/354 (35%), Gaps = 89/354 (25%)

Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR------EAAMIEIDV 141
              +    +  ++G+G F  V  C         A KI   IN  +      +    E  +
Sbjct: 2   TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI---INTKKLSARDFQKLEREARI 58

Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELG 200
            ++L   +I     V++ +     +   +VF+ + G  L++ +    +  +         
Sbjct: 59  CRKLQHPNI-----VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCI 111

Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
           +Q+LES+A+ H   ++H +LKPEN+LL S                          K +A+
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASKA------------------------KGAAV 147

Query: 261 KLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
           KL DFG     +   ++     T  Y +PEV+    ++ P D+W+ G IL  L  G   F
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207

Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
              E+     +  ++                          D+P            W   
Sbjct: 208 -WDED--QHRLYAQIK---------------------AGAYDYPS---------PEWD-- 232

Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 432
                    V   A  LID    +L  +P +R+ A +AL+ P+     R  + +
Sbjct: 233 --------TVTPEAKSLID---SMLTVNPKKRITADQALKVPWICNRERVASAI 275

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  135 bits (341), Expect = 5e-36
 Identities = 69/355 (19%), Positives = 126/355 (35%), Gaps = 86/355 (24%)

Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEID 140
           + +     I  ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67

Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+++   +I     + + + ++ R  + ++ E + G  L+DFL +        +     
Sbjct: 68  ILRQVLHPNI-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSF 120

Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L+ V ++H  ++ H DLKPENI+L+                               
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKN-----------------------IPIPH 157

Query: 260 IKLIDFG-STTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 317
           IKLIDFG +   E       +  T  + APE++         D+WS+G I   L SG + 
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217

Query: 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
           F   +       +  +                          D+ +           +  
Sbjct: 218 FL-GDT--KQETLANIT---------------------AVSYDFDEEF---------FS- 243

Query: 378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 432
                         A D I   + LL  +  +RL  +EALRHP+ T    +  ++
Sbjct: 244 ---------QTSELAKDFI---RKLLVKETRKRLTIQEALRHPWITPVDTQQAMV 286

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  135 bits (342), Expect = 5e-36
 Identities = 61/360 (16%), Positives = 115/360 (31%), Gaps = 79/360 (21%)

Query: 78  KDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA 135
              ++++ + + L          G+G    V      +  +L AIK+    S  +  +  
Sbjct: 5   STSNHLWLLSDIL----------GQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ 54

Query: 136 MIEIDVLQRLARHD-IGGTRCVQIRNWFDYRN--HICIVFEKL-GPSLYDFLRKN-SYRS 190
           M E +VL++L  H  I     V++    +     H  ++ E     SLY  L +  +   
Sbjct: 55  MREFEVLKKL-NHKNI-----VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG 108

Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250
            P      + R ++  +  + E  ++H ++KP NI+ V  E                   
Sbjct: 109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE------------------- 149

Query: 251 FKNLPKSSAIKLIDFG-STTFEHQDHSY-VVSTRHYRAPEVILGLGWNYP--------CD 300
                  S  KL DFG +   E  +    +  T  Y  P++                  D
Sbjct: 150 ----DGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVD 205

Query: 301 LWSVGCILVELCSGEALFQTHENLEHLA-MMERVLGPLPHHMVIRADRRAEKYFRRGARL 359
           LWS+G       +G   F+  E       +M +++   P   +      +         +
Sbjct: 206 LWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAI------SGVQKAENGPI 259

Query: 360 DWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH 419
           DW        S+    ++L                L  +L  +L  D  +     +    
Sbjct: 260 DWSGDMPVSCSLSRGLQVL----------------LTPVLANILEADQEKCWGFDQFFAE 303

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  135 bits (341), Expect = 5e-36
 Identities = 87/360 (24%), Positives = 144/360 (40%), Gaps = 52/360 (14%)

Query: 74  RPDDKDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           R    +  Y   IG++   +  R + L  +G G  G V   +D   +  VAIK + R   
Sbjct: 4   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 63

Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ +++ +  H   IG       +   +    + IV E +  +L   ++ 
Sbjct: 64  NQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM 122

Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                     +  L  Q+L  +  +H   +IH DLKP NI++ S                
Sbjct: 123 ELDHER----MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---------------- 162

Query: 246 KDGSYFKNLPKSSAIKLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLW 302
                         +K++DFG   +         YVV TR+YRAPEVILG+G+    D+W
Sbjct: 163 -----------DCTLKILDFGLARTAGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIW 210

Query: 303 SVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWP 362
           SVGCI+ E+  G  LF   ++++    +   LG      + +       Y     +    
Sbjct: 211 SVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK---- 266

Query: 363 DGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
               +  S   ++  +  P    +H    A    DLL  +L  D ++R+   EAL+HP+ 
Sbjct: 267 ---YAGYSFEKLFPDVLFPADS-EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  138 bits (349), Expect = 1e-35
 Identities = 73/363 (20%), Positives = 117/363 (32%), Gaps = 71/363 (19%)

Query: 69  GSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR-- 126
           G  P  P    G +            ++  ++G G FG V+     +  E VAIK  R  
Sbjct: 3   GRSPSLPTQTCGPW------------EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE 50

Query: 127 SINKYREAAMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFL 183
              K RE   +EI ++++L  H   +               +   +  E   G  L  +L
Sbjct: 51  LSPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL 109

Query: 184 RKNSYRS-FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242
            +           +R L   +  ++ ++HE R+IH DLKPENI+L               
Sbjct: 110 NQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGP----------- 158

Query: 243 RSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCD 300
                        +    K+ID G +   +  +  +  V T  Y APE++    +    D
Sbjct: 159 -------------QRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVD 205

Query: 301 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 360
            WS G +  E  +G   F  +              P+  H  +R     EK        D
Sbjct: 206 YWSFGTLAFECITGFRPFLPNWQ------------PVQWHGKVR-----EKSNEHIVVYD 248

Query: 361 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 420
              GA    S+      L                    LQ +L +   +R    +     
Sbjct: 249 DLTGAVKFSSVLPTPNHLSGILAGKLE---------RWLQCMLMWHQRQRGTDPQNPNVG 299

Query: 421 FFT 423
            F 
Sbjct: 300 CFQ 302

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  134 bits (339), Expect = 1e-35
 Identities = 90/356 (25%), Positives = 140/356 (39%), Gaps = 68/356 (19%)

Query: 81  HYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--E 138
             V     ++ PR   LS +GEG +G V   +DN  K  VAIK +              E
Sbjct: 16  EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE 75

Query: 139 IDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE 198
           I +L R    +I G   +      +    + IV + +   LY  L+         D +  
Sbjct: 76  IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICY 132

Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
              Q+L  + ++H   ++H DLKP N+LL +                           + 
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNT---------------------------TC 165

Query: 259 AIKLIDFG--STTFEHQDHS-----YVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVE 310
            +K+ DFG         DH+     YV  TR YRAPE++L   G+    D+WSVGCIL E
Sbjct: 166 DLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224

Query: 311 LCSGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFR---RGARLDWPDGAT 366
           + S   +F     L+ L  +  +LG P    +    + +A  Y        ++ W     
Sbjct: 225 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR--- 281

Query: 367 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                         PN      D  A   +DLL  +L ++P +R++  +AL HP+ 
Sbjct: 282 ------------LFPN-----ADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYL 317

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  133 bits (337), Expect = 2e-35
 Identities = 89/359 (24%), Positives = 143/359 (39%), Gaps = 70/359 (19%)

Query: 78  KDGHYVFAIGENL---TPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYRE 133
           K G Y   + +            + +G G +G V    D    E VAIK + R       
Sbjct: 7   KKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIF 66

Query: 134 A--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYR 189
           A  A  E+ +L+ + +H+  IG        +         +V   +   L   +      
Sbjct: 67  AKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK--- 122

Query: 190 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249
            F  + ++ L  Q+L+ + ++H   ++H DLKP N+ +                      
Sbjct: 123 -FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE-------------------- 161

Query: 250 YFKNLPKSSAIKLIDFG-STTFEHQDHSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCI 307
                     +K++DFG +   + +   YVV TR YRAPEVIL     N   D+WSVGCI
Sbjct: 162 -------DCELKILDFGLARHADAEMTGYVV-TRWYRAPEVILSWMHYNQTVDIWSVGCI 213

Query: 308 LVELCSGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFR---RGARLDWPD 363
           + E+ +G+ LF+  + L+ L  + +V G P    +    D+ A+ Y +   +  R D+  
Sbjct: 214 MAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQ 273

Query: 364 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                            P          A    DLL+ +L  D  +RL A +AL HPFF
Sbjct: 274 ---------------LFPR-----ASPQA---ADLLEKMLELDVDKRLTAAQALTHPFF 309

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  133 bits (337), Expect = 2e-35
 Identities = 89/363 (24%), Positives = 146/363 (40%), Gaps = 69/363 (19%)

Query: 74  RPDDKDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
            P  + G Y   + +    +    + L  +G G +G V    D      VAIK + R   
Sbjct: 4   PPPARSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ 63

Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ +L+ + RH+  IG           D      +V   +G  L   ++ 
Sbjct: 64  SELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH 122

Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   D ++ L  Q+L+ + ++H   +IH DLKP N+ +                  
Sbjct: 123 EKLGE---DRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNE---------------- 163

Query: 246 KDGSYFKNLPKSSAIKLIDFG-STTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWS 303
                         +K++DFG +   + +   YVV TR YRAPEVIL    +    D+WS
Sbjct: 164 -----------DCELKILDFGLARQADSEMTGYVV-TRWYRAPEVILNWMRYTQTVDIWS 211

Query: 304 VGCILVELCSGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFR---RGARL 359
           VGCI+ E+ +G+ LF+  ++L+ L  + +V G P    +       A+ Y +      + 
Sbjct: 212 VGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKK 271

Query: 360 DWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH 419
           D+                  L N         A   ++LL+ +L  D  +R+ A EAL H
Sbjct: 272 DFAS---------------ILTN-----ASPLA---VNLLEKMLVLDAEQRVTAGEALAH 308

Query: 420 PFF 422
           P+F
Sbjct: 309 PYF 311

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  132 bits (334), Expect = 4e-35
 Identities = 42/356 (11%), Positives = 80/356 (22%), Gaps = 100/356 (28%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVRS--------INKYREAAMIEIDVLQRLARHDIGG 152
             G    V    D E+ E  A+K+           + +  EA      +L          
Sbjct: 71  RVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDR 130

Query: 153 TRCVQIRNWFDYRNH-----------------ICIVFEKLGPSLYDFLRKNSYRS----- 190
            R +   +    ++                    ++       L        +       
Sbjct: 131 RRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGD 190

Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250
             I  +  L  QL+   A +    L+H    P+N+ +                   DG  
Sbjct: 191 EGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFI-----------------MPDGR- 232

Query: 251 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCIL 308
                    + L D  +                Y   E +      +    + W +G  +
Sbjct: 233 ---------LMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSI 283

Query: 309 VELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR 368
             +      F                       +  + +R          L +       
Sbjct: 284 YRVWCLFLPFGLVTP-----------------GIKGSWKRPSLRVPGTDSLAFGSCTPLP 326

Query: 369 DSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
           D ++                         L+   L +D   RL   EA+  P F +
Sbjct: 327 DFVK------------------------TLIGRFLNFDRRRRLLPLEAMETPEFLQ 358

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  132 bits (334), Expect = 4e-35
 Identities = 78/370 (21%), Positives = 131/370 (35%), Gaps = 79/370 (21%)

Query: 78  KDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA 134
           K    +  +      +     +   +  G++G V    D+E    VAIK V +       
Sbjct: 5   KGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEG-IPVAIKRVFNTVSDGRT 63

Query: 135 AMI------------EIDVLQRLARHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYD 181
             I            EI +L     H  I G R + +       + + +V E +   L  
Sbjct: 64  VNILSDSFLCKRVLREIRLLNHF-HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQ 122

Query: 182 FLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241
            +            ++     +L  +  +HE  ++H DL P NILL              
Sbjct: 123 VIHDQR-IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD------------ 169

Query: 242 SRSSKDGSYFKNLPKSSAIKLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGL-GWNY 297
                          ++ I + DF      T +     YV   R YRAPE+++   G+  
Sbjct: 170 ---------------NNDITICDFNLAREDTADANKTHYVT-HRWYRAPELVMQFKGFTK 213

Query: 298 PCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRG 356
             D+WS GC++ E+ + +ALF+       L  +  V+G P    +V+ +   A  Y R  
Sbjct: 214 LVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNS 273

Query: 357 ----ARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK 412
                   W                  +P       D  A   +DL+  +L ++P  R+ 
Sbjct: 274 LSNVPARAWTA---------------VVPT-----ADPVA---LDLIAKMLEFNPQRRIS 310

Query: 413 AREALRHPFF 422
             +ALRHP+F
Sbjct: 311 TEQALRHPYF 320

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  130 bits (329), Expect = 5e-35
 Identities = 61/353 (17%), Positives = 114/353 (32%), Gaps = 103/353 (29%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD-I 150
           ++L  +G G++G+  +       +++  K +   +     ++  + E+++L+ L +H  I
Sbjct: 9   EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPNI 67

Query: 151 GGTRCVQIRNWFDYR--NHICIVFEKL-GPSLYDFLR--KNSYRSFPIDLVRELGRQLLE 205
                V+  +    R    + IV E   G  L   +       +    + V  +  QL  
Sbjct: 68  -----VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122

Query: 206 SVAFMHELRL-----IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
           ++   H         +H DLKP N+ L                     +          +
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFL-----------------DGKQN----------V 155

Query: 261 KLIDFG-STTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 317
           KL DFG +    H        V T +Y +PE +  + +N   D+WS+GC+L ELC+    
Sbjct: 156 KLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215

Query: 318 FQTHENLEHLAM--MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
           F    + + LA    E     +P+                           S        
Sbjct: 216 FTA-FSQKELAGKIREGKFRRIPYRY-------------------------SD------- 242

Query: 376 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
                             +L +++  +L      R    E L +P        
Sbjct: 243 ------------------ELNEIITRMLNLKDYHRPSVEEILENPLILEHHHH 277

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  132 bits (335), Expect = 8e-35
 Identities = 84/346 (24%), Positives = 134/346 (38%), Gaps = 92/346 (26%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMI--EIDVLQRL 145
            +   +G G  G+V   F+ +  + VAI+I+        S  +   A  +  EI++L++L
Sbjct: 138 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL 197

Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
             H       ++I+N+FD      IV E + G  L+D +  N          +    Q+L
Sbjct: 198 -NHP----CIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQML 249

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
            +V ++HE  +IH DLKPEN+LL S E                        +   IK+ D
Sbjct: 250 LAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKITD 285

Query: 265 FGSTTFEHQDHSY--VVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQ 319
           FG +    +      +  T  Y APEV++ +   G+N   D WS+G IL    SG   F 
Sbjct: 286 FGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 345

Query: 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379
            H     +++ +++                        + ++            VW    
Sbjct: 346 EHRT--QVSLKDQIT---------------------SGKYNFIP---------EVWA--- 370

Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
                   V   A DL+     LL  DP  R    EALRHP+   +
Sbjct: 371 -------EVSEKALDLVK---KLLVVDPKARFTTEEALRHPWLQDE 406

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  131 bits (332), Expect = 1e-34
 Identities = 87/434 (20%), Positives = 143/434 (32%), Gaps = 112/434 (25%)

Query: 10  PHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTG 69
             +++    R++ R         P            +  N   P    +  F    P   
Sbjct: 25  EIRHLPNLNREQRRAFIRSLRDDPSQSANLLA--EAKKLNDAQPKGTENLYFQSMGPEDE 82

Query: 70  SPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV---- 125
            P W              +    +      +G G    V  C         A+KI+    
Sbjct: 83  LPDWAA-----------AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTA 131

Query: 126 -----RSINKYREAAMIEIDVLQRLARHD-IGGTRCVQIRNWFDYRNHICIVFEKL-GPS 178
                  + + REA   E  +L+++A H  I     + + + ++  + + +VF+ +    
Sbjct: 132 ERLSPEQLEEVREATRRETHILRQVAGHPHI-----ITLIDSYESSSFMFLVFDLMRKGE 186

Query: 179 LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           L+D+L +           R + R LLE+V+F+H   ++H DLKPENILL           
Sbjct: 187 LFDYLTEKVA--LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDD--------- 235

Query: 239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGL--- 293
                             +  I+L DFG +           +  T  Y APE++      
Sbjct: 236 ------------------NMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDE 277

Query: 294 ---GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAE 350
              G+    DLW+ G IL  L +G   F  H     + M+  ++                
Sbjct: 278 THPGYGKEVDLWACGVILFTLLAGSPPF-WHRR--QILMLRMIM---------------- 318

Query: 351 KYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER 410
                  +  +             W               +  DLI     LL+ DP  R
Sbjct: 319 -----EGQYQFSSP---------EWD----------DRSSTVKDLIS---RLLQVDPEAR 351

Query: 411 LKAREALRHPFFTR 424
           L A +AL+HPFF R
Sbjct: 352 LTAEQALQHPFFER 365

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  129 bits (327), Expect = 1e-34
 Identities = 82/384 (21%), Positives = 131/384 (34%), Gaps = 110/384 (28%)

Query: 67  RTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV- 125
           R  + P        +  +   E L          G G    V  C      +  A+KI+ 
Sbjct: 2   RDAALPGSHSTHGFYENYEPKEIL----------GRGVSSVVRRCIHKPTCKEYAVKIID 51

Query: 126 ---------RSINKYREAAMIEIDVLQRLARHD-IGGTRCVQIRNWFDYRNHICIVFEKL 175
                      + + REA + E+D+L++++ H  I     +Q+++ ++      +VF+ +
Sbjct: 52  VTGGGSFSAEEVQELREATLKEVDILRKVSGHPNI-----IQLKDTYETNTFFFLVFDLM 106

Query: 176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 234
               L+D+L +           R++ R LLE +  +H+L ++H DLKPENILL       
Sbjct: 107 KKGELFDYLTEKVT--LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDD----- 159

Query: 235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILG 292
                                    IKL DFG +           V  T  Y APE+I  
Sbjct: 160 ----------------------DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIEC 197

Query: 293 L------GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRAD 346
                  G+    D+WS G I+  L +G   F  H     + M+  ++            
Sbjct: 198 SMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF-WHRK--QMLMLRMIM------------ 242

Query: 347 RRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD 406
                 F      +W                             +  DL+      L   
Sbjct: 243 -SGNYQFGSP---EWD------------------------DYSDTVKDLVS---RFLVVQ 271

Query: 407 PAERLKAREALRHPFFTRDVRRPT 430
           P +R  A EAL HPFF + V    
Sbjct: 272 PQKRYTAEEALAHPFFQQYVVEEV 295

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  129 bits (327), Expect = 3e-34
 Identities = 67/336 (19%), Positives = 103/336 (30%), Gaps = 93/336 (27%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
               ++G G+FG+V    D +     A+K VR         + E+     L        R
Sbjct: 61  THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR----LEVFRVEELVACAGL-SSP----R 111

Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V +         + I  E L G SL   +++      P D       Q LE + ++H  
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTR 169

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG------- 266
           R++H D+K +N+LL                 S DGS            L DFG       
Sbjct: 170 RILHGDVKADNVLL-----------------SSDGS---------RAALCDFGHALCLQP 203

Query: 267 -STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
                      Y+  T  + APEV++G   +   D+WS  C+++ + +G           
Sbjct: 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC---------- 253

Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
                       P                      W              K+   P  I 
Sbjct: 254 ----------H-P----------------------WTQ----YFRGPLCLKIASEPPPIR 276

Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
           +     A      +Q  LR +P  R  A E  R   
Sbjct: 277 EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVG 312

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  130 bits (328), Expect = 4e-34
 Identities = 81/350 (23%), Positives = 146/350 (41%), Gaps = 76/350 (21%)

Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--------YREAAMIEID 140
            +  R + LS +G G +G V   FD +    VA+K +    +        YRE     + 
Sbjct: 26  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LR 80

Query: 141 VLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE 198
           +L+ + +H+  IG           +  N + +V   +G  L + ++         D V+ 
Sbjct: 81  LLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQF 136

Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
           L  Q+L  + ++H   +IH DLKP N+ +                               
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNE---------------------------DC 169

Query: 259 AIKLIDFG-STTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 316
            +K++DFG +     +   YV  TR YRAPE++L    +N   D+WSVGCI+ EL +G  
Sbjct: 170 ELKILDFGLARHTADEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228

Query: 317 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFR---RGARLDWPDGATSRDSMR 372
           LF   ++++ L ++ R++G P    +   +   A  Y +   +  ++++ +         
Sbjct: 229 LFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFAN--------- 279

Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                           +  A   +DLL+ +L  D  +R+ A +AL H +F
Sbjct: 280 ------VFIG-----ANPLA---VDLLEKMLVLDSDKRITAAQALAHAYF 315

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  128 bits (325), Expect = 4e-34
 Identities = 90/361 (24%), Positives = 139/361 (38%), Gaps = 94/361 (26%)

Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMI-----E 138
           + L     +   +G G  G+V   F+ +  + VAIKI+     +I   REA        E
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65

Query: 139 IDVLQRLARH-DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLV 196
           I++L++L  H  I     ++I+N+FD  ++  IV E + G  L+D +  N          
Sbjct: 66  IEILKKL-NHPCI-----IKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKR--LKEATC 116

Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
           +    Q+L +V ++HE  +IH DLKPEN+LL S E                        +
Sbjct: 117 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE------------------------E 152

Query: 257 SSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVEL 311
              IK+ DFG +    +      +  T  Y APEV++ +   G+N   D WS+G IL   
Sbjct: 153 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212

Query: 312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM 371
            SG   F  H     L   +++                        + ++          
Sbjct: 213 LSGYPPFSEHRTQVSL--KDQIT---------------------SGKYNFIP-------- 241

Query: 372 RAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
             VW            V   A DL+     LL  DP  R    EALRHP+   +  +   
Sbjct: 242 -EVWA----------EVSEKALDLVK---KLLVVDPKARFTTEEALRHPWLQDEDMKRKF 287

Query: 432 L 432
            
Sbjct: 288 Q 288

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  129 bits (327), Expect = 6e-34
 Identities = 79/335 (23%), Positives = 126/335 (37%), Gaps = 81/335 (24%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           G G FGQV +C +      +A KI++    K +E    EI V+ +L  H       +Q+ 
Sbjct: 98  GGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-DHA----NLIQLY 152

Query: 160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           + F+ +N I +V E + G  L+D +   SY +          +Q+ E +  MH++ ++H 
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESY-NLTELDTILFMKQICEGIRHMHQMYILHL 211

Query: 219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY- 277
           DLKPENIL V+                           +  IK+IDFG            
Sbjct: 212 DLKPENILCVN-------------------------RDAKQIKIIDFGLARRYKPREKLK 246

Query: 278 -VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP 336
               T  + APEV+     ++P D+WSVG I   L SG + F    + E    +  +L  
Sbjct: 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE---TLNNIL-- 301

Query: 337 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI 396
                                  ++ D                        +   A + I
Sbjct: 302 -----------ACRWDLEDE---EFQD------------------------ISEEAKEFI 323

Query: 397 DLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
                LL  + + R+ A EAL+HP+ +       L
Sbjct: 324 ---SKLLIKEKSWRISASEALKHPWLSDHKLHSRL 355

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  127 bits (321), Expect = 9e-34
 Identities = 67/338 (19%), Positives = 123/338 (36%), Gaps = 102/338 (30%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-IGGTRCVQ 157
            +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++   I     V+
Sbjct: 25  VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHI-----VR 75

Query: 158 IRNWFD----YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
           I + ++     R  + IV E L G  L+  ++    ++F      E+ + + E++ ++H 
Sbjct: 76  IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
           + + H D+KPEN+L  S                           ++ +KL DFG      
Sbjct: 136 INIAHRDVKPENLLYTSKR------------------------PNAILKLTDFG------ 165

Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ-THENLEHLAMME 331
                        A E   G  ++  CD+WS+G I+  L  G   F   H       M  
Sbjct: 166 ------------FAKET-TGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 212

Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
           R+                +  F      +W                          V   
Sbjct: 213 RIR-------------MGQYEFPNP---EWS------------------------EVSEE 232

Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
              LI   + LL+ +P +R+   E + HP+  +  + P
Sbjct: 233 VKMLI---RNLLKTEPTQRMTITEFMNHPWIMQSTKVP 267

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score =  129 bits (325), Expect = 2e-33
 Identities = 85/372 (22%), Positives = 143/372 (38%), Gaps = 67/372 (18%)

Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI--EIDVLQRL 145
           ++     I   +G G++G V   +D   ++ VAIK + R      +   I  EI +L RL
Sbjct: 23  HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL 82

Query: 146 ARHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
            + D I     + I +     + + IV E     L    +   + +   + ++ +   LL
Sbjct: 83  -KSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLT--EEHIKTILYNLL 139

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLI 263
               F+HE  +IH DLKP N LL     VKV D  F L+R+         +      +  
Sbjct: 140 LGENFIHESGIIHRDLKPANCLLNQDCSVKVCD--FGLARTINSEKDTNIVNDLEENEEP 197

Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSG-------- 314
              +   + Q  S+VV TR YRAPE+IL    +    D+WS GCI  EL +         
Sbjct: 198 GPHNKNLKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDP 256

Query: 315 ---EALFQ-----------------THENLEHLAMMERVLG-PLPHHMVIRADRRAEKYF 353
                LF                     N + L ++  ++G P    +         KY 
Sbjct: 257 TNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYI 316

Query: 354 R---RGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAER 410
           +       ++                  + P+     +       I+LL+ +L+++P +R
Sbjct: 317 KLFPHRKPINLKQ---------------KYPS-----ISDDG---INLLESMLKFNPNKR 353

Query: 411 LKAREALRHPFF 422
           +   +AL HP+ 
Sbjct: 354 ITIDQALDHPYL 365

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  124 bits (313), Expect = 2e-32
 Identities = 63/358 (17%), Positives = 108/358 (30%), Gaps = 108/358 (30%)

Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-REAAMIEIDVLQRLARHD-I 150
               + K+GEG F  V            A+K +    +  RE A  E D+ +    H  I
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF-NHPNI 88

Query: 151 GGTRCVQIRNWF----DYRNHICIVFE--KLGPSLYDFL--RKNSYRSFPIDLVRELGRQ 202
                +++  +       ++   ++    K G +L++ +   K+       D +  L   
Sbjct: 89  -----LRLVAYCLRERGAKHEAWLLLPFFKRG-TLWNEIERLKDKGNFLTEDQILWLLLG 142

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           +   +  +H     H DLKP NILL                   +G             L
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILL-----------------GDEGQP----------VL 175

Query: 263 IDFGSTTFEH------------QDHSYVVSTRHYRAPEVI---LGLGWNYPCDLWSVGCI 307
           +D GS                 QD +    T  YRAPE+         +   D+WS+GC+
Sbjct: 176 MDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCV 235

Query: 308 LVELCSGEALFQ-THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGAT 366
           L  +  GE  +    +  + +A            + ++                 P    
Sbjct: 236 LYAMMFGEGPYDMVFQKGDSVA------------LAVQNQLS------------IPQSPR 271

Query: 367 SRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
                                  HS+  L  LL  ++  DP +R      L      +
Sbjct: 272 -----------------------HSS-ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  123 bits (310), Expect = 2e-32
 Identities = 71/344 (20%), Positives = 131/344 (38%), Gaps = 92/344 (26%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH-D 149
           +I   +G+G FG V    + + K ++A+K++    + K      +  E+++   L RH +
Sbjct: 12  EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPN 70

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     +++  +F     + ++ E     ++Y  L+K     F          +L  +++
Sbjct: 71  I-----LRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALS 123

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-S 267
           + H  R+IH D+KPEN+LL                    G           +K+ DFG S
Sbjct: 124 YCHSKRVIHRDIKPENLLL-----------------GSAGE----------LKIADFGWS 156

Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                   + +  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +    + 
Sbjct: 157 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---TYQ 213

Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
              +R+          R +     +   GAR                             
Sbjct: 214 ETYKRIS---------RVEFTFPDFVTEGAR----------------------------- 235

Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
                    DL+  LL+++P++R   RE L HP+ T +  +P+ 
Sbjct: 236 ---------DLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 270

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  122 bits (309), Expect = 4e-32
 Identities = 77/340 (22%), Positives = 125/340 (36%), Gaps = 94/340 (27%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH-DIGGTRC 155
           G+G F +  E  D + KE+ A KIV    + K  +   +  EI + + L  H  +     
Sbjct: 24  GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHV----- 77

Query: 156 VQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V    +F+  + + +V E     SL +  ++   ++      R   RQ++    ++H  R
Sbjct: 78  VGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNR 135

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQ 273
           +IH DLK  N+ L                 ++D            +K+ DFG +T  E+ 
Sbjct: 136 VIHRDLKLGNLFL-----------------NEDLE----------VKIGDFGLATKVEYD 168

Query: 274 DHSYVVS--TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
                V   T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T   L+      
Sbjct: 169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET-SCLK--ETYL 225

Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
           R+                     +      P                        H++  
Sbjct: 226 RI---------------------KKNEYSIPK-----------------------HINPV 241

Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
           A  LI   Q +L+ DP  R    E L   FFT       L
Sbjct: 242 AASLI---QKMLQTDPTARPTINELLNDEFFTSGYIPARL 278

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  122 bits (308), Expect = 6e-32
 Identities = 65/346 (18%), Positives = 107/346 (30%), Gaps = 84/346 (24%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD--- 149
           + +  +G G FG V E  +       AIK +R  +    RE  M E+  L +L  H    
Sbjct: 8   EPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPGIV 66

Query: 150 -----IGGTRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFP-IDLVRELGR 201
                       +       + ++ I  + L    +L D++            +   +  
Sbjct: 67  RYFNAWLEKNTTEKLQPSSPKVYLYIQMQ-LCRKENLKDWMNGRCTIEERERSVCLHIFL 125

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAI 260
           Q+ E+V F+H   L+H DLKP NI     + VKV D  F L  +       + +      
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGD--FGLVTAMDQDEEEQTVLTPMP- 182

Query: 261 KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320
                      +  H+  V T+ Y +PE I G  +++  D++S+G IL EL      F T
Sbjct: 183 ----------AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYP---FST 229

Query: 321 HENLEHLAM--MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
                            PL                                         
Sbjct: 230 QMERVRTLTDVRNLKFPPLFTQ-------------------------KYPC--------- 255

Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
               ++                 +L   P ER +A   + +  F  
Sbjct: 256 -EYVMVQD---------------MLSPSPMERPEAINIIENAVFED 285

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  121 bits (307), Expect = 7e-32
 Identities = 66/334 (19%), Positives = 125/334 (37%), Gaps = 93/334 (27%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH-DIGGTRC 155
           G+G+F  V           VAIK++  +++ K      +  E+ +  +L +H  I     
Sbjct: 20  GKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSI----- 73

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           +++ N+F+  N++ +V E      +  +L+    + F  +  R    Q++  + ++H   
Sbjct: 74  LELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSHG 132

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQ 273
           ++H DL   N+LL                 +++ +          IK+ DFG +T  +  
Sbjct: 133 ILHRDLTLSNLLL-----------------TRNMN----------IKIADFGLATQLKMP 165

Query: 274 DHSYVVS--TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
              +     T +Y +PE+          D+WS+GC+   L  G   F T + +++     
Sbjct: 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT-DTVKNT---- 220

Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
                                  +    D                   +P+     +   
Sbjct: 221 ---------------------LNKVVLAD-----------------YEMPS----FLSIE 238

Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
           A DLI     LLR +PA+RL     L HPF +R+
Sbjct: 239 AKDLI---HQLLRRNPADRLSLSSVLDHPFMSRN 269

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  122 bits (309), Expect = 9e-32
 Identities = 90/412 (21%), Positives = 141/412 (34%), Gaps = 118/412 (28%)

Query: 29  PPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGE 88
           P P  P K              G+P  A       A P    P    D +     +  G 
Sbjct: 2   PAPADPGK-------------AGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRRR-YVRGR 47

Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQR 144
            L          G+G F +  E  D + KE+ A KIV    + K  +   +  EI + + 
Sbjct: 48  FL----------GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS 97

Query: 145 LARH-DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           L  H  +     V    +F+  + + +V E     SL +  ++   ++      R   RQ
Sbjct: 98  L-AHQHV-----VGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQ 149

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           ++    ++H  R+IH DLK  N+ L                 ++D            +K+
Sbjct: 150 IVLGCQYLHRNRVIHRDLKLGNLFL-----------------NEDLE----------VKI 182

Query: 263 IDFG-STTFEHQDHSYVVS--TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
            DFG +T  E+      V   T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+
Sbjct: 183 GDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242

Query: 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379
           T   L+      R+                     +      P                 
Sbjct: 243 T-SCLK--ETYLRI---------------------KKNEYSIPK---------------- 262

Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
                  H++  A  LI   Q +L+ DP  R    E L   FFT       L
Sbjct: 263 -------HINPVAASLI---QKMLQTDPTARPTINELLNDEFFTSGYIPARL 304

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  120 bits (302), Expect = 4e-31
 Identities = 67/340 (19%), Positives = 124/340 (36%), Gaps = 88/340 (25%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           G+GT+G V    D   +  +AIK +   +  Y +    EI + + L +H       VQ  
Sbjct: 31  GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL-KHK----NIVQYL 85

Query: 160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVAFMHELRLI 216
             F     I I  E++ G SL   L ++ +     +   +    +Q+LE + ++H+ +++
Sbjct: 86  GSFSENGFIKIFMEQVPGGSLSALL-RSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144

Query: 217 HTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS---TTFEHQ 273
           H D+K +N+L+                ++  G           +K+ DFG+       + 
Sbjct: 145 HRDIKGDNVLI----------------NTYSGV----------LKISDFGTSKRLAGINP 178

Query: 274 DHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
                  T  Y APE+I     G+    D+WS+GC ++E+ +G+  F  +E  E  A M 
Sbjct: 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF--YELGEPQAAM- 235

Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
                                F+ G     P+                +P       +  
Sbjct: 236 ---------------------FKVGMFKVHPE----------------IP-------ESM 251

Query: 392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
           + +    +      DP +R  A + L   F     ++   
Sbjct: 252 SAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKKT 291

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  118 bits (298), Expect = 1e-30
 Identities = 62/342 (18%), Positives = 126/342 (36%), Gaps = 92/342 (26%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIG 151
           K   ++G G+F  V +  D E    VA   ++        R+    E ++L+ L +H   
Sbjct: 29  KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-QHP-- 85

Query: 152 GTRCVQ-IRNWFDY---RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
               V+   +W      +  I +V E +   +L  +L++  ++   I ++R   RQ+L+ 
Sbjct: 86  --NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKG 141

Query: 207 VAFMHE--LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
           + F+H     +IH DLK +NI +                +   GS          +K+ D
Sbjct: 142 LQFLHTRTPPIIHRDLKCDNIFI----------------TGPTGS----------VKIGD 175

Query: 265 FGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323
            G  T +    +  V+ T  + APE+     ++   D+++ G  ++E+ + E  +   +N
Sbjct: 176 LGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN 234

Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
                +  RV   +                                           P  
Sbjct: 235 AA--QIYRRVTSGVK------------------------------------------PAS 250

Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
             +       ++ ++++G +R +  ER   ++ L H FF  +
Sbjct: 251 FDKVAIP---EVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  116 bits (294), Expect = 4e-30
 Identities = 78/372 (20%), Positives = 130/372 (34%), Gaps = 108/372 (29%)

Query: 64  AIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIK 123
           A+       +  DD      F IG  L          G+G FG V    + + K ++A+K
Sbjct: 2   ALAEMPKRKFTIDD------FDIGRPL----------GKGKFGNVYLAREKQNKFIMALK 45

Query: 124 IV--RSINKYREAAMI--EIDVLQRLARH-DIGGTRCVQIRNWFDYRNHICIVFE-KLGP 177
           ++    + K      +  EI++   L RH +I     +++ N+F  R  I ++ E     
Sbjct: 46  VLFKSQLEKEGVEHQLRREIEIQSHL-RHPNI-----LRMYNYFHDRKRIYLMLEFAPRG 99

Query: 178 SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            LY  L+K+    F          +L +++ + HE ++IH D+KPEN+L+          
Sbjct: 100 ELYKELQKH--GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE----- 152

Query: 238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEHQDHSYVVSTRHYRAPEVILGLGWN 296
                                 +K+ DFG S          +  T  Y  PE+I G   +
Sbjct: 153 ----------------------LKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHD 190

Query: 297 YPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRG 356
              DLW  G +  E   G   F +     H     R++           D +   +   G
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSP---SHTETHRRIV---------NVDLKFPPFLSDG 238

Query: 357 ARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREA 416
           ++                                      DL+  LLRY P +RL  +  
Sbjct: 239 SK--------------------------------------DLISKLLRYHPPQRLPLKGV 260

Query: 417 LRHPFFTRDVRR 428
           + HP+   + RR
Sbjct: 261 MEHPWVKANSRR 272

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  117 bits (295), Expect = 8e-30
 Identities = 65/268 (24%), Positives = 98/268 (36%), Gaps = 56/268 (20%)

Query: 83  VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDV 141
              +GE    R ++   + EG F  V E  D       A+K + S  +    A + E+  
Sbjct: 22  TVELGEL---RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCF 78

Query: 142 LQRLARHD----IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYR-SFPIDLV 196
           +++L+ H           +        +    ++ E     L +FL+K   R     D V
Sbjct: 79  MKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTV 138

Query: 197 RELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254
            ++  Q   +V  MH  +  +IH DLK EN+LL                 S  G+     
Sbjct: 139 LKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL-----------------SNQGTI---- 177

Query: 255 PKSSAIKLIDFGSTTFEHQDHSYVVS-----------TRH----YRAPEVI---LGLGWN 296
                 KL DFGS T       Y  S           TR+    YR PE+I         
Sbjct: 178 ------KLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIG 231

Query: 297 YPCDLWSVGCILVELCSGEALFQTHENL 324
              D+W++GCIL  LC  +  F+    L
Sbjct: 232 EKQDIWALGCILYLLCFRQHPFEDGAKL 259

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  115 bits (288), Expect = 1e-28
 Identities = 45/366 (12%), Positives = 96/366 (26%), Gaps = 124/366 (33%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVRSINKY---------REAAMIEIDVLQRLARHDIG 151
           G+      +E  D E  E   + +     +           E   + +    +  +    
Sbjct: 82  GQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKV 141

Query: 152 GTRCVQIRNWFDYRNH-----------------ICIVFEKLGPSLYDFL-----RKNSYR 189
             R +   +                           ++ ++  +L  F        ++++
Sbjct: 142 HLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHK 201

Query: 190 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249
           S       +L  Q++  +A +H   L+HT L+P +I+L                  + G 
Sbjct: 202 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL-----------------DQRGG 244

Query: 250 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW-----------NYP 298
                     + L  F     +         +R +  PE+                  + 
Sbjct: 245 ----------VFLTGFEHLVRDGARVV-SSVSRGFEPPELEARRATISYHRDRRTLMTFS 293

Query: 299 CDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGAR 358
            D W++G ++  +   +    T +                          +E  FR    
Sbjct: 294 FDAWALGLVIYWIWCADLPI-TKDAALGG---------------------SEWIFRS--C 329

Query: 359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
            + P                                   LL+G LRY   +RL   +A+ 
Sbjct: 330 KNIPQPV------------------------------RALLEGFLRYPKEDRLLPLQAME 359

Query: 419 HPFFTR 424
            P + +
Sbjct: 360 TPEYEQ 365

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  113 bits (283), Expect = 2e-28
 Identities = 55/300 (18%), Positives = 100/300 (33%), Gaps = 72/300 (24%)

Query: 127 SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRK 185
           S     +A  ++I  +   +  +      V        + ++ I  +     +L D++ +
Sbjct: 100 SSPSPMDAPSVKIRRMDPFSTKNT-----VGQLQPSSPKVYLYIQMQLCRKENLKDWMNR 154

Query: 186 NSYRSFP-IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSR 243
                     +   +  Q+ E+V F+H   L+H DLKP NI     + VKV D  F L  
Sbjct: 155 RCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGD--FGLVT 212

Query: 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWS 303
           +       + +            +    +  H+  V T+ Y +PE I G  +++  D++S
Sbjct: 213 AMDQDEEEQTVL-----------TPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFS 261

Query: 304 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD 363
           +G IL EL      F T         MERV                              
Sbjct: 262 LGLILFELLYS---FSTQ--------MERVR----------------------------- 281

Query: 364 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                     +   +R     +            ++Q +L   P ER +A + + +  F 
Sbjct: 282 ----------IITDVRNLKFPLLFTQKYP-QEHMMVQDMLSPSPTERPEATDIIENAIFE 330

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  113 bits (284), Expect = 3e-28
 Identities = 59/364 (16%), Positives = 121/364 (33%), Gaps = 93/364 (25%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--------------- 137
           +I+  + +G F +++ C   +  +  A+K      + K R+                   
Sbjct: 34  RIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFK 91

Query: 138 -EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSY------R 189
            E+ ++  + +++     C+         + + I++E +   S+  F             
Sbjct: 92  NELQIITDI-KNE----YCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146

Query: 190 SFPIDLVRELGRQLLESVAFMHELRLI-HTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
             PI +++ + + +L S +++H  + I H D+KP NIL+                  K+G
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM-----------------DKNG 189

Query: 249 SYFKNLPKSSAIKLIDFG-STTFEHQDHSYVVSTRHYRAPEVILGLGW--NYPCDLWSVG 305
                      +KL DFG S     +       T  +  PE             D+WS+G
Sbjct: 190 R----------VKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLG 239

Query: 306 CILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA 365
             L  +      F    +L  + +   +                         +++P   
Sbjct: 240 ICLYVMFYNVVPFSLKISL--VELFNNIR---------------------TKNIEYPLDR 276

Query: 366 TSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
                     K            +  + + ID L+  LR +PAER+ + +AL+H +    
Sbjct: 277 NHFLYPLTNKKSTCSN-------NFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT 329

Query: 426 VRRP 429
               
Sbjct: 330 NIED 333

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  112 bits (283), Expect = 3e-28
 Identities = 58/235 (24%), Positives = 96/235 (40%), Gaps = 48/235 (20%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI-----EIDVLQRLAR 147
           ++   +G G FG V           VAIK V    I+ + E         E+ +L+++  
Sbjct: 46  QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV-S 104

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPS--LYDFLRKNSYRSFPIDLVRELGRQLLE 205
               G   +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R    Q+LE
Sbjct: 105 SGFSG--VIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLE 160

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           +V   H   ++H D+K ENIL+         D                      +KLIDF
Sbjct: 161 AVRHCHNCGVLHRDIKDENILI---------DLNRGE-----------------LKLIDF 194

Query: 266 GSTTFEHQDHSYVVS--TRHYRAPEVILGLGWNY---PCDLWSVGCILVELCSGE 315
           GS     +D  Y     TR Y  PE I      Y      +WS+G +L ++  G+
Sbjct: 195 GSGAL-LKDTVYTDFDGTRVYSPPEWIRYHR--YHGRSAAVWSLGILLYDMVCGD 246

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  109 bits (273), Expect = 1e-26
 Identities = 69/337 (20%), Positives = 118/337 (35%), Gaps = 51/337 (15%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDIGGT 153
            +S++G G  G V +        ++A K++    K      I  E+ VL       I   
Sbjct: 37  KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI--V 94

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH- 211
                   F     I I  E + G SL   L+K      P  ++ ++   +++ + ++  
Sbjct: 95  GFYGA---FYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLRE 149

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTF 270
           + +++H D+KP NIL+                 +  G           IKL DFG S   
Sbjct: 150 KHKIMHRDVKPSNILV-----------------NSRGE----------IKLCDFGVSGQL 182

Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
                +  V TR Y +PE + G  ++   D+WS+G  LVE+  G       +  E   M 
Sbjct: 183 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF 242

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL-RLPNLIMQHVD 389
              +         R                            A+++LL  + N     + 
Sbjct: 243 GCQVEGDAAETPPRPRTPGRP---------LNKFGMDSRPPMAIFELLDYIVNEPPPKLP 293

Query: 390 HSA--GDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
                 +  D +   L  +PAER   ++ + H F  R
Sbjct: 294 SGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 330

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  107 bits (270), Expect = 1e-26
 Identities = 56/260 (21%), Positives = 98/260 (37%), Gaps = 46/260 (17%)

Query: 70  SPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV--RS 127
            PP  P            E      ++   +G+G FG V        +  VAIK++    
Sbjct: 9   GPPAPPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNR 68

Query: 128 INKYREAAMI-----EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS--LY 180
           +  +   +       E+ +L ++     G    +++ +WF+ +    +V E+  P+  L+
Sbjct: 69  VLGWSPLSDSVTCPLEVALLWKV-GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLF 127

Query: 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240
           D++ +           R    Q++ ++   H   ++H D+K ENIL+             
Sbjct: 128 DYITEKGP--LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILI------------- 172

Query: 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS--TRHYRAPEVILGLGWNY- 297
                + G            KLIDFGS      D  Y     TR Y  PE I      Y 
Sbjct: 173 ---DLRRGC----------AKLIDFGSGAL-LHDEPYTDFDGTRVYSPPEWISRHQ--YH 216

Query: 298 --PCDLWSVGCILVELCSGE 315
             P  +WS+G +L ++  G+
Sbjct: 217 ALPATVWSLGILLYDMVCGD 236

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  105 bits (265), Expect = 1e-25
 Identities = 79/358 (22%), Positives = 126/358 (35%), Gaps = 116/358 (32%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR--EAAMI----------EIDVL 142
             +S +G G FG V    D EK + V +K    I K +  E   I          EI +L
Sbjct: 27  STMSPLGSGAFGFVWTAVDKEKNKEVVVKF---IKKEKVLEDCWIEDPKLGKVTLEIAIL 83

Query: 143 QRLARH-DIGGTRCVQIRNWFDYRNHICIVFEKLGPS--LYDFLRKNSYRSFPIDLVREL 199
            R+  H +I     +++ + F+ +    +V EK G    L+ F+ ++        L   +
Sbjct: 84  SRV-EHANI-----IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYI 135

Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            RQL+ +V ++    +IH D+K ENI++            F                   
Sbjct: 136 FRQLVSAVGYLRLKDIIHRDIKDENIVI---------AEDF------------------T 168

Query: 260 IKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEA 316
           IKLIDFGS  +  +         T  Y APEV++G  +  P  ++WS+G  L  L   E 
Sbjct: 169 IKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEEN 228

Query: 317 LFQTHENLEHLAMMERVLGPL--PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
            F   E        E V   +  P+ +                         S++ M   
Sbjct: 229 PFCELE--------ETVEAAIHPPYLV-------------------------SKELMS-- 253

Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 432
                                  L+ GLL+  P  R    + +  P+ T+ V      
Sbjct: 254 -----------------------LVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYT 288

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  105 bits (263), Expect = 4e-25
 Identities = 43/364 (11%), Positives = 92/364 (25%), Gaps = 121/364 (33%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVRSINK---------YREAAMIEIDVLQRLARHDIG 151
           G+      +E  D E  E   + +     +           E   + +    +  +    
Sbjct: 87  GQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKV 146

Query: 152 GTRCVQIRNWFDYRNH-----------------ICIVFEKLGPSLYDFL-----RKNSYR 189
             R +   +                           ++ ++  +L  F        ++++
Sbjct: 147 HLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHK 206

Query: 190 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249
           S       +L  Q++  +A +H   L+HT L+P +I+L                  + G 
Sbjct: 207 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL-----------------DQRGG 249

Query: 250 YFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLG-----WNYPCD 300
                     + L  F     +            +     A  ++           +  D
Sbjct: 250 ----------VFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFD 299

Query: 301 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 360
            W++G  +  +                         LP                  A   
Sbjct: 300 TWTLGLAIYWI---------------------WCADLP--------------NTDDA--- 321

Query: 361 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 420
                            L     I +   +    +  LL+G LRY   +RL   +A+  P
Sbjct: 322 ----------------ALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETP 365

Query: 421 FFTR 424
            + +
Sbjct: 366 EYEQ 369

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  100 bits (251), Expect = 1e-23
 Identities = 83/372 (22%), Positives = 125/372 (33%), Gaps = 99/372 (26%)

Query: 66  PRTGSPPWRPDDKD-GHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKI 124
           P T  P   P   D   Y     +++          G G FG      D   KELVA+K 
Sbjct: 5   PVTTGPLDMPIMHDSDRYD--FVKDI----------GSGNFGVARLMRDKLTKELVAVKY 52

Query: 125 VRSINKYREAAMIEIDVLQRLARH-DIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDF 182
           +       E    EI    R  RH +I     V+ +       H+ I+ E   G  LY+ 
Sbjct: 53  IERGAAIDENVQREIINH-RSLRHPNI-----VRFKEVILTPTHLAIIMEYASGGELYER 106

Query: 183 LRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242
           +       F  D  R   +QLL  V++ H +++ H DLK EN LL               
Sbjct: 107 ICNA--GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLL--------------- 149

Query: 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYP-C 299
               DGS          +K+ DFG +            V T  Y APEV+L   ++    
Sbjct: 150 ----DGSPAPR------LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIA 199

Query: 300 DLWSVGCILVELCSGEALFQTHENLEHL--AMMERVLGPLPHHMVIRADRRAEKYFRRGA 357
           D+WS G  L  +  G   F+            ++R+L              + KY     
Sbjct: 200 DVWSCGVTLYVMLVGAYPFE-DPEEPRDYRKTIQRIL--------------SVKY----- 239

Query: 358 RLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL 417
                                 +P+ I       + +   L+  +   DPA R+   E  
Sbjct: 240 ---------------------SIPDDI-----RISPECCHLISRIFVADPATRISIPEIK 273

Query: 418 RHPFFTRDVRRP 429
            H +F +++   
Sbjct: 274 THSWFLKNLPAD 285

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  100 bits (250), Expect = 1e-23
 Identities = 71/337 (21%), Positives = 126/337 (37%), Gaps = 93/337 (27%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH-DIGGTRC 155
           GEG+FG+V      + ++ VA+K +  + + K      +  EI  L +L RH  I     
Sbjct: 18  GEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYL-KLLRHPHI----- 71

Query: 156 VQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           +++ +       I +V E  G  L+D++ +   +    D  R   +Q++ ++ + H  ++
Sbjct: 72  IKLYDVITTPTDIVMVIEYAGGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHKI 129

Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           +H DLKPEN+LL         D               N      +K+ DFG +      +
Sbjct: 130 VHRDLKPENLLL---------DDN------------LN------VKIADFGLSNIMTDGN 162

Query: 276 SYVVS--TRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
               S  + +Y APEVI G  +  P  D+WS G +L  +  G   F   E + +L     
Sbjct: 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD-DEFIPNL----- 216

Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                    V         +   GA+                                  
Sbjct: 217 ------FKKVNSCVYVMPDFLSPGAQ---------------------------------- 236

Query: 393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
                L++ ++  DP +R+  +E  R P+F  ++   
Sbjct: 237 ----SLIRRMIVADPMQRITIQEIRRDPWFNVNLPDY 269

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 98.0 bits (245), Expect = 2e-23
 Identities = 62/341 (18%), Positives = 122/341 (35%), Gaps = 98/341 (28%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----EIDVLQRLARH-DIGGTR 154
           GEG +G+V    +   +E VA+KI   ++  R          EI + + L  H ++    
Sbjct: 16  GEGAYGEVQLAVNRVTEEAVAVKI---VDMKRAVDCPENIKKEICINKML-NHENV---- 67

Query: 155 CVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V+        N   +  E   G  L+D +  +     P    +    QL+  V ++H +
Sbjct: 68  -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGI 124

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 272
            + H D+KPEN+LL                   D     N      +K+ DFG +T F +
Sbjct: 125 GITHRDIKPENLLL-------------------DER--DN------LKISDFGLATVFRY 157

Query: 273 QDHSYVVSTR----HYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHENLEHL 327
            +   +++       Y APE++    ++  P D+WS G +L  + +GE  +    +    
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217

Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
                              +  + Y        W                        + 
Sbjct: 218 ---------------YSDWKEKKTYL-----NPW------------------------KK 233

Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
           +D +    + LL  +L  +P+ R+   +  +  ++ + +++
Sbjct: 234 IDSAP---LALLHKILVENPSARITIPDIKKDRWYNKPLKK 271

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 97.4 bits (243), Expect = 9e-23
 Identities = 70/335 (20%), Positives = 130/335 (38%), Gaps = 87/335 (25%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHDIGGT 153
               K+GEG+ G V    +      VA+K++    + R   +  E+ +++     ++   
Sbjct: 48  DSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV--- 104

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             V++   +     + ++ E L G +L D + +       I  V      +L+++A++H 
Sbjct: 105 --VEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATV---CEAVLQALAYLHA 159

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---STT 269
             +IH D+K ++ILL                 + DG           +KL DFG     +
Sbjct: 160 QGVIHRDIKSDSILL-----------------TLDGR----------VKLSDFGFCAQIS 192

Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
            +      +V T ++ APEVI    +    D+WS+G +++E+  GE              
Sbjct: 193 KDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE-------------- 238

Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
                 P P+                           S   ++A+ +L   P   +++  
Sbjct: 239 ------P-PYF--------------------------SDSPVQAMKRLRDSPPPKLKNSH 265

Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             +  L D L+ +L  DP ER  A+E L HPF  +
Sbjct: 266 KVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQ 300

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 96.6 bits (241), Expect = 1e-22
 Identities = 75/335 (22%), Positives = 128/335 (38%), Gaps = 87/335 (25%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHDIGGT 153
               K+G+G  G V    D    + VAI+ +    + ++  +I EI V++     +I   
Sbjct: 23  TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI--- 79

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             V   + +   + + +V E L G SL D + +       I  V    R+ L+++ F+H 
Sbjct: 80  --VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLHS 134

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---T 269
            ++IH D+K +NILL                   DGS          +KL DFG     T
Sbjct: 135 NQVIHRDIKSDNILL-----------------GMDGS----------VKLTDFGFCAQIT 167

Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
            E    S +V T ++ APEV+    +    D+WS+G + +E+  GE              
Sbjct: 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE-------------- 213

Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
                 P P+                           + + +RA++ +       +Q+ +
Sbjct: 214 ------P-PYL--------------------------NENPLRALYLIATNGTPELQNPE 240

Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
             +    D L   L  D  +R  A+E L+H F   
Sbjct: 241 KLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKI 275

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 96.1 bits (240), Expect = 1e-22
 Identities = 77/342 (22%), Positives = 116/342 (33%), Gaps = 98/342 (28%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH-DIGGTRC 155
           G GTFG+V           VA+KI+  + I        I  EI  L +L RH  I     
Sbjct: 20  GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL-KLFRHPHI----- 73

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           +++           +V E + G  L+D++ K+          R L +Q+L +V + H   
Sbjct: 74  IKLYQVISTPTDFFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRHM 131

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           ++H DLKPEN+LL         D               N       K+ DFG +      
Sbjct: 132 VVHRDLKPENVLL---------DAH------------MN------AKIADFGLSNMMSDG 164

Query: 275 HSYVVSTR----HYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLEHLAM 329
               + T     +Y APEVI G  +  P  D+WS G IL  L  G   F   E++  L  
Sbjct: 165 E--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD-DEHVPTL-- 219

Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
                       +        +Y  R                                  
Sbjct: 220 ---------FKKIRGGVFYIPEYLNRSVA------------------------------- 239

Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
                   LL  +L+ DP +R   ++   H +F +D+     
Sbjct: 240 -------TLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLF 274

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 98.1 bits (244), Expect = 1e-22
 Identities = 61/354 (17%), Positives = 118/354 (33%), Gaps = 54/354 (15%)

Query: 95  KILSKMGEG--TFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHD 149
           ++L+ +G+G      V         E V ++ +      N+       E+ V +     +
Sbjct: 28  ELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPN 87

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     V  R  F   N + +V   +   S  D +  +         +  + + +L+++ 
Sbjct: 88  I-----VPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALD 142

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS- 267
           ++H +  +H  +K  +IL+                 S DG           + L    S 
Sbjct: 143 YIHHMGYVHRSVKASHILI-----------------SVDGK----------VYLSGLRSN 175

Query: 268 ---------TTFEHQDHSYVVSTRHYRAPEVI--LGLGWNYPCDLWSVGCILVELCSGEA 316
                        H    Y V    + +PEV+     G++   D++SVG    EL +G  
Sbjct: 176 LSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHV 235

Query: 317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376
            F+   ++    M+   L      ++  +   AE+     +R     G +   +      
Sbjct: 236 PFK---DMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRP 292

Query: 377 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                     H   S       ++  L+ +P  R  A   L H FF +  RR +
Sbjct: 293 SNGDSPSHPYHRTFSP-HFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRAS 345

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 97.1 bits (242), Expect = 1e-22
 Identities = 61/344 (17%), Positives = 127/344 (36%), Gaps = 92/344 (26%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           +++  +G GT+GQV +    +  +L AIK++       E    EI++L++ + H      
Sbjct: 27  ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATY 86

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
            G       +N     + + +V E     S+ D ++     +   + +  + R++L  ++
Sbjct: 87  YG---AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS 143

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-- 266
            +H+ ++IH D+K +N+LL                 +++            +KL+DFG  
Sbjct: 144 HLHQHKVIHRDIKGQNVLL-----------------TENAE----------VKLVDFGVS 176

Query: 267 -STTFEHQDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQT 320
                     +  + T ++ APEVI         +++  DLWS+G   +E+  G      
Sbjct: 177 AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP---- 232

Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
                            P   +                            MRA++ + R 
Sbjct: 233 -----------------PLCDM--------------------------HPMRALFLIPRN 249

Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
           P   ++    S       ++  L  + ++R    + ++HPF   
Sbjct: 250 PAPRLKSKKWSK-KFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 96.6 bits (241), Expect = 2e-22
 Identities = 62/344 (18%), Positives = 122/344 (35%), Gaps = 98/344 (28%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----EIDVLQRLARH-DIGGTR 154
           GEG +G+V    +   +E VA+KI   ++  R          EI + + L  H ++    
Sbjct: 16  GEGAYGEVQLAVNRVTEEAVAVKI---VDMKRAVDCPENIKKEICINKML-NHENV---- 67

Query: 155 CVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V+        N   +  E   G  L+D +  +     P    +    QL+  V ++H +
Sbjct: 68  -VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGI 124

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-STTFEH 272
            + H D+KPEN+LL                   D     N      +K+ DFG +T F +
Sbjct: 125 GITHRDIKPENLLL-------------------DER--DN------LKISDFGLATVFRY 157

Query: 273 QDHSYVVSTR----HYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHENLEHL 327
            +   +++       Y APE++    ++  P D+WS G +L  + +GE  +    +    
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217

Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
                              +  + Y        W                        + 
Sbjct: 218 ---------------YSDWKEKKTY-----LNPW------------------------KK 233

Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
           +D +    + LL  +L  +P+ R+   +  +  ++ + +++   
Sbjct: 234 IDSAP---LALLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 96.1 bits (240), Expect = 2e-22
 Identities = 70/339 (20%), Positives = 116/339 (34%), Gaps = 90/339 (26%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDI 150
           K    +GEG+F  VV   +       AIKI+    I K  +      E DV+ RL  H  
Sbjct: 33  KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPF 91

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                V++   F     +           L  ++RK    SF     R    +++ ++ +
Sbjct: 92  ----FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEY 145

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H   +IH DLKPENILL    ++++ D+      S +    +              + +
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------ANS 191

Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
           F        V T  Y +PE++         DLW++GCI+ +L +G   F    N     +
Sbjct: 192 F--------VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGN--EYLI 240

Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
            ++++                         D+P+                          
Sbjct: 241 FQKII---------------------KLEYDFPEKFFP---------------------- 257

Query: 390 HSAGDLIDLLQGLLRYDPAERL------KAREALRHPFF 422
                  DL++ LL  D  +RL             HPFF
Sbjct: 258 ----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 95.4 bits (238), Expect = 3e-22
 Identities = 66/364 (18%), Positives = 118/364 (32%), Gaps = 115/364 (31%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
            +  ++G+G++G V   ++       A+K+   ++K +                      
Sbjct: 16  TLKDEIGKGSYGVVKLAYNENDNTYYAMKV---LSKKKLIRQAGFPRRPPPRGTRPAPGG 72

Query: 155 CVQIRNWFD--YR-------------------------NHICIVFEKL-GPSLYDFLRKN 186
           C+Q R   +  Y+                         +H+ +VFE +    + +     
Sbjct: 73  CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK 132

Query: 187 SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246
                  D  R   + L++ + ++H  ++IH D+KP N+L+                  +
Sbjct: 133 P---LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV-----------------GE 172

Query: 247 DGSYFKNLPKSSAIKLIDFG-STTFEHQDH--SYVVSTRHYRAPEVILGLGWNY---PCD 300
           DG           IK+ DFG S  F+  D   S  V T  + APE +      +     D
Sbjct: 173 DGH----------IKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALD 222

Query: 301 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD 360
           +W++G  L     G+  F   E +  L           H  +                  
Sbjct: 223 VWAMGVTLYCFVFGQCPFM-DERIMCL-----------HSKIKSQA-------------- 256

Query: 361 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP 420
                            L  P+      D +  DL DL+  +L  +P  R+   E   HP
Sbjct: 257 -----------------LEFPD----QPDIAE-DLKDLITRMLDKNPESRIVVPEIKLHP 294

Query: 421 FFTR 424
           + TR
Sbjct: 295 WVTR 298

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 94.7 bits (236), Expect = 6e-22
 Identities = 61/246 (24%), Positives = 95/246 (38%), Gaps = 51/246 (20%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           ++   +G G FG V  C    + + VAIK + S    R+A ++E+  L R+  H      
Sbjct: 11  EVEEVVGRGAFGVV--CKAKWRAKDVAIKQIES-ESERKAFIVELRQLSRV-NHPNIVKL 66

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRK-NSYRSFPIDLVRELGRQLLESV 207
            G              N +C+V E   G SLY+ L        +          Q  + V
Sbjct: 67  YGACL-----------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 115

Query: 208 AFMHELR---LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
           A++H ++   LIH DLKP N+LLV+   V                          +K+ D
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTV--------------------------LKICD 149

Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
           FG+        +    +  + APEV  G  ++  CD++S G IL E+ +    F      
Sbjct: 150 FGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP 209

Query: 325 EHLAMM 330
               M 
Sbjct: 210 AFRIMW 215

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 94.4 bits (235), Expect = 1e-21
 Identities = 67/360 (18%), Positives = 118/360 (32%), Gaps = 108/360 (30%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD-IG 151
           + L +MG GT GQV +    +   ++A+K +R     +  +  ++++DV+ +      I 
Sbjct: 28  ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYI- 86

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               VQ    F     + I  E +G       ++      P  ++ ++   +++++ ++ 
Sbjct: 87  ----VQCFGTFITNTDVFIAMELMGTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYYLK 141

Query: 212 -ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---- 266
            +  +IH D+KP NILL                  + G           IKL DFG    
Sbjct: 142 EKHGVIHRDVKPSNILL-----------------DERGQ----------IKLCDFGISGR 174

Query: 267 ------STTFEHQDHSYVVSTRHYRAPEVI-----LGLGWNYPCDLWSVGCILVELCSGE 315
                                  Y APE I         ++   D+WS+G  LVEL +G+
Sbjct: 175 LVDDKAKDRS--------AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226

Query: 316 A-LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
                   + E L  +  +    P                                    
Sbjct: 227 FPYKNCKTDFEVLTKV--LQEEPP------------------------------------ 248

Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVA 434
                LP     H+  S  D    ++  L  D  +R K  + L H F  R       + +
Sbjct: 249 ----LLPG----HMGFSG-DFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVAS 299

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 93.5 bits (233), Expect = 1e-21
 Identities = 62/356 (17%), Positives = 120/356 (33%), Gaps = 109/356 (30%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARHD-IGG 152
            + ++G G +G V +       +++A+K +R+    +E   +  ++D+  R         
Sbjct: 11  PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT-- 68

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI--DLVRELGRQLLESVAFM 210
              V           + I  E +  SL  F ++   +   I  D++ ++   +++++  +
Sbjct: 69  ---VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 125

Query: 211 H-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG--- 266
           H +L +IH D+KP N+L+                 +  G           +K+ DFG   
Sbjct: 126 HSKLSVIHRDVKPSNVLI-----------------NALGQ----------VKMCDFGISG 158

Query: 267 -------STTFEHQDHSYVVSTRHYRAPEVILG----LGWNYPCDLWSVGCILVELCSGE 315
                                 + Y APE I       G++   D+WS+G  ++EL    
Sbjct: 159 YLVDDVAKDID--------AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 210

Query: 316 ALFQTHEN-LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374
             + +     + L  +  V  P P                   +L  P    S       
Sbjct: 211 FPYDSWGTPFQQLKQV--VEEPSP-------------------QL--PADKFSA------ 241

Query: 375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                              + +D     L+ +  ER    E ++HPFFT    + T
Sbjct: 242 -------------------EFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGT 278

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 93.6 bits (233), Expect = 1e-21
 Identities = 73/341 (21%), Positives = 130/341 (38%), Gaps = 85/341 (24%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
            +L K+GEG++G V +    E  ++VAIK V  +    +  + EI ++Q+     +    
Sbjct: 32  DVLEKLGEGSYGSVYKAIHKETGQIVAIKQV-PVESDLQEIIKEISIMQQCDSPHV---- 86

Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V+    +     + IV E     S+ D +R  + ++   D +  + +  L+ + ++H +
Sbjct: 87  -VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFM 144

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---TF 270
           R IH D+K  NILL                 + +G            KL DFG     T 
Sbjct: 145 RKIHRDIKAGNILL-----------------NTEGH----------AKLADFGVAGQLTD 177

Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
                + V+ T  + APEVI  +G+N   D+WS+G   +E+  G+               
Sbjct: 178 TMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK--------------- 222

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
                P P+  +                            MRA++ +   P    +  + 
Sbjct: 223 -----P-PYADI--------------------------HPMRAIFMIPTNPPPTFRKPEL 250

Query: 391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
            + +  D ++  L   P +R  A + L+HPF         L
Sbjct: 251 WSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSIL 291

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 93.9 bits (234), Expect = 2e-21
 Identities = 72/348 (20%), Positives = 121/348 (34%), Gaps = 99/348 (28%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR------EAAMIEIDVLQRLARH 148
           ++L  +G+G F +V           VAIKI   I+K +      +    E+ +++ L  H
Sbjct: 18  RLLKTIGKGNFAKVKLARHILTGREVAIKI---IDKTQLNPTSLQKLFREVRIMKIL-NH 73

Query: 149 -DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
            +I     V++    +    + ++ E   G  ++D+L  +          R   RQ++ +
Sbjct: 74  PNI-----VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSA 126

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           V + H+ R++H DLK EN+LL                   D +          IK+ DFG
Sbjct: 127 VQYCHQKRIVHRDLKAENLLL-----------------DADMN----------IKIADFG 159

Query: 267 -STTFEHQDH-SYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHEN 323
            S  F              Y APE+  G  ++ P  D+WS+G IL  L SG   F   +N
Sbjct: 160 FSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQN 218

Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
           L+ L              V+R   R   Y                               
Sbjct: 219 LKEL-----------RERVLRGKYRIPFYMSTDCE------------------------- 242

Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
                        +LL+  L  +P +R    + ++  +         L
Sbjct: 243 -------------NLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDEL 277

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 92.7 bits (231), Expect = 3e-21
 Identities = 65/352 (18%), Positives = 125/352 (35%), Gaps = 106/352 (30%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAM---IEIDVLQRLARH-DIGGTR 154
           GEG++G+V E  D+E     A+KI+  + + +          EI +L+RL RH ++    
Sbjct: 14  GEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNV---- 68

Query: 155 CVQIRN--WFDYRNHICIVFE--KLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
            +Q+ +  + + +  + +V E    G   + D + +   + FP+        QL++ + +
Sbjct: 69  -IQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPE---KRFPVCQAHGYFCQLIDGLEY 124

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 268
           +H   ++H D+KP N+LL                 +  G+          +K+   G + 
Sbjct: 125 LHSQGIVHKDIKPGNLLL-----------------TTGGT----------LKISALGVAE 157

Query: 269 TFEHQDHSYVVSTR----HYRAPEVILGLGWNY---PCDLWSVGCILVELCSGEALFQTH 321
                       T      ++ PE+  GL   +     D+WS G  L  + +G   F+  
Sbjct: 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLD-TFSGFKVDIWSAGVTLYNITTGLYPFE-G 215

Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           +N+  L              + +                                     
Sbjct: 216 DNIYKL-----------FENIGKGSYAIPGDCGPPLS----------------------- 241

Query: 382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLV 433
                          DLL+G+L Y+PA+R   R+  +H +F +        V
Sbjct: 242 ---------------DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPV 278

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 94.5 bits (235), Expect = 3e-21
 Identities = 84/373 (22%), Positives = 128/373 (34%), Gaps = 106/373 (28%)

Query: 66  PRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV 125
           P           K GHY+  +G+ L          G GTFG+V           VA+KI+
Sbjct: 2   PMAEKQKHDGRVKIGHYI--LGDTL----------GVGTFGKVKVGKHELTGHKVAVKIL 49

Query: 126 --RSINKYREAAMI--EIDVLQRLARH-DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSL 179
             + I        I  EI  L +L RH  I     +++       + I +V E + G  L
Sbjct: 50  NRQKIRSLDVVGKIRREIQNL-KLFRHPHI-----IKLYQVISTPSDIFMVMEYVSGGEL 103

Query: 180 YDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK 239
           +D++ KN          R L +Q+L  V + H   ++H DLKPEN+LL         D  
Sbjct: 104 FDYICKN--GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL---------DAH 152

Query: 240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS--TRHYRAPEVILGLGWNY 297
                        N       K+ DFG +           S  + +Y APEVI G  +  
Sbjct: 153 ------------MN------AKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 194

Query: 298 P-CDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRG 356
           P  D+WS G IL  L  G   F   +++  L              +        +Y    
Sbjct: 195 PEVDIWSSGVILYALLCGTLPFD-DDHVPTL-----------FKKICDGIFYTPQYLNPS 242

Query: 357 ARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREA 416
                                                    LL+ +L+ DP +R   ++ 
Sbjct: 243 VI--------------------------------------SLLKHMLQVDPMKRATIKDI 264

Query: 417 LRHPFFTRDVRRP 429
             H +F +D+ + 
Sbjct: 265 REHEWFKQDLPKY 277

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 92.4 bits (230), Expect = 5e-21
 Identities = 72/350 (20%), Positives = 122/350 (34%), Gaps = 91/350 (26%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARHD-IG 151
           K L ++G G +G V +       +++A+K +RS    +E   +  ++DV+ R +    I 
Sbjct: 25  KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYI- 83

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK---NSYRSFPIDLVRELGRQLLESVA 208
               VQ            I  E +  S   F +          P +++ ++    ++++ 
Sbjct: 84  ----VQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139

Query: 209 FMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 266
            +   L++IH D+KP NILL                  + G+          IKL DFG 
Sbjct: 140 HLKENLKIIHRDIKPSNILL-----------------DRSGN----------IKLCDFGI 172

Query: 267 STTFEH-QDHSYVVSTRHYRAPEVI----LGLGWNYPCDLWSVGCILVELCSGEA-LFQT 320
           S         +     R Y APE I       G++   D+WS+G  L EL +G     + 
Sbjct: 173 SGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKW 232

Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
           +   + L  +  V G  P                   +L   +      S          
Sbjct: 233 NSVFDQLTQV--VKGDPP-------------------QL--SNSEEREFSP--------- 260

Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
                          I+ +   L  D ++R K +E L+HPF      R  
Sbjct: 261 -------------SFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAV 297

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 92.0 bits (229), Expect = 5e-21
 Identities = 72/347 (20%), Positives = 134/347 (38%), Gaps = 90/347 (25%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHDIGGT 153
           +I+ ++G+G FG+V +  + E   L A K++ + ++      I EI++L       I   
Sbjct: 22  EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI--- 78

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             V++   + +   + I+ E   G ++   + +   R      ++ + RQ+LE++ F+H 
Sbjct: 79  --VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHS 135

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST---T 269
            R+IH DLK  N+L+                 + +G           I+L DFG +    
Sbjct: 136 KRIIHRDLKAGNVLM-----------------TLEGD----------IRLADFGVSAKNL 168

Query: 270 FEHQDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
              Q     + T ++ APEV++        ++Y  D+WS+G  L+E+   E         
Sbjct: 169 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE--------- 219

Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
                      P PHH +                          + MR + K+ +     
Sbjct: 220 -----------P-PHHEL--------------------------NPMRVLLKIAKSDPPT 241

Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
           +      + +  D L+  L  +P  R  A + L HPF +       L
Sbjct: 242 LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKAL 288

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 90.8 bits (226), Expect = 7e-21
 Identities = 57/255 (22%), Positives = 94/255 (36%), Gaps = 52/255 (20%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----EIDVLQRLARHD 149
            +   +G G FG+V   F    +  VA+K  R       +  I     E  +   L +H 
Sbjct: 10  TLEEIIGIGGFGKVYRAFWIGDE--VAVKAARHDPDEDISQTIENVRQEAKLFAML-KHP 66

Query: 150 -----IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
                 G   C++         ++C+V E   G  L   L     +  P D++     Q+
Sbjct: 67  NIIALRGV--CLK-------EPNLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQI 114

Query: 204 LESVAFMHE---LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260
              + ++H+   + +IH DLK  NIL+                             +  +
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILI-------------------LQKVENGDLSNKIL 155

Query: 261 KLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
           K+ DFG     H+           + APEVI    ++   D+WS G +L EL +GE  F 
Sbjct: 156 KITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF- 214

Query: 320 THENLEHLAMMERVL 334
               ++ LA+   V 
Sbjct: 215 --RGIDGLAVAYGVA 227

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 93.8 bits (233), Expect = 1e-20
 Identities = 67/336 (19%), Positives = 117/336 (34%), Gaps = 94/336 (27%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SI--NKYREAAMIEIDVLQRLARHDIGGTRC- 155
           G G FG+V  C   +  ++ A+K +    I   +    A+ E  +L       +    C 
Sbjct: 198 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL-----VSTGDCP 252

Query: 156 --VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             V +   F   + +  + + + G  L+  L ++    F    +R    +++  +  MH 
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHN 310

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
             +++ DLKP NILL    +V++ D                     A             
Sbjct: 311 RFVVYRDLKPANILLDEHGHVRISDLGL------------------ACDFSKKKPHAS-- 350

Query: 273 QDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331
                 V T  Y APEV+  G+ ++   D +S+GC+L +L  G + F+ H+  +   +  
Sbjct: 351 ------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 404

Query: 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS 391
             L                        ++ PD  +                         
Sbjct: 405 MTL---------------------TMAVELPDSFSP------------------------ 419

Query: 392 AGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 422
             +L  LL+GLL+ D   RL      A+E    PFF
Sbjct: 420 --ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 91.3 bits (227), Expect = 2e-20
 Identities = 71/351 (20%), Positives = 122/351 (34%), Gaps = 103/351 (29%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQRLARHDI 150
             L ++G G+FG V    D    E+VAIK +    K           E+  LQ+L   + 
Sbjct: 57  SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT 116

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                +Q R  +   +   +V E    S  D L  +  +      +  +    L+ +A++
Sbjct: 117 -----IQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYL 170

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS--- 267
           H   +IH D+K  NILL                 S+ G           +KL DFGS   
Sbjct: 171 HSHNMIHRDVKAGNILL-----------------SEPGL----------VKLGDFGSASI 203

Query: 268 ----TTFEHQDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQT 320
                +F        V T ++ APEVIL +    ++   D+WS+G   +EL   +     
Sbjct: 204 MAPANSF--------VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK----- 250

Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
                          P P   +                          ++M A++ + + 
Sbjct: 251 ---------------P-PLFNM--------------------------NAMSALYHIAQN 268

Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
            +  +Q    S     + +   L+  P +R  +   L+H F  R+     +
Sbjct: 269 ESPALQSGHWSE-YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVI 318

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 90.5 bits (225), Expect = 2e-20
 Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 42/234 (17%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIGG 152
             L K+G+G+FG+V +  DN  +++VAIKI+         E    EI VL +     +  
Sbjct: 25  TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV-- 82

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               +    +     + I+ E L G S  D L         I  +    R++L+ + ++H
Sbjct: 83  ---TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATIL---REILKGLDYLH 136

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG---ST 268
             + IH D+K  N+LL                 S+ G           +KL DFG     
Sbjct: 137 SEKKIHRDIKAANVLL-----------------SEHGE----------VKLADFGVAGQL 169

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA-LFQTH 321
           T      +  V T  + APEVI    ++   D+WS+G   +EL  GE    + H
Sbjct: 170 TDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 223

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 92.9 bits (231), Expect = 2e-20
 Identities = 70/332 (21%), Positives = 117/332 (35%), Gaps = 86/332 (25%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           G+G FG+V  C      ++ A K +        K    A+ E  +L+++    +     V
Sbjct: 193 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFV-----V 247

Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
            +   ++ ++ +C+V   + G  L   +       FP         ++   +  +H  R+
Sbjct: 248 SLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI 307

Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           ++ DLKPENILL    ++++ D   L+    +G                           
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLG-LAVHVPEGQ----------------TIKGR----- 345

Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 335
              V T  Y APEV+    + +  D W++GC+L E+ +G++ FQ  +       +ER   
Sbjct: 346 ---VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER--- 399

Query: 336 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL 395
                +V        + F   AR                                     
Sbjct: 400 -----LVKEVPEEYSERFSPQAR------------------------------------- 417

Query: 396 IDLLQGLLRYDPAERL-----KAREALRHPFF 422
             L   LL  DPAERL      ARE   HP F
Sbjct: 418 -SLCSQLLCKDPAERLGCRGGSAREVKEHPLF 448

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 89.3 bits (222), Expect = 3e-20
 Identities = 49/253 (19%), Positives = 84/253 (33%), Gaps = 56/253 (22%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--------EIDVLQRLA 146
           +   ++G+G FG V +    + K +VAIK +   +   E  MI        E+ ++  L 
Sbjct: 22  EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL- 80

Query: 147 RHD-----IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELG 200
            H       G              N   +V E +    LY  L   +       +   L 
Sbjct: 81  NHPNIVKLYGLMH-----------NPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLM 128

Query: 201 RQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
             +   + +M      ++H DL+  NI L S                       +     
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNIFLQS----------------------LDENAPV 166

Query: 259 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNY--PCDLWSVGCILVELCSGEA 316
             K+ DFG +       S ++    + APE I     +Y    D +S   IL  + +GE 
Sbjct: 167 CAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226

Query: 317 LFQTHENLEHLAM 329
            F   +   +  +
Sbjct: 227 PF---DEYSYGKI 236

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 88.9 bits (221), Expect = 7e-20
 Identities = 47/229 (20%), Positives = 90/229 (39%), Gaps = 30/229 (13%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHD---- 149
                +G+G FGQ ++    E  E++ +K +   ++  +   + E+ V++ L  H     
Sbjct: 13  IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLK 71

Query: 150 -IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            IG     +          +  + E + G +L   ++      +P        + +   +
Sbjct: 72  FIGV--LYK-------DKRLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGM 121

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFG 266
           A++H + +IH DL   N L+   + V V D  F L+R   D        +S         
Sbjct: 122 AYLHSMNIIHRDLNSHNCLVRENKNVVVAD--FGLARLMVDEKTQPEGLRSLKKPDRKKR 179

Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
            T         VV   ++ APE+I G  ++   D++S G +L E+    
Sbjct: 180 YT---------VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRV 219

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 89.3 bits (222), Expect = 8e-20
 Identities = 68/337 (20%), Positives = 126/337 (37%), Gaps = 94/337 (27%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIG 151
            +  +G G+FG+V+     E     A+KI+    + K ++    + E  +LQ +      
Sbjct: 45  RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPF- 102

Query: 152 GTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               V++   F   +++ +V E   G  ++  LR+     F     R    Q++ +  ++
Sbjct: 103 ---LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYL 157

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H L LI+ DLKPEN+L+    Y++V D+ F                    K +   + T 
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGF-------------------AKRVKGRTWTL 198

Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
                     T    APE+IL  G+N   D W++G ++ E+ +G   F   +    + + 
Sbjct: 199 --------CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQ--PIQIY 247

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
           E+++                       ++ +P   +S                       
Sbjct: 248 EKIV---------------------SGKVRFPSHFSS----------------------- 263

Query: 391 SAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 422
              DL DLL+ LL+ D  +R         +   H +F
Sbjct: 264 ---DLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 90.2 bits (224), Expect = 1e-19
 Identities = 64/337 (18%), Positives = 116/337 (34%), Gaps = 93/337 (27%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           G G FG+V  C      +L A K +        K  + AM+E  +L ++    I     V
Sbjct: 194 GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI-----V 248

Query: 157 QIRNWFDYRNHICIVFE-----KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
            +   F+ +  +C+V        +   +Y+    N    F          Q++  +  +H
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN--PGFQEPRAIFYTAQIVSGLEHLH 306

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
           +  +I+ DLKPEN+LL     V++ D       + +    +   K             + 
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGL----AVELKAGQTKTK------------GY- 349

Query: 272 HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH-ENLEHLAMM 330
                    T  + APE++LG  +++  D +++G  L E+ +    F+   E +E+  + 
Sbjct: 350 -------AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
           +RVL                        + +PD  +                        
Sbjct: 403 QRVL---------------------EQAVTYPDKFSP----------------------- 418

Query: 391 SAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 422
                 D  + LL+ DP +RL            HP F
Sbjct: 419 ---ASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLF 452

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 87.0 bits (216), Expect = 4e-19
 Identities = 54/231 (23%), Positives = 91/231 (39%), Gaps = 40/231 (17%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++  K+G G FG++    +    E VAIK+    ++      +E    ++L      G  
Sbjct: 12  RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAP-QLHLEYRFYKQL----GSGDG 66

Query: 155 CVQIRNWF-DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             Q+  +F     +  +V E LGPSL D L     R+F +  V  +  QL+  + ++H  
Sbjct: 67  IPQVY-YFGPCGKYNAMVLELLGPSLED-LFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 124

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG------- 266
            LI+ D+KPEN L+                    G           I +IDF        
Sbjct: 125 NLIYRDVKPENFLI--------------------GR--PGNKTQQVIHIIDFALAKEYID 162

Query: 267 STTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             T +H   ++H  +  T  Y +    LG   +   DL ++G + +    G
Sbjct: 163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRG 213

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 87.5 bits (217), Expect = 6e-19
 Identities = 71/342 (20%), Positives = 118/342 (34%), Gaps = 90/342 (26%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIG 151
           IL  +G G F +V      +  ++ A+KI+    + K  E +    E DVL    R  I 
Sbjct: 65  ILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWI- 123

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                Q+   F   N++ +V E   G  L   L K   R  P ++ R    +++ ++  +
Sbjct: 124 ----TQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSV 178

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H L  +H D+KP+NILL    ++++ D+    +   DG                  S   
Sbjct: 179 HRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG---------------TVRSLVA 223

Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNY-------PCDLWSVGCILVELCSGEALFQTHEN 323
                   V T  Y +PE++  +G           CD W++G    E+  G+  F   ++
Sbjct: 224 --------VGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF-YADS 274

Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
                   +++    H+                  L  P                     
Sbjct: 275 TA--ETYGKIV----HYKE---------------HLSLPLVDEGVPE------------- 300

Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERL---KAREALRHPFF 422
                     +  D +Q LL   P  RL    A +   HPFF
Sbjct: 301 ----------EARDFIQRLLC-PPETRLGRGGAGDFRTHPFF 331

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 85.9 bits (213), Expect = 7e-19
 Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 8/134 (5%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++  K+G G+FG +    D    E VAIK+     K+ +  + E  + + +     GG  
Sbjct: 12  RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI-ESKIYKMMQ----GGVG 66

Query: 155 CVQIRNWF-DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
              IR W     ++  +V E LGPSL D L     R F +  V  L  Q++  + ++H  
Sbjct: 67  IPTIR-WCGAEGDYNVMVMELLGPSLED-LFNFCSRKFSLKTVLLLADQMISRIEYIHSK 124

Query: 214 RLIHTDLKPENILL 227
             IH D+KP+N L+
Sbjct: 125 NFIHRDVKPDNFLM 138

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 84.7 bits (210), Expect = 1e-18
 Identities = 54/231 (23%), Positives = 91/231 (39%), Gaps = 40/231 (17%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K+  ++GEG+FG + E  +    + VAIK     +   +    E    + L     G T 
Sbjct: 13  KVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRD-EYRTYKLL----AGCTG 67

Query: 155 CVQIRNWF-DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
              +  +F     H  +V + LGPSL D L     R F +  V    +Q+L  V  +HE 
Sbjct: 68  IPNVY-YFGQEGLHNVLVIDLLGPSLED-LLDLCGRKFSVKTVAMAAKQMLARVQSIHEK 125

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG------- 266
            L++ D+KP+N L+                         N   ++ I ++DFG       
Sbjct: 126 SLVYRDIKPDNFLI----------------------GRPNSKNANMIYVVDFGMVKFYRD 163

Query: 267 STTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314
             T +H   ++   +  T  Y +    LG   +   DL ++G + +    G
Sbjct: 164 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRG 214

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 85.1 bits (211), Expect = 2e-18
 Identities = 63/339 (18%), Positives = 123/339 (36%), Gaps = 94/339 (27%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHD-I 150
           IL  +G+G+FG+V     N+ K++ A+K +      +  E      E+ ++Q L  H  +
Sbjct: 19  ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFL 77

Query: 151 GGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                V +   F     + +V +  LG  L   L++N    F  + V+    +L+ ++ +
Sbjct: 78  -----VNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDY 130

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 268
           +   R+IH D+KP+NILL         D        + G           + + DF  + 
Sbjct: 131 LQNQRIIHRDMKPDNILL---------D--------EHGH----------VHITDFNIAA 163

Query: 269 TFEHQDHSYVVS-TRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
               +     ++ T+ Y APE+     G G+++  D WS+G    EL  G   +    + 
Sbjct: 164 MLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST 223

Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
               ++                            + +P   +                  
Sbjct: 224 SSKEIVHTFE---------------------TTVVTYPSAWSQ----------------- 245

Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERL-KAREALRHPFF 422
                    +++ LL+ LL  +P +R  +  +    P+ 
Sbjct: 246 ---------EMVSLLKKLLEPNPDQRFSQLSDVQNFPYM 275

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 85.6 bits (212), Expect = 3e-18
 Identities = 69/340 (20%), Positives = 122/340 (35%), Gaps = 88/340 (25%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIG 151
           IL  +G G FG+V         ++ A+KI+    + K  E A    E DVL       I 
Sbjct: 78  ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWI- 136

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                 +   F   N++ +V +   G  L   L K   R  P ++ R    +++ ++  +
Sbjct: 137 ----TTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAIDSV 191

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H+L  +H D+KP+NIL+    ++++ D+    +  +DG                  S+  
Sbjct: 192 HQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG---------------TVQSSVA 236

Query: 271 EHQDHSYVVSTRHYRAPEVILGL-----GWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
                   V T  Y +PE++  +      +   CD WS+G  + E+  GE  F   E+L 
Sbjct: 237 --------VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF-YAESLV 287

Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
                 +++                       R  +P                       
Sbjct: 288 --ETYGKIM-------------------NHKERFQFP----------------------- 303

Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERL---KAREALRHPFF 422
             V   + +  DL++ L+      RL      +  +HPFF
Sbjct: 304 TQVTDVSENAKDLIRRLIC-SREHRLGQNGIEDFKKHPFF 342

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 84.8 bits (210), Expect = 3e-18
 Identities = 39/189 (20%), Positives = 66/189 (34%), Gaps = 47/189 (24%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
            +  K+G G FG +   F   K E  A  +V+   +       E+   QR+A+ D     
Sbjct: 40  VLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKW 99

Query: 155 CVQIRN---------WF--------DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVR 197
             + +                     YR    +V E+LG  L     +N   +F    V 
Sbjct: 100 IERKQLDYLGIPLFYGSGLTEFKGRSYR---FMVMERLGIDLQKISGQN--GTFKKSTVL 154

Query: 198 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 257
           +LG ++L+ + ++HE   +H D+K  N+LL                              
Sbjct: 155 QLGIRMLDVLEYIHENEYVHGDIKAANLLL-------------------------GYKNP 189

Query: 258 SAIKLIDFG 266
             + L D+G
Sbjct: 190 DQVYLADYG 198

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 84.4 bits (209), Expect = 4e-18
 Identities = 34/194 (17%), Positives = 63/194 (32%), Gaps = 54/194 (27%)

Query: 95  KILSKMGEGTFGQV--------VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
           K+ S       G +        + C    +K+  ++K+     +       E +  QR A
Sbjct: 45  KLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRL----FNEQNFFQRAA 100

Query: 147 RHD-------IGGTRCVQIRN--WF-----DYRNHICIVFEKLGPSLYDFLRKNSYRSFP 192
           +         +  T  + I     F      YR    +V   LG SL   L  +      
Sbjct: 101 KPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYR---FLVLPSLGRSLQSALDVSPKHVLS 157

Query: 193 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
              V ++  +LL+++ F+HE   +H ++  ENI +                         
Sbjct: 158 ERSVLQVACRLLDALEFLHENEYVHGNVTAENIFV------------------------- 192

Query: 253 NLPKSSAIKLIDFG 266
           +    S + L  +G
Sbjct: 193 DPEDQSQVTLAGYG 206

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 85.4 bits (211), Expect = 4e-18
 Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 8/134 (5%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++  K+G G+FG++    + +  E VAIK+     K+ +    E  + + L     GGT 
Sbjct: 10  RLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLY-ESKIYRILQ----GGTG 64

Query: 155 CVQIRNWF-DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
              +R WF    ++  +V + LGPSL D L     R   +  V  L  Q++  V F+H  
Sbjct: 65  IPNVR-WFGVEGDYNVLVMDLLGPSLED-LFNFCSRKLSLKTVLMLADQMINRVEFVHSK 122

Query: 214 RLIHTDLKPENILL 227
             +H D+KP+N L+
Sbjct: 123 SFLHRDIKPDNFLM 136

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 83.1 bits (206), Expect = 5e-18
 Identities = 75/355 (21%), Positives = 128/355 (36%), Gaps = 104/355 (29%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIGG 152
           ++   +G G    V   +   KKE VAIK +         +  + EI  + +    +I  
Sbjct: 18  ELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI-- 75

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRE------LGRQLLE 205
              V     F  ++ + +V + L G S+ D ++    +      V +      + R++LE
Sbjct: 76  ---VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
            + ++H+   IH D+K  NILL                  +DGS          +++ DF
Sbjct: 133 GLEYLHKNGQIHRDVKAGNILL-----------------GEDGS----------VQIADF 165

Query: 266 G-----STTFEHQDHSY---VVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEA 316
           G     +T  +   +      V T  + APEV+    G+++  D+WS G   +EL +G A
Sbjct: 166 GVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA 225

Query: 317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376
                                P+H          KY                  M+ +  
Sbjct: 226 ---------------------PYH----------KY----------------PPMKVLML 238

Query: 377 LLRL--PNLIMQHVDHSAG-----DLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
            L+   P+L     D             ++   L+ DP +R  A E LRH FF +
Sbjct: 239 TLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 293

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 83.1 bits (206), Expect = 6e-18
 Identities = 57/254 (22%), Positives = 95/254 (37%), Gaps = 57/254 (22%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD-- 149
            I  K+G G+FG V     +     VA+KI+   +   +     + E+ +++RL RH   
Sbjct: 40  NIKEKIGAGSFGTVHRAEWHGSD--VAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNI 96

Query: 150 ---IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYR-SFPIDLVRELGRQLL 204
              +G     Q         ++ IV E L   SLY  L K+  R          +   + 
Sbjct: 97  VLFMGA--VTQ-------PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVA 147

Query: 205 ESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           + + ++H     ++H +LK  N+L+     VKV                           
Sbjct: 148 KGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKV--------------------------- 180

Query: 263 IDFGSTTFEHQDHSYVVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
            DFG +  +        S   T  + APEV+     N   D++S G IL EL + +  + 
Sbjct: 181 CDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW- 239

Query: 320 THENLEHLAMMERV 333
              NL    ++  V
Sbjct: 240 --GNLNPAQVVAAV 251

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 84.0 bits (208), Expect = 7e-18
 Identities = 68/339 (20%), Positives = 124/339 (36%), Gaps = 90/339 (26%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIG 151
           ++  +G G FG+V        +++ A+K++    + K  ++A    E D++       + 
Sbjct: 73  VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV- 131

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               VQ+   F    ++ +V E + G  L + +        P    R    +++ ++  +
Sbjct: 132 ----VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAI 184

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H +  IH D+KP+N+LL  + ++K+ D+    + +K+G                    T 
Sbjct: 185 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG---------------MVRCDTA 229

Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYP----CDLWSVGCILVELCSGEALFQTHENLEH 326
                   V T  Y +PEV+   G +      CD WSVG  L E+  G+  F   ++L  
Sbjct: 230 --------VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF-YADSLV- 279

Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
                +++    +H                  L +PD                       
Sbjct: 280 -GTYSKIM----NHKN---------------SLTFPD----------------------- 296

Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLK---AREALRHPFF 422
             D S  +  +L+   L  D   RL      E  RH FF
Sbjct: 297 DNDISK-EAKNLICAFLT-DREVRLGRNGVEEIKRHLFF 333

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 82.6 bits (205), Expect = 1e-17
 Identities = 67/337 (19%), Positives = 121/337 (35%), Gaps = 94/337 (27%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIG 151
           IL  +G G+FG+V            A+K+++   + + ++      E  +L  +  H   
Sbjct: 10  ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPF- 67

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               +++   F     I ++ + + G  L+  LRK   + FP  + +    ++  ++ ++
Sbjct: 68  ---IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYL 122

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H   +I+ DLKPENILL    ++K+ D+ F                    K +   + T 
Sbjct: 123 HSKDIIYRDLKPENILLDKNGHIKITDFGF-------------------AKYVPDVTYTL 163

Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
                     T  Y APEV+    +N   D WS G ++ E+ +G   F    N   +   
Sbjct: 164 --------CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF-YDSN--TMKTY 212

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
           E++L                      A L +P                          + 
Sbjct: 213 EKIL---------------------NAELRFP-----------------------PFFNE 228

Query: 391 SAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 422
                 DLL  L+  D ++RL        +   HP+F
Sbjct: 229 DV---KDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 262

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 83.0 bits (206), Expect = 1e-17
 Identities = 64/333 (19%), Positives = 125/333 (37%), Gaps = 82/333 (24%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIGGTRCV 156
           G G++ +V+     +   + A+K+V+   +N   +      E  V ++ + H       V
Sbjct: 18  GRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPF----LV 73

Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
            + + F   + +  V E + G  L   +++   R  P +  R    ++  ++ ++HE  +
Sbjct: 74  GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGI 131

Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLK +N+LL S  ++K+ DY       K+G              +  G TT      
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGM----CKEG--------------LRPGDTT------ 167

Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 335
           S    T +Y APE++ G  + +  D W++G ++ E+ +G + F    + ++         
Sbjct: 168 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP-------- 219

Query: 336 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL 395
                     +     +                        +L     I + +   A   
Sbjct: 220 --------DQNTEDYLF----------------------QVILEKQIRIPRSLSVKA--- 246

Query: 396 IDLLQGLLRYDPAERL------KAREALRHPFF 422
             +L+  L  DP ERL         +   HPFF
Sbjct: 247 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 84.3 bits (208), Expect = 1e-17
 Identities = 65/341 (19%), Positives = 120/341 (35%), Gaps = 96/341 (28%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHDI 150
             L  +G+G+FG+V+        EL A+KI++      +   E  M+E  VL    +   
Sbjct: 344 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPF 403

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                 Q+ + F   + +  V E + G  L   +++     F          ++   + F
Sbjct: 404 ----LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFF 457

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +    +I+ DLK +N++L S  ++K+ D+       K+               I  G TT
Sbjct: 458 LQSKGIIYRDLKLDNVMLDSEGHIKIADFGM----CKEN--------------IWDGVTT 499

Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
                      T  Y APE+I    +    D W+ G +L E+ +G+A F+  +  E   +
Sbjct: 500 ------KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---L 550

Query: 330 MERVLG---PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
            + ++      P  M                         S+++                
Sbjct: 551 FQSIMEHNVAYPKSM-------------------------SKEA---------------- 569

Query: 387 HVDHSAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 422
                    + + +GL+   P +RL       R+   H FF
Sbjct: 570 ---------VAICKGLMTKHPGKRLGCGPEGERDIKEHAFF 601

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 82.8 bits (205), Expect = 2e-17
 Identities = 63/333 (18%), Positives = 125/333 (37%), Gaps = 82/333 (24%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIGGTRCV 156
           G G++ +V+     +   + A+++V+   +N   +      E  V ++ + H       V
Sbjct: 61  GRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPF----LV 116

Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
            + + F   + +  V E + G  L   +++   R  P +  R    ++  ++ ++HE  +
Sbjct: 117 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGI 174

Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLK +N+LL S  ++K+ DY       K+G              +  G TT      
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGM----CKEG--------------LRPGDTT------ 210

Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 335
           S    T +Y APE++ G  + +  D W++G ++ E+ +G + F    + ++         
Sbjct: 211 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP-------- 262

Query: 336 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL 395
                     +     +                        +L     I + +   A   
Sbjct: 263 --------DQNTEDYLF----------------------QVILEKQIRIPRSLSVKA--- 289

Query: 396 IDLLQGLLRYDPAERL------KAREALRHPFF 422
             +L+  L  DP ERL         +   HPFF
Sbjct: 290 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 80.8 bits (200), Expect = 3e-17
 Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 53/245 (21%)

Query: 95  KILSKMGEGTFGQVVE-CFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD- 149
            +  ++G G+FG V +  +  +    VA+K++       +  +A   E+ VL++  RH  
Sbjct: 27  TVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVN 81

Query: 150 ----IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
               +G +              + IV +   G SLY  L  +    F +  + ++ RQ  
Sbjct: 82  ILLFMGYST----------APQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTA 130

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLI 263
             + ++H   +IH DLK  NI L     VK+ D  F L+                     
Sbjct: 131 RGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGD--FGLAT-------------------- 168

Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQT 320
              S          +  +  + APEVI     N   +  D+++ G +L EL +G+  +  
Sbjct: 169 -EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227

Query: 321 HENLE 325
             N +
Sbjct: 228 INNRD 232

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 81.5 bits (202), Expect = 3e-17
 Identities = 63/331 (19%), Positives = 117/331 (35%), Gaps = 92/331 (27%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIGGTRCV 156
           G+G+FG+V      +  +  AIK ++   +    +    M+E  VL     H        
Sbjct: 26  GKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF----LT 81

Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
            +   F  + ++  V E L G  L   ++      F +        +++  + F+H   +
Sbjct: 82  HMFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGI 139

Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           ++ DLK +NILL    ++K+ D+       K+               +   + T     +
Sbjct: 140 VYRDLKLDNILLDKDGHIKIADFGM----CKEN--------------MLGDAKT-----N 176

Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 335
           ++   T  Y APE++LG  +N+  D WS G +L E+  G++ F   +  E   +   +  
Sbjct: 177 TF-CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE---LFHSIRM 232

Query: 336 ---PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                P  +                          +++                      
Sbjct: 233 DNPFYPRWL-------------------------EKEA---------------------- 245

Query: 393 GDLIDLLQGLLRYDPAERLKAREALR-HPFF 422
               DLL  L   +P +RL  R  +R HP F
Sbjct: 246 ---KDLLVKLFVREPEKRLGVRGDIRQHPLF 273

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 82.2 bits (203), Expect = 7e-17
 Identities = 68/342 (19%), Positives = 117/342 (34%), Gaps = 67/342 (19%)

Query: 18  PRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDD 77
           P   P       P +P  K      C +  G         S    G  P  GSP      
Sbjct: 16  PDIDPLEALMTNPVVPESKRFCW-NCGRPVGRSDSETKGASE---GWCPYCGSPYSFLPQ 71

Query: 78  KDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFD-NEKKELVAIKIVRSIN--KYREA 134
                    G+ +  + ++   +  G  G +    D N     V +K +      + +  
Sbjct: 72  ------LNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAM 125

Query: 135 AMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC-----IVFEKL-GPSLYDFLRKNSY 188
           AM E   L  +    I     VQI N+ ++ +        IV E + G SL         
Sbjct: 126 AMAERQFLAEVVHPSI-----VQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKG---- 176

Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248
           +  P+        ++L +++++H + L++ DLKPENI+L                 +++ 
Sbjct: 177 QKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML-----------------TEEQ 219

Query: 249 SYFKNLPKSSAIKLIDFG---STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
                      +KLID G             Y+  T  ++APE++   G     D+++VG
Sbjct: 220 -----------LKLIDLGAVSRIN----SFGYLYGTPGFQAPEIVRT-GPTVATDIYTVG 263

Query: 306 CILVELCSGEALFQTHENLEHLAMMERVLGPLP--HHMVIRA 345
             L  L            ++ L   + VL        ++ RA
Sbjct: 264 RTLAALTLDLPTR-NGRYVDGLPEDDPVLKTYDSYGRLLRRA 304

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 80.5 bits (199), Expect = 1e-16
 Identities = 79/340 (23%), Positives = 130/340 (38%), Gaps = 96/340 (28%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIG 151
            L  +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH   
Sbjct: 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPF- 209

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                 ++  F   + +C V E   G  L+  L +   R F  D  R  G +++ ++ ++
Sbjct: 210 ---LTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYL 264

Query: 211 HELR-LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           H  + +++ DLK EN++L    ++K+ D+       K+G              I  G+T 
Sbjct: 265 HSEKNVVYRDLKLENLMLDKDGHIKITDFGL----CKEG--------------IKDGATM 306

Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHL 327
                      T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L
Sbjct: 307 ------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 360

Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            +ME +    P  +                           ++                 
Sbjct: 361 ILMEEI--RFPRTL-------------------------GPEA----------------- 376

Query: 388 VDHSAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 422
                     LL GLL+ DP +RL      A+E ++H FF
Sbjct: 377 --------KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 79.6 bits (197), Expect = 1e-16
 Identities = 78/337 (23%), Positives = 126/337 (37%), Gaps = 101/337 (29%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIGGTRC- 155
           G+GTFG+V+   +       A+KI+R   I    E A  + E  VLQ         TR  
Sbjct: 14  GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN--------TRHP 65

Query: 156 --VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
               ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ ++ ++H 
Sbjct: 66  FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHS 123

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
             +++ D+K EN++L    ++K+ D+       K+G              I  G+T    
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGL----CKEG--------------ISDGATM--- 162

Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF--QTHENLEHLAMM 330
                   T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +M
Sbjct: 163 ---KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
           E +    P  +                         S ++                    
Sbjct: 220 EEI--RFPRTL-------------------------SPEA-------------------- 232

Query: 391 SAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 422
                  LL GLL+ DP +RL      A+E + H FF
Sbjct: 233 -----KSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 80.0 bits (198), Expect = 1e-16
 Identities = 76/331 (22%), Positives = 130/331 (39%), Gaps = 89/331 (26%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIGGTRCV 156
           G+G+FG+V+      ++   A+K+++  +I K +E    M E +VL +  +H       V
Sbjct: 47  GKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF----LV 102

Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
            +   F   + +  V + + G  L+  L++   R F     R    ++  ++ ++H L +
Sbjct: 103 GLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNI 160

Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           ++ DLKPENILL S  ++ + D+       K+               I+  STT      
Sbjct: 161 VYRDLKPENILLDSQGHIVLTDFGL----CKEN--------------IEHNSTT------ 196

Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 335
           S    T  Y APEV+    ++   D W +G +L E+  G   F +    E   M + +L 
Sbjct: 197 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---MYDNILN 253

Query: 336 PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL 395
                                                   K L+L      ++ +SA   
Sbjct: 254 ----------------------------------------KPLQLK----PNITNSA--- 266

Query: 396 IDLLQGLLRYDPAERL----KAREALRHPFF 422
             LL+GLL+ D  +RL       E   H FF
Sbjct: 267 RHLLEGLLQKDRTKRLGAKDDFMEIKSHVFF 297

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 79.2 bits (196), Expect = 2e-16
 Identities = 63/335 (18%), Positives = 116/335 (34%), Gaps = 96/335 (28%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIGGTRCV 156
           G+G+FG+V+        EL A+KI++   + +  +    M+E  VL    +         
Sbjct: 29  GKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPF----LT 84

Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           Q+ + F   + +  V E + G  L           F          ++   + F+    +
Sbjct: 85  QLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 142

Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLK +N++L S  ++K+ D+       K+               I  G TT      
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFGM----CKEN--------------IWDGVTT------ 178

Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 335
                T  Y APE+I    +    D W+ G +L E+ +G+A F   E+ +   + + ++ 
Sbjct: 179 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF-EGEDEDE--LFQSIME 235

Query: 336 ---PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                P  M                         S+++                      
Sbjct: 236 HNVAYPKSM-------------------------SKEA---------------------- 248

Query: 393 GDLIDLLQGLLRYDPAERL-----KAREALRHPFF 422
              + + +GL+   P +RL       R+   H FF
Sbjct: 249 ---VAICKGLMTKHPGKRLGCGPEGERDIKEHAFF 280

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 79.2 bits (196), Expect = 2e-16
 Identities = 67/336 (19%), Positives = 118/336 (35%), Gaps = 97/336 (28%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIGGTRCV 156
           G+G+FG+V+     E  +L A+K+++   I +  +    M E  +L     H        
Sbjct: 32  GKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPF----LT 87

Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           Q+   F   + +  V E + G  L         R F     R    +++ ++ F+H+  +
Sbjct: 88  QLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIISALMFLHDKGI 145

Query: 216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH 275
           I+ DLK +N+LL    + K+ D+  +    K+G              I  G TT      
Sbjct: 146 IYRDLKLDNVLLDHEGHCKLADF-GM---CKEG--------------ICNGVTT------ 181

Query: 276 SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG 335
           +    T  Y APE++  + +    D W++G +L E+  G A F+     +   + E +L 
Sbjct: 182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD---LFEAILN 238

Query: 336 ---PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                P  +                           D+                      
Sbjct: 239 DEVVYPTWL-------------------------HEDA---------------------- 251

Query: 393 GDLIDLLQGLLRYDPAERL------KAREALRHPFF 422
                +L+  +  +P  RL           LRHPFF
Sbjct: 252 ---TGILKSFMTKNPTMRLGSLTQGGEHAILRHPFF 284

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 78.3 bits (193), Expect = 3e-16
 Identities = 61/311 (19%), Positives = 115/311 (36%), Gaps = 70/311 (22%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
            +   +G+G FG+V       + E VA+KI  S  +       EI     L RH+     
Sbjct: 45  VLQESIGKGRFGEV--WRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML-RHENILGF 101

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           I                 + +V +  + G SL+D+L + +     ++ + +L       +
Sbjct: 102 IAADNKDN-----GTWTQLWLVSDYHEHG-SLFDYLNRYT---VTVEGMIKLALSTASGL 152

Query: 208 AFMHELRL--------IHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSS 258
           A +H   +         H DLK +NIL+       + D    L+               S
Sbjct: 153 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD--LGLAVR-----------HDS 199

Query: 259 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP------CDLWSVGCILVELC 312
           A   ID              V T+ Y APEV+               D++++G +  E+ 
Sbjct: 200 ATDTIDIAPNH--------RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251

Query: 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYF----RRGARLDWPDGATSR 368
              ++   HE+ +           LP++ ++ +D   E+       +  R + P+   S 
Sbjct: 252 RRCSIGGIHEDYQ-----------LPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC 300

Query: 369 DSMRAVWKLLR 379
           +++R + K++R
Sbjct: 301 EALRVMAKIMR 311

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 78.7 bits (194), Expect = 4e-16
 Identities = 34/194 (17%), Positives = 63/194 (32%), Gaps = 54/194 (27%)

Query: 95  KILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD 149
           K+   +G+G FG +     N            +K+  S N        E+   QR A+ +
Sbjct: 38  KVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLF---TELKFYQRAAKPE 94

Query: 150 IGGTRCVQIRN---------WF--------DYRNHICIVFEKLGPSLYDFLRKNSYRSFP 192
                    +                     YR    ++ ++ G  L      N+ + F 
Sbjct: 95  QIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYR---FMIMDRFGSDLQKIYEANA-KRFS 150

Query: 193 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252
              V +L  ++L+ + ++HE   +H D+K  N+LL                         
Sbjct: 151 RKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLL------------------------- 185

Query: 253 NLPKSSAIKLIDFG 266
           N      + L+D+G
Sbjct: 186 NYKNPDQVYLVDYG 199

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 77.8 bits (192), Expect = 4e-16
 Identities = 58/311 (18%), Positives = 108/311 (34%), Gaps = 70/311 (22%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
            +L  +G+G +G+V     + + E VA+KI  S ++       E+     L RH+     
Sbjct: 11  TLLECVGKGRYGEVWRG--SWQGENVAVKIFSSRDEKSWFRETELYNTVML-RHENILGF 67

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           I      +          + ++    ++G SLYD+L+  +           +   +   +
Sbjct: 68  IASDMTSR-----HSSTQLWLITHYHEMG-SLYDYLQLTT---LDTVSCLRIVLSIASGL 118

Query: 208 AFMHELRL--------IHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSS 258
           A +H             H DLK +NIL+       + D    L+              S 
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIAD--LGLAVM-----------HSQ 165

Query: 259 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP------CDLWSVGCILVELC 312
           +   +D G+           V T+ Y APEV+               D+W+ G +L E+ 
Sbjct: 166 STNQLDVGNNP--------RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217

Query: 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYF----RRGARLDWPDGATSR 368
                    E+ +            P + V+  D   E           R + P+   S 
Sbjct: 218 RRMVSNGIVEDYK-----------PPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSD 266

Query: 369 DSMRAVWKLLR 379
            ++ ++ KL++
Sbjct: 267 PTLTSLAKLMK 277

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 76.6 bits (189), Expect = 1e-15
 Identities = 67/340 (19%), Positives = 124/340 (36%), Gaps = 95/340 (27%)

Query: 101 GEGTFGQVV---ECFDNEKKELVAIKIVR-----SINKYREAAMIEIDVLQRLARHD-IG 151
           G G +G+V    +   ++  +L A+K+++        K  E    E  VL+ + +   + 
Sbjct: 63  GTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL- 121

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               V +   F     + ++ + + G  L+  L +     F    V+    +++ ++  +
Sbjct: 122 ----VTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHL 175

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H+L +I+ D+K ENILL S  +V + D+      SK+              + D      
Sbjct: 176 HKLGIIYRDIKLENILLDSNGHVVLTDFGL----SKEF-------------VADETERA- 217

Query: 271 EHQDHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQT-HENLEHL 327
               + +   T  Y AP+++ G   G +   D WS+G ++ EL +G + F    E     
Sbjct: 218 ----YDF-CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA 272

Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            +  R+L                      +   +P   ++                    
Sbjct: 273 EISRRIL---------------------KSEPPYPQEMSA-------------------- 291

Query: 388 VDHSAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 422
                    DL+Q LL  DP +RL      A E   H FF
Sbjct: 292 ------LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 75.3 bits (186), Expect = 2e-15
 Identities = 35/255 (13%), Positives = 81/255 (31%), Gaps = 60/255 (23%)

Query: 95  KILSKMGEGTFGQVVE--CFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
             L+K+ E   G++ +     N+    + +K+++  +   +       E   L+    H 
Sbjct: 13  NFLTKLNENHSGELWKGRWQGND----IVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHP 67

Query: 150 -----IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
                +G   C           H  ++   +   SLY+ L + +          +    +
Sbjct: 68  NVLPVLGA--CQS-----PPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDM 120

Query: 204 LESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
              +AF+H L   +    L   ++++                  +D +           +
Sbjct: 121 ARGMAFLHTLEPLIPRHALNSRSVMI-----------------DEDMT----------AR 153

Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP---CDLWSVGCILVELCSGEALF 318
           +                +    + APE +     +      D+WS   +L EL + E  F
Sbjct: 154 ISMADVKFSFQSPG--RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF 211

Query: 319 QTHENLEHLAMMERV 333
               +L ++ +  +V
Sbjct: 212 ---ADLSNMEIGMKV 223

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 75.5 bits (186), Expect = 3e-15
 Identities = 49/258 (18%), Positives = 95/258 (36%), Gaps = 56/258 (21%)

Query: 95  KILSKMGEGTFGQVVE-CFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD- 149
           +I   +G+G FGQV    +  E    VAI+++          +A   E+   ++  RH+ 
Sbjct: 36  EIGELIGKGRFGQVYHGRWHGE----VAIRLIDIERDNEDQLKAFKREVMAYRQT-RHEN 90

Query: 150 ----IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
               +G   C+          H+ I+     G +LY  +R        ++  R++ ++++
Sbjct: 91  VVLFMGA--CMS-------PPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIV 140

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLI 263
           + + ++H   ++H DLK +N+       V + D  F L   S      +           
Sbjct: 141 KGMGYLHAKGILHKDLKSKNV-FYDNGKVVITD--FGLFSISGVLQAGRR---------- 187

Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP---------CDLWSVGCILVELCSG 314
                               + APE+I  L  +            D++++G I  EL + 
Sbjct: 188 --------EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR 239

Query: 315 EALFQTHENLEHLAMMER 332
           E  F+T      +  M  
Sbjct: 240 EWPFKTQPAEAIIWQMGT 257

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 75.2 bits (185), Expect = 3e-15
 Identities = 58/312 (18%), Positives = 111/312 (35%), Gaps = 72/312 (23%)

Query: 95  KILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---- 149
           +++ ++G+G +G+V    +  EK   VA+K+  +  +       EI     + RH+    
Sbjct: 40  QMVKQIGKGRYGEVWMGKWRGEK---VAVKVFFTTEEASWFRETEIYQTVLM-RHENILG 95

Query: 150 -IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
            I     ++          + ++ +  + G SLYD+L+  +        + +L    +  
Sbjct: 96  FIAA--DIKGTG---SWTQLYLITDYHENG-SLYDYLKSTT---LDAKSMLKLAYSSVSG 146

Query: 207 VAFMHELRL--------IHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKS 257
           +  +H             H DLK +NIL+       + D    L+               
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD--LGLAVK-----------FI 193

Query: 258 SAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYP------CDLWSVGCILVEL 311
           S    +D    T         V T+ Y  PEV+               D++S G IL E+
Sbjct: 194 SDTNEVDIPPNT--------RVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245

Query: 312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYF----RRGARLDWPDGATS 367
                     E  +           LP+H ++ +D   E        +  R  +P+  +S
Sbjct: 246 ARRCVSGGIVEEYQ-----------LPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSS 294

Query: 368 RDSMRAVWKLLR 379
            + +R + KL+ 
Sbjct: 295 DECLRQMGKLMT 306

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 75.3 bits (186), Expect = 4e-15
 Identities = 72/346 (20%), Positives = 137/346 (39%), Gaps = 103/346 (29%)

Query: 95  KILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRS---INKYREAA--MIEIDVLQRLA 146
           ++L  +G+G +G+V    +       ++ A+K+++    +   ++ A    E ++L+   
Sbjct: 20  ELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEE-V 78

Query: 147 RHD-IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
           +H  I     V +   F     + ++ E L G  L+  L +     F  D       ++ 
Sbjct: 79  KHPFI-----VDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEIS 131

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
            ++  +H+  +I+ DLKPENI+L    +VK+ D+       K+               I 
Sbjct: 132 MALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL----CKES--------------IH 173

Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
            G+ T     H++   T  Y APE+++  G N   D WS+G ++ ++ +G   F T EN 
Sbjct: 174 DGTVT-----HTFC-GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGENR 226

Query: 325 EHLAMMERVLG---PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
           +    ++++L     LP ++                         ++++           
Sbjct: 227 K--KTIDKILKCKLNLPPYL-------------------------TQEA----------- 248

Query: 382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 422
                          DLL+ LL+ + A RL      A E   HPFF
Sbjct: 249 --------------RDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 74.3 bits (183), Expect = 6e-15
 Identities = 69/302 (22%), Positives = 113/302 (37%), Gaps = 64/302 (21%)

Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L +HD
Sbjct: 44  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 102

Query: 150 -----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
                 G   C         R ++ ++ E    G SL D+L+K+  R   I L+ +   Q
Sbjct: 103 NIVKYKG--VCYS-----AGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLL-QYTSQ 153

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262
           + + + ++   R IH DL   NIL+ +   VK+                           
Sbjct: 154 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIG-------------------------- 187

Query: 263 IDFGSTTFEHQDHSYVVSTRHYR------APEVILGLGWNYPCDLWSVGCILVELCSGEA 316
            DFG T    QD  Y              APE +    ++   D+WS G +L EL +   
Sbjct: 188 -DFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 246

Query: 317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAV 374
             ++        +     G +    +I       +  +   RL  PDG        M   
Sbjct: 247 KSKSPPAEFMRMIGNDKQGQMIVFHLI-------ELLKNNGRLPRPDGCPDEIYMIMTEC 299

Query: 375 WK 376
           W 
Sbjct: 300 WN 301

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 73.9 bits (182), Expect = 6e-15
 Identities = 67/299 (22%), Positives = 115/299 (38%), Gaps = 58/299 (19%)

Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           K L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L +HD
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 71

Query: 150 IGGTRCVQIRN--WFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
                 V+ +   +   R ++ ++ E    G SL D+L+K+  R   I L+ +   Q+ +
Sbjct: 72  ----NIVKYKGVCYSAGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLL-QYTSQICK 125

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
            + ++   R IH DL   NIL+ +   VK+                            DF
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIG---------------------------DF 158

Query: 266 GSTTFEHQDHSYVVSTRHYR------APEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
           G T    QD  +              APE +    ++   D+WS G +L EL +     +
Sbjct: 159 GLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 218

Query: 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWK 376
           +        +     G +    +I       +  +   RL  PDG        M   W 
Sbjct: 219 SPPAEFMRMIGNDKQGQMIVFHLI-------ELLKNNGRLPRPDGCPDEIYMIMTECWN 270

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 74.5 bits (184), Expect = 7e-15
 Identities = 79/352 (22%), Positives = 128/352 (36%), Gaps = 117/352 (33%)

Query: 95  KILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARH 148
           ++L  +G+G+FG+V    +   ++ ++L A+K+++      + R    +E D+L     H
Sbjct: 27  ELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE-VNH 85

Query: 149 D-IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             I     V++   F     + ++ + L G  L+  L K     F  + V+    +L  +
Sbjct: 86  PFI-----VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALA 138

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           +  +H L +I+ DLKPENILL                  ++G           IKL DFG
Sbjct: 139 LDHLHSLGIIYRDLKPENILL-----------------DEEGH----------IKLTDFG 171

Query: 267 -----------STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
                      + +F          T  Y APEV+   G     D WS G ++ E+ +G 
Sbjct: 172 LSKESIDHEKKAYSF--------CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT 223

Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
             FQ  +  E    M  +L                                         
Sbjct: 224 LPFQGKDRKE---TMTMILK---------------------------------------- 240

Query: 376 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERL-----KAREALRHPFF 422
             L +P    Q +   A     LL+ L + +PA RL        E  RH FF
Sbjct: 241 AKLGMP----QFLSPEA---QSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 71.5 bits (176), Expect = 4e-14
 Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 57/246 (23%)

Query: 86  IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--------INKY-REAAM 136
           IG+ +  R KI+ K+G G    V    D      VAIK +          + ++ RE   
Sbjct: 5   IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN 64

Query: 137 IEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDL 195
                  +L+  +I     V + +  +  +   +V E + GP+L +++  +      +D 
Sbjct: 65  S-----SQLSHQNI-----VSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH--GPLSVDT 112

Query: 196 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 255
                 Q+L+ +   H++R++H D+KP+NIL+                   + +      
Sbjct: 113 AINFTNQILDGIKHAHDMRIVHRDIKPQNILI-----------------DSNKT------ 149

Query: 256 KSSAIKLIDFG------STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 309
               +K+ DFG       T+    +H  V+ T  Y +PE   G   +   D++S+G +L 
Sbjct: 150 ----LKIFDFGIAKALSETSLTQTNH--VLGTVQYFSPEQAKGEATDECTDIYSIGIVLY 203

Query: 310 ELCSGE 315
           E+  GE
Sbjct: 204 EMLVGE 209

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 72.9 bits (179), Expect = 5e-14
 Identities = 49/247 (19%), Positives = 98/247 (39%), Gaps = 44/247 (17%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
            +  K+G G +G+V E    +    VA+K ++      E  + E  V++ + +H      
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQL 281

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           +G   C +            I+ E    G +L D+LR+ + +     ++  +  Q+  ++
Sbjct: 282 LG--VCTR-------EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAM 331

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFG 266
            ++ +   IH +L   N L+     VKV D  F LSR     +Y  +      IK     
Sbjct: 332 EYLEKKNFIHRNLAARNCLVGENHLVKVAD--FGLSRLMTGDTYTAHAGAKFPIKWT--- 386

Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325
                              APE +    ++   D+W+ G +L E+ + G + +   +  +
Sbjct: 387 -------------------APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 427

Query: 326 HLAMMER 332
              ++E+
Sbjct: 428 VYELLEK 434

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 70.5 bits (173), Expect = 1e-13
 Identities = 58/312 (18%), Positives = 106/312 (33%), Gaps = 72/312 (23%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           ++L     G FG V +       E VA+KI    +K       E+  L  + +H+     
Sbjct: 27  QLLEVKARGRFGCVWKAQLLN--EYVAVKIFPIQDKQSWQNEYEVYSLPGM-KHENILQF 83

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           IG     +  +       + ++    + G SL DFL+ N       + +  +   +   +
Sbjct: 84  IGA--EKRGTS---VDVDLWLITAFHEKG-SLSDFLKANV---VSWNELCHIAETMARGL 134

Query: 208 AFMHE----------LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKS 257
           A++HE            + H D+K +N+LL                   + +        
Sbjct: 135 AYLHEDIPGLKDGHKPAISHRDIKSKNVLL-----------------KNNLT-------- 169

Query: 258 SAIKLIDFGSTTFEHQDHSYVVS-----TRHYRAPEVILG-LGWNYP----CDLWSVGCI 307
               + DFG         S   +     TR Y APEV+ G + +        D++++G +
Sbjct: 170 --ACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLV 227

Query: 308 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 367
           L EL S           E++   E  +G  P    ++     E    +  R    D    
Sbjct: 228 LWELASRCTAA-DGPVDEYMLPFEEEIGQHPSLEDMQ-----EVVVHKKKRPVLRDYWQK 281

Query: 368 RDSMRAVWKLLR 379
              M  + + + 
Sbjct: 282 HAGMAMLCETIE 293

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 69.3 bits (170), Expect = 2e-13
 Identities = 63/304 (20%), Positives = 106/304 (34%), Gaps = 68/304 (22%)

Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH 148
           K +  +GEG FG+V  C      +   E VA+K ++  S   +      EI++L+ L  H
Sbjct: 24  KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YH 82

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
           +      G   C +     D  N I ++ E    G SL ++L KN  +      + +   
Sbjct: 83  ENIVKYKG--ICTE-----DGGNGIKLIMEFLPSG-SLKEYLPKNKNKINLKQQL-KYAV 133

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           Q+ + + ++   + +H DL   N+L+ S   VK+                          
Sbjct: 134 QICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIG------------------------- 168

Query: 262 LIDFGSTTFEHQDHSYVVSTRHYR------APEVILGLGWNYPCDLWSVGCILVELCS-G 314
             DFG T     D  Y              APE ++   +    D+WS G  L EL +  
Sbjct: 169 --DFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYC 226

Query: 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMR 372
           ++          +       G +    ++          + G RL  P          MR
Sbjct: 227 DSDSSPMALFLKMIGPTH--GQMTVTRLV-------NTLKEGKRLPCPPNCPDEVYQLMR 277

Query: 373 AVWK 376
             W+
Sbjct: 278 KCWE 281

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 68.8 bits (169), Expect = 4e-13
 Identities = 55/273 (20%), Positives = 92/273 (33%), Gaps = 65/273 (23%)

Query: 63  GAIPRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAI 122
           G +PR        + ++G   F          ++   +G G  G V E  D  ++ +VA+
Sbjct: 13  GLVPRGSHMDGTAESREG-TQFG-------PYRLRRLVGRGGMGDVYEAEDTVRERIVAL 64

Query: 123 KIVRS--------INKY-REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE 173
           K++            +  REA         RL    +     V I ++ +    + +   
Sbjct: 65  KLMSETLSSDPVFRTRMQREA-----RTAGRLQEPHV-----VPIHDFGEIDGQLYVDMR 114

Query: 174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 232
            + G  L   LR+             + RQ+  ++   H     H D+KPENIL+     
Sbjct: 115 LINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV----- 167

Query: 233 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG------STTFEHQDHSYVVSTRHYRA 286
                       S D              L+DFG                  V T +Y A
Sbjct: 168 ------------SADD----------FAYLVDFGIASATTDEKLTQ--LGNTVGTLYYMA 203

Query: 287 PEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
           PE        Y  D++++ C+L E  +G   +Q
Sbjct: 204 PERFSESHATYRADIYALTCVLYECLTGSPPYQ 236

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 68.8 bits (169), Expect = 4e-13
 Identities = 53/255 (20%), Positives = 93/255 (36%), Gaps = 69/255 (27%)

Query: 86  IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--------INKY-REAAM 136
              +L+ R ++   +G G   +V    D      VA+K++R+          ++ REA  
Sbjct: 6   TPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREA-- 63

Query: 137 IEIDVLQRLAR---------HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKN 186
                 Q  A          +D G          +       IV E + G +L D +   
Sbjct: 64  ------QNAAALNHPAIVAVYDTGEAETPAGPLPY-------IVMEYVDGVTLRDIVHTE 110

Query: 187 SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246
                      E+     +++ F H+  +IH D+KP NI++                 S 
Sbjct: 111 --GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI-----------------SA 151

Query: 247 DGSYFKNLPKSSAIKLIDFG------STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCD 300
                       A+K++DFG       +       + V+ T  Y +PE   G   +   D
Sbjct: 152 TN----------AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201

Query: 301 LWSVGCILVELCSGE 315
           ++S+GC+L E+ +GE
Sbjct: 202 VYSLGCVLYEVLTGE 216

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 68.1 bits (167), Expect = 7e-13
 Identities = 66/300 (22%), Positives = 109/300 (36%), Gaps = 61/300 (20%)

Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHD 149
           K +S++G+G FG V  C      +    LVA+K ++     ++     EI +L+ L   D
Sbjct: 26  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSD 84

Query: 150 IGGTRCVQIRN--WFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
                 V+ R   +   R  + +V E    G  L DFL+++  R     L+     Q+ +
Sbjct: 85  ----FIVKYRGVSYGPGRQSLRLVMEYLPSG-CLRDFLQRHRARLDASRLL-LYSSQICK 138

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
            + ++   R +H DL   NIL+ S  +VK+                            DF
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAHVKIA---------------------------DF 171

Query: 266 GSTTFEHQDHSYVVSTRHYR------APEVILGLGWNYPCDLWSVGCILVELCS-GEALF 318
           G       D  Y V     +      APE +    ++   D+WS G +L EL +  +   
Sbjct: 172 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 231

Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR--DSMRAVWK 376
                 E L MM           ++       +    G RL  P    +   + M+  W 
Sbjct: 232 SPSA--EFLRMMGCERDVPALSRLL-------ELLEEGQRLPAPPACPAEVHELMKLCWA 282

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 69.0 bits (169), Expect = 8e-13
 Identities = 65/245 (26%), Positives = 103/245 (42%), Gaps = 42/245 (17%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 240

Query: 155 CVQIRNWFDY----RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
            VQ+     Y       I IV E +   SL DFL+  + +   +  + ++  Q+   +A+
Sbjct: 241 LVQL-----YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 295

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           +  +  +H DL+  NIL+      KV D  F L+R  +D  Y         IK       
Sbjct: 296 VERMNYVHRDLRAANILVGENLVCKVAD--FGLARLIEDNEYTARQGAKFPIKWT----- 348

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL 327
                            APE  L   +    D+WS G +L EL + G   +    N E L
Sbjct: 349 -----------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391

Query: 328 AMMER 332
             +ER
Sbjct: 392 DQVER 396

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 67.6 bits (164), Expect = 1e-12
 Identities = 54/255 (21%), Positives = 83/255 (32%), Gaps = 62/255 (24%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR---------SINKYREAAMIEIDVLQRL 145
           +   K+GEG FG+V +         VAIKI+          S  K  E  + EI + + L
Sbjct: 23  QRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKEL 80

Query: 146 ARHDIG------------GTRCVQ-------IRNWFDYRN-----------------HIC 169
           +                    CVQ       ++ W  Y +                  I 
Sbjct: 81  SLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIV 140

Query: 170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLV 228
           + FE  G  L     K S     +   + +  QL  S+A     LR  H DL   N+LL 
Sbjct: 141 LEFEFGGIDLEQMRTKLS----SLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLK 196

Query: 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPE 288
                K+  Y    +SS   S          + +ID+  +  E                +
Sbjct: 197 KTSLKKL-HYTLNGKSSTIPSC------GLQVSIIDYTLSRLERDGIVVFCDV--SMDED 247

Query: 289 VILGLGWNYPCDLWS 303
           +  G G +Y  D++ 
Sbjct: 248 LFTGDG-DYQFDIYR 261

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 67.6 bits (165), Expect = 2e-12
 Identities = 65/245 (26%), Positives = 103/245 (42%), Gaps = 42/245 (17%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 323

Query: 155 CVQIRNWFDY----RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
            VQ+     Y       I IV E +   SL DFL+  + +   +  + ++  Q+   +A+
Sbjct: 324 LVQL-----YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 378

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           +  +  +H DL+  NIL+      KV D  F L+R  +D  Y         IK       
Sbjct: 379 VERMNYVHRDLRAANILVGENLVCKVAD--FGLARLIEDNEYTARQGAKFPIKWT----- 431

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL 327
                            APE  L   +    D+WS G +L EL + G   +    N E L
Sbjct: 432 -----------------APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 474

Query: 328 AMMER 332
             +ER
Sbjct: 475 DQVER 479

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 67.4 bits (165), Expect = 2e-12
 Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 13/159 (8%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K+  K+G G FG+V     N+  + VA+K ++  +   EA + E +V++ L +HD    +
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAFLAEANVMKTL-QHD----K 244

Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            V++      +  I I+ E    G SL DFL+ +     P+  + +   Q+ E +AF+ +
Sbjct: 245 LVKLHAVV-TKEPIYIITEFMAKG-SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSY 250
              IH DL+  NIL+ ++   K+ D  F L+R  +D  Y
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIAD--FGLARVIEDNEY 339

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 66.0 bits (161), Expect = 4e-12
 Identities = 52/260 (20%), Positives = 85/260 (32%), Gaps = 54/260 (20%)

Query: 95  KILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---- 149
           K+L  +G G +G V +   D      VA+K+    N+        I  +  +  HD    
Sbjct: 16  KLLELIGRGRYGAVYKGSLDERP---VAVKVFSFANRQNFINEKNIYRVPLM-EHDNIAR 71

Query: 150 -IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
            I G      R   D R    +V E    G SL  +L  ++           L   +   
Sbjct: 72  FIVGD----ERVTADGRMEYLLVMEYYPNG-SLXKYLSLHT---SDWVSSCRLAHSVTRG 123

Query: 207 VAFMHE---------LRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPK 256
           +A++H            + H DL   N+L+ +     + D  F LS         +   +
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD--FGLSMRLTGNRLVRPGEE 181

Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-------GWNYPCDLWSVGCILV 309
            +A                   V T  Y APEV+ G              D++++G I  
Sbjct: 182 DNA---------------AISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYW 226

Query: 310 ELCSGEALFQTHENLEHLAM 329
           E+          E++    M
Sbjct: 227 EIFMRCTDLFPGESVPEYQM 246

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 64.3 bits (157), Expect = 1e-11
 Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)

Query: 95  KILSKMGEGTFGQVVEC----FDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARH 148
           K +  +GEG FG+V        ++   E+VA+K +++    ++R     EID+L+ L  H
Sbjct: 34  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YH 92

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
           +      G   C            + +V E   LG SL D+L ++S       L+    +
Sbjct: 93  EHIIKYKG--CCED-----AGAASLQLVMEYVPLG-SLRDYLPRHSIG--LAQLL-LFAQ 141

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGS--YFKNLPKSS 258
           Q+ E +A++H    IH DL   N+LL +   VK+ D  F L+++  +G   Y       S
Sbjct: 142 QICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGD--FGLAKAVPEGHEYYRVREDGDS 199

Query: 259 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEAL 317
            +                       + APE +    + Y  D+WS G  L EL +  ++ 
Sbjct: 200 PVF----------------------WYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSS 237

Query: 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDG 364
                    L  + +  G +    +        +   RG RL  PD 
Sbjct: 238 QSPPTKFLELIGIAQ--GQMTVLRLT-------ELLERGERLPRPDK 275

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 21/166 (12%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
            +  K+G G +G+V E    +    VA+K ++      E  + E  V++ + +H      
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQL 74

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           +G   C +            I+ E    G +L D+LR+ + +     ++  +  Q+  ++
Sbjct: 75  LG--VCTR-------EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAM 124

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFK 252
            ++ +   IH DL   N L+     VKV D  F LSR     +Y  
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVAD--FGLSRLMTGDTYTA 168

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 64.9 bits (158), Expect = 2e-11
 Identities = 59/252 (23%), Positives = 98/252 (38%), Gaps = 51/252 (20%)

Query: 95  KILSKMGEGTFGQVVE---CFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD 149
           ++   +GEG FG V +            VAIK  +  + +  RE  + E   +++   H 
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHP 451

Query: 150 -----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
                IG     +        N + I+ E   LG  L  FL+   +      L+     Q
Sbjct: 452 HIVKLIG--VITE--------NPVWIIMELCTLG-ELRSFLQVRKFSLDLASLI-LYAYQ 499

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIK 261
           L  ++A++   R +H D+   N+L+ S + VK+ D  F LSR  +D +Y+K       IK
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGD--FGLSRYMEDSTYYKASKGKLPIK 557

Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQT 320
            +                      APE I    +    D+W  G  + E+   G   FQ 
Sbjct: 558 WM----------------------APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595

Query: 321 HENLEHLAMMER 332
            +N + +  +E 
Sbjct: 596 VKNNDVIGRIEN 607

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 61.5 bits (150), Expect = 9e-11
 Identities = 60/256 (23%), Positives = 99/256 (38%), Gaps = 59/256 (23%)

Query: 95  KILSKMGEGTFGQVVE---CFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD 149
           ++   +GEG FG V +            VAIK  +  + +  RE  + E   +++   H 
Sbjct: 18  ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHP 76

Query: 150 IGGTRCVQIRNWFDY----RNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
                 V++           N + I+ E   LG  L  FL+   Y      L+     QL
Sbjct: 77  ----HIVKL-----IGVITENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLI-LYAYQL 125

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKL 262
             ++A++   R +H D+   N+L+ S + VK+ D  F LSR  +D +Y+K       IK 
Sbjct: 126 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGD--FGLSRYMEDSTYYKASKGKLPIKW 183

Query: 263 IDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNY-----PCDLWSVGCILVELCS-GEA 316
           +                      APE I     N+       D+W  G  + E+   G  
Sbjct: 184 M----------------------APESI-----NFRRFTSASDVWMFGVCMWEILMHGVK 216

Query: 317 LFQTHENLEHLAMMER 332
            FQ  +N + +  +E 
Sbjct: 217 PFQGVKNNDVIGRIEN 232

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 61.9 bits (151), Expect = 1e-10
 Identities = 41/166 (24%), Positives = 63/166 (37%), Gaps = 24/166 (14%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD--- 149
            +  ++G G FG+V          LVA+K  R       +   + E  +L++   H    
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIV 175

Query: 150 --IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
             IG   C Q       +  I IV E  + G     FLR    R     L+ ++      
Sbjct: 176 RLIG--VCTQ-------KQPIYIVMELVQGG-DFLTFLRTEGARLRVKTLL-QMVGDAAA 224

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSY 250
            + ++     IH DL   N L+     +K+ D  F +SR   DG Y
Sbjct: 225 GMEYLESKCCIHRDLAARNCLVTEKNVLKISD--FGMSREEADGVY 268

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 21/163 (12%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L +H     R
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQL-QHQ----R 69

Query: 155 CVQIRNWFDY----RNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
            V++     Y    +  I I+ E  + G SL DFL+  S     I+ + ++  Q+ E +A
Sbjct: 70  LVRL-----YAVVTQEPIYIITEYMENG-SLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSY 250
           F+ E   IH DL+  NIL+      K+ D  F L+R  +D  Y
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIAD--FGLARLIEDNEY 164

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 26/170 (15%)

Query: 95  KILSKMGEGTFGQVVE---CFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD 149
            +   +GEG FG+V E        +K  VA+K  +       +E  M E  +++ L  H 
Sbjct: 15  VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHP 73

Query: 150 IGGTRCVQIRNWFDY----RNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
                 V++               I+ E    G  L  +L +N      + LV     Q+
Sbjct: 74  ----HIVKL-----IGIIEEEPTWIIMELYPYG-ELGHYLERNKNSLKVLTLV-LYSLQI 122

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFK 252
            +++A++  +  +H D+   NIL+ S E VK+ D  F LSR  +D  Y+K
Sbjct: 123 CKAMAYLESINCVHRDIAVRNILVASPECVKLGD--FGLSRYIEDEDYYK 170

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 23/164 (14%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
             + ++G G FG V   +   K + VAIK +R      E  + E +V+ +L  H      
Sbjct: 11  TFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQL 68

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            G   C++       +  IC+V E  + G  L D+LR          L+  +   + E +
Sbjct: 69  YG--VCLE-------QAPICLVTEFMEHG-CLSDYLRTQRGLFAAETLL-GMCLDVCEGM 117

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSY 250
           A++ E  +IH DL   N L+   + +KV D  F ++R   D  Y
Sbjct: 118 AYLEEACVIHRDLAARNCLVGENQVIKVSD--FGMTRFVLDDQY 159

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 59.9 bits (146), Expect = 2e-10
 Identities = 56/252 (22%), Positives = 98/252 (38%), Gaps = 56/252 (22%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
            +L ++G G FG V       + + VA+K+++  +   +    E   + +L  H      
Sbjct: 11  TLLKELGSGQFGVVKLGKWKGQYD-VAVKMIKEGSMSEDEFFQEAQTMMKL-SHPKLVKF 68

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            G   C +          I IV E    G  L ++LR +     P  L+ E+   + E +
Sbjct: 69  YG--VCSK-------EYPIYIVTEYISNG-CLLNYLRSHGKGLEPSQLL-EMCYDVCEGM 117

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIKLIDFG 266
           AF+   + IH DL   N L+     VKV D  F ++R   D  Y  ++     +K     
Sbjct: 118 AFLESHQFIHRDLAARNCLVDRDLCVKVSD--FGMTRYVLDDQYVSSVGTKFPVK----- 170

Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLGWNY-----PCDLWSVGCILVELCS-GEALFQT 320
                            + APEV      +Y       D+W+ G ++ E+ S G+  +  
Sbjct: 171 -----------------WSAPEVF-----HYFKYSSKSDVWAFGILMWEVFSLGKMPYDL 208

Query: 321 HENLEHLAMMER 332
           + N E +  + +
Sbjct: 209 YTNSEVVLKVSQ 220

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 56/256 (21%), Positives = 98/256 (38%), Gaps = 66/256 (25%)

Query: 99  KMGEGTFGQVVE-CFDNEKKEL-VAIKIVR--SINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++G G FG V +  +   KK++ VAIK+++  +     E  M E  ++ +L  +      
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNP----Y 71

Query: 155 CVQIRNWFDY----RNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
            V++             + +V E    G  L+ FL          ++  EL  Q+   + 
Sbjct: 72  IVRL-----IGVCQAEALMLVMEMAGGG-PLHKFLVGKREEIPVSNVA-ELLHQVSMGMK 124

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++ E   +H DL   N+LLV+  Y K+                            DFG +
Sbjct: 125 YLEEKNFVHRDLAARNVLLVNRHYAKIS---------------------------DFGLS 157

Query: 269 TFEHQDHSYVVSTRHYR------APEVILGLGWNY-----PCDLWSVGCILVELCS-GEA 316
                D SY  +    +      APE I     N+       D+WS G  + E  S G+ 
Sbjct: 158 KALGADDSYYTARSAGKWPLKWYAPECI-----NFRKFSSRSDVWSYGVTMWEALSYGQK 212

Query: 317 LFQTHENLEHLAMMER 332
            ++  +  E +A +E+
Sbjct: 213 PYKKMKGPEVMAFIEQ 228

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 59.6 bits (145), Expect = 5e-10
 Identities = 36/170 (21%), Positives = 76/170 (44%), Gaps = 29/170 (17%)

Query: 95  KILSKMGEGTFGQVVECF---DNEKKEL-VAIKIVR--SINKYREAAMIEIDVLQRLARH 148
           K +  +G G FG V +     + EK ++ VAIK +R  +  K  +  + E  V+  +  +
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DN 76

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
                 +G   C+         + + ++ +    G  L D++R++        L+     
Sbjct: 77  PHVCRLLG--ICLT--------STVQLITQLMPFG-CLLDYVREHKDNIGSQYLL-NWCV 124

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSY 250
           Q+ + + ++ + RL+H DL   N+L+ + ++VK+ D  F L++       
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITD--FGLAKLLGAEEK 172

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 59.2 bits (144), Expect = 6e-10
 Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 28/163 (17%)

Query: 95  KILSKMGEGTFGQVVE---CFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLAR 147
           ++L K+G+G+FG V        + K   VA+K ++    S  +  +  + E++ +  L  
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-D 79

Query: 148 HDIGGTRCVQIRNWFDY----RNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
           H       +++     Y       + +V E   LG SL D LRK+        L      
Sbjct: 80  HR----NLIRL-----YGVVLTPPMKMVTELAPLG-SLLDRLRKHQGHFLLGTLS-RYAV 128

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSR 243
           Q+ E + ++   R IH DL   N+LL + + VK+ D  F L R
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGD--FGLMR 169

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 58.8 bits (143), Expect = 6e-10
 Identities = 58/261 (22%), Positives = 96/261 (36%), Gaps = 61/261 (23%)

Query: 95  KILSKMGEGTFGQVVE-------CFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLA 146
                +G+GTF ++ +        +    +  V +K++   +  Y E+      ++ +L 
Sbjct: 11  IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL- 69

Query: 147 RHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVREL 199
            H       G   CV         +   +V E  K G SL  +L+KN      +  + E+
Sbjct: 70  SHKHLVLNYG--VCVC-------GDENILVQEFVKFG-SLDTYLKKNKNCINILWKL-EV 118

Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +QL  ++ F+ E  LIH ++  +NILL+  E  K  +  F                   
Sbjct: 119 AKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPF------------------- 159

Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYR------APEVIL-GLGWNYPCDLWSVGCILVELC 312
           IKL D G +         V+     +       PE I      N   D WS G  L E+C
Sbjct: 160 IKLSDPGIS-------ITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEIC 212

Query: 313 S-GEALFQTHENLEHLAMMER 332
           S G+      ++   L   E 
Sbjct: 213 SGGDKPLSALDSQRKLQFYED 233

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 58.4 bits (142), Expect = 9e-10
 Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 23/164 (14%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
             L ++G G FG V       + + VAIK+++  +   +  + E  V+  L  H+     
Sbjct: 27  TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKLVQL 84

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            G   C +       +  I I+ E    G  L ++LR+  +R     L+ E+ + + E++
Sbjct: 85  YG--VCTK-------QRPIFIITEYMANG-CLLNYLREMRHRFQTQQLL-EMCKDVCEAM 133

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSY 250
            ++   + +H DL   N L+     VKV D  F LSR   D  Y
Sbjct: 134 EYLESKQFLHRDLAARNCLVNDQGVVKVSD--FGLSRYVLDDEY 175

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 59.3 bits (144), Expect = 1e-09
 Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 23/169 (13%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           K+L  +G+G FG V+       K  VA+K +++ +   +A + E  V+ +L RH      
Sbjct: 196 KLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKN-DATAQAFLAEASVMTQL-RHSNLVQL 251

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           +G    V+       +  + IV E    G SL D+LR         D + +    + E++
Sbjct: 252 LG--VIVE------EKGGLYIVTEYMAKG-SLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 302

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLP 255
            ++     +H DL   N+L+      KV D  F L++ +        LP
Sbjct: 303 EYLEGNNFVHRDLAARNVLVSEDNVAKVSD--FGLTKEASSTQDTGKLP 349

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 59.2 bits (143), Expect = 1e-09
 Identities = 68/346 (19%), Positives = 114/346 (32%), Gaps = 73/346 (21%)

Query: 10  PHKNMDKRPRKRPRLTWDVPPPLPPPKVLPA-LYCVQEFGNGGMPNYACSSMFYGAIPRT 68
                       P     +  P      L +  Y  +              M        
Sbjct: 259 ASNASGAAAPTLPAHPSTLTHPQRRIDTLNSDGYTPEPARITSPDKPRPMPMDTSVFESP 318

Query: 69  GSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVE-CFDNEKKEL-VAIKIVR 126
            S P    DK    +F   +NL      L   G G FG V +  +   KK++ VAIK+++
Sbjct: 319 FSDPEELKDKK---LFLKRDNLLIADIEL---GCGNFGSVRQGVYRMRKKQIDVAIKVLK 372

Query: 127 --SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY----RNHICIVFE--KLGPS 178
             +     E  M E  ++ +L  +       V++             + +V E    G  
Sbjct: 373 QGTEKADTEEMMREAQIMHQL-DNP----YIVRL-----IGVCQAEALMLVMEMAGGG-P 421

Query: 179 LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           L+ FL          ++  EL  Q+   + ++ E   +H +L   N+LLV+  Y K+   
Sbjct: 422 LHKFLVGKREEIPVSNVA-ELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKIS-- 478

Query: 239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYR------APEVILG 292
                                    DFG +     D SY  +    +      APE I  
Sbjct: 479 -------------------------DFGLSKALGADDSYYTARSAGKWPLKWYAPECI-- 511

Query: 293 LGWNY-----PCDLWSVGCILVELCS-GEALFQTHENLEHLAMMER 332
              N+       D+WS G  + E  S G+  ++  +  E +A +E+
Sbjct: 512 ---NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 554

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 63/268 (23%), Positives = 107/268 (39%), Gaps = 71/268 (26%)

Query: 88  ENLTPRCKILSKMGEGTFGQVVE-CFDNEKKEL-VAIKIVR---SINKYREAAMIEIDVL 142
           + LT   K L   G G FG V +  +  +K    VA+KI++   +    ++  + E +V+
Sbjct: 16  KLLTLEDKEL---GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 72

Query: 143 QRLARHDIGGTRCVQIRNWFDY----RNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLV 196
           Q+L  +       V++               +V E  +LG  L  +L++N  R      +
Sbjct: 73  QQL-DNP----YIVRM-----IGICEAESWMLVMEMAELG-PLNKYLQQN--RHVKDKNI 119

Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256
            EL  Q+   + ++ E   +H DL   N+LLV+  Y K+                     
Sbjct: 120 IELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS-------------------- 159

Query: 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYR------APEVILGLGWNY-----PCDLWSVG 305
                  DFG +     D +Y  +  H +      APE I     NY       D+WS G
Sbjct: 160 -------DFGLSKALRADENYYKAQTHGKWPVKWYAPECI-----NYYKFSSKSDVWSFG 207

Query: 306 CILVELCS-GEALFQTHENLEHLAMMER 332
            ++ E  S G+  ++  +  E  AM+E+
Sbjct: 208 VLMWEAFSYGQKPYRGMKGSEVTAMLEK 235

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 54/263 (20%), Positives = 93/263 (35%), Gaps = 70/263 (26%)

Query: 95  KILSKMGEGTFGQVVE---CFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD 149
            I   +G G  G+V         ++   VAIK ++     + R   + E  ++ +   H 
Sbjct: 52  HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-DHP 110

Query: 150 -----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
                 G     +            IV E  + G SL  FLR +  +   + LV  + R 
Sbjct: 111 NIIRLEG--VVTR-------GRLAMIVTEYMENG-SLDTFLRTHDGQFTIMQLV-GMLRG 159

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIK 261
           +   + ++ +L  +H DL   N+L+ S    KV D  F LSR  +D              
Sbjct: 160 VGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSD--FGLSRVLEDDPD----------- 206

Query: 262 LIDFGSTTFEHQDHSYVVSTRHYR------APEVILGLGWNY-----PCDLWSVGCILVE 310
                             +T   +      APE I      +       D+WS G ++ E
Sbjct: 207 ---------------AAYTTTGGKIPIRWTAPEAI-----AFRTFSSASDVWSFGVVMWE 246

Query: 311 LCS-GEALFQTHENLEHLAMMER 332
           + + GE  +    N + ++ +E 
Sbjct: 247 VLAYGERPYWNMTNRDVISSVEE 269

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 57.5 bits (139), Expect = 3e-09
 Identities = 47/256 (18%), Positives = 81/256 (31%), Gaps = 30/256 (11%)

Query: 14  MDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPW 73
           M        R    V   +  P+  P L  +          Y  +           +   
Sbjct: 7   MGHHHHHHGRRRASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGANTVHI 66

Query: 74  RPDDKDGHYVFAIGENLTPR----CKILSKMGEGTFGQVVECF---DNEKKELVAIKIVR 126
                +   V A+   +             +G G FG V       ++ KK   A+K + 
Sbjct: 67  DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 126

Query: 127 SINKYREAA--MIEIDVLQRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGP 177
            I    E +  + E  +++    H      +G                  +V    K G 
Sbjct: 127 RITDIGEVSQFLTEGIIMKDF-SHPNVLSLLG---IC-----LRSEGSPLVVLPYMKHG- 176

Query: 178 SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            L +F+R  ++     DL+   G Q+ + + F+   + +H DL   N +L     VKV D
Sbjct: 177 DLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD 235

Query: 238 YKF-LSRSSKDGSYFK 252
             F L+R   D  +  
Sbjct: 236 --FGLARDMYDKEFDS 249

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 57.0 bits (138), Expect = 4e-09
 Identities = 60/263 (22%), Positives = 97/263 (36%), Gaps = 70/263 (26%)

Query: 95  KILSKMGEGTFGQVVE---CFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD 149
            I   +G G FG+V        ++K+  VAIK ++     K R   + E  ++ +   H 
Sbjct: 48  SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHP 106

Query: 150 -----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
                 G     +          + IV E  + G SL  FLRK+  +   I LV  + R 
Sbjct: 107 NIIRLEG--VVTK-------SKPVMIVTEYMENG-SLDSFLRKHDAQFTVIQLV-GMLRG 155

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSAIK 261
           +   + ++ ++  +H DL   NIL+ S    KV D  F L R  +D              
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD--FGLGRVLEDDPE----------- 202

Query: 262 LIDFGSTTFEHQDHSYVVSTRHYR------APEVILGLGWNY-----PCDLWSVGCILVE 310
                             +TR  +      +PE I      Y       D+WS G +L E
Sbjct: 203 ---------------AAYTTRGGKIPIRWTSPEAI-----AYRKFTSASDVWSYGIVLWE 242

Query: 311 LCS-GEALFQTHENLEHLAMMER 332
           + S GE  +    N + +  ++ 
Sbjct: 243 VMSYGERPYWEMSNQDVIKAVDE 265

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 56.5 bits (137), Expect = 4e-09
 Identities = 40/178 (22%), Positives = 68/178 (38%), Gaps = 26/178 (14%)

Query: 95  KILSKMGEGTFGQVVECF---DNEKKELVAIKIVRSINKYREAA--MIEIDVLQRLARHD 149
                +G G FG V       ++ KK   A+K +  I    E +  + E  +++    H 
Sbjct: 28  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHP 86

Query: 150 -----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
                +G                  +V    K G  L +F+R  ++     DL+   G Q
Sbjct: 87  NVLSLLG---IC-----LRSEGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLIG-FGLQ 136

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSA 259
           + + + ++   + +H DL   N +L     VKV D  F L+R   D  Y+    K+ A
Sbjct: 137 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD--FGLARDMYDKEYYSVHNKTGA 192

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 55.3 bits (134), Expect = 8e-09
 Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 23/169 (13%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           K+L  +G+G FG V+       K  VA+K +++ +   +A + E  V+ +L RH      
Sbjct: 24  KLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKN-DATAQAFLAEASVMTQL-RHSNLVQL 79

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           +G    +      + +  + IV E    G SL D+LR         D + +    + E++
Sbjct: 80  LG---VI-----VEEKGGLYIVTEYMAKG-SLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 130

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLP 255
            ++     +H DL   N+L+      KV D  F L++ +        LP
Sbjct: 131 EYLEGNNFVHRDLAARNVLVSEDNVAKVSD--FGLTKEASSTQDTGKLP 177

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 55.7 bits (135), Expect = 1e-08
 Identities = 41/190 (21%), Positives = 71/190 (37%), Gaps = 41/190 (21%)

Query: 92  PRCKI--LSKMGEGTFGQVVEC-----FDNEKKELVAIKIVR--SINKYREAAMIEIDVL 142
           PR  +     +G G FG+VVE         +    VA+K+++  +    +EA M E+ ++
Sbjct: 44  PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIM 103

Query: 143 QRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDL 195
             L +H+     +G   C            + ++ E    G  L +FLR+ S        
Sbjct: 104 SHLGQHENIVNLLGA--CTH-------GGPVLVITEYCCYG-DLLNFLRRKSRVLETDPA 153

Query: 196 VRELGRQLLES------------VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LS 242
                                  +AF+     IH D+   N+LL +    K+ D  F L+
Sbjct: 154 FAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGD--FGLA 211

Query: 243 RSSKDGSYFK 252
           R   + S + 
Sbjct: 212 RDIMNDSNYI 221

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 29/170 (17%)

Query: 95  KILSKMGEGTFGQVVECF---DNEKKEL-VAIKIVR--SINKYREAAMIEIDVLQRLARH 148
           + L  +G G FG V +     + E  ++ V IK++   S  +  +A    +  +  L  H
Sbjct: 16  RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-DH 74

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
                 +G   C          + + +V +   LG SL D +R++     P  L+   G 
Sbjct: 75  AHIVRLLG--LCPG--------SSLQLVTQYLPLG-SLLDHVRQHRGALGPQLLL-NWGV 122

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSY 250
           Q+ + + ++ E  ++H +L   N+LL S   V+V D  F ++        
Sbjct: 123 QIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVAD--FGVADLLPPDDK 170

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 36/170 (21%), Positives = 76/170 (44%), Gaps = 29/170 (17%)

Query: 95  KILSKMGEGTFGQVVECF---DNEKKEL-VAIKIVR--SINKYREAAMIEIDVLQRLARH 148
           K +  +G G FG V +     + EK ++ VAIK +R  +  K  +  + E  V+  +  +
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DN 76

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
                 +G   C+         + + ++ +    G  L D++R++        L+     
Sbjct: 77  PHVCRLLG--ICLT--------STVQLITQLMPFG-CLLDYVREHKDNIGSQYLL-NWCV 124

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSY 250
           Q+ + + ++ + RL+H DL   N+L+ + ++VK+ D  F L++       
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITD--FGLAKLLGAEEK 172

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 46/194 (23%), Positives = 71/194 (36%), Gaps = 45/194 (23%)

Query: 92  PRCKI--LSKMGEGTFGQVVEC-----FDNEKKELVAIKIVR--SINKYREAAMIEIDVL 142
           PR ++     +G G FG+VVE        ++    VA+K+++  +    REA M E+ VL
Sbjct: 21  PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 80

Query: 143 QRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDL 195
             L  H      +G   C              ++ E    G  L +FLR+          
Sbjct: 81  SYLGNHMNIVNLLG--ACTI-------GGPTLVITEYCCYG-DLLNFLRRKRDSFICSKT 130

Query: 196 VRELGRQLLESV----------------AFMHELRLIHTDLKPENILLVSAEYVKVPDYK 239
              +      ++                AF+     IH DL   NILL      K+ D  
Sbjct: 131 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD-- 188

Query: 240 F-LSRSSKDGSYFK 252
           F L+R  K+ S + 
Sbjct: 189 FGLARDIKNDSNYV 202

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 28/170 (16%)

Query: 95  KILSKMGEGTFGQVVE----CFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH 148
                +G G FG+V +        +K+  VAIK ++     K R   + E  ++ +   H
Sbjct: 47  TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SH 105

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
                  G     +          + I+ E  + G +L  FLR+       + LV  + R
Sbjct: 106 HNIIRLEG--VISK-------YKPMMIITEYMENG-ALDKFLREKDGEFSVLQLV-GMLR 154

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSY 250
            +   + ++  +  +H DL   NIL+ S    KV D  F LSR  +D   
Sbjct: 155 GIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSD--FGLSRVLEDDPE 202

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 52.7 bits (127), Expect = 9e-08
 Identities = 45/177 (25%), Positives = 69/177 (38%), Gaps = 38/177 (21%)

Query: 95  KILSKMGEGTFGQVVECF--DNEKKELVAIKIVRSINKYREAA--MIEIDVLQRLARHD- 149
           K    +GEG FGQV++     +  +   AIK ++      +      E++VL +L  H  
Sbjct: 28  KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 87

Query: 150 ----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELG--- 200
               +G   C         R ++ +  E    G +L DFLRK+                 
Sbjct: 88  IINLLG--ACEH-------RGYLYLAIEYAPHG-NLLDFLRKSRVLETDPAFAIANSTAS 137

Query: 201 ----RQLLE---SVA----FMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSS 245
               +QLL     VA    ++ + + IH DL   NIL+      K+ D  F LSR  
Sbjct: 138 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIAD--FGLSRGQ 192

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 40/283 (14%), Positives = 65/283 (22%), Gaps = 81/283 (28%)

Query: 66  PRTGSPPWRPDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIV 125
             + +PP       G  +         R ++L   G     Q  +  D      VA+  V
Sbjct: 11  RESSAPPDDVQLVPGARI------ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFV 64

Query: 126 RSINK---------YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL- 175
                                      RL+R  I      ++ +    R    +V E + 
Sbjct: 65  DPQGVLPDDVLQETLSRT--------LRLSR--IDKPGVARVLDVVHTRAGGLVVAEWIR 114

Query: 176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 235
           G SL +          P+  +R   + L  +    H   +  +   P  + +        
Sbjct: 115 GGSLQEVADT---SPSPVGAIR-AMQSLAAAADAAHRAGVALSIDHPSRVRV-------- 162

Query: 236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGW 295
                    S DG           + L                                 
Sbjct: 163 ---------SIDG----------DVVLAYPA-----------------TMPDA------- 179

Query: 296 NYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLP 338
           N   D+  +G  L  L               LA  ER     P
Sbjct: 180 NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQP 222

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 41/192 (21%), Positives = 68/192 (35%), Gaps = 42/192 (21%)

Query: 92  PRCKI--LSKMGEGTFGQVVECF-----DNEKKELVAIKIVRSINKYREAA--MIEIDVL 142
           PR ++     +G G FGQV+E              VA+K+++    + E    M E+ +L
Sbjct: 25  PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 84

Query: 143 QRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDL 195
             +  H      +G                + ++ E  K G +L  +LR       P  +
Sbjct: 85  IHIGHHLNVVNLLG---AC-----TKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKV 135

Query: 196 VRELGRQLLESV--------------AFMHELRLIHTDLKPENILLVSAEYVKVPDYKF- 240
             E   +   ++               F+   + IH DL   NILL     VK+ D  F 
Sbjct: 136 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD--FG 193

Query: 241 LSRSSKDGSYFK 252
           L+R       + 
Sbjct: 194 LARDIYKDPDYV 205

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 50.8 bits (122), Expect = 4e-07
 Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 27/181 (14%)

Query: 92  PRCKI--LSKMGEGTFGQVVECF---DNEKKELVAIKIVR---SINKYREAAMIEIDVLQ 143
           P  +      +G+G FG V E     ++     VA+K+++     +   E  + E   ++
Sbjct: 21  PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMK 80

Query: 144 RLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDL- 195
               H      +G                  ++    K G  L+ FL  +     P +L 
Sbjct: 81  EF-DHPHVAKLVG---VSLRSRAKGRLPIPMVILPFMKHG-DLHAFLLASRIGENPFNLP 135

Query: 196 VREL---GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYF 251
           ++ L      +   + ++     IH DL   N +L     V V D  F LSR    G Y+
Sbjct: 136 LQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVAD--FGLSRKIYSGDYY 193

Query: 252 K 252
           +
Sbjct: 194 R 194

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 50.8 bits (122), Expect = 4e-07
 Identities = 38/185 (20%), Positives = 68/185 (36%), Gaps = 36/185 (19%)

Query: 92  PRCKI--LSKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKYREAA--MIEIDVL 142
            R KI    ++G+G+FG V E        +E +  VAIK V      RE    + E  V+
Sbjct: 23  AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82

Query: 143 QRLARHDIGGTR----CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLV 196
           +    H +   R      Q            ++ E    G  L  +LR          ++
Sbjct: 83  KEFNCHHV--VRLLGVVSQ-------GQPTLVIMELMTRG-DLKSYLRSLRPAMANNPVL 132

Query: 197 RELGRQLLESVA--------FMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKD 247
                  +  +A        +++  + +H DL   N ++     VK+ D  F ++R   +
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD--FGMTRDIYE 190

Query: 248 GSYFK 252
             Y++
Sbjct: 191 TDYYR 195

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 49.6 bits (119), Expect = 7e-07
 Identities = 38/178 (21%), Positives = 65/178 (36%), Gaps = 26/178 (14%)

Query: 95  KILSKMGEGTFGQVVECF---DNEKKELVAIKIVRSINKYREAA--MIEIDVLQRLARHD 149
                +G+G FG V         + +   AIK +  I + ++    + E  +++ L  H 
Sbjct: 24  HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHP 82

Query: 150 -----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
                IG    +             ++      G  L  F+R         DL+   G Q
Sbjct: 83  NVLALIG---IM-----LPPEGLPHVLLPYMCHG-DLLQFIRSPQRNPTVKDLI-SFGLQ 132

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYFKNLPKSSA 259
           +   + ++ E + +H DL   N +L  +  VKV D  F L+R   D  Y+       A
Sbjct: 133 VARGMEYLAEQKFVHRDLAARNCMLDESFTVKVAD--FGLARDILDREYYSVQQHRHA 188

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.6 bits (120), Expect = 7e-07
 Identities = 63/510 (12%), Positives = 133/510 (26%), Gaps = 160/510 (31%)

Query: 10  PHKNMDKRPRKRPRLTWDVPPPLPP------PKVLP---ALYCVQE------FGNGG--- 51
           P         +R RL ++                L    AL  ++        G  G   
Sbjct: 105 PSMMTRMYIEQRDRL-YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK 163

Query: 52  --MPNYACSS-----MFYGAIPRTGSPPW-------RPDDKDGHYVFAIGENLTPRCKIL 97
             +    C S          I       W        P+      V  + + L      +
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIF------WLNLKNCNSPET-----VLEMLQKL---LYQI 209

Query: 98  SKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGT 153
                  +    +   N K  + +I+           Y    ++ +         ++   
Sbjct: 210 DPN----WTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV-LL--------NVQNA 256

Query: 154 RCVQIRNWFDYRNHIC-IVFEKLGPSLYDFLRKNSYRSFPID-----LVRELGRQLLESV 207
           +       F+     C I+       + DFL   +     +D     L  +  + LL   
Sbjct: 257 KAWNA---FNLS---CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY 310

Query: 208 AFMHELRLIHTDLKPE----NILLVS--AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
                L     DL  E    N   +S  AE ++      L+        +K++       
Sbjct: 311 -----LDCRPQDLPREVLTTNPRRLSIIAESIR----DGLATWD----NWKHVNCDKLTT 357

Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRA----------PEVILGLGWNYPCDLWSVGCILVEL 311
           +I+   ++    + +     + +            P ++L L W        V  ++ +L
Sbjct: 358 IIE---SSLNVLEPAEY--RKMFDRLSVFPPSAHIPTILLSLIWFDV-IKSDVMVVVNKL 411

Query: 312 CSGEAL---------------FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRG 356
                +                +    LE+   +        H  ++      + +    
Sbjct: 412 HKYSLVEKQPKESTISIPSIYLELKVKLENEYAL--------HRSIVDHYNIPKTFDSDD 463

Query: 357 ARLDWPDG-----------ATSRDSMRAVWKLLRLPNL--IMQHVDHS------AGDLID 397
               + D                     +++++ L +   + Q + H       +G +++
Sbjct: 464 LIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL-DFRFLEQKIRHDSTAWNASGSILN 522

Query: 398 LLQGLLRYDPAERLKAREALRHPFFTRDVR 427
            LQ L  Y      K       P + R V 
Sbjct: 523 TLQQLKFY------KPYICDNDPKYERLVN 546

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 50.1 bits (120), Expect = 8e-07
 Identities = 37/194 (19%), Positives = 75/194 (38%), Gaps = 45/194 (23%)

Query: 92  PRCKI--LSKMGEGTFGQVVEC-------FDNEKKELVAIKIVRSINKYREAA--MIEID 140
           PR ++     +GEG FGQVV             +   VA+K+++S    ++ +  + E++
Sbjct: 67  PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 126

Query: 141 VLQRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPI 193
           +++ + +H      +G   C Q          + ++ E    G +L ++L+         
Sbjct: 127 MMKMIGKHKNIINLLG--ACTQ-------DGPLYVIVEYASKG-NLREYLQARRPPGLEY 176

Query: 194 DLVRELG-------RQLLESV-------AFMHELRLIHTDLKPENILLVSAEYVKVPDYK 239
                         + L+           ++   + IH DL   N+L+     +K+ D  
Sbjct: 177 SYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIAD-- 234

Query: 240 F-LSRSSKDGSYFK 252
           F L+R      Y+K
Sbjct: 235 FGLARDIHHIDYYK 248

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 37/181 (20%), Positives = 68/181 (37%), Gaps = 28/181 (15%)

Query: 92  PRCKI--LSKMGEGTFGQVVECF---DNEKKELVAIKIVRSIN---KYREAAMIEIDVLQ 143
            R  +     +GEG FG V+E     ++     VA+K ++  N   +  E  + E   ++
Sbjct: 32  DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMK 91

Query: 144 RLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDL- 195
               H      +G    V I           ++    K G  L+ +L  +   + P  + 
Sbjct: 92  DF-SHPNVIRLLG----VCIEMSSQGIPKPMVILPFMKYG-DLHTYLLYSRLETGPKHIP 145

Query: 196 VREL---GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-LSRSSKDGSYF 251
           ++ L      +   + ++     +H DL   N +L     V V D  F LS+    G Y+
Sbjct: 146 LQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVAD--FGLSKKIYSGDYY 203

Query: 252 K 252
           +
Sbjct: 204 R 204

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 43/200 (21%), Positives = 74/200 (37%), Gaps = 52/200 (26%)

Query: 92  PRCKI--LSKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSI--NKYREAAMIEIDVL 142
           PR  +     +G G FG+V+               VA+K+++    +  REA M E+ ++
Sbjct: 43  PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMM 102

Query: 143 QRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDL 195
            +L  H+     +G   C            I ++FE    G  L ++LR    +    ++
Sbjct: 103 TQLGSHENIVNLLGA--CTL-------SGPIYLIFEYCCYG-DLLNYLRSKREKFSEDEI 152

Query: 196 VRELGRQLLESV---------------------AFMHELRLIHTDLKPENILLVSAEYV- 233
             E  ++L E                        F+     +H DL   N+ LV+   V 
Sbjct: 153 EYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNV-LVTHGKVV 211

Query: 234 KVPDYKF-LSRSSKDGSYFK 252
           K+ D  F L+R     S + 
Sbjct: 212 KICD--FGLARDIMSDSNYV 229

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 42/190 (22%), Positives = 70/190 (36%), Gaps = 42/190 (22%)

Query: 92  PRCKI--LSKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQ 143
            R  I    ++GEG FG+V           + K LVA+K ++  +   R+    E ++L 
Sbjct: 39  KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLT 98

Query: 144 RLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLV 196
            L +H       G   C +          + +VFE  + G  L  FLR +   +  +   
Sbjct: 99  ML-QHQHIVRFFG--VCTE-------GRPLLMVFEYMRHG-DLNRFLRSHGPDAKLLAGG 147

Query: 197 RELGRQLLESVAFMH-------------ELRLIHTDLKPENILLVSAEYVKVPDYKF-LS 242
            ++    L     +               L  +H DL   N L+     VK+ D  F +S
Sbjct: 148 EDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGD--FGMS 205

Query: 243 RSSKDGSYFK 252
           R      Y++
Sbjct: 206 RDIYSTDYYR 215

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 48.1 bits (115), Expect = 3e-06
 Identities = 41/194 (21%), Positives = 81/194 (41%), Gaps = 45/194 (23%)

Query: 92  PRCKI--LSKMGEGTFGQVVEC-------FDNEKKELVAIKIVRSINKYREAA--MIEID 140
           PR K+     +GEG FGQVV            ++   VA+K+++     ++ +  + E++
Sbjct: 79  PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEME 138

Query: 141 VLQRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNS--YRSF 191
           +++ + +H      +G   C Q          + ++ E    G +L ++LR        +
Sbjct: 139 MMKMIGKHKNIINLLG--ACTQ-------DGPLYVIVEYASKG-NLREYLRARRPPGMEY 188

Query: 192 PIDLVRELGRQLLES--------VA----FMHELRLIHTDLKPENILLVSAEYVKVPDYK 239
             D+ R    Q+           +A    ++   + IH DL   N+L+     +K+ D  
Sbjct: 189 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIAD-- 246

Query: 240 F-LSRSSKDGSYFK 252
           F L+R   +  Y+K
Sbjct: 247 FGLARDINNIDYYK 260

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 48.1 bits (115), Expect = 3e-06
 Identities = 38/194 (19%), Positives = 76/194 (39%), Gaps = 45/194 (23%)

Query: 92  PRCKI--LSKMGEGTFGQVVEC-------FDNEKKELVAIKIVRSINKYREAA--MIEID 140
           PR K+     +GEG FGQVV            ++   VA+K+++     ++ +  + E++
Sbjct: 33  PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEME 92

Query: 141 VLQRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPI 193
           +++ + +H      +G   C Q          + ++ E    G +L ++LR         
Sbjct: 93  MMKMIGKHKNIINLLG--ACTQ-------DGPLYVIVEYASKG-NLREYLRARRPPGMEY 142

Query: 194 DLVRELG-------RQLLESV-------AFMHELRLIHTDLKPENILLVSAEYVKVPDYK 239
                         + L+           ++   + IH DL   N+L+     +K+ D  
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIAD-- 200

Query: 240 F-LSRSSKDGSYFK 252
           F L+R   +  Y+K
Sbjct: 201 FGLARDINNIDYYK 214

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 46.0 bits (110), Expect = 1e-05
 Identities = 37/192 (19%), Positives = 67/192 (34%), Gaps = 44/192 (22%)

Query: 92  PRCKI--LSKMGEGTFGQVVEC-----FDNEKKELVAIKIVR--SINKYREAAMIEIDVL 142
               +  + ++GE  FG+V +         E+ + VAIK ++  +    RE    E  + 
Sbjct: 7   SLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLR 66

Query: 143 QRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDL 195
            RL +H      +G     +          + ++F     G  L++FL   S  S     
Sbjct: 67  ARL-QHPNVVCLLG--VVTK-------DQPLSMIFSYCSHG-DLHEFLVMRSPHSDVGST 115

Query: 196 VRELG-------RQLLESV-------AFMHELRLIHTDLKPENILLVSAEYVKVPDYKF- 240
             +            +  V        ++    ++H DL   N+L+     VK+ D    
Sbjct: 116 DDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISD--LG 173

Query: 241 LSRSSKDGSYFK 252
           L R      Y+K
Sbjct: 174 LFREVYAADYYK 185

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 42/191 (21%), Positives = 70/191 (36%), Gaps = 43/191 (22%)

Query: 92  PRCKI--LSKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKYREAA-MIEIDVLQ 143
            R  I    ++GEG FG+V           + K LVA+K ++            E ++L 
Sbjct: 13  KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLT 72

Query: 144 RLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLV 196
            L +H+      G   C          + + +VFE  K G  L  FLR +   +  +   
Sbjct: 73  NL-QHEHIVKFYG--VCGD-------GDPLIMVFEYMKHG-DLNKFLRAHGPDAMILVDG 121

Query: 197 RELGR-------QLLESV-------AFMHELRLIHTDLKPENILLVSAEYVKVPDYKF-L 241
           +           Q+L           ++     +H DL   N L+ +   VK+ D  F +
Sbjct: 122 QPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGD--FGM 179

Query: 242 SRSSKDGSYFK 252
           SR      Y++
Sbjct: 180 SRDVYSTDYYR 190

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 44.2 bits (105), Expect = 4e-05
 Identities = 47/227 (20%), Positives = 77/227 (33%), Gaps = 61/227 (26%)

Query: 66  PRTGSPPWRPDDKDGHYVFAIGENLTPRCKI--LSKMGEGTFGQVVEC-----FDNEKKE 118
           P     P   + K     +       PR  I  +  +GEG FG+V +         E   
Sbjct: 26  PMYQRMPLLLNPKLLSLEY-------PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFT 78

Query: 119 LVAIKIVRSI--NKYREAAMIEIDVLQRLARHD-----IGGTRCVQIRNWFDYRNHICIV 171
           +VA+K+++       +     E  ++     +      +G   C            +C++
Sbjct: 79  MVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLG--VCAV-------GKPMCLL 128

Query: 172 FE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV---------------------- 207
           FE    G  L +FLR  S  +       +L  +   S                       
Sbjct: 129 FEYMAYG-DLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGM 187

Query: 208 AFMHELRLIHTDLKPENILLVSAEY-VKVPDYKF-LSRSSKDGSYFK 252
           A++ E + +H DL   N  LV     VK+ D  F LSR+     Y+K
Sbjct: 188 AYLSERKFVHRDLATRNC-LVGENMVVKIAD--FGLSRNIYSADYYK 231

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* Length = 258

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 21/130 (16%), Positives = 45/130 (34%), Gaps = 9/130 (6%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++    F ++ E    +++    ++ +    K       E   L+R       G    Q 
Sbjct: 83  RIETSEFDKMDEYLYGDER--FDMRRISPKEKVFIWTEKEFRNLERAKEA---GVSVPQP 137

Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIH 217
              + Y  ++ ++       L         R      V  +   ++E+V  ++ E  L+H
Sbjct: 138 ---YTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVH 194

Query: 218 TDLKPENILL 227
            DL   NI+ 
Sbjct: 195 ADLSEYNIMY 204

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 42/200 (21%), Positives = 70/200 (35%), Gaps = 52/200 (26%)

Query: 92  PRCKI--LSKMGEGTFGQVVECF-----DNEKKELVAIKIVRSINKYREAA--MIEIDVL 142
           PR  +     +GEG FG+VV+              VA+K+++      E    + E +VL
Sbjct: 21  PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVL 80

Query: 143 QRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDL 195
           +++  H       G   C Q          + ++ E  K G SL  FLR++         
Sbjct: 81  KQV-NHPHVIKLYGA--CSQ-------DGPLLLIVEYAKYG-SLRGFLRESRKVGPGYLG 129

Query: 196 VRELGRQLLESV----------------------AFMHELRLIHTDLKPENILLVSAEYV 233
                                              ++ E++L+H DL   NIL+     +
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKM 189

Query: 234 KVPDYKF-LSRSSKDGSYFK 252
           K+ D  F LSR   +   + 
Sbjct: 190 KISD--FGLSRDVYEEDSYV 207

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 41/187 (21%), Positives = 71/187 (37%), Gaps = 40/187 (21%)

Query: 92  PRCKI--LSKMGEGTFGQVVECF-----DNEKKELVAIKIVRSINKYREAA--MIEIDVL 142
           PR  I  +  +G G FG+V E       ++     VA+K +  +   ++    ++E  ++
Sbjct: 28  PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALII 87

Query: 143 QRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSF---- 191
            +   H      IG    +Q            I+ E    G  L  FLR+   R      
Sbjct: 88  SKF-NHQNIVRCIG--VSLQ-------SLPRFILMELMAGG-DLKSFLRETRPRPSQPSS 136

Query: 192 --PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY---VKVPDYKF-LSRSS 245
              +DL+  + R +     ++ E   IH D+   N LL         K+ D  F ++R  
Sbjct: 137 LAMLDLLH-VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD--FGMARDI 193

Query: 246 KDGSYFK 252
              SY++
Sbjct: 194 YRASYYR 200

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 40/187 (21%)

Query: 92  PRCKI--LSKMGEGTFGQVVECF-----DNEKKELVAIKIVRSINKYREAA--MIEIDVL 142
           PR  I  +  +G G FG+V E       ++     VA+K +  +   ++    ++E  ++
Sbjct: 69  PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALII 128

Query: 143 QRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSF---- 191
            +   H      IG    +Q            I+ E    G  L  FLR+   R      
Sbjct: 129 SKF-NHQNIVRCIG--VSLQ-------SLPRFILLELMAGG-DLKSFLRETRPRPSQPSS 177

Query: 192 --PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY---VKVPDYKF-LSRSS 245
              +DL+  + R +     ++ E   IH D+   N LL         K+ D  F ++R  
Sbjct: 178 LAMLDLLH-VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD--FGMARDI 234

Query: 246 KDGSYFK 252
               Y++
Sbjct: 235 YRAGYYR 241

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	438
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	100.0
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.95
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.93
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.89
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.8
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.38
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.26
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	99.16
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.13
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.8
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.74
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.56
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.42
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.35
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.23
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.22
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.19
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.95
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.85
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.67
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.67
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.58
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.58
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.51
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.48
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.35
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.31
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.28
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.96
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	96.94
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.79
3mes_A	424	Choline kinase; malaria, structural genomics, stru	96.22
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	95.37

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.3e-64  Score=473.42  Aligned_cols=250  Identities=27%  Similarity=0.382  Sum_probs=217.9

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++++.||+|+||+||+|+++.+|+.||||++++..    ...+.+.+|+.+|+.|+|+||     |+++++|++++.
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~l~~~~~~~~~  106 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF-----VKLYFTFQDDEK  106 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTB-----CCEEEEEECSSE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEEeCCE
Confidence            57999999999999999999999999999999997532    345678899999999988877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||||| ||+|.+++.+.+  .+++..++.|+.||+.||+|||++||+||||||+|||++.+|               
T Consensus       107 ~yivmEy~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g---------------  169 (311)
T 4aw0_A          107 LYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---------------  169 (311)
T ss_dssp             EEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS---------------
T ss_pred             EEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCC---------------
Confidence            99999999 999999998765  799999999999999999999999999999999999997665               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCC-----CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                  .+||+|||+|+....     ...+.+||+.|||||++.+..|+.++|||||||++|+|++|..||.+.
T Consensus       170 ------------~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~  237 (311)
T 4aw0_A          170 ------------HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG  237 (311)
T ss_dssp             ------------CEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ------------CEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                        567777777765422     123468999999999999999999999999999999999999999998


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +..+.+..|.+....+                                                  +..+++++++||.+
T Consensus       238 ~~~~~~~~i~~~~~~~--------------------------------------------------p~~~s~~~~dli~~  267 (311)
T 4aw0_A          238 NEGLIFAKIIKLEYDF--------------------------------------------------PEKFFPKARDLVEK  267 (311)
T ss_dssp             SHHHHHHHHHHTCCCC--------------------------------------------------CTTCCHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCC--------------------------------------------------CcccCHHHHHHHHH
Confidence            8877777665432222                                                  22457789999999


Q ss_pred             ccccCCCCCCCHHH------HhcCCCCCCC
Q 013678          402 LLRYDPAERLKARE------ALRHPFFTRD  425 (438)
Q Consensus       402 ~L~~dP~~Rpta~e------ll~hp~f~~~  425 (438)
                      ||+.||++|+|++|      |++||||++-
T Consensus       268 lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i  297 (311)
T 4aw0_A          268 LLVLDATKRLGCEEMEGYGPLKAHPFFESV  297 (311)
T ss_dssp             HSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             HccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence            99999999999988      5899999874

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=2.1e-64  Score=478.95  Aligned_cols=255  Identities=26%  Similarity=0.444  Sum_probs=219.3

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ...|+++++||+|+||+||+|+++.+|+.||||+++... ...+.+.+|+.+|+.++|+||     |+++++|++++.+|
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnI-----V~l~~~~~~~~~~~  147 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV-----VEMYNSYLVGDELW  147 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTB-----CCEEEEEEETTEEE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCC-----CcEEEEEEECCEEE
Confidence            356999999999999999999999999999999997533 344668899999999998887     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      |||||| ||+|.+++.+.   .+++..++.|+.||+.||+|||++|||||||||+||||+.+|                 
T Consensus       148 ivmEy~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g-----------------  207 (346)
T 4fih_A          148 VVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG-----------------  207 (346)
T ss_dssp             EEECCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-----------------
T ss_pred             EEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCC-----------------
Confidence            999999 99999999864   599999999999999999999999999999999999997665                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                .+||+|||+|+.....   ..+.+||+.|||||++.+..|+.++|||||||++|||++|..||.+.+..+
T Consensus       208 ----------~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~  277 (346)
T 4fih_A          208 ----------RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK  277 (346)
T ss_dssp             ----------CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             ----------CEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH
Confidence                      5677777777654322   345689999999999999999999999999999999999999999988877


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..+.....+.                                               ......+++++++||.+||+.
T Consensus       278 ~~~~i~~~~~~~-----------------------------------------------~~~~~~~s~~~~dli~~~L~~  310 (346)
T 4fih_A          278 AMKMIRDNLPPR-----------------------------------------------LKNLHKVSPSLKGFLDRLLVR  310 (346)
T ss_dssp             HHHHHHHSSCCC-----------------------------------------------CSCGGGSCHHHHHHHHHHSCS
T ss_pred             HHHHHHcCCCCC-----------------------------------------------CCccccCCHHHHHHHHHHcCC
Confidence            776664422110                                               011234578999999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      ||++|||++|+|+||||++...
T Consensus       311 dP~~R~ta~e~l~Hp~~~~~~~  332 (346)
T 4fih_A          311 DPAQRATAAELLKHPFLAKAGP  332 (346)
T ss_dssp             STTTSCCHHHHTTCGGGGGCCC
T ss_pred             ChhHCcCHHHHhcCHhhcCCCC
Confidence            9999999999999999997643

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1e-64  Score=481.79  Aligned_cols=255  Identities=25%  Similarity=0.412  Sum_probs=216.4

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ++|+++++||+|+||+||+|+++.+|+.||||++++.   ....+.+.+|+.+|+.|+|+||     |+++++|++++.+
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnI-----V~~~~~~~~~~~~   98 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI-----VQYRESFEENGSL   98 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEEETTEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCC-----CcEEEEEEECCEE
Confidence            6899999999999999999999999999999999753   3445778899999999998887     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      ||||||| ||+|.+++.......+++..++.|+.||+.||+|||++|||||||||+||||+.+|                
T Consensus        99 yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g----------------  162 (350)
T 4b9d_A           99 YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG----------------  162 (350)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTC----------------
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC----------------
Confidence            9999999 99999999877656789999999999999999999999999999999999997655                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                 .+||+|||+|+.....   ....+||+.|||||++.+..|+.++|||||||+||||++|+.||.+.+..
T Consensus       163 -----------~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~  231 (350)
T 4b9d_A          163 -----------TVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK  231 (350)
T ss_dssp             -----------CEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             -----------CEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH
Confidence                       5777888877765432   23468999999999999999999999999999999999999999998887


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +.+..+....  +|                                               .....+++++.+||.+||+
T Consensus       232 ~~~~~i~~~~--~~-----------------------------------------------~~~~~~s~~~~~li~~~L~  262 (350)
T 4b9d_A          232 NLVLKIISGS--FP-----------------------------------------------PVSLHYSYDLRSLVSQLFK  262 (350)
T ss_dssp             HHHHHHHHTC--CC-----------------------------------------------CCCTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHcCC--CC-----------------------------------------------CCCccCCHHHHHHHHHHcc
Confidence            7776665421  11                                               1123467899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      .||++|||++|+|+||||++...
T Consensus       263 ~dP~~R~s~~e~l~hp~~~~~~~  285 (350)
T 4b9d_A          263 RNPRDRPSVNSILEKGFIAKRIE  285 (350)
T ss_dssp             SSGGGSCCHHHHHTSHHHHTTGG
T ss_pred             CChhHCcCHHHHhcCHHhhcCCC
Confidence            99999999999999999987544

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=3.5e-64  Score=464.17  Aligned_cols=251  Identities=24%  Similarity=0.422  Sum_probs=205.9

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++++.||+|+||+||+|+++.+|+.||||++++..    ...+.+.+|+.+++.++|+||     |++++++++++.
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnI-----v~~~~~~~~~~~   87 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHI-----IKLYDVIKSKDE   87 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTB-----CCEEEEEECSSE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCC-----CeEEEEEEECCE
Confidence            57999999999999999999999999999999997532    334678899999999998887     999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      +|||||||+|+|.+++.+++  .+++..++.++.||+.||+|||++||+||||||+|||++.+|                
T Consensus        88 ~~ivmEy~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~----------------  149 (275)
T 3hyh_A           88 IIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHL----------------  149 (275)
T ss_dssp             EEEEEECCCEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTC----------------
T ss_pred             EEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCC----------------
Confidence            99999999999999998765  799999999999999999999999999999999999997655                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                 .+||+|||+|+.....  ..+.+||+.|||||++.+..+ +.++|||||||++|+|++|+.||.+.+..
T Consensus       150 -----------~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~  218 (275)
T 3hyh_A          150 -----------NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP  218 (275)
T ss_dssp             -----------CEEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             -----------CEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH
Confidence                       5777777777654332  234689999999999998876 58999999999999999999999987776


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      .....+......+                                                  +..+++++++||.+||+
T Consensus       219 ~~~~~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~~L~  248 (275)
T 3hyh_A          219 VLFKNISNGVYTL--------------------------------------------------PKFLSPGAAGLIKRMLI  248 (275)
T ss_dssp             HHHHHHHHTCCCC--------------------------------------------------CTTSCHHHHHHHHHHSC
T ss_pred             HHHHHHHcCCCCC--------------------------------------------------CCCCCHHHHHHHHHHcc
Confidence            6666554432211                                                  12457789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      .||++|||++|+++||||+.+.
T Consensus       249 ~dP~~R~s~~eil~hpw~k~~~  270 (275)
T 3hyh_A          249 VNPLNRISIHEIMQDDWFKVDL  270 (275)
T ss_dssp             SSGGGSCCHHHHHHCHHHHTTC
T ss_pred             CChhHCcCHHHHHcCcccccCC
Confidence            9999999999999999998764

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=5.5e-63  Score=480.46  Aligned_cols=254  Identities=26%  Similarity=0.447  Sum_probs=219.4

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      .+.|+++++||+|+||.||+|+++.+|+.||||++.... ...+.+.+|+.+|+.++|+||     |+++++|.+++.+|
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnI-----V~l~~~~~~~~~~~  224 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV-----VEMYNSYLVGDELW  224 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTB-----CCEEEEEEETTEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCC-----CceEEEEEECCEEE
Confidence            367999999999999999999999999999999997533 345668899999999998887     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      |||||| ||+|.+++...   .+++..++.|+.||+.||+|||++|||||||||+||||+.+|                 
T Consensus       225 iVmEy~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g-----------------  284 (423)
T 4fie_A          225 VVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG-----------------  284 (423)
T ss_dssp             EEEECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTC-----------------
T ss_pred             EEEeCCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCC-----------------
Confidence            999999 99999999764   599999999999999999999999999999999999997666                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                .+||+|||+|......   ....+||+.|||||++.+..|+.++|||||||++|||++|..||.+.+..+
T Consensus       285 ----------~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~  354 (423)
T 4fie_A          285 ----------RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK  354 (423)
T ss_dssp             ----------CEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             ----------CEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH
Confidence                      5677777777654322   345689999999999999999999999999999999999999999888877


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..+.....+.                                               ......+++++++||.+||+.
T Consensus       355 ~~~~i~~~~~~~-----------------------------------------------~~~~~~~s~~~~dli~~~L~~  387 (423)
T 4fie_A          355 AMKMIRDNLPPR-----------------------------------------------LKNLHKVSPSLKGFLDRLLVR  387 (423)
T ss_dssp             HHHHHHHSCCCC-----------------------------------------------CSCTTSSCHHHHHHHHHHSCS
T ss_pred             HHHHHHcCCCCC-----------------------------------------------CcccccCCHHHHHHHHHHcCC
Confidence            776664421110                                               012235678999999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~  426 (438)
                      ||++|||++|+|+||||++..
T Consensus       388 dP~~R~ta~ell~Hp~~~~~~  408 (423)
T 4fie_A          388 DPAQRATAAELLKHPFLAKAG  408 (423)
T ss_dssp             STTTSCCHHHHTTCGGGGGCC
T ss_pred             ChhHCcCHHHHhcCHHhcCCC
Confidence            999999999999999999764

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=4.3e-62  Score=454.17  Aligned_cols=255  Identities=23%  Similarity=0.408  Sum_probs=208.1

Q ss_pred             cCCce-EEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc-
Q 013678           90 LTPRC-KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-  164 (438)
Q Consensus        90 ~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-  164 (438)
                      ..+|| ++.++||+|+||+||+|.+..+++.||+|++...   ....+.+.+|+.+++.|+||||     |+++++|++ 
T Consensus        23 ~~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnI-----V~~~~~~~~~   97 (290)
T 3fpq_A           23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI-----VRFYDSWEST   97 (290)
T ss_dssp             TTSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEEEEE
T ss_pred             CCCceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCC-----CcEEEEEeec
Confidence            34565 7888999999999999999999999999999643   3345678899999999998887     999999864 


Q ss_pred             ---CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEecCcccccCCc
Q 013678          165 ---RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDY  238 (438)
Q Consensus       165 ---~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~kl~df  238 (438)
                         ++.+||||||| ||+|.+++.+..  .+++..++.|+.||+.||+|||++|  ||||||||+||||+.         
T Consensus        98 ~~~~~~~~lvmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~---------  166 (290)
T 3fpq_A           98 VKGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG---------  166 (290)
T ss_dssp             ETTEEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESS---------
T ss_pred             cCCCcEEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEEC---------
Confidence               45799999999 999999998765  7999999999999999999999999  999999999999963         


Q ss_pred             cccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       239 ~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                       .++.+||+|||+|+..... ..+.+||+.|||||++.+ .|+.++|||||||+||||+||+.|
T Consensus       167 -----------------~~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~P  228 (290)
T 3fpq_A          167 -----------------PTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYP  228 (290)
T ss_dssp             -----------------TTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             -----------------CCCCEEEEeCcCCEeCCCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCC
Confidence                             1235788888887654433 334689999999998865 699999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+.+....+...... +..|.                                              ......++++.+
T Consensus       229 f~~~~~~~~~~~~i~~-~~~~~----------------------------------------------~~~~~~~~~~~~  261 (290)
T 3fpq_A          229 YSECQNAAQIYRRVTS-GVKPA----------------------------------------------SFDKVAIPEVKE  261 (290)
T ss_dssp             TTTCSSHHHHHHHHTT-TCCCG----------------------------------------------GGGGCCCHHHHH
T ss_pred             CCCCCcHHHHHHHHHc-CCCCC----------------------------------------------CCCccCCHHHHH
Confidence            9876554433222110 11111                                              112345678999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          398 LLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      ||.+||+.||++|||++|+|+||||+++
T Consensus       262 li~~~L~~dP~~R~s~~e~l~Hp~~~~~  289 (290)
T 3fpq_A          262 IIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             HHHHHccCChhHCcCHHHHhcCccccCC
Confidence            9999999999999999999999999864

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=6.3e-63  Score=461.96  Aligned_cols=250  Identities=28%  Similarity=0.449  Sum_probs=208.3

Q ss_pred             CceEEEeeeeeecceEEEEEEEC---CCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ++|++++.||+|+||+||+|++.   .+++.||||++++..   .....+.+|+.+|+.++||||     |+++++++++
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~l~~~~~~~   98 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI-----VKLHYAFQTE   98 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTE-----ECEEEEEEET
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCC-----CeEEEEEEEC
Confidence            57999999999999999999874   468899999997432   233467889999998888776     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+||||||| ||+|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||++.+|             
T Consensus        99 ~~~~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g-------------  163 (304)
T 3ubd_A           99 GKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG-------------  163 (304)
T ss_dssp             TEEEEEECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTS-------------
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCC-------------
Confidence            9999999999 999999998765  799999999999999999999999999999999999997766             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                    .+||+|||+|+...   ....+.+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.
T Consensus       164 --------------~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~  229 (304)
T 3ubd_A          164 --------------HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK  229 (304)
T ss_dssp             --------------CEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             --------------CEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc
Confidence                          46666666665432   2233468999999999999999999999999999999999999999998


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +..+.+..+.+....+                                                  +..+++++.+||.+
T Consensus       230 ~~~~~~~~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~  259 (304)
T 3ubd_A          230 DRKETMTMILKAKLGM--------------------------------------------------PQFLSPEAQSLLRM  259 (304)
T ss_dssp             SHHHHHHHHHHCCCCC--------------------------------------------------CTTSCHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCC--------------------------------------------------CCcCCHHHHHHHHH
Confidence            8887777665432222                                                  23457799999999


Q ss_pred             ccccCCCCCCC-----HHHHhcCCCCCCC
Q 013678          402 LLRYDPAERLK-----AREALRHPFFTRD  425 (438)
Q Consensus       402 ~L~~dP~~Rpt-----a~ell~hp~f~~~  425 (438)
                      ||+.||++|||     ++|+++||||++-
T Consensus       260 ~L~~dP~~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          260 LFKRNPANRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             HTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence            99999999998     5899999999864

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=3e-61  Score=469.10  Aligned_cols=283  Identities=27%  Similarity=0.477  Sum_probs=226.5

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceec--
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD--  163 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~--  163 (438)
                      .+.++|++++.||+|+||+||+|+++.+|+.||||++++..   ...+.+.+|+.+|+.|+|+||     |++++++.  
T Consensus        51 ~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnI-----v~l~~~~~~~  125 (398)
T 4b99_A           51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNI-----IAIKDILRPT  125 (398)
T ss_dssp             CCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTB-----CCEEEECCCS
T ss_pred             CCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCc-----ceEeeeeecc
Confidence            35578999999999999999999999999999999997532   344667899999999998887     99998865  


Q ss_pred             ----cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          164 ----YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       164 ----~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                          +.+++|||||||+|+|.+++...+  .+++..++.|++||+.||+|||++|||||||||+|||++.+|        
T Consensus       126 ~~~~~~~~~~ivmE~~~g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~--------  195 (398)
T 4b99_A          126 VPYGEFKSVYVVLDLMESDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENC--------  195 (398)
T ss_dssp             SCTTTCCCEEEEEECCSEEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTC--------
T ss_pred             cccccCCEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCC--------
Confidence                346899999999889999997654  799999999999999999999999999999999999997766        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccC-------CCCcccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHH
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH-------QDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVEL  311 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-------~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~el  311 (438)
                                         .+||+|||+|+...       ....+.+||+.|||||++.+.. ++.++||||+||++|||
T Consensus       196 -------------------~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~el  256 (398)
T 4b99_A          196 -------------------ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEM  256 (398)
T ss_dssp             -------------------CEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHH
T ss_pred             -------------------CEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHH
Confidence                               45666666665432       1223469999999999998864 69999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhh-hhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC
Q 013678          312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRA-EKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  390 (438)
Q Consensus       312 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (438)
                      ++|+.||.+.+..+++..|....|.++...+....... ..+...     ++.               ..+.......+.
T Consensus       257 l~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~-----~~~---------------~~~~~~~~~~~~  316 (398)
T 4b99_A          257 LARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQS-----LPP---------------RQPVPWETVYPG  316 (398)
T ss_dssp             HHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHS-----SCC---------------CCCCCHHHHSTT
T ss_pred             HHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhc-----CCC---------------cCCCCHHHhCCC
Confidence            99999999999999999999999988765432211100 000000     000               000111122345


Q ss_pred             chhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       391 ~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .++++++||.+||++||++||||+|+|+||||++.
T Consensus       317 ~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  351 (398)
T 4b99_A          317 ADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY  351 (398)
T ss_dssp             CCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred             CCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence            68899999999999999999999999999999874

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=2.5e-61  Score=456.55  Aligned_cols=250  Identities=26%  Similarity=0.331  Sum_probs=210.2

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      ..|++.++||+|+||.||+|+++.+|+.||||+++....    ..+|+.+++.|+||||     |++++++.+++.+|||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnI-----V~l~~~~~~~~~~~iv  128 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRI-----VPLYGAVREGPWVNIF  128 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTB-----CCEEEEEEETTEEEEE
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCC-----CcEEEEEEECCEEEEE
Confidence            568999999999999999999999999999999975432    2469999999988877     9999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||| ||+|.+++++.+  .+++..++.|+.||+.||+|||++|||||||||+||||+.+|.                  
T Consensus       129 mEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~------------------  188 (336)
T 4g3f_A          129 MELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGS------------------  188 (336)
T ss_dssp             ECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSC------------------
T ss_pred             EeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCC------------------
Confidence            9999 999999998765  7999999999999999999999999999999999999976552                  


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCC--------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQD--------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                              .+||+|||+|+.....        ....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+
T Consensus       189 --------~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~  260 (336)
T 4g3f_A          189 --------RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF  260 (336)
T ss_dssp             --------CEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC
T ss_pred             --------EEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence                    4677777777654321        123589999999999999999999999999999999999999998766


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ....+..+...  .+|                                             ....++.+++++.+||.+|
T Consensus       261 ~~~~~~~i~~~--~~~---------------------------------------------~~~~~~~~s~~~~~li~~~  293 (336)
T 4g3f_A          261 RGPLCLKIASE--PPP---------------------------------------------IREIPPSCAPLTAQAIQEG  293 (336)
T ss_dssp             CSCCHHHHHHS--CCG---------------------------------------------GGGSCTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHcC--CCC---------------------------------------------chhcCccCCHHHHHHHHHH
Confidence            55544444321  100                                             1123346788999999999


Q ss_pred             cccCCCCCCCHHHH-------------hcCCCCCCC
Q 013678          403 LRYDPAERLKAREA-------------LRHPFFTRD  425 (438)
Q Consensus       403 L~~dP~~Rpta~el-------------l~hp~f~~~  425 (438)
                      |+.||++|||+.|+             |+|||+.+-
T Consensus       294 L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~  329 (336)
T 4g3f_A          294 LRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEY  329 (336)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred             ccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCC
Confidence            99999999999997             689999864

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=5e-59  Score=448.72  Aligned_cols=304  Identities=25%  Similarity=0.393  Sum_probs=222.7

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEEC---CCCcEEEEEEeecchhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceecc
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~  164 (438)
                      .+.++|++.++||+|+||+||+|+++   .+++.||||++.... ....+.+|+.+|+.+ +|+||     ++++++|++
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nI-----v~l~~~~~~   91 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNV-----MGVKYCFRK   91 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTB-----CCCSEEEEE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCC-----ceEEEEEEE
Confidence            46788999999999999999999875   467899999986543 345678899999988 46666     999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecC-cccccCCccccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA-EYVKVPDYKFLS  242 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~-~~~kl~df~l~~  242 (438)
                      .+++||||||| +++|.+++.     .+++..++.++.||+.||+|||++||+||||||+|||++.+ +.+||+|||+++
T Consensus        92 ~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~  166 (361)
T 4f9c_A           92 NDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ  166 (361)
T ss_dssp             TTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             CCEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence            99999999999 999999983     49999999999999999999999999999999999999876 788888888876


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcc---------------cCCCCcccccCCCcchhHHHhCCC-CCcchhHHHHHH
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTF---------------EHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGC  306 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~---------------~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~  306 (438)
                      ......           ..+.+|+.+..               ........+||+.|||||++.+.. |+.++||||+||
T Consensus       167 ~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~  235 (361)
T 4f9c_A          167 GTHDTK-----------IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGV  235 (361)
T ss_dssp             ECTTCS-----------CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred             ccCCcc-----------ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHH
Confidence            543221           22223322111               011123458999999999998864 899999999999


Q ss_pred             HHHHHHhCCCCC-CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhc-------
Q 013678          307 ILVELCSGEALF-QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL-------  378 (438)
Q Consensus       307 il~elltg~~pf-~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  378 (438)
                      ++|||++|+.|| .+.++.+++..|...+|..+.........  .....   ....+.     .......+..       
T Consensus       236 il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~--~~~~~---~~~~p~-----~~~~~~~~~~~~~~~~~  305 (361)
T 4f9c_A          236 IFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFG--KSILC---SKEVPA-----QDLRKLCERLRGMDSST  305 (361)
T ss_dssp             HHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT--EEEEE---SSCCCC-----CCHHHHHHHHC------
T ss_pred             HHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhcc--ccccc---cccCcc-----hhhhHHHHhhccccccc
Confidence            999999999998 45677888999999888644332221110  00000   000110     0011111000       


Q ss_pred             -------cchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          379 -------RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       379 -------~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                             ............++++++|||.+||++||++|+||+|+|+||||++
T Consensus       306 p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~  358 (361)
T 4f9c_A          306 PKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD  358 (361)
T ss_dssp             ----------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred             cccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence                   0001112234567889999999999999999999999999999986

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=8e-58  Score=428.98  Aligned_cols=265  Identities=26%  Similarity=0.334  Sum_probs=193.2

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC---
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN---  166 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~---  166 (438)
                      .+|++++.||+|+||+||+|+++.+|+.||||+++..  ....+.+.+|+.+|+.|+||||     |+++++|.+.+   
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnI-----V~~~~~~~~~~~~~   79 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI-----VRYFNAWLEKNTTE   79 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEEEC---
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEEecCccc
Confidence            4699999999999999999999999999999998753  2345678899999999998887     99999886433   


Q ss_pred             ---------eEEEEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccccc
Q 013678          167 ---------HICIVFEKL-GPSLYDFLRKNSY-RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV  235 (438)
Q Consensus       167 ---------~~~lv~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl  235 (438)
                               ++||||||| +|+|.+++..... ...++..++.|+.||+.||+|||++|||||||||+|||++.+|.+||
T Consensus        80 ~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl  159 (299)
T 4g31_A           80 KLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKV  159 (299)
T ss_dssp             -------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             cccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEE
Confidence                     489999999 9999999986542 23456778999999999999999999999999999999988776555


Q ss_pred             CCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCC
Q 013678          236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       236 ~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~  315 (438)
                      +|||+++....+.....        ....    ..........+||+.|||||++.+..|+.++|||||||++|||++  
T Consensus       160 ~DFGla~~~~~~~~~~~--------~~~~----~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~--  225 (299)
T 4g31_A          160 GDFGLVTAMDQDEEEQT--------VLTP----MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY--  225 (299)
T ss_dssp             CCCCCC--------------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS--
T ss_pred             ccCccceecCCCccccc--------cccc----cccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc--
Confidence            55555443222110000        0000    000011233589999999999999999999999999999999996  


Q ss_pred             CCCCCCChHHHHHHHHHHh-CCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          316 ALFQTHENLEHLAMMERVL-GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                       ||.+  ..+....+.... +..|+.+                                               ...++.
T Consensus       226 -Pf~~--~~~~~~~~~~~~~~~~p~~~-----------------------------------------------~~~~~~  255 (299)
T 4g31_A          226 -PFST--QMERVRTLTDVRNLKFPPLF-----------------------------------------------TQKYPC  255 (299)
T ss_dssp             -CCSS--HHHHHHHHHHHHTTCCCHHH-----------------------------------------------HHHCHH
T ss_pred             -CCCC--ccHHHHHHHHHhcCCCCCCC-----------------------------------------------cccCHH
Confidence             7754  223333232221 2222211                                               112446


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          395 LIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      +.+||.+||+.||++|||+.|+|+||||++-
T Consensus       256 ~~~li~~~L~~dP~~Rps~~eil~h~~~~~~  286 (299)
T 4g31_A          256 EYVMVQDMLSPSPMERPEAINIIENAVFEDL  286 (299)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred             HHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence            7899999999999999999999999999874

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=4.2e-57  Score=460.60  Aligned_cols=261  Identities=28%  Similarity=0.428  Sum_probs=226.0

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      .+.++|++++.||+|+||.||+|+++.+|+.||||++.... ...+.+.+|+.+|+.|+|+||     |+++++|++.+.
T Consensus       154 ~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnI-----v~l~~~~~~~~~  228 (573)
T 3uto_A          154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL-----VNLHDAFEDDNE  228 (573)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTB-----CCEEEEEECSSE
T ss_pred             cCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCC-----CeEEEEEEECCE
Confidence            34578999999999999999999999999999999987543 345678899999999998887     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||||| ||+|.+++.... ..+++..++.|+.||+.||+|||++||+||||||+|||++.+                
T Consensus       229 ~~iv~E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~----------------  291 (573)
T 3uto_A          229 MVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK----------------  291 (573)
T ss_dssp             EEEEEECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS----------------
T ss_pred             EEEEEeecCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCC----------------
Confidence            99999999 999999996543 469999999999999999999999999999999999999643                


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                               ..+.+||+|||+|+......  ...+||+.|||||++.+..|+.++|||||||++|||++|..||.+.+..
T Consensus       292 ---------~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~  362 (573)
T 3uto_A          292 ---------RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD  362 (573)
T ss_dssp             ---------SCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH
T ss_pred             ---------CCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH
Confidence                     23468999999988765443  3468999999999999999999999999999999999999999998888


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +.+..+......++.                                              .....+++++++||.+||+
T Consensus       363 ~~~~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~dli~~~L~  396 (573)
T 3uto_A          363 ETLRNVKSCDWNMDD----------------------------------------------SAFSGISEDGKDFIRKLLL  396 (573)
T ss_dssp             HHHHHHHTTCCCCCS----------------------------------------------GGGTTSCHHHHHHHHTTSC
T ss_pred             HHHHHHHhCCCCCCc----------------------------------------------ccccCCCHHHHHHHHHHcc
Confidence            877777554333221                                              1223567899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      .||.+|||+.|+|+||||+...
T Consensus       397 ~dp~~R~t~~e~l~Hpw~~~~~  418 (573)
T 3uto_A          397 ADPNTRMTIHQALEHPWLTPGN  418 (573)
T ss_dssp             SSGGGSCCHHHHHHSTTTSCCC
T ss_pred             CChhHCcCHHHHhcCcCcCCCC
Confidence            9999999999999999999753

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=2.6e-57  Score=424.84  Aligned_cols=250  Identities=20%  Similarity=0.323  Sum_probs=206.4

Q ss_pred             CceEEEeeeeeecceEEEEEEEC-----CCCcEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ++|.+.++||+|+||+||+|++.     .++..||||+++.. ....+.+.+|+.+|++|+|+||     |++++++.++
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnI-----V~l~g~~~~~   87 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI-----VKFYGVCVEG   87 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEECSS
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCC-----ccEEEEEeeC
Confidence            67999999999999999999865     35788999999753 3456778999999999998887     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccc
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNS-----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  233 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~  233 (438)
                      +.+||||||| +|+|.++|...+           ...+++..+..|+.||+.||+|||+++||||||||+|||++.++  
T Consensus        88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~--  165 (299)
T 4asz_A           88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL--  165 (299)
T ss_dssp             SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG--
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCC--
Confidence            9999999999 999999997642           34699999999999999999999999999999999999997766  


Q ss_pred             ccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHH
Q 013678          234 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL  308 (438)
Q Consensus       234 kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il  308 (438)
                                               .+||+|||+|+......     ....||+.|||||++.+..|+.++|||||||+|
T Consensus       166 -------------------------~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl  220 (299)
T 4asz_A          166 -------------------------LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL  220 (299)
T ss_dssp             -------------------------CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             -------------------------cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHH
Confidence                                     46777777765432221     224689999999999999999999999999999


Q ss_pred             HHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhc
Q 013678          309 VELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH  387 (438)
Q Consensus       309 ~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (438)
                      |||+| |+.||.+.+..+.+..+....  .+                                               ..
T Consensus       221 ~Ellt~G~~Pf~~~~~~~~~~~i~~~~--~~-----------------------------------------------~~  251 (299)
T 4asz_A          221 WEIFTYGKQPWYQLSNNEVIECITQGR--VL-----------------------------------------------QR  251 (299)
T ss_dssp             HHHHTTTCCTTTTSCHHHHHHHHHHTC--CC-----------------------------------------------CC
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHcCC--CC-----------------------------------------------CC
Confidence            99998 999999988777666554321  00                                               11


Q ss_pred             cCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       388 ~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      +..+++++.+||.+||+.||++|||+.||+  +|+++
T Consensus       252 p~~~~~~~~~li~~cl~~dP~~RPs~~~i~--~~L~~  286 (299)
T 4asz_A          252 PRTCPQEVYELMLGCWQREPHMRKNIKGIH--TLLQN  286 (299)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHH--HHHHH
T ss_pred             CccchHHHHHHHHHHcCCChhHCcCHHHHH--HHHHH
Confidence            234677899999999999999999999994  35543

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.1e-56  Score=455.38  Aligned_cols=256  Identities=24%  Similarity=0.373  Sum_probs=205.4

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++++.||+|+||.||+|+++.+|+.||||++++..    .......+|..++..+.+.  .|||||+++++|++.+.
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~--~HP~IV~l~~~f~~~~~  266 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG--DCPFIVCMSYAFHTPDK  266 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS--CCTTBCCEEEEEECSSE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhC--CCCCEeEEEEEEEECCE
Confidence            68999999999999999999999999999999997532    2234455565555544322  34555999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||||| ||+|.++|.+.+  .+++..++.|+.||+.||+|||++|||||||||+||||+.+|               
T Consensus       267 lylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G---------------  329 (689)
T 3v5w_A          267 LSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG---------------  329 (689)
T ss_dssp             EEEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTS---------------
T ss_pred             EEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCC---------------
Confidence            99999999 999999998765  799999999999999999999999999999999999997766               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCC-CCcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                  .+||+|||+|..... ...+.+||+.|||||++.+ ..|+.++|||||||+||||++|..||.+.+..
T Consensus       330 ------------~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~  397 (689)
T 3v5w_A          330 ------------HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK  397 (689)
T ss_dssp             ------------CEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC
T ss_pred             ------------CEEecccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence                        566677777655433 2345699999999999975 57999999999999999999999999764322


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +....+......                                               ....+..+++++++||.+||+
T Consensus       398 ~~~~i~~~i~~~-----------------------------------------------~~~~p~~~S~~a~dLI~~lL~  430 (689)
T 3v5w_A          398 DKHEIDRMTLTM-----------------------------------------------AVELPDSFSPELRSLLEGLLQ  430 (689)
T ss_dssp             CHHHHHHHHHHC-----------------------------------------------CCCCCTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHhhcCC-----------------------------------------------CCCCCccCCHHHHHHHHHHcc
Confidence            211111111100                                               011234567899999999999


Q ss_pred             cCCCCCCC-----HHHHhcCCCCCCC
Q 013678          405 YDPAERLK-----AREALRHPFFTRD  425 (438)
Q Consensus       405 ~dP~~Rpt-----a~ell~hp~f~~~  425 (438)
                      .||++|++     ++||++||||++-
T Consensus       431 ~dP~~Rl~~~~~ga~ei~~HpfF~~i  456 (689)
T 3v5w_A          431 RDVNRRLGCLGRGAQEVKESPFFRSL  456 (689)
T ss_dssp             SCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred             CCHhHCCCCCCCCHHHHhcCccccCC
Confidence            99999998     8999999999874

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.6e-56  Score=425.12  Aligned_cols=247  Identities=21%  Similarity=0.333  Sum_probs=202.3

Q ss_pred             CceEEEeeeeeecceEEEEEEEC-----CCCcEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+|.+.++||+|+||+||+|++.     .+++.||||+++.. ....+.+.+|+.+|++++|+||     |++++++.+.
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnI-----V~l~g~~~~~  115 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI-----VRFFGVCTEG  115 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEECSS
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCC-----CcEEEEEEEC
Confidence            57899999999999999999864     36889999999753 3456778999999999998887     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNS-------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  231 (438)
                      +.+||||||| +|+|.+++....             ...+++..+..|+.||+.||+|||+++||||||||+|||++.++
T Consensus       116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~  195 (329)
T 4aoj_A          116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGL  195 (329)
T ss_dssp             SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTT
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCC
Confidence            9999999999 999999997642             13589999999999999999999999999999999999998766


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHHHH
Q 013678          232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC  306 (438)
Q Consensus       232 ~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  306 (438)
                      .                           +||+|||+|+.....     ....+||+.|||||++.+..++.++|||||||
T Consensus       196 ~---------------------------~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gv  248 (329)
T 4aoj_A          196 V---------------------------VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGV  248 (329)
T ss_dssp             E---------------------------EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHH
T ss_pred             c---------------------------EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHH
Confidence            4                           566666666543221     12357999999999999999999999999999


Q ss_pred             HHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhh
Q 013678          307 ILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  385 (438)
Q Consensus       307 il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (438)
                      +||||+| |+.||.+.+..+.+..+.+..                       +.                          
T Consensus       249 vl~Ellt~G~~Pf~~~~~~~~~~~i~~g~-----------------------~~--------------------------  279 (329)
T 4aoj_A          249 VLWEIFTYGKQPWYQLSNTEAIDCITQGR-----------------------EL--------------------------  279 (329)
T ss_dssp             HHHHHHTTSCCTTCSSCHHHHHHHHHHTC-----------------------CC--------------------------
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHcCC-----------------------CC--------------------------
Confidence            9999999 899999888777666554321                       00                          


Q ss_pred             hccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       386 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      ..+..+++++.+||.+||+.||++|||+.||+++
T Consensus       280 ~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          280 ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            1123567799999999999999999999999864

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-56  Score=419.79  Aligned_cols=252  Identities=23%  Similarity=0.351  Sum_probs=199.1

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      .+++++.++||+|+||+||+|+...   .||||+++.   .....+.+.+|+.++++++|+||     |++++++.. +.
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNI-----V~l~g~~~~-~~  105 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNI-----LLFMGYMTK-DN  105 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEECS-SS
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEC-Ce
Confidence            3678899999999999999998543   599999864   23455778999999999998887     999998765 56


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||||| +|+|.+++.... ..+++..+..|+.||+.||+|||+++||||||||+|||++.++.              
T Consensus       106 ~~iVmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~--------------  170 (307)
T 3omv_A          106 LAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLT--------------  170 (307)
T ss_dssp             CEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEE--------------
T ss_pred             EEEEEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCc--------------
Confidence            89999999 999999997654 46999999999999999999999999999999999999987764              


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCC-----CCcccccCCCcchhHHHhCC---CCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                   +||+|||+|+....     .....+||+.|||||++.+.   .|+.++|||||||+||||+||+.||
T Consensus       171 -------------~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf  237 (307)
T 3omv_A          171 -------------VKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY  237 (307)
T ss_dssp             -------------EEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             -------------EEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCC
Confidence                         56666666654322     12335899999999999753   5899999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      .+.+....+..+.......|.                                            .......+++++.+|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~p~--------------------------------------------~~~~~~~~~~~l~~l  273 (307)
T 3omv_A          238 SHINNRDQIIFMVGRGYASPD--------------------------------------------LSKLYKNCPKAMKRL  273 (307)
T ss_dssp             TTCCCHHHHHHHHHTTCCCCC--------------------------------------------STTSCTTSCHHHHHH
T ss_pred             CCCChHHHHHHHHhcCCCCCC--------------------------------------------cccccccchHHHHHH
Confidence            887766555444322111110                                            011234567899999


Q ss_pred             HHHccccCCCCCCCHHHH------hcCCCCC
Q 013678          399 LQGLLRYDPAERLKAREA------LRHPFFT  423 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~el------l~hp~f~  423 (438)
                      |.+||+.||++|||+.||      |+|++-+
T Consensus       274 i~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk  304 (307)
T 3omv_A          274 VADCVKKVKEERPLFPQILSSIELLQHSLPK  304 (307)
T ss_dssp             HHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred             HHHHcCCCHhHCcCHHHHHHHHHHHhccCCC
Confidence            999999999999999876      5666643

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.5e-56  Score=421.48  Aligned_cols=248  Identities=20%  Similarity=0.261  Sum_probs=205.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEEC-----CCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      ...+++.++||+|+||+||+|+..     .+++.||||+++..  ....+.+.+|+.++.+++|+||     |++++++.
T Consensus        25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNI-----V~l~g~~~   99 (308)
T 4gt4_A           25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV-----VCLLGVVT   99 (308)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTB-----CCEEEEEC
T ss_pred             HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCC-----CCcceEEE
Confidence            367899999999999999999853     46789999999643  2345789999999999999888     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  228 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~  228 (438)
                      +++.+||||||| +|+|.++|..+.              ...+++..+..|+.||+.||+|||+++||||||||+|||++
T Consensus       100 ~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~  179 (308)
T 4gt4_A          100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY  179 (308)
T ss_dssp             SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC
Confidence            999999999999 999999997532              13589999999999999999999999999999999999998


Q ss_pred             cCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC-----CCcccccCCCcchhHHHhCCCCCcchhHHH
Q 013678          229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWS  303 (438)
Q Consensus       229 ~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS  303 (438)
                      .++                           .+||+|||+|+....     .....+||+.|||||++.+..|+.++||||
T Consensus       180 ~~~---------------------------~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwS  232 (308)
T 4gt4_A          180 DKL---------------------------NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWS  232 (308)
T ss_dssp             GGG---------------------------CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHH
T ss_pred             CCC---------------------------CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhh
Confidence            766                           456666666654322     123357999999999999999999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchh
Q 013678          304 VGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN  382 (438)
Q Consensus       304 lG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (438)
                      |||+||||+| |..||.+.+..+.+..+....                       +.                       
T Consensus       233 fGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~-----------------------~~-----------------------  266 (308)
T 4gt4_A          233 YGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQ-----------------------VL-----------------------  266 (308)
T ss_dssp             HHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTC-----------------------CC-----------------------
T ss_pred             HHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-----------------------CC-----------------------
Confidence            9999999998 899999988777665553211                       00                       


Q ss_pred             hhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       383 ~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                         +.+..+++++.+||.+||+.||++|||+.||+++
T Consensus       267 ---~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          267 ---PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence               1123567789999999999999999999999875

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=6.6e-55  Score=422.58  Aligned_cols=341  Identities=38%  Similarity=0.685  Sum_probs=267.8

Q ss_pred             CCCCCCceeeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcc
Q 013678           75 PDDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR  154 (438)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~  154 (438)
                      .++....+.+..+..+.++|+++++||+|+||.||+|++..+++.||||+++...........|+.+++.+.+..+.|+|
T Consensus        18 ~~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~   97 (360)
T 3llt_A           18 GDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNN   97 (360)
T ss_dssp             --CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGG
T ss_pred             cCccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCC
Confidence            34445667788899999999999999999999999999999999999999987666677788999999999977777888


Q ss_pred             eEEecceeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 013678          155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  234 (438)
Q Consensus       155 iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  234 (438)
                      ++++++++...+..|+||||++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.....+
T Consensus        98 iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~  177 (360)
T 3llt_A           98 IVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEK  177 (360)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCE
T ss_pred             eecccceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccc
Confidence            89999999999999999999999999999987656799999999999999999999999999999999999997532110


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhC
Q 013678          235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       235 l~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg  314 (438)
                      -. ... ..................+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus       178 ~~-~~~-~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g  255 (360)
T 3llt_A          178 SL-ITV-RRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG  255 (360)
T ss_dssp             EE-EEE-ECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS
T ss_pred             cc-cch-hcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHC
Confidence            00 000 0000000000000235679999999998877766777899999999999999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhh--hcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCch
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKY--FRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  392 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (438)
                      +.||.+.+..+.+..+....+++|..+...........  ........|+.................      ......+
T Consensus       256 ~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~------~~~~~~~  329 (360)
T 3llt_A          256 SLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLP------LYKIIKH  329 (360)
T ss_dssp             SCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCC------HHHHCCC
T ss_pred             CCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhccc------ccccchH
Confidence            99999999999999999999999988876654322222  222334456655444333322221111      1112335


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q 013678          393 GDLIDLLQGLLRYDPAERLKAREALRHPFFT  423 (438)
Q Consensus       393 ~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~  423 (438)
                      +.+.+||.+||+.||++|||+.|+|+||||+
T Consensus       330 ~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          330 ELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            6899999999999999999999999999996

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=3.7e-54  Score=426.40  Aligned_cols=326  Identities=34%  Similarity=0.604  Sum_probs=254.7

Q ss_pred             CCceeeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcC-CCCcceEE
Q 013678           79 DGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-IGGTRCVQ  157 (438)
Q Consensus        79 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~~~iv~  157 (438)
                      .+.+....++.+..+|++++.||+|+||.||+|.+..+++.||||+++........+.+|+.+++.+.|.. ..++|+++
T Consensus        84 ~~~~~~~~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~  163 (429)
T 3kvw_A           84 QGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIH  163 (429)
T ss_dssp             TSCBCCCTTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCC
T ss_pred             CCCccccCCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEE
Confidence            34555566778899999999999999999999999999999999999877667788889999999998864 35578899


Q ss_pred             ecceeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 013678          158 IRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       158 ~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      +++++...+++|+||||++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.     
T Consensus       164 ~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~-----  238 (429)
T 3kvw_A          164 MLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGR-----  238 (429)
T ss_dssp             EEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTS-----
T ss_pred             EEeecccCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCC-----
Confidence            999999999999999999889999998876567999999999999999999999999999999999999976541     


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                          ..+||+|||++..........+||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus       239 --------------------~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~p  298 (429)
T 3kvw_A          239 --------------------SGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPL  298 (429)
T ss_dssp             --------------------CCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             --------------------cceEEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCC
Confidence                                238999999998777666677899999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhh----------HHHHHHhccchhhhhhc
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS----------MRAVWKLLRLPNLIMQH  387 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~  387 (438)
                      |.+.+..+.+..+.+.++.++..+........ .++.......+.........          .................
T Consensus       299 f~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  377 (429)
T 3kvw_A          299 LPGEDEGDQLACMIELLGMPSQKLLDASKRAK-NFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNAL  377 (429)
T ss_dssp             SCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHH-HHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHT
T ss_pred             CCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhh-hccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhc
Confidence            99999999999999999999988766543322 23222211111000000000          00000000000111112


Q ss_pred             cCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCCce
Q 013678          388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT  430 (438)
Q Consensus       388 ~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~~~  430 (438)
                      ....++++.+||.+||++||++|||+.|+|+||||++...++.
T Consensus       378 ~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~~~~  420 (429)
T 3kvw_A          378 KGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKPP  420 (429)
T ss_dssp             TTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC-------
T ss_pred             cccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCCCCC
Confidence            2345778999999999999999999999999999998766543

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1e-54  Score=415.99  Aligned_cols=249  Identities=22%  Similarity=0.329  Sum_probs=200.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCC-----CcEEEEEEeecc--hhhHHHHHHHHHHHHHHHh-cCCCCcceEEeccee
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSI--NKYREAAMIEIDVLQRLAR-HDIGGTRCVQIRNWF  162 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~-~~i~~~~iv~~~~~~  162 (438)
                      .++|++.++||+|+||+||+|.+..+     ++.||||+++..  ....+.+.+|+.+|.++.| +||     |++++++
T Consensus        63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnI-----V~l~g~~  137 (353)
T 4ase_A           63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV-----VNLLGAC  137 (353)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEE
T ss_pred             HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcE-----EEEEEEE
Confidence            47899999999999999999987654     468999999753  2345678899999999987 455     9999988


Q ss_pred             cc-CCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEE
Q 013678          163 DY-RNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL  226 (438)
Q Consensus       163 ~~-~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  226 (438)
                      .. ++.+||||||| +|+|.++|+...              ...+++..+..|+.||+.||+|||+++||||||||+|||
T Consensus       138 ~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NIL  217 (353)
T 4ase_A          138 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  217 (353)
T ss_dssp             CCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCcccee
Confidence            65 56799999999 999999997632              235899999999999999999999999999999999999


Q ss_pred             EecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhH
Q 013678          227 LVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDL  301 (438)
Q Consensus       227 i~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di  301 (438)
                      ++.++.                           +||+|||+|+......     ...+||+.|||||++.+..|+.++||
T Consensus       218 l~~~~~---------------------------vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDV  270 (353)
T 4ase_A          218 LSEKNV---------------------------VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV  270 (353)
T ss_dssp             ECGGGC---------------------------EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHH
T ss_pred             eCCCCC---------------------------EEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccE
Confidence            987775                           4555555554432221     23478999999999999999999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccc
Q 013678          302 WSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL  380 (438)
Q Consensus       302 wSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (438)
                      |||||+||||+| |..||.+.+..+.+..+... +.                     +.                     
T Consensus       271 wS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~-g~---------------------~~---------------------  307 (353)
T 4ase_A          271 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GT---------------------RM---------------------  307 (353)
T ss_dssp             HHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHH-TC---------------------CC---------------------
T ss_pred             eehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHc-CC---------------------CC---------------------
Confidence            999999999998 99999886544333222211 00                     11                     


Q ss_pred             hhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       381 ~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                           ..+..+++++.+||.+||+.||++|||+.||++|
T Consensus       308 -----~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          308 -----RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence                 1223457789999999999999999999999987

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=4.7e-53  Score=414.65  Aligned_cols=340  Identities=29%  Similarity=0.538  Sum_probs=257.8

Q ss_pred             CCCCceeeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCC---Cc
Q 013678           77 DKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GT  153 (438)
Q Consensus        77 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~---~~  153 (438)
                      ..++++++.+++.+.++|++.++||+|+||.||+|++..+++.||||+++......+.+.+|+.+++.+.|.+..   |+
T Consensus        22 ~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~  101 (397)
T 1wak_A           22 CKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNRE  101 (397)
T ss_dssp             CC--CCSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGG
T ss_pred             CCCCceEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcc
Confidence            445778899999999999999999999999999999999999999999987766778889999999999986643   46


Q ss_pred             ceEEecceec----cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEe
Q 013678          154 RCVQIRNWFD----YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLV  228 (438)
Q Consensus       154 ~iv~~~~~~~----~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~  228 (438)
                      |++++++++.    ...++||||||++++|.+.+.......+++..++.++.||+.||+|||++ ||+||||||+|||++
T Consensus       102 ~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~  181 (397)
T 1wak_A          102 MVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLS  181 (397)
T ss_dssp             GBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEEC
T ss_pred             eeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEe
Confidence            6899999987    56789999999988888888776556799999999999999999999998 999999999999998


Q ss_pred             cCcccccCCccccccCCCC-----------------CCc-----ccCCCCCCCeEEecCCCCcccCCCCcccccCCCcch
Q 013678          229 SAEYVKVPDYKFLSRSSKD-----------------GSY-----FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRA  286 (438)
Q Consensus       229 ~~~~~kl~df~l~~~~~~~-----------------~~~-----~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~a  286 (438)
                      .++.....+++........                 +..     .........+||+|||++..........+||+.|+|
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~a  261 (397)
T 1wak_A          182 VNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRS  261 (397)
T ss_dssp             CCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCC
T ss_pred             ccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccC
Confidence            7763222111111000000                 000     000012347999999999887776666789999999


Q ss_pred             hHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCccc
Q 013678          287 PEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLD  360 (438)
Q Consensus       287 PE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  360 (438)
                      ||++.+..++.++|||||||++|+|++|..||...+      ....+..+.+.++.+|..+..........+...+....
T Consensus       262 PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  341 (397)
T 1wak_A          262 LEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKH  341 (397)
T ss_dssp             HHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSS
T ss_pred             ChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccc
Confidence            999999999999999999999999999999997654      56778888899999998876554433222222221111


Q ss_pred             CCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          361 WPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      ...... ..........       .......+..+.+||.+||+.||++|||+.|+|+||||++
T Consensus       342 ~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          342 ITKLKP-WGLFEVLVEK-------YEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             CCCCCC-CCHHHHHHHT-------SCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             ccccCC-cchhHhhhhh-------cccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence            111111 1111111111       1122334678999999999999999999999999999974

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1.3e-52  Score=402.56  Aligned_cols=332  Identities=46%  Similarity=0.845  Sum_probs=261.5

Q ss_pred             CceeeecCCccCCceEEEeeeeeecceEEEEEEE-CCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCC-CCcceEE
Q 013678           80 GHYVFAIGENLTPRCKILSKMGEGTFGQVVECFD-NEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI-GGTRCVQ  157 (438)
Q Consensus        80 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i-~~~~iv~  157 (438)
                      +++.+..++.+.++|++.+.||+|+||.||+|.+ ..+++.||||+++......+.+.+|+.+++.+.|++. .++++++
T Consensus         2 ~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~   81 (339)
T 1z57_A            2 MHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQ   81 (339)
T ss_dssp             GGGTCSTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCC
T ss_pred             CceeeecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEe
Confidence            3456677899999999999999999999999998 5688999999998766677888999999999999864 3457899


Q ss_pred             ecceeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 013678          158 IRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       158 ~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      +++++.+.+++|+||||++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++..+.....+
T Consensus        82 ~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~  161 (339)
T 1z57_A           82 MLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYN  161 (339)
T ss_dssp             EEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC
T ss_pred             eecccccCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccC
Confidence            99999999999999999999999999887656799999999999999999999999999999999999997654322211


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                      .+....        .....+..+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       162 ~~~~~~--------~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p  233 (339)
T 1z57_A          162 PKIKRD--------ERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV  233 (339)
T ss_dssp             ----CE--------EEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             Cccccc--------cccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCC
Confidence            111000        000124579999999998877666677899999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |...+..+....+....+++|..+.......  .++. .....|..........   .................++++.+
T Consensus       234 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~  307 (339)
T 1z57_A          234 FPTHDSKEHLAMMERILGPLPKHMIQKTRKR--KYFH-HDRLDWDEHSSAGRYV---SRACKPLKEFMLSQDVEHERLFD  307 (339)
T ss_dssp             CCCSCHHHHHHHHHHHHCSCCHHHHHHCSCG--GGEE-TTEECCCTTSHHHHHH---HHHCCCGGGGCSCCSHHHHHHHH
T ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHhhccch--hHHh-hccccccccccccchh---hhcCcchhhhcccchhhHHHHHH
Confidence            9999999999999999999998876654321  1111 1234454322211111   11111111111222345678999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          398 LLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      ||.+||+.||++|||+.|+++||||++-
T Consensus       308 li~~~L~~dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          308 LIQKMLEYDPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             HHHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred             HHHHHhCcCcccccCHHHHhcCHHHHHH
Confidence            9999999999999999999999999864

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=7.9e-53  Score=411.25  Aligned_cols=322  Identities=35%  Similarity=0.625  Sum_probs=251.9

Q ss_pred             CCceeeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHH-hcCCCCcceEE
Q 013678           79 DGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGTRCVQ  157 (438)
Q Consensus        79 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~iv~  157 (438)
                      ...|.+..++.+.++|++.+.||+|+||.||+|++..+++.||||+++........+.+|+.+++.+. |+++.++++++
T Consensus        41 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~  120 (382)
T 2vx3_A           41 NYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVH  120 (382)
T ss_dssp             TSCBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCC
T ss_pred             CCcEEeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEE
Confidence            34467788899999999999999999999999999999999999999876666778889999999997 55666677899


Q ss_pred             ecceeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--hCCceecCCCCCcEEEecCccccc
Q 013678          158 IRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH--ELRLIHTDLKPENILLVSAEYVKV  235 (438)
Q Consensus       158 ~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH--~~~ivHrDlkp~NIli~~~~~~kl  235 (438)
                      +++++...+++||||||++++|.+++.......+++..++.++.||+.||.|||  +.||+||||||+|||++.+     
T Consensus       121 ~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~-----  195 (382)
T 2vx3_A          121 LKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNP-----  195 (382)
T ss_dssp             EEEEEEETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESST-----
T ss_pred             eeeeeccCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecC-----
Confidence            999999999999999999889999998876567999999999999999999999  5799999999999999542     


Q ss_pred             CCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCC
Q 013678          236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       236 ~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~  315 (438)
                                          .+..+||+|||++...........||+.|+|||++.+..++.++|||||||++|||++|.
T Consensus       196 --------------------~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~  255 (382)
T 2vx3_A          196 --------------------KRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE  255 (382)
T ss_dssp             --------------------TSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             --------------------CCCcEEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence                                234689999999987766666678999999999999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCC-----C-----CChhhHHHHHHhc-cchhhh
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDG-----A-----TSRDSMRAVWKLL-RLPNLI  384 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~-~~~~~~  384 (438)
                      .||.+.+..+.+..+.+..+.+|..+...... ...++.......|...     .     .....+....... ..+...
T Consensus       256 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  334 (382)
T 2vx3_A          256 PLFSGANEVDQMNKIVEVLGIPPAHILDQAPK-ARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGR  334 (382)
T ss_dssp             CSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTT-HHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGT
T ss_pred             CCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHH-HHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCcc
Confidence            99999999999999999999888876644322 2222222211111000     0     0000111111000 000000


Q ss_pred             h----hccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          385 M----QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       385 ~----~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      .    ......++++.+||.+||++||++|||++|+|+||||++..
T Consensus       335 ~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~  380 (382)
T 2vx3_A          335 RAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA  380 (382)
T ss_dssp             TTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred             ccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence            0    00001234789999999999999999999999999998753

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=3.7e-53  Score=401.45  Aligned_cols=289  Identities=30%  Similarity=0.527  Sum_probs=223.2

Q ss_pred             cCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch------hhHHHHHHHHHHHHHHH---hcCCCCcceE
Q 013678           86 IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLA---RHDIGGTRCV  156 (438)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~---~~~i~~~~iv  156 (438)
                      +|+.+.++|++.++||+|+||+||+|++..+++.||||++....      .......+|+.+++.+.   |+||     +
T Consensus         3 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni-----v   77 (308)
T 3g33_A            3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV-----V   77 (308)
T ss_dssp             -------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTB-----C
T ss_pred             CCcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCe-----E
Confidence            45677899999999999999999999999999999999987422      12356778888888887   6665     9


Q ss_pred             EecceeccCC-----eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 013678          157 QIRNWFDYRN-----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       157 ~~~~~~~~~~-----~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  231 (438)
                      ++++++....     .+++||||++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus        78 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~  157 (308)
T 3g33_A           78 RLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG  157 (308)
T ss_dssp             CEEEEEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTS
T ss_pred             EeeeeeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC
Confidence            9999987654     68999999988999999887655699999999999999999999999999999999999997655


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHH
Q 013678          232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  309 (438)
Q Consensus       232 ~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  309 (438)
                                                 .+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|
T Consensus       158 ---------------------------~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  210 (308)
T 3g33_A          158 ---------------------------TVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFA  210 (308)
T ss_dssp             ---------------------------CEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHH
T ss_pred             ---------------------------CEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHH
Confidence                                       5777777777654332  23468999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccC
Q 013678          310 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD  389 (438)
Q Consensus       310 elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (438)
                      +|++|..||.+.+..+.+..+....+.++...                   |+.........    -....+........
T Consensus       211 ~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-------------------~~~~~~~~~~~----~~~~~~~~~~~~~~  267 (308)
T 3g33_A          211 EMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD-------------------WPRDVSLPRGA----FPPRGPRPVQSVVP  267 (308)
T ss_dssp             HTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTT-------------------SCSSCSSCGGG----SCCCCCCCHHHHSC
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh-------------------ccchhhccccc----cCCCCCCcHHHhCc
Confidence            99999999999999999999988888776432                   11111100000    00001111223345


Q ss_pred             CchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       390 ~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      .+++++.+||.+||++||++|||+.|+|+||||++....|
T Consensus       268 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~~~~  307 (308)
T 3g33_A          268 EMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP  307 (308)
T ss_dssp             SCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC-------
T ss_pred             cccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCCCCC
Confidence            6788999999999999999999999999999999875443

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=8.4e-53  Score=420.26  Aligned_cols=304  Identities=26%  Similarity=0.432  Sum_probs=232.8

Q ss_pred             CCCceeeecCC---ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCC
Q 013678           78 KDGHYVFAIGE---NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIG  151 (438)
Q Consensus        78 ~~~~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~  151 (438)
                      ..++|.+.+++   .+.++|+++++||+|+||.||+|++..+++.||||++...   ....+.+.+|+.+++.++|+|| 
T Consensus        45 ~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-  123 (464)
T 3ttj_A           45 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI-  123 (464)
T ss_dssp             -CCEEEEEC--CEEEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTB-
T ss_pred             cccceeeecCCcceeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCC-
Confidence            34677777777   5679999999999999999999999999999999999753   3445677899999999988877 


Q ss_pred             CcceEEecceeccC------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 013678          152 GTRCVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  225 (438)
Q Consensus       152 ~~~iv~~~~~~~~~------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  225 (438)
                          +++++++...      .++||||||++++|.+.+..    .+++..++.++.||+.||+|||++||+||||||+||
T Consensus       124 ----v~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NI  195 (464)
T 3ttj_A          124 ----ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI  195 (464)
T ss_dssp             ----CCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGE
T ss_pred             ----CcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhE
Confidence                9999998643      47899999997788888753    499999999999999999999999999999999999


Q ss_pred             EEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHH
Q 013678          226 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWS  303 (438)
Q Consensus       226 li~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwS  303 (438)
                      |++.++                           .+||+|||++......  ....+||+.|+|||++.+..++.++||||
T Consensus       196 ll~~~~---------------------------~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS  248 (464)
T 3ttj_A          196 VVKSDC---------------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWS  248 (464)
T ss_dssp             EECTTS---------------------------CEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHH
T ss_pred             EEeCCC---------------------------CEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHH
Confidence            997655                           5777777777655433  23468999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhh
Q 013678          304 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL  383 (438)
Q Consensus       304 lG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (438)
                      |||++|||++|+.||.+.+..+++..+.+.+|.++..++.........+........  .     ......+... ....
T Consensus       249 lG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~-~~~~  320 (464)
T 3ttj_A          249 VGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYA--G-----LTFPKLFPDS-LFPA  320 (464)
T ss_dssp             HHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCC--C-----CCHHHHSCGG-GSCC
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccC--C-----CChHHhCccc-cccc
Confidence            999999999999999999999999999999999988776655444444433321110  0     0000000000 0000


Q ss_pred             hhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       384 ~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      ........++++.+||.+||++||++|||++|+|+||||+..
T Consensus       321 ~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~  362 (464)
T 3ttj_A          321 DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  362 (464)
T ss_dssp             SSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             ccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence            000011125689999999999999999999999999999853

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=1.2e-52  Score=401.02  Aligned_cols=253  Identities=24%  Similarity=0.352  Sum_probs=216.5

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ..++|++++.||+|+||.||+|++..+|+.||||++...   ....+.+.+|+.+++.++|+||     +++++++.+.+
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~l~~~~~~~~   87 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI-----VKLFEVIETEK   87 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEECSS
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEECC
Confidence            347899999999999999999999999999999999753   2345667899999999988877     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      .+|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++              
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~--------------  151 (328)
T 3fe3_A           88 TLYLIMEYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADM--------------  151 (328)
T ss_dssp             EEEEEECCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS--------------
T ss_pred             EEEEEEECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCC--------------
Confidence            999999999 999999998765  699999999999999999999999999999999999997655              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                   .+||+|||++......  ....+||+.|+|||++.+..++ .++|||||||++|+|++|..||.+.+
T Consensus       152 -------------~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  218 (328)
T 3fe3_A          152 -------------NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN  218 (328)
T ss_dssp             -------------CEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             -------------CEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC
Confidence                         5777777777654322  2346899999999999988865 89999999999999999999999887


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ..+....+.......                                                  +...++++.+||.+|
T Consensus       219 ~~~~~~~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~~  248 (328)
T 3fe3_A          219 LKELRERVLRGKYRI--------------------------------------------------PFYMSTDCENLLKRF  248 (328)
T ss_dssp             HHHHHHHHHHCCCCC--------------------------------------------------CTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC--------------------------------------------------CCCCCHHHHHHHHHH
Confidence            766665554322111                                                  123467899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      |+.||.+|||++|+++||||+...
T Consensus       249 L~~dP~~R~t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          249 LVLNPIKRGTLEQIMKDRWINAGH  272 (328)
T ss_dssp             CCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred             CCCChhHCcCHHHHhcCHhhcCCC
Confidence            999999999999999999998754

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=3.5e-52  Score=402.22  Aligned_cols=336  Identities=44%  Similarity=0.850  Sum_probs=264.5

Q ss_pred             CCCCCceeeecCCccCCceEEEeeeeeecceEEEEEEECCCC-cEEEEEEeecchhhHHHHHHHHHHHHHHHhcCC-CCc
Q 013678           76 DDKDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREAAMIEIDVLQRLARHDI-GGT  153 (438)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i-~~~  153 (438)
                      ++..+++.+..++.+.++|++.+.||+|+||.||+|.+..++ +.||+|+++......+.+.+|+.+++.+.|++. .+.
T Consensus         3 ~~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~   82 (355)
T 2eu9_A            3 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKF   82 (355)
T ss_dssp             BCTTSCBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCS
T ss_pred             cccCCCcccccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCce
Confidence            356778889999999999999999999999999999998776 789999998766677888899999999999764 334


Q ss_pred             ceEEecceeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccc
Q 013678          154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  233 (438)
Q Consensus       154 ~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~  233 (438)
                      +++.+++++...++.||||||++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++..+..
T Consensus        83 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~  162 (355)
T 2eu9_A           83 LCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFE  162 (355)
T ss_dssp             CBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEE
T ss_pred             eEEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccc
Confidence            57899999999999999999998899998887665679999999999999999999999999999999999999765543


Q ss_pred             ccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh
Q 013678          234 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  313 (438)
Q Consensus       234 kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt  313 (438)
                      .+.+......        ...+....+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       163 ~~~~~~~~~~--------~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~  234 (355)
T 2eu9_A          163 TLYNEHKSCE--------EKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR  234 (355)
T ss_dssp             EEECCC-CCC--------EEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             cccccccccc--------ccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHh
Confidence            3322211100        01124567999999999887766667789999999999999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchh
Q 013678          314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  393 (438)
Q Consensus       314 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (438)
                      |..||.+.+..+.+..+....+.+|..+........  ++.. ....|+..........   ................+.
T Consensus       235 g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  308 (355)
T 2eu9_A          235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQK--YFYK-GGLVWDENSSDGRYVK---ENCKPLKSYMLQDSLEHV  308 (355)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGG--GEET-TEECCCTTSHHHHHHH---HHCCCGGGGCSCCSHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchh--hhcc-cccccccccchhcccc---ccCCcccccccccchhHH
Confidence            999999999999999999999999988776543211  1111 1223333221111111   111100111111223466


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      ++.+||.+||+.||++|||+.|+|+||||++.
T Consensus       309 ~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  340 (355)
T 2eu9_A          309 QLFDLMRRMLEFDPAQRITLAEALLHPFFAGL  340 (355)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHhcChhhcCC
Confidence            89999999999999999999999999999874

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=1.1e-52  Score=405.96  Aligned_cols=263  Identities=27%  Similarity=0.452  Sum_probs=224.5

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh-------hHHHHHHHHHHHHHHHhcCCCCcceEEec
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLARHDIGGTRCVQIR  159 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~i~~~~iv~~~  159 (438)
                      ...+.++|++.+.||+|+||.||+|++..+|+.||+|+++....       ..+.+.+|+.+++.+.|+||     ++++
T Consensus         7 ~~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~l~   81 (361)
T 2yab_A            7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI-----ITLH   81 (361)
T ss_dssp             CSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTB-----CCEE
T ss_pred             CCChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCC-----CcEE
Confidence            34577899999999999999999999999999999999975332       34678899999999988777     9999


Q ss_pred             ceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCc
Q 013678          160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  238 (438)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df  238 (438)
                      +++.+.+.+|+||||+ |++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++.      
T Consensus        82 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~------  153 (361)
T 2yab_A           82 DVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI------  153 (361)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTS------
T ss_pred             EEEEeCCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCC------
Confidence            9999999999999999 999999997654  7999999999999999999999999999999999999965441      


Q ss_pred             cccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCC
Q 013678          239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       239 ~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~  316 (438)
                                       ....+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus       154 -----------------~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~  216 (361)
T 2yab_A          154 -----------------PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS  216 (361)
T ss_dssp             -----------------SSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCC
T ss_pred             -----------------CccCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCC
Confidence                             1236889999988765433  234689999999999999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||.+.+..+.+..+......++..                                              ....+++++.
T Consensus       217 Pf~~~~~~~~~~~i~~~~~~~~~~----------------------------------------------~~~~~s~~~~  250 (361)
T 2yab_A          217 PFLGDTKQETLANITAVSYDFDEE----------------------------------------------FFSQTSELAK  250 (361)
T ss_dssp             SSCCSSHHHHHHHHHTTCCCCCHH----------------------------------------------HHTTSCHHHH
T ss_pred             CCCCCCHHHHHHHHHhcCCCCCch----------------------------------------------hccCCCHHHH
Confidence            999988877776665443333221                                              1234577899


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      +||.+||..||++|||+.|+|+||||+..
T Consensus       251 ~li~~~L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          251 DFIRKLLVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             HHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence            99999999999999999999999999853

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.4e-52  Score=398.11  Aligned_cols=287  Identities=29%  Similarity=0.451  Sum_probs=226.0

Q ss_pred             cCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           86 IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      .++.+.++|+++++||+|+||+||+|++. +++.||+|++....   .....+.+|+.+++.++|+||     +++++++
T Consensus        15 ~~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~   88 (311)
T 3niz_A           15 YFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI-----VSLIDVI   88 (311)
T ss_dssp             CEECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTB-----CCEEEEE
T ss_pred             eecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCE-----eeeeeEE
Confidence            35678899999999999999999999985 58899999987432   234678899999999988877     9999999


Q ss_pred             ccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          163 DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       163 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      .+++.+++||||+.++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++           
T Consensus        89 ~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~-----------  156 (311)
T 3niz_A           89 HSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDG-----------  156 (311)
T ss_dssp             CCSSCEEEEEECCSEEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-----------
T ss_pred             ccCCEEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCC-----------
Confidence            9999999999999779999987654 4699999999999999999999999999999999999997655           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                      .+||+|||++......   .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||
T Consensus       157 ----------------~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf  220 (311)
T 3niz_A          157 ----------------ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF  220 (311)
T ss_dssp             ----------------CEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ----------------CEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCC
Confidence                            5677777777654322   233578999999999987 45899999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      .+....+.+..+....+.++...+........ +....    +..               ..........+.+++++.+|
T Consensus       221 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~---------------~~~~~~~~~~~~~~~~~~~l  280 (311)
T 3niz_A          221 PGVTDDDQLPKIFSILGTPNPREWPQVQELPL-WKQRT----FQV---------------FEKKPWSSIIPGFCQEGIDL  280 (311)
T ss_dssp             CCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHH-HHSCC----CCC---------------CCCCCHHHHSTTCCHHHHHH
T ss_pred             CCCChHHHHHHHHHHHCCCChHHhhhhhccch-hhhcc----ccc---------------ccCCcHHHhCcccCHHHHHH
Confidence            99888888888888887665433221111000 00000    000               00001112234567899999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          399 LQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      |.+||++||++|||++|+|+||||++-.
T Consensus       281 i~~~L~~dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          281 LSNMLCFDPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             HHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred             HHHHcCCChhHCCCHHHHhcCcccccCC
Confidence            9999999999999999999999999753

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.6e-53  Score=401.50  Aligned_cols=193  Identities=22%  Similarity=0.264  Sum_probs=156.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC----
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN----  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~----  166 (438)
                      ..+|.+.++||+|+||+||+|++  +|+.||||+++...........|+..+..++|+||     |++++++.+.+    
T Consensus         2 ar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNI-----v~l~g~~~~~~~~~~   74 (303)
T 3hmm_A            2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI-----LGFIAADNKDNGTWT   74 (303)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTB-----CCEEEEEEEECSSSE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCC-----CcEEEEEEecCCCce
Confidence            46789999999999999999986  58899999997654433334456666667777776     99999987543    


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CceecCCCCCcEEEecCcccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL--------RLIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      .+||||||| +|+|.++++..   .++++.+.+++.|++.||+|||++        +||||||||+|||++.++      
T Consensus        75 ~~~lV~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~------  145 (303)
T 3hmm_A           75 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG------  145 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTS------
T ss_pred             EEEEEecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCC------
Confidence            689999999 99999999875   499999999999999999999987        999999999999997766      


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-------cccccCCCcchhHHHhCC------CCCcchhHHHH
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-------SYVVSTRHYRAPEVILGL------GWNYPCDLWSV  304 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~------~~~~~~DiwSl  304 (438)
                                           .+||+|||+|+......       ...+||+.|||||++.+.      .++.++|||||
T Consensus       146 ---------------------~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~  204 (303)
T 3hmm_A          146 ---------------------TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM  204 (303)
T ss_dssp             ---------------------CEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHH
T ss_pred             ---------------------CEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhH
Confidence                                 46666666665433221       235799999999999865      36789999999


Q ss_pred             HHHHHHHHhCCCCCCC
Q 013678          305 GCILVELCSGEALFQT  320 (438)
Q Consensus       305 G~il~elltg~~pf~~  320 (438)
                      ||+||||+||..||..
T Consensus       205 Gvvl~El~tg~~~~~~  220 (303)
T 3hmm_A          205 GLVFWEIARRCSIGGI  220 (303)
T ss_dssp             HHHHHHHHHTBCBTTB
T ss_pred             HHHHHHHHHCCCCCCc
Confidence            9999999999887754

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.1e-52  Score=405.01  Aligned_cols=251  Identities=24%  Similarity=0.393  Sum_probs=211.4

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .++|++++.||+|+||.||+|+++.+++.||||++++.    ....+...+|..++..+ +|++|     +++++++.+.
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~I-----v~l~~~~~~~   96 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL-----TQLFCCFQTP   96 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTB-----CCEEEEEECS
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCce-----eeEEEEEEeC
Confidence            37899999999999999999999999999999999753    23445677899999887 46665     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+||||||| |++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|             
T Consensus        97 ~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g-------------  161 (353)
T 3txo_A           97 DRLFFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG-------------  161 (353)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-------------
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCC-------------
Confidence            9999999999 999999998765  799999999999999999999999999999999999997666             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                    .+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.
T Consensus       162 --------------~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~  227 (353)
T 3txo_A          162 --------------HCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE  227 (353)
T ss_dssp             --------------CEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             --------------CEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC
Confidence                          46677777665422   1223468999999999999988999999999999999999999999998


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +..+....+......+|                                                  ..++.++.+||++
T Consensus       228 ~~~~~~~~i~~~~~~~p--------------------------------------------------~~~~~~~~~li~~  257 (353)
T 3txo_A          228 NEDDLFEAILNDEVVYP--------------------------------------------------TWLHEDATGILKS  257 (353)
T ss_dssp             SHHHHHHHHHHCCCCCC--------------------------------------------------TTSCHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCC--------------------------------------------------CCCCHHHHHHHHH
Confidence            88777766654322221                                                  2356789999999


Q ss_pred             ccccCCCCCCCH------HHHhcCCCCCCC
Q 013678          402 LLRYDPAERLKA------REALRHPFFTRD  425 (438)
Q Consensus       402 ~L~~dP~~Rpta------~ell~hp~f~~~  425 (438)
                      ||+.||++||++      +|+++||||++.
T Consensus       258 lL~~dP~~R~~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          258 FMTKNPTMRLGSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             HTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred             HhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence            999999999998      899999999863

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-52  Score=399.19  Aligned_cols=261  Identities=23%  Similarity=0.402  Sum_probs=225.1

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++.........+.+|+.+++.++|+||     +++++++.+.+.+
T Consensus         2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~~~~~~~~~~~~   76 (321)
T 1tki_A            2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNI-----LHLHESFESMEEL   76 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTB-----CCEEEEEEETTEE
T ss_pred             chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCC-----CeEeEEEecCCEE
Confidence            45689999999999999999999999999999999998766666778899999999988877     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      ++||||| +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.+                 
T Consensus        77 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~-----------------  138 (321)
T 1tki_A           77 VMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-----------------  138 (321)
T ss_dssp             EEEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-----------------
T ss_pred             EEEEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC-----------------
Confidence            9999999 899999997643 469999999999999999999999999999999999999652                 


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                              .+..+||+|||++.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus       139 --------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~  210 (321)
T 1tki_A          139 --------RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ  210 (321)
T ss_dssp             --------SCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             --------CCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH
Confidence                    13468899999887654433  33579999999999999889999999999999999999999999888877


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..+......++..                                              ....++.++.+||.+||..
T Consensus       211 ~~~~i~~~~~~~~~~----------------------------------------------~~~~~s~~~~~li~~~L~~  244 (321)
T 1tki_A          211 IIENIMNAEYTFDEE----------------------------------------------AFKEISIEAMDFVDRLLVK  244 (321)
T ss_dssp             HHHHHHHTCCCCCHH----------------------------------------------HHTTSCHHHHHHHHTTSCS
T ss_pred             HHHHHHcCCCCCChh----------------------------------------------hhccCCHHHHHHHHHHcCC
Confidence            776665543332211                                              1234577899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~  426 (438)
                      ||++|||+.|+|+||||++..
T Consensus       245 dp~~Rpt~~e~l~hp~~~~~~  265 (321)
T 1tki_A          245 ERKSRMTASEALQHPWLKQKI  265 (321)
T ss_dssp             SGGGSCCHHHHHHSHHHHSCG
T ss_pred             ChhHCcCHHHHhcChhhccCc
Confidence            999999999999999998764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=4.6e-52  Score=415.52  Aligned_cols=311  Identities=27%  Similarity=0.447  Sum_probs=217.7

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec--
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD--  163 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~--  163 (438)
                      .+.++|++++.||+|+||.||+|++..+++.||||++...   ....+.+.+|+.+|+.++|+||     +++++++.  
T Consensus        50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~l~~~~~~~  124 (458)
T 3rp9_A           50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV-----VKVLDIVIPK  124 (458)
T ss_dssp             CSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTB-----CCEEEECCCS
T ss_pred             ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCC-----CceEEEEecC
Confidence            4568999999999999999999999999999999998652   2345678899999999988877     99999884  


Q ss_pred             ---cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          164 ---YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       164 ---~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                         ....+|+||||++++|.+++....  .+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+
T Consensus       125 ~~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGl  202 (458)
T 3rp9_A          125 DVEKFDELYVVLEIADSDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGL  202 (458)
T ss_dssp             CTTTCCCEEEEECCCSEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred             CcccCceEEEEEeccccchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeeccccc
Confidence               346799999999999999998654  799999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCCcccCC---CCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHh-CCCCCcchhHHHHHHHHHHHHh---
Q 013678          241 LSRSSKDGSYFKNL---PKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCS---  313 (438)
Q Consensus       241 ~~~~~~~~~~~~~~---~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~ellt---  313 (438)
                      +.............   .......+.+|+............+||+.|+|||++. +..++.++|||||||+||||++   
T Consensus       203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~  282 (458)
T 3rp9_A          203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK  282 (458)
T ss_dssp             CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTST
T ss_pred             chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcc
Confidence            87654332211100   1112234455555444444455578999999999875 5569999999999999999998   


Q ss_pred             --------CCCCCCCCC--------------------hHHHHHHHHHHhCCCChHHHHHHhhhhh-hhhcCCCcccCCCC
Q 013678          314 --------GEALFQTHE--------------------NLEHLAMMERVLGPLPHHMVIRADRRAE-KYFRRGARLDWPDG  364 (438)
Q Consensus       314 --------g~~pf~~~~--------------------~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~  364 (438)
                              |.++|.+.+                    ..+++..|...+|.++.+.+........ .+....     +. 
T Consensus       283 ~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~-----~~-  356 (458)
T 3rp9_A          283 ENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIF-----PK-  356 (458)
T ss_dssp             TTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTS-----CC-
T ss_pred             ccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhc-----CC-
Confidence                    777786654                    3577888889999988766543321111 111100     00 


Q ss_pred             CCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          365 ATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                                    ..........+..++++.+||.+||++||++|||++|+|+||||++..
T Consensus       357 --------------~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~  404 (458)
T 3rp9_A          357 --------------REGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR  404 (458)
T ss_dssp             --------------CCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             --------------CCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence                          000111223345688999999999999999999999999999998753

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.3e-52  Score=404.35  Aligned_cols=282  Identities=27%  Similarity=0.495  Sum_probs=226.8

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+.++|++++.||+|+||.||+|.+..+|+.||||++...   ....+.+.+|+.+++.++|+||     +++++++...
T Consensus        22 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~l~~~~~~~   96 (367)
T 1cm8_A           22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV-----IGLLDVFTPD   96 (367)
T ss_dssp             CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTB-----CCCSEEECSC
T ss_pred             eecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCC-----CCceeeEecC
Confidence            3568999999999999999999999999999999998542   2345677899999999998877     9999988765


Q ss_pred             ------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          166 ------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       166 ------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                            ..+|+||||++++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++        
T Consensus        97 ~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~--------  165 (367)
T 1cm8_A           97 ETLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC--------  165 (367)
T ss_dssp             SSTTTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC--------
T ss_pred             CccccCceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCC--------
Confidence                  357999999999999999874   599999999999999999999999999999999999997655        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                         .+||+|||++..........+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||
T Consensus       166 -------------------~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf  226 (367)
T 1cm8_A          166 -------------------ELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLF  226 (367)
T ss_dssp             -------------------CEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             -------------------CEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCC
Confidence                               5788888887776655556789999999999988 67999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhh-hhhhhcCCCcccCCCCCCChhhHHHHHHhccc-hhhhhhccCCchhHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRR-AEKYFRRGARLDWPDGATSRDSMRAVWKLLRL-PNLIMQHVDHSAGDLI  396 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~  396 (438)
                      .+.+..+++..+.+..|.+|..+....... ...+....                     ... ...........++.+.
T Consensus       227 ~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~  285 (367)
T 1cm8_A          227 KGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGL---------------------PELEKKDFASILTNASPLAV  285 (367)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHS---------------------CCCCCCCGGGTCTTCCHHHH
T ss_pred             CCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhC---------------------CCCCCCCHHHHCCCCCHHHH
Confidence            999999999999999999998775433211 11111000                     000 0011122345678999


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +||.+||+.||++|||++|+|+||||++..
T Consensus       286 ~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          286 NLLEKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             HHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence            999999999999999999999999998743

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=4e-52  Score=395.60  Aligned_cols=250  Identities=26%  Similarity=0.405  Sum_probs=217.3

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++++.||+|+||.||+|++..+|+.||+|++++..    ...+.+.+|+.+++.+.|+||     +++++++.+.+.
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~I-----v~~~~~~~~~~~   80 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFI-----IRMWGTFQDAQQ   80 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTB-----CCEEEEEECSSE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCC-----ceEeEEEEeCCE
Confidence            67999999999999999999999999999999997532    234667789999998888777     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|               
T Consensus        81 ~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g---------------  143 (318)
T 1fot_A           81 IFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG---------------  143 (318)
T ss_dssp             EEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTS---------------
T ss_pred             EEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCC---------------
Confidence            99999999 899999998764  799999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                                  .+||+|||++..........+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+....
T Consensus       144 ------------~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  211 (318)
T 1fot_A          144 ------------HIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT  211 (318)
T ss_dssp             ------------CEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             ------------CEEEeecCcceecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH
Confidence                        57777788777665555567899999999999999999999999999999999999999988877666


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      ...+......+                                                  +..+++++.+||.+||+.|
T Consensus       212 ~~~i~~~~~~~--------------------------------------------------p~~~~~~~~~li~~lL~~d  241 (318)
T 1fot_A          212 YEKILNAELRF--------------------------------------------------PPFFNEDVKDLLSRLITRD  241 (318)
T ss_dssp             HHHHHHCCCCC--------------------------------------------------CTTSCHHHHHHHHHHTCSC
T ss_pred             HHHHHhCCCCC--------------------------------------------------CCCCCHHHHHHHHHHhccC
Confidence            65554321111                                                  1245678999999999999


Q ss_pred             CCCCC-----CHHHHhcCCCCCCC
Q 013678          407 PAERL-----KAREALRHPFFTRD  425 (438)
Q Consensus       407 P~~Rp-----ta~ell~hp~f~~~  425 (438)
                      |++|+     +++|+++||||++.
T Consensus       242 p~~R~~~~~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          242 LSQRLGNLQNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             TTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             HHHcCCCcCCCHHHHhcCccccCC
Confidence            99999     99999999999863

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=3e-51  Score=398.63  Aligned_cols=322  Identities=30%  Similarity=0.518  Sum_probs=247.9

Q ss_pred             CceeeecCCccC-CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCC------CC
Q 013678           80 GHYVFAIGENLT-PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI------GG  152 (438)
Q Consensus        80 ~~~~~~~~~~~~-~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i------~~  152 (438)
                      ++++...++.+. ++|++.+.||+|+||.||+|++..+++.||||++.......+.+.+|+.+++.+.|.+.      .|
T Consensus         6 ~~~p~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~   85 (373)
T 1q8y_A            6 GYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA   85 (373)
T ss_dssp             -CCCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHH
T ss_pred             CceeeecCCcccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhcccc
Confidence            455555666554 79999999999999999999999999999999998766667788999999999986532      24


Q ss_pred             cceEEecceeccCC----eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEE
Q 013678          153 TRCVQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILL  227 (438)
Q Consensus       153 ~~iv~~~~~~~~~~----~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli  227 (438)
                      +|++++++++...+    .+++||||++++|.+++.......+++..++.++.||+.||+|||++ ||+||||||+|||+
T Consensus        86 ~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll  165 (373)
T 1q8y_A           86 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM  165 (373)
T ss_dssp             TTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEE
T ss_pred             chHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEE
Confidence            56699999987644    89999999999999999886656799999999999999999999998 99999999999999


Q ss_pred             ecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHH
Q 013678          228 VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI  307 (438)
Q Consensus       228 ~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i  307 (438)
                      +.++.                     .+....+||+|||++...........||+.|+|||++.+..++.++|||||||+
T Consensus       166 ~~~~~---------------------~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~i  224 (373)
T 1q8y_A          166 EIVDS---------------------PENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACL  224 (373)
T ss_dssp             EEEET---------------------TTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHH
T ss_pred             eccCC---------------------CcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHH
Confidence            75441                     012346899999999877766666789999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcc-cCCCCCCChhhHHHHHHhccc
Q 013678          308 LVELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARL-DWPDGATSRDSMRAVWKLLRL  380 (438)
Q Consensus       308 l~elltg~~pf~~~~------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  380 (438)
                      +|+|++|..||.+.+      ..+.+..+...++.+|..++....... .++...... .........  ......    
T Consensus       225 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~----  297 (373)
T 1q8y_A          225 IFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTR-TFFNSRGLLRNISKLKFWP--LEDVLT----  297 (373)
T ss_dssp             HHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHH-HHBCC--CBSSCCCCCBCC--HHHHHH----
T ss_pred             HHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhh-hhcCCcchhcccccccccc--hhhhhh----
Confidence            999999999998654      566788888899999987765544322 222221111 111111110  011000    


Q ss_pred             hhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCCcee
Q 013678          381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL  431 (438)
Q Consensus       381 ~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~~~~  431 (438)
                        .........+.++.+||.+||+.||++|||+.|+|+||||++.......
T Consensus       298 --~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~~  346 (373)
T 1q8y_A          298 --EKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEI  346 (373)
T ss_dssp             --HTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTCTTC
T ss_pred             --hcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccCcccc
Confidence              0111223456789999999999999999999999999999987654443

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=6e-52  Score=397.26  Aligned_cols=250  Identities=25%  Similarity=0.411  Sum_probs=212.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++++.||+|+||.||+|+++.+|+.||||++++.    ......+.+|+.+++.++|++|     +++++++.+.+.
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~l~~~~~~~~~   79 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL-----TALKYAFQTHDR   79 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTB-----CCEEEEEECSSE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcC-----cceEEEEEeCCE
Confidence            6899999999999999999999999999999999753    2344667889999998887776     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|+||||+ |++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|               
T Consensus        80 ~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g---------------  142 (337)
T 1o6l_A           80 LCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG---------------  142 (337)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS---------------
T ss_pred             EEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCC---------------
Confidence            99999999 999999998764  799999999999999999999999999999999999997766               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                  .+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+.
T Consensus       143 ------------~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  210 (337)
T 1o6l_A          143 ------------HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH  210 (337)
T ss_dssp             ------------CEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ------------CEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH
Confidence                        46666666665422   122346899999999999999999999999999999999999999988776


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      ......+......                                                  .+..+++++.+||.+||
T Consensus       211 ~~~~~~i~~~~~~--------------------------------------------------~p~~~s~~~~~li~~lL  240 (337)
T 1o6l_A          211 ERLFELILMEEIR--------------------------------------------------FPRTLSPEAKSLLAGLL  240 (337)
T ss_dssp             HHHHHHHHHCCCC--------------------------------------------------CCTTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCCC--------------------------------------------------CCCCCCHHHHHHHHHHh
Confidence            6655554332111                                                  12245778999999999


Q ss_pred             ccCCCCCC-----CHHHHhcCCCCCCC
Q 013678          404 RYDPAERL-----KAREALRHPFFTRD  425 (438)
Q Consensus       404 ~~dP~~Rp-----ta~ell~hp~f~~~  425 (438)
                      +.||++||     +++|+++||||++.
T Consensus       241 ~~dP~~R~g~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          241 KKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             CSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             hcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence            99999999     99999999999763

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.2e-51  Score=394.06  Aligned_cols=263  Identities=25%  Similarity=0.454  Sum_probs=223.8

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh-------hHHHHHHHHHHHHHHHhcCCCCcceEEecc
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~  160 (438)
                      +.+.++|++.+.||+|+||.||+|.+..+++.||+|++.....       ..+.+.+|+.+++.++|+||     +++++
T Consensus         7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~   81 (326)
T 2y0a_A            7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV-----ITLHE   81 (326)
T ss_dssp             SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTB-----CCEEE
T ss_pred             CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCC-----CcEEE
Confidence            4567889999999999999999999999999999999975321       35678899999999988877     99999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                      ++.+.+.+++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.       
T Consensus        82 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~-------  152 (326)
T 2y0a_A           82 VYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV-------  152 (326)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHTTSS--CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSS-------
T ss_pred             EEEeCCEEEEEEEcCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCC-------
Confidence            999999999999999 999999997654  7999999999999999999999999999999999999976541       


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCC--CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                      ....+||+|||++.....  ......||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       153 ----------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  216 (326)
T 2y0a_A          153 ----------------PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP  216 (326)
T ss_dssp             ----------------SSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCS
T ss_pred             ----------------CCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCC
Confidence                            233688999998876542  23346799999999999998999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+....+.+..+.......+..                                              .....+..+.+
T Consensus       217 f~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~  250 (326)
T 2y0a_A          217 FLGDTKQETLANVSAVNYEFEDE----------------------------------------------YFSNTSALAKD  250 (326)
T ss_dssp             SCCSSHHHHHHHHHHTCCCCCHH----------------------------------------------HHTTSCHHHHH
T ss_pred             CCCCCHHHHHHHHHhcCCCcCcc----------------------------------------------ccccCCHHHHH
Confidence            99887777666665443332221                                              12345678999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          398 LLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      ||.+||+.||++|||+.|+|+||||+...
T Consensus       251 li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          251 FIRRLLVKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             HHHHHccCChhhCCCHHHHhcCCCccCCc
Confidence            99999999999999999999999998753

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=9.4e-52  Score=388.77  Aligned_cols=280  Identities=29%  Similarity=0.474  Sum_probs=221.9

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ++|+++++||+|+||+||+|++..+++.||||++....   .....+.+|+.+++.++|+||     +++++++.+++.+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~   76 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI-----VRLHDVLHSDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEETTEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCE-----eeEEeEEEeCCEE
Confidence            57999999999999999999999999999999997432   334677899999999988777     9999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      ++||||++++|.+.+.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++                 
T Consensus        77 ~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~-----------------  138 (292)
T 3o0g_A           77 TLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG-----------------  138 (292)
T ss_dssp             EEEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-----------------
T ss_pred             EEEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-----------------
Confidence            9999999778888877643 4799999999999999999999999999999999999997655                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHhCCCC-CCCCCh
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEAL-FQTHEN  323 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~p-f~~~~~  323 (438)
                                .+||+|||++......   .....||+.|+|||++.+.. ++.++|||||||++|+|++|..| |.+.+.
T Consensus       139 ----------~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~  208 (292)
T 3o0g_A          139 ----------ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV  208 (292)
T ss_dssp             ----------CEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH
T ss_pred             ----------CEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH
Confidence                      5677777777654322   23357899999999998876 89999999999999999987777 667777


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .+.+..+.+..+.++...+........       ...++..              ............++.++.+||.+||
T Consensus       209 ~~~~~~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~--------------~~~~~~~~~~~~~~~~~~~li~~~L  267 (292)
T 3o0g_A          209 DDQLKRIFRLLGTPTEEQWPSMTKLPD-------YKPYPMY--------------PATTSLVNVVPKLNATGRDLLQNLL  267 (292)
T ss_dssp             HHHHHHHHHHHCCCCTTTCTTGGGSTT-------CCCCCCC--------------CTTCCCTTTSTTCCHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhCCCChhhhhhhccccc-------ccccccc--------------cCCcchhhcccccChHHHHHHHHHh
Confidence            788888888887766543222111000       0000000              0000111223456789999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCC
Q 013678          404 RYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      +.||++|||++|+|+||||++.
T Consensus       268 ~~dP~~R~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          268 KCNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             CSSGGGSCCHHHHHTSGGGTTC
T ss_pred             ccChhhCCCHHHHhcCcccccC
Confidence            9999999999999999999874

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=9.3e-52  Score=389.78  Aligned_cols=256  Identities=26%  Similarity=0.396  Sum_probs=216.1

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ..++|++.++||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+++.++|+||     +++++++..++.+
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~~~   92 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI-----VNYLDSYLVGDEL   92 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTB-----CCEEEEEEETTEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCC-----CeEeEEEEECCEE
Confidence            4578999999999999999999999999999999986533 345678899999999988877     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      |+||||+ +++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++                
T Consensus        93 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~----------------  153 (297)
T 3fxz_A           93 WVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG----------------  153 (297)
T ss_dssp             EEEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC----------------
T ss_pred             EEEEECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCC----------------
Confidence            9999999 99999999875   499999999999999999999999999999999999997655                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                 .+||+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus       154 -----------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  222 (297)
T 3fxz_A          154 -----------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL  222 (297)
T ss_dssp             -----------CEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred             -----------CEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                       5677777776544322   23357999999999999999999999999999999999999999887776


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      .....+.......                                               ......++..+.+||.+||+
T Consensus       223 ~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~li~~~l~  255 (297)
T 3fxz_A          223 RALYLIATNGTPE-----------------------------------------------LQNPEKLSAIFRDFLNRCLE  255 (297)
T ss_dssp             HHHHHHHHHCSCC-----------------------------------------------CSCGGGSCHHHHHHHHHHSC
T ss_pred             HHHHHHHhCCCCC-----------------------------------------------CCCccccCHHHHHHHHHHcc
Confidence            6555443321100                                               01123456789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      .||++|||+.|+|+||||+....
T Consensus       256 ~dp~~Rps~~ell~h~~~~~~~~  278 (297)
T 3fxz_A          256 MDVEKRGSAKELLQHQFLKIAKP  278 (297)
T ss_dssp             SSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             CChhHCcCHHHHhhChhhcccCc
Confidence            99999999999999999987643

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=6.1e-52  Score=401.58  Aligned_cols=266  Identities=24%  Similarity=0.403  Sum_probs=223.0

Q ss_pred             eeeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEe
Q 013678           82 YVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQI  158 (438)
Q Consensus        82 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~  158 (438)
                      +....+..+.++|++.+.||+|+||.||+|.+..+++.||+|++....   ...+.+.+|+.+++.++|+||     +++
T Consensus        19 ~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~~   93 (362)
T 2bdw_A           19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI-----VRL   93 (362)
T ss_dssp             -----CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTB-----CCE
T ss_pred             EeecCCCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCC-----CeE
Confidence            444556677889999999999999999999999999999999997532   344668899999999988877     999


Q ss_pred             cceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 013678          159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       159 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      ++++.+.+..|+||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++      
T Consensus        94 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~------  165 (362)
T 2bdw_A           94 HDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA------  165 (362)
T ss_dssp             EEEEECSSEEEEEECCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSS------
T ss_pred             EEEEEeCCEEEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC------
Confidence            99999999999999999 899999997654  799999999999999999999999999999999999997543      


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCC
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~  315 (438)
                                        ....+||+|||++.......  ....||+.|+|||++.+..++.++|||||||++|+|++|.
T Consensus       166 ------------------~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  227 (362)
T 2bdw_A          166 ------------------KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY  227 (362)
T ss_dssp             ------------------TTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ------------------CCCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCC
Confidence                              23468999999887655432  2358999999999999989999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      .||.+.+.......+......+|.                                              .....+++++
T Consensus       228 ~Pf~~~~~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~~~~~  261 (362)
T 2bdw_A          228 PPFWDEDQHRLYAQIKAGAYDYPS----------------------------------------------PEWDTVTPEA  261 (362)
T ss_dssp             CSSCCSSHHHHHHHHHHTCCCCCT----------------------------------------------TGGGGSCHHH
T ss_pred             CCCCCCCHHHHHHHHHhCCCCCCc----------------------------------------------ccccCCCHHH
Confidence            999988777666665543222221                                              1112456789


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          396 IDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      .+||.+||+.||++|||+.|+|+||||+.
T Consensus       262 ~~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          262 KSLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             HHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence            99999999999999999999999999975

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.8e-52  Score=406.58  Aligned_cols=323  Identities=25%  Similarity=0.401  Sum_probs=220.5

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHH-hcCCCCcceEEeccee
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWF  162 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~  162 (438)
                      +..+.++|++++.||+|+||.||+|.+..+++.||||++...   ........+|+.++..+. |+||     +++++++
T Consensus         4 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~ni-----v~l~~~~   78 (388)
T 3oz6_A            4 DRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENI-----VNLLNVL   78 (388)
T ss_dssp             CHHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTB-----CCEEEEE
T ss_pred             cCcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCC-----CeeeeEE
Confidence            456678999999999999999999999999999999998542   344566788999999997 7766     9999998


Q ss_pred             ccC--CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          163 DYR--NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       163 ~~~--~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                      ...  ..+|+|||||+++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        79 ~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~  155 (388)
T 3oz6_A           79 RADNDRDVYLVFDYMETDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGL  155 (388)
T ss_dssp             ECTTSSCEEEEEECCSEEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             ecCCCCEEEEEecccCcCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcc
Confidence            644  479999999988999999874   599999999999999999999999999999999999998888777777766


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCC-cccCCCCcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGST-TFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a-~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                      +.............    ...+.+.... ..........+||+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus       156 a~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf  231 (388)
T 3oz6_A          156 SRSFVNIRRVTNNI----PLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF  231 (388)
T ss_dssp             CEESSSCCCCCCCG----GGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             cccccccccccccc----cccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCC
Confidence            55432211100000    0000000000 000111233589999999999987 56899999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhh-hhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRA-EKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      .+.+..+++..+...++.++...+....... ..+..................... |.   ............++++.+
T Consensus       232 ~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~d  307 (388)
T 3oz6_A          232 PGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTK-WK---NLLLKINPKADCNEEALD  307 (388)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHH-HH---HHHHHHCTTCCCCHHHHH
T ss_pred             CCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcc-hh---hhcccccccccCCHHHHH
Confidence            9999999999999998888766543211000 000000000000000000000000 00   000011122356789999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          398 LLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      ||.+||++||++|||++|+|+||||+.-
T Consensus       308 ll~~~L~~dP~~R~t~~e~l~Hp~~~~~  335 (388)
T 3oz6_A          308 LLDKLLQFNPNKRISANDALKHPFVSIF  335 (388)
T ss_dssp             HHHHHCCSSGGGSCCHHHHTTSTTTTTT
T ss_pred             HHHHhhccCcccCCCHHHHhCCHHHHHh
Confidence            9999999999999999999999999764

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.7e-51  Score=407.85  Aligned_cols=261  Identities=25%  Similarity=0.412  Sum_probs=221.7

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      +..+.++|++.+.||+|+||.||+|.+..+|+.||+|++....   ...+.+.+|+.+++.++|+||     +++++++.
T Consensus         6 ~~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~l~~~~~   80 (444)
T 3soa_A            6 CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNI-----VRLHDSIS   80 (444)
T ss_dssp             -CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTB-----CCEEEEEE
T ss_pred             cccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCC-----CeEEEEEE
Confidence            3456789999999999999999999999999999999997533   345667899999999988877     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      +.+..|+||||| |++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.+.           
T Consensus        81 ~~~~~~lv~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~-----------  147 (444)
T 3soa_A           81 EEGHHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKL-----------  147 (444)
T ss_dssp             CSSEEEEEECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSS-----------
T ss_pred             ECCEEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccC-----------
Confidence            999999999999 999999998765  799999999999999999999999999999999999997532           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                   .+..+||+|||++.......   ....||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       148 -------------~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~  214 (444)
T 3soa_A          148 -------------KGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFW  214 (444)
T ss_dssp             -------------TTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             -------------CCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCC
Confidence                         23468999999887654432   23589999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      +.+..+....+......+|.                                              .....+++++.+||
T Consensus       215 ~~~~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li  248 (444)
T 3soa_A          215 DEDQHRLYQQIKAGAYDFPS----------------------------------------------PEWDTVTPEAKDLI  248 (444)
T ss_dssp             CSSHHHHHHHHHHTCCCCCT----------------------------------------------TTTTTSCHHHHHHH
T ss_pred             CccHHHHHHHHHhCCCCCCc----------------------------------------------cccccCCHHHHHHH
Confidence            88877777666553322221                                              11234577899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCC
Q 013678          400 QGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      .+||+.||++|||+.|+|+||||+.
T Consensus       249 ~~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          249 NKMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             HHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             HHHcCCChhHCCCHHHHhcCccccC
Confidence            9999999999999999999999965

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1e-51  Score=396.78  Aligned_cols=251  Identities=25%  Similarity=0.373  Sum_probs=213.7

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .++|++.+.||+|+||.||+|+++.+++.||||++++..    ...+....|..++..+ .|++|     +++++++.+.
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~i-----v~l~~~~~~~   90 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL-----THMFCTFQTK   90 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTB-----CCEEEEEECS
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCC-----CcEEEEEEeC
Confidence            478999999999999999999999999999999997532    3445677899999887 67666     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+|+||||+ |++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|             
T Consensus        91 ~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g-------------  155 (345)
T 1xjd_A           91 ENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG-------------  155 (345)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-------------
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCC-------------
Confidence            9999999999 999999998764  699999999999999999999999999999999999997666             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                    .+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.
T Consensus       156 --------------~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  221 (345)
T 1xjd_A          156 --------------HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ  221 (345)
T ss_dssp             --------------CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             --------------CEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC
Confidence                          46666666665422   2233468999999999999999999999999999999999999999988


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +..+....+......+                                                  +..++.++.+||.+
T Consensus       222 ~~~~~~~~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~  251 (345)
T 1xjd_A          222 DEEELFHSIRMDNPFY--------------------------------------------------PRWLEKEAKDLLVK  251 (345)
T ss_dssp             SHHHHHHHHHHCCCCC--------------------------------------------------CTTSCHHHHHHHHH
T ss_pred             CHHHHHHHHHhCCCCC--------------------------------------------------CcccCHHHHHHHHH
Confidence            7776665554321111                                                  12356789999999


Q ss_pred             ccccCCCCCCCHH-HHhcCCCCCCC
Q 013678          402 LLRYDPAERLKAR-EALRHPFFTRD  425 (438)
Q Consensus       402 ~L~~dP~~Rpta~-ell~hp~f~~~  425 (438)
                      ||+.||++||++. ++++||||++-
T Consensus       252 lL~~dp~~R~~~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          252 LFVREPEKRLGVRGDIRQHPLFREI  276 (345)
T ss_dssp             HSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             HhcCCHhHcCCChHHHHcCccccCC
Confidence            9999999999998 99999999864

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1e-51  Score=397.94  Aligned_cols=251  Identities=26%  Similarity=0.413  Sum_probs=218.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      .++|++++.||+|+||.||+|++..+|+.||||++++..    ...+.+.+|+.+++.++|++|     +++++++.+.+
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~  114 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL-----VKLEFSFKDNS  114 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTB-----CCEEEEEECSS
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEEcCC
Confidence            478999999999999999999999999999999997532    234667889999998877776     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      .+|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|              
T Consensus       115 ~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g--------------  178 (350)
T 1rdq_E          115 NLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--------------  178 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--------------
T ss_pred             EEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCC--------------
Confidence            999999999 999999998765  699999999999999999999999999999999999997655              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                   .+||+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus       179 -------------~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  245 (350)
T 1rdq_E          179 -------------YIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ  245 (350)
T ss_dssp             -------------CEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             -------------CEEEcccccceeccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH
Confidence                         5777888877766655556789999999999999999999999999999999999999999887776


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+......+                                                  +..++.++.+||.+||+.
T Consensus       246 ~~~~i~~~~~~~--------------------------------------------------p~~~~~~~~~li~~lL~~  275 (350)
T 1rdq_E          246 IYEKIVSGKVRF--------------------------------------------------PSHFSSDLKDLLRNLLQV  275 (350)
T ss_dssp             HHHHHHHCCCCC--------------------------------------------------CTTCCHHHHHHHHHHSCS
T ss_pred             HHHHHHcCCCCC--------------------------------------------------CCCCCHHHHHHHHHHhhc
Confidence            666554421111                                                  124567899999999999


Q ss_pred             CCCCCCC-----HHHHhcCCCCCCC
Q 013678          406 DPAERLK-----AREALRHPFFTRD  425 (438)
Q Consensus       406 dP~~Rpt-----a~ell~hp~f~~~  425 (438)
                      ||++||+     ++|+++||||++.
T Consensus       276 dp~~R~~~~~~~~~ei~~h~~f~~~  300 (350)
T 1rdq_E          276 DLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             CTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             CHHhccCCccCCHHHHHhCcCcCCC
Confidence            9999998     9999999999863

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=5.6e-51  Score=404.28  Aligned_cols=302  Identities=26%  Similarity=0.403  Sum_probs=222.6

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+.++|++.+.||+|+||.||+|++..+++.||||++...   ....+.+.+|+.+|+.++|+||     +++++++...
T Consensus        23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-----v~l~~~~~~~   97 (432)
T 3n9x_A           23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI-----IRLYDLIIPD   97 (432)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTB-----CCEEEECCCS
T ss_pred             eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCc-----ceEEEEEecC
Confidence            4678999999999999999999999999999999999752   2345678899999999988877     9999998765


Q ss_pred             -----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          166 -----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       166 -----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                           +.+|+||||++++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        98 ~~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGl  175 (432)
T 3n9x_A           98 DLLKFDELYIVLEIADSDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGL  175 (432)
T ss_dssp             CTTTCCCEEEEEECCSEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             CCCcCCeEEEEEecCCcCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCC
Confidence                 5799999999889999998654  799999999999999999999999999999999999998877666666666


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCC-------cccCCCCcccccCCCcchhHHHh-CCCCCcchhHHHHHHHHHHHH
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGST-------TFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELC  312 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a-------~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlG~il~ell  312 (438)
                      +.........         ....++...       ..........+||+.|+|||++. +..++.++|||||||++|||+
T Consensus       176 a~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell  246 (432)
T 3n9x_A          176 ARTINSEKDT---------NIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL  246 (432)
T ss_dssp             CEEC----------------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred             cccccccccc---------cccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHH
Confidence            5443221110         000000000       00001124468999999999975 456999999999999999999


Q ss_pred             h-----------CCCCCCCCC-----------------hHHHHHHHHHHhCCCChHHHHHHhhh-hhhhhcCCCcccCCC
Q 013678          313 S-----------GEALFQTHE-----------------NLEHLAMMERVLGPLPHHMVIRADRR-AEKYFRRGARLDWPD  363 (438)
Q Consensus       313 t-----------g~~pf~~~~-----------------~~~~~~~i~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~  363 (438)
                      +           |.++|.+.+                 ..+++..+...+|.++...+...... ...+.....      
T Consensus       247 ~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~------  320 (432)
T 3n9x_A          247 NMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFP------  320 (432)
T ss_dssp             TTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSC------
T ss_pred             hcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCC------
Confidence            8           455555543                 36788889999999887665432111 111111000      


Q ss_pred             CCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          364 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                                    ...+.......+.+++++.+||.+||++||++|||++|+|+||||++..
T Consensus       321 --------------~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  369 (432)
T 3n9x_A          321 --------------HRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVR  369 (432)
T ss_dssp             --------------CCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTC
T ss_pred             --------------CCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhcc
Confidence                          0001111222345788999999999999999999999999999999753

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2.4e-51  Score=385.19  Aligned_cols=279  Identities=28%  Similarity=0.476  Sum_probs=217.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ++|++++.||+|+||.||+|++ .+++.||+|++....   ...+.+.+|+.+++.++|+||     +++++++.+.+.+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~   75 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI-----VKLYDVIHTKKRL   75 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTB-----CCEEEEEECSSCE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCE-----eeeeeEEccCCeE
Confidence            5799999999999999999998 678899999986432   224677899999999988777     9999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      ++||||+.++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++                 
T Consensus        76 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-----------------  137 (288)
T 1ob3_A           76 VLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG-----------------  137 (288)
T ss_dssp             EEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS-----------------
T ss_pred             EEEEEecCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC-----------------
Confidence            9999999779999998653 4699999999999999999999999999999999999997665                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                .+||+|||++......   .....||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..
T Consensus       138 ----------~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~  207 (288)
T 1ob3_A          138 ----------ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA  207 (288)
T ss_dssp             ----------CEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             ----------CEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                      4666777766543321   2234789999999999865 5899999999999999999999999999988


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +.+..+.+..+..+...+....... .+     ...+...               .+.........+++++.+||.+||+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~---------------~~~~~~~~~~~~~~~~~~li~~~L~  266 (288)
T 1ob3_A          208 DQLMRIFRILGTPNSKNWPNVTELP-KY-----DPNFTVY---------------EPLPWESFLKGLDESGIDLLSKMLK  266 (288)
T ss_dssp             HHHHHHHHHHCCCCTTTSTTGGGST-TC-----CTTCCCC---------------CCCCGGGTCCSCCHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHCCCChhhchhhhccc-cc-----ccccccc---------------cCccHHHHhhhcCHHHHHHHHHHcC
Confidence            8888888877765532211110000 00     0000000               0000112234567899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .||++|||++|+|+||||++.
T Consensus       267 ~dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          267 LDPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             SSTTTSCCHHHHHTSGGGGC-
T ss_pred             CCcccCCCHHHHhcCcchhhc
Confidence            999999999999999999864

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=1.6e-51  Score=397.32  Aligned_cols=260  Identities=27%  Similarity=0.401  Sum_probs=215.4

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch------hhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||++....      ...+.+.+|+.+++.++|+||     +++++++
T Consensus        21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~~~~~~   95 (351)
T 3c0i_A           21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI-----VELLETY   95 (351)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTB-----CCEEEEE
T ss_pred             ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCC-----CcEEEEE
Confidence            45689999999999999999999999999999999986432      135678899999999988877     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                      .+.+.+|+||||| +++|.+++...  ....+++..++.++.||+.||+|||++||+||||||+|||++.++        
T Consensus        96 ~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~--------  167 (351)
T 3c0i_A           96 SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE--------  167 (351)
T ss_dssp             EETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSS--------
T ss_pred             EeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCC--------
Confidence            9999999999999 89999888643  224589999999999999999999999999999999999997644        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~  316 (438)
                                      ....+||+|||++.......   ...+||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus       168 ----------------~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  231 (351)
T 3c0i_A          168 ----------------NSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCL  231 (351)
T ss_dssp             ----------------TTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ----------------CCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCC
Confidence                            23458899999887654432   33579999999999999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||.+.. ......+.......+.                                              .....+++++.
T Consensus       232 pf~~~~-~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~  264 (351)
T 3c0i_A          232 PFYGTK-ERLFEGIIKGKYKMNP----------------------------------------------RQWSHISESAK  264 (351)
T ss_dssp             SSCSSH-HHHHHHHHHTCCCCCH----------------------------------------------HHHTTSCHHHH
T ss_pred             CCCCcH-HHHHHHHHcCCCCCCc----------------------------------------------cccccCCHHHH
Confidence            998743 3333333221111110                                              11234577899


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      +||.+||+.||++|||+.|+|+||||++
T Consensus       265 ~li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          265 DLVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             HHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence            9999999999999999999999999986

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=7.3e-52  Score=395.40  Aligned_cols=284  Identities=29%  Similarity=0.474  Sum_probs=220.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhh--HHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY--REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ++|+++++||+|+||.||+|++..+++.||||+++.....  ...+.+|+.+++.++|+||     +++++++.+.+..|
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~   76 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI-----VTLHDIIHTEKSLT   76 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTB-----CCEEEEEECSSCEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCC-----CeeeeEEeeCCEEE
Confidence            5799999999999999999999999999999998753321  1234579999999888776     99999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      +||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++                  
T Consensus        77 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~------------------  137 (324)
T 3mtl_A           77 LVFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERG------------------  137 (324)
T ss_dssp             EEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTC------------------
T ss_pred             EEecccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCC------------------
Confidence            999999889999998754 4699999999999999999999999999999999999997665                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                               .+||+|||++......   .....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+
T Consensus       138 ---------~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  208 (324)
T 3mtl_A          138 ---------ELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE  208 (324)
T ss_dssp             ---------CEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             ---------CEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                     4666666666543322   223478999999999987 468999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..+.+..+.++...+..........     ...++.               ............+++++.+||.+||++
T Consensus       209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---------------~~~~~~~~~~~~~~~~~~~li~~~L~~  268 (324)
T 3mtl_A          209 QLHFIFRILGTPTEETWPGILSNEEFK-----TYNYPK---------------YRAEALLSHAPRLDSDGADLLTKLLQF  268 (324)
T ss_dssp             HHHHHHHHHCCCCTTTSTTGGGCHHHH-----HTCCCC---------------CCCCCHHHHCTTSCHHHHHHHHHHSCS
T ss_pred             HHHHHHHHhCCCChHhchhhhcchhhc-----cccccc---------------ccchhhhhhcCCCCHHHHHHHHHHcCc
Confidence            999999988877654322211110000     000000               001111223456778999999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      ||++|||++|+|+||||++...+
T Consensus       269 dP~~R~t~~e~l~hp~f~~~~~~  291 (324)
T 3mtl_A          269 EGRNRISAEDAMKHPFFLSLGER  291 (324)
T ss_dssp             SGGGSCCHHHHTTSGGGGGGCST
T ss_pred             CcccCCCHHHHhcChhhhhcccc
Confidence            99999999999999999876544

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=5.5e-51  Score=397.81  Aligned_cols=251  Identities=22%  Similarity=0.390  Sum_probs=206.6

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .++|++++.||+|+||.||+|+++.+++.||||++++..    ...+.+.+|..++.++ +|+||     +++++++.+.
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~I-----v~l~~~~~~~  125 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL-----VGLHSCFQTE  125 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTB-----CCEEEEEECS
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCc-----CeeEEEEEEC
Confidence            368999999999999999999999999999999997542    2234577899999887 67666     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+||||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|             
T Consensus       126 ~~~~lV~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g-------------  190 (396)
T 4dc2_A          126 SRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG-------------  190 (396)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-------------
T ss_pred             CEEEEEEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCC-------------
Confidence            9999999999 999999998764  799999999999999999999999999999999999997666             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCccc---CCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFE---HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                    .+||+|||++...   .......+||+.|+|||++.+..++.++|||||||++|||++|..||...
T Consensus       191 --------------~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~  256 (396)
T 4dc2_A          191 --------------HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV  256 (396)
T ss_dssp             --------------CEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred             --------------CEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence                          4667777766542   12234468999999999999999999999999999999999999999643


Q ss_pred             ChHH---------HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCch
Q 013678          322 ENLE---------HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  392 (438)
Q Consensus       322 ~~~~---------~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (438)
                      ...+         ....+...                                                  ....+..++
T Consensus       257 ~~~~~~~~~~~~~~~~~i~~~--------------------------------------------------~~~~p~~~s  286 (396)
T 4dc2_A          257 GSSDNPDQNTEDYLFQVILEK--------------------------------------------------QIRIPRSLS  286 (396)
T ss_dssp             TC------CCHHHHHHHHHHC--------------------------------------------------CCCCCTTSC
T ss_pred             ccccccchhhHHHHHHHHhcc--------------------------------------------------ccCCCCcCC
Confidence            2211         11111110                                                  011223567


Q ss_pred             hHHHHHHHHccccCCCCCCCH------HHHhcCCCCCCC
Q 013678          393 GDLIDLLQGLLRYDPAERLKA------REALRHPFFTRD  425 (438)
Q Consensus       393 ~~l~~ll~~~L~~dP~~Rpta------~ell~hp~f~~~  425 (438)
                      .++.+||++||+.||++|+++      +|+++||||++-
T Consensus       287 ~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          287 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             HHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             HHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence            899999999999999999985      899999999864

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=2.5e-51  Score=390.55  Aligned_cols=289  Identities=30%  Similarity=0.530  Sum_probs=214.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .++|+++++||+|+||.||+|.+..+++.||+|+++...  ...+.+.+|+.+++.++|+||     +++++++.+++.+
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~~~   78 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENI-----VRLYDVIHTENKL   78 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTB-----CCEEEEECCTTEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCc-----ceEEEEEEECCeE
Confidence            367999999999999999999999999999999987532  234678899999999988877     9999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          169 CIVFEKLGPSLYDFLRKNS----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      |+||||+.++|.+++....    ...+++..++.++.||+.||+|||++||+||||||+|||++.+|             
T Consensus        79 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~-------------  145 (317)
T 2pmi_A           79 TLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRG-------------  145 (317)
T ss_dssp             EEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-------------
T ss_pred             EEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCC-------------
Confidence            9999999889999987542    23589999999999999999999999999999999999997665             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                    .+||+|||++......   .....||+.|+|||++.+. .++.++|||||||++|+|++|..||.+
T Consensus       146 --------------~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  211 (317)
T 2pmi_A          146 --------------QLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPG  211 (317)
T ss_dssp             --------------CEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             --------------CEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                          4677777776554322   2335789999999999874 589999999999999999999999999


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      .+..+.+..+....+.++...+....... .+.     ...+.  .........        ........++.++.+||.
T Consensus       212 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~--~~~~~~~~~--------~~~~~~~~~~~~l~~li~  275 (317)
T 2pmi_A          212 TNDEEQLKLIFDIMGTPNESLWPSVTKLP-KYN-----PNIQQ--RPPRDLRQV--------LQPHTKEPLDGNLMDFLH  275 (317)
T ss_dssp             SSHHHHHHHHHHHHCSCCTTTCGGGGGCT-TCC-----TTCCC--CCCCCSHHH--------HGGGCSSCCCHHHHHHHH
T ss_pred             CChHHHHHHHHHHhCCCChhHhhhhhhhh-hcc-----ccccc--ccchhHHHh--------hcccccccCCHHHHHHHH
Confidence            99999999998888877654433221100 000     00000  000001111        011223356789999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          401 GLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      +||+.||++|||+.|+|+||||++...
T Consensus       276 ~~L~~dP~~Rpt~~e~l~hp~f~~~~~  302 (317)
T 2pmi_A          276 GLLQLNPDMRLSAKQALHHPWFAEYYH  302 (317)
T ss_dssp             HHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred             HHCCCCcccCCCHHHHhCChhhhcccc
Confidence            999999999999999999999987543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=7.3e-52  Score=396.27  Aligned_cols=290  Identities=27%  Similarity=0.460  Sum_probs=222.4

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh---hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ..++|+++++||+|+||.||+|++..+++.||||+++....   ..+.+.+|+.+++.++|+||     +++++++.+++
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~  106 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNI-----IELKSVIHHNH  106 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTB-----CCEEEEEEETT
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCc-----ceEEEEEecCC
Confidence            45789999999999999999999999999999999964332   23556789999999988777     99999999999


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          167 HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       167 ~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      .+||||||+.++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.              
T Consensus       107 ~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~--------------  170 (329)
T 3gbz_A          107 RLHLIFEYAENDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDA--------------  170 (329)
T ss_dssp             EEEEEEECCSEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----------------
T ss_pred             EEEEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCC--------------
Confidence            999999999779999998765  6999999999999999999999999999999999999965441              


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                              +....+||+|||++......   .....||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+
T Consensus       171 --------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  242 (329)
T 3gbz_A          171 --------SETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS  242 (329)
T ss_dssp             ----------CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             --------CccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC
Confidence                    23446889999988754422   23357899999999998754 8999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ..+.+..+....+.++...+.......      .....++...              ...........+++++.+||.+|
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~li~~~  302 (329)
T 3gbz_A          243 EIDQLFKIFEVLGLPDDTTWPGVTALP------DWKQSFPKFR--------------GKTLKRVLGALLDDEGLDLLTAM  302 (329)
T ss_dssp             HHHHHHHHHHHHCCCCTTTSTTGGGST------TCCTTCCCCC--------------CCCHHHHHGGGSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCchhhhhhhhhhh------hhhhhhhhhc--------------cccHhhhcccccCHHHHHHHHHH
Confidence            999988888887766543221111000      0000111100              00011111223577899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      |+.||++|||++|+|+||||++....
T Consensus       303 L~~dP~~R~t~~e~l~hp~f~~~~~~  328 (329)
T 3gbz_A          303 LEMDPVKRISAKNALEHPYFSHNDFD  328 (329)
T ss_dssp             TCSSGGGSCCHHHHHTSGGGSSSCSC
T ss_pred             ccCChhhCCCHHHHhCCcccCCCCCC
Confidence            99999999999999999999986543

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=7.8e-51  Score=396.49  Aligned_cols=264  Identities=25%  Similarity=0.446  Sum_probs=222.2

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      .+.++|++++.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.++|+||     +++++++.+.+.
T Consensus        48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~~~~~~~~~~~  122 (387)
T 1kob_A           48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL-----INLHDAFEDKYE  122 (387)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTB-----CCEEEEEECSSE
T ss_pred             ccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCC-----CeEEEEEEeCCE
Confidence            34578999999999999999999999999999999997543 344578899999999988777     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.+                
T Consensus       123 ~~lv~E~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~----------------  185 (387)
T 1kob_A          123 MVLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK----------------  185 (387)
T ss_dssp             EEEEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST----------------
T ss_pred             EEEEEEcCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecC----------------
Confidence            99999999 999999987543 469999999999999999999999999999999999999642                


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                               ....+||+|||++.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus       186 ---------~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~  256 (387)
T 1kob_A          186 ---------KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL  256 (387)
T ss_dssp             ---------TCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH
T ss_pred             ---------CCCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH
Confidence                     23468999999887654432  3357999999999999999999999999999999999999999988777


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +.+..+......++                                              ......+++++.+||.+||+
T Consensus       257 ~~~~~i~~~~~~~~----------------------------------------------~~~~~~~s~~~~~li~~~L~  290 (387)
T 1kob_A          257 ETLQNVKRCDWEFD----------------------------------------------EDAFSSVSPEAKDFIKNLLQ  290 (387)
T ss_dssp             HHHHHHHHCCCCCC----------------------------------------------SSTTTTSCHHHHHHHHTTSC
T ss_pred             HHHHHHHhCCCCCC----------------------------------------------ccccccCCHHHHHHHHHHcC
Confidence            66665544221111                                              01123457789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          405 YDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      .||++|||+.|+|+||||++.....
T Consensus       291 ~dP~~Rpt~~ell~hp~~~~~~~~~  315 (387)
T 1kob_A          291 KEPRKRLTVHDALEHPWLKGDHSNL  315 (387)
T ss_dssp             SSGGGSCCHHHHHTSTTTSSCCTTC
T ss_pred             CChhHCcCHHHHhhCccccCCcccc
Confidence            9999999999999999999865543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=4e-51  Score=393.88  Aligned_cols=250  Identities=24%  Similarity=0.357  Sum_probs=211.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .++|++++.||+|+||.||+|++..+++.||||++++..    ...+.+.+|..++..+ .|+     +++++++++.+.
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp-----~iv~l~~~~~~~   93 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP-----FLTQLHSCFQTM   93 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCT-----TBCCEEEEEECS
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCC-----EEeeEEEEEEcC
Confidence            478999999999999999999999999999999997532    3345677888888776 444     459999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+|+||||+ |++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|             
T Consensus        94 ~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g-------------  158 (353)
T 2i0e_A           94 DRLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG-------------  158 (353)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS-------------
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCC-------------
Confidence            9999999999 999999998764  699999999999999999999999999999999999997666             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                    .+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.
T Consensus       159 --------------~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~  224 (353)
T 2i0e_A          159 --------------HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE  224 (353)
T ss_dssp             --------------CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             --------------cEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC
Confidence                          46666666665421   1233468999999999999999999999999999999999999999988


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +..+....+......+                                                  +..++.++.+||.+
T Consensus       225 ~~~~~~~~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~  254 (353)
T 2i0e_A          225 DEDELFQSIMEHNVAY--------------------------------------------------PKSMSKEAVAICKG  254 (353)
T ss_dssp             SHHHHHHHHHHCCCCC--------------------------------------------------CTTSCHHHHHHHHH
T ss_pred             CHHHHHHHHHhCCCCC--------------------------------------------------CCCCCHHHHHHHHH
Confidence            7777666654421111                                                  12457789999999


Q ss_pred             ccccCCCCCC-----CHHHHhcCCCCCC
Q 013678          402 LLRYDPAERL-----KAREALRHPFFTR  424 (438)
Q Consensus       402 ~L~~dP~~Rp-----ta~ell~hp~f~~  424 (438)
                      ||+.||++||     +++++++||||+.
T Consensus       255 lL~~dP~~R~~~~~~~~~~i~~h~~f~~  282 (353)
T 2i0e_A          255 LMTKHPGKRLGCGPEGERDIKEHAFFRY  282 (353)
T ss_dssp             HTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred             HhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence            9999999999     4799999999985

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=2.2e-51  Score=398.26  Aligned_cols=282  Identities=27%  Similarity=0.492  Sum_probs=212.5

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+.++|++++.||+|+||.||+|.+..+|+.||||++...   ....+.+.+|+.+++.++|+||     +++++++...
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~~~~~~~~~  100 (367)
T 2fst_X           26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV-----IGLLDVFTPA  100 (367)
T ss_dssp             EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTB-----CCCSEEECSC
T ss_pred             CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCC-----CcEEEEEecC
Confidence            3568999999999999999999999999999999998642   2345677899999999988877     9999988653


Q ss_pred             ------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          166 ------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       166 ------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                            ..+|+|||+++++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++        
T Consensus       101 ~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~--------  169 (367)
T 2fst_X          101 RSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC--------  169 (367)
T ss_dssp             SSGGGCCCCEEEEECCCEECC-----C---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC--------
T ss_pred             CccccCCeEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCC--------
Confidence                  578999999999999998763   599999999999999999999999999999999999997655        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                         .+||+|||++..........+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||
T Consensus       170 -------------------~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf  230 (367)
T 2fst_X          170 -------------------ELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF  230 (367)
T ss_dssp             -------------------CEEECC---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred             -------------------CEEEeeccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                               5777788877765555555789999999999987 57899999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhh-hhhhhcCCCcccCCCCCCChhhHHHHHHhccch-hhhhhccCCchhHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRR-AEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP-NLIMQHVDHSAGDLI  396 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~  396 (438)
                      .+.+..+++..+.+..|.++...+...... ...+....                     ...+ ..........++.+.
T Consensus       231 ~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~  289 (367)
T 2fst_X          231 PGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL---------------------TQMPKMNFANVFIGANPLAV  289 (367)
T ss_dssp             CCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTS---------------------CCCCCCCHHHHTTTCCHHHH
T ss_pred             CCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhcc---------------------CCCCCCCHHHHCCCCCHHHH
Confidence            999999999999999998887664432111 11111100                     0000 001122345678899


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +||.+||++||++|||+.|+|+||||++..
T Consensus       290 dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~  319 (367)
T 2fst_X          290 DLLEKMLVLDSDKRITAAQALAHAYFAQYH  319 (367)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHhCCCCcccCcCHHHHhcChhhhhcc
Confidence            999999999999999999999999998743

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=3.2e-51  Score=396.51  Aligned_cols=260  Identities=27%  Similarity=0.402  Sum_probs=205.4

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      .++|++++.||+|+||.||+|++..+++.||||++.......+.+.+|+.+++.++|+||     +++++++.+.+.+|+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~~~~~l   93 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNI-----VRFKEVILTPTHLAI   93 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTB-----CCEEEEEECSSEEEE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCC-----CcEEEEEeeCCEEEE
Confidence            478999999999999999999999999999999998766666778899999999988877     999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++                  
T Consensus        94 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~------------------  153 (361)
T 3uc3_A           94 IMEYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSP------------------  153 (361)
T ss_dssp             EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSS------------------
T ss_pred             EEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC------------------
Confidence            99999 999999998765  699999999999999999999999999999999999996543                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccC--CCCcccccCCCcchhHHHhCCCCCcc-hhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLGWNYP-CDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                             ...+||+|||++....  ......+||+.|+|||++.+..++.+ +|||||||++|+|++|+.||.+......
T Consensus       154 -------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  226 (361)
T 3uc3_A          154 -------APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD  226 (361)
T ss_dssp             -------SCCEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC
T ss_pred             -------CceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH
Confidence                   2358889999886432  22334689999999999998887655 8999999999999999999976543222


Q ss_pred             HHHH-HHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          327 LAMM-ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       327 ~~~i-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ...+ ......                     ...+                        .....+++++.+||.+||+.
T Consensus       227 ~~~~~~~~~~~---------------------~~~~------------------------~~~~~~s~~~~~li~~~L~~  261 (361)
T 3uc3_A          227 YRKTIQRILSV---------------------KYSI------------------------PDDIRISPECCHLISRIFVA  261 (361)
T ss_dssp             HHHHHHHHHTT---------------------CCCC------------------------CTTSCCCHHHHHHHHHHSCS
T ss_pred             HHHHHHHHhcC---------------------CCCC------------------------CCcCCCCHHHHHHHHHHccC
Confidence            2111 111100                     0000                        01124577899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      ||++|||+.|+++||||.+...
T Consensus       262 dP~~Rps~~ell~hp~f~~~~~  283 (361)
T 3uc3_A          262 DPATRISIPEIKTHSWFLKNLP  283 (361)
T ss_dssp             CTTTSCCHHHHHTSHHHHTTCC
T ss_pred             ChhHCcCHHHHHhCcchhcCCc
Confidence            9999999999999999976543

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.1e-50  Score=390.09  Aligned_cols=251  Identities=22%  Similarity=0.381  Sum_probs=205.4

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .++|++++.||+|+||.||+|+++.+++.||||++++..    ...+.+.+|+.++..+ +|++|     +++++++.+.
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~i-----v~l~~~~~~~   82 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL-----VGLHSCFQTE   82 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTB-----CCEEEEEECS
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCcc-----CeEEEEEEeC
Confidence            368999999999999999999999999999999997532    3345677899999887 67666     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|.            
T Consensus        83 ~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~------------  148 (345)
T 3a8x_A           83 SRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH------------  148 (345)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSC------------
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCC------------
Confidence            9999999999 999999998764  7999999999999999999999999999999999999977664            


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                     +||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||...
T Consensus       149 ---------------~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  213 (345)
T 3a8x_A          149 ---------------IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV  213 (345)
T ss_dssp             ---------------EEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTT
T ss_pred             ---------------EEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCc
Confidence                           5555555554321   1233458999999999999999999999999999999999999999653


Q ss_pred             ChH---------HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCch
Q 013678          322 ENL---------EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  392 (438)
Q Consensus       322 ~~~---------~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (438)
                      ...         .....+...                                                  ....+..++
T Consensus       214 ~~~~~~~~~~~~~~~~~i~~~--------------------------------------------------~~~~p~~~s  243 (345)
T 3a8x_A          214 GSSDNPDQNTEDYLFQVILEK--------------------------------------------------QIRIPRSLS  243 (345)
T ss_dssp             TC-------CHHHHHHHHHHC--------------------------------------------------CCCCCTTSC
T ss_pred             ccccccccccHHHHHHHHHcC--------------------------------------------------CCCCCCCCC
Confidence            211         111111110                                                  011223567


Q ss_pred             hHHHHHHHHccccCCCCCCCH------HHHhcCCCCCCC
Q 013678          393 GDLIDLLQGLLRYDPAERLKA------REALRHPFFTRD  425 (438)
Q Consensus       393 ~~l~~ll~~~L~~dP~~Rpta------~ell~hp~f~~~  425 (438)
                      .++.+||.+||+.||++||++      .|+++||||++.
T Consensus       244 ~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          244 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  282 (345)
T ss_dssp             HHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence            789999999999999999995      899999999863

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=8.1e-51  Score=395.41  Aligned_cols=303  Identities=27%  Similarity=0.447  Sum_probs=226.7

Q ss_pred             CCceeeecCC---ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCC
Q 013678           79 DGHYVFAIGE---NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGG  152 (438)
Q Consensus        79 ~~~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~  152 (438)
                      .++|.+.+++   .+.++|++++.||+|+||.||+|.+..+++.||||++...   ....+.+.+|+.+++.++|+||  
T Consensus         9 ~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpni--   86 (371)
T 2xrw_A            9 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI--   86 (371)
T ss_dssp             GGEEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTB--
T ss_pred             CcceEeecCCcccchhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCc--
Confidence            4567777777   4568999999999999999999999999999999999752   2345667899999999988877  


Q ss_pred             cceEEecceeccCC------eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEE
Q 013678          153 TRCVQIRNWFDYRN------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL  226 (438)
Q Consensus       153 ~~iv~~~~~~~~~~------~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  226 (438)
                         +++++++...+      .+|+||||+.++|.+++..    .+++..+..++.||+.||+|||++||+||||||+|||
T Consensus        87 ---v~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl  159 (371)
T 2xrw_A           87 ---IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV  159 (371)
T ss_dssp             ---CCEEEEECSCCSTTTCCEEEEEEECCSEEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred             ---cceEEeeccccccccccceEEEEEcCCCCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEE
Confidence               99999887654      8999999998899998863    5899999999999999999999999999999999999


Q ss_pred             EecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHH
Q 013678          227 LVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSV  304 (438)
Q Consensus       227 i~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  304 (438)
                      ++.++                           .+||+|||++......  .....||+.|+|||++.+..++.++|||||
T Consensus       160 ~~~~~---------------------------~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  212 (371)
T 2xrw_A          160 VKSDC---------------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV  212 (371)
T ss_dssp             ECTTS---------------------------CEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHH
T ss_pred             EcCCC---------------------------CEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHH
Confidence            97655                           5677777777654332  233589999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhh
Q 013678          305 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  384 (438)
Q Consensus       305 G~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (438)
                      ||++|+|++|..||.+.+..+.+..+.+..+.++..+..........+..........       ...........+ ..
T Consensus       213 G~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~  284 (371)
T 2xrw_A          213 GCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGY-------SFEKLFPDVLFP-AD  284 (371)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCC-------CHHHHSCGGGSC-CS
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCcccccc-------chhhhcccccCc-cc
Confidence            9999999999999999999999988888888877766544433333332221110000       000000000000 00


Q ss_pred             hhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       385 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .......+.++.+||.+||+.||++|||++|+|+||||+..
T Consensus       285 ~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          285 SEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             SHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             ccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence            00011225689999999999999999999999999999864

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=1.5e-50  Score=393.48  Aligned_cols=297  Identities=27%  Similarity=0.468  Sum_probs=235.6

Q ss_pred             CCCCCCCCceeeecCCc---cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHH
Q 013678           73 WRPDDKDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLA  146 (438)
Q Consensus        73 ~~~~~~~~~~~~~~~~~---~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~  146 (438)
                      .......++|...+...   +.++|++.+.||+|+||.||+|.+..+|+.||||++...   ....+.+.+|+.+++.++
T Consensus        20 m~~~~~~g~~~~~~~~~~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~   99 (371)
T 4exu_A           20 MSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ   99 (371)
T ss_dssp             -CCSSCTTEEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCC
T ss_pred             eeeeccccceeeeeccceecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcC
Confidence            33445667787776653   679999999999999999999999999999999999753   334567789999999998


Q ss_pred             hcCCCCcceEEecceeccCCeE------EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Q 013678          147 RHDIGGTRCVQIRNWFDYRNHI------CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL  220 (438)
Q Consensus       147 ~~~i~~~~iv~~~~~~~~~~~~------~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  220 (438)
                      |+||     +++++++...+..      |+||||++++|.+++..    .+++..++.++.||+.||+|||++||+||||
T Consensus       100 h~ni-----v~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Di  170 (371)
T 4exu_A          100 HENV-----IGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDL  170 (371)
T ss_dssp             CTTB-----CCCSEEECSCSSSTTCCCCEEEEECCCEEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCc-----hhhhhheeccCCcccceeEEEEEccccccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCc
Confidence            8877     9999999876654      99999998899888742    5999999999999999999999999999999


Q ss_pred             CCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC-CCCCcch
Q 013678          221 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPC  299 (438)
Q Consensus       221 kp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~  299 (438)
                      ||+|||++.++                           .+||+|||++...........||+.|+|||++.+ ..++.++
T Consensus       171 kp~NIll~~~~---------------------------~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~  223 (371)
T 4exu_A          171 KPGNLAVNEDC---------------------------ELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTV  223 (371)
T ss_dssp             CGGGEEECTTC---------------------------CEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCCTTH
T ss_pred             CHHHeEECCCC---------------------------CEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCCcHH
Confidence            99999996654                           5788888888776666666789999999999987 6789999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhcc
Q 013678          300 DLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR  379 (438)
Q Consensus       300 DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (438)
                      |||||||++|+|++|..||.+.+..+.+..+....+.++..+...........+.                    .....
T Consensus       224 DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~  283 (371)
T 4exu_A          224 DIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYI--------------------QSLPQ  283 (371)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHH--------------------HHSCC
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhh--------------------hccCC
Confidence            9999999999999999999999999999999999998887665432211110000                    00000


Q ss_pred             -chhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          380 -LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       380 -~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                       ...........+++++.+||.+||+.||++|||+.|+|+||||+..
T Consensus       284 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  330 (371)
T 4exu_A          284 TPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  330 (371)
T ss_dssp             CCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             CcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence             0011122334568899999999999999999999999999999864

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.7e-52  Score=399.27  Aligned_cols=256  Identities=24%  Similarity=0.391  Sum_probs=211.4

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      ....++|++.+.||+|+||.||+|.+..+++.||||++....    .....+.+|+.+++.++|+||     +++++++.
T Consensus         5 ~~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~l~~~~~   79 (336)
T 3h4j_B            5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHI-----IKLYDVIT   79 (336)
T ss_dssp             CSEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTB-----CCEEEEEE
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCC-----CeEEEEEE
Confidence            445578999999999999999999999999999999997532    223568899999999988777     99999999


Q ss_pred             cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          164 YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       164 ~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      +.+.+++||||++|+|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++            
T Consensus        80 ~~~~~~lv~E~~~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~------------  145 (336)
T 3h4j_B           80 TPTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNL------------  145 (336)
T ss_dssp             CSSEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTC------------
T ss_pred             eCCEEEEEEECCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCC------------
Confidence            999999999999999999998765  799999999999999999999999999999999999997655            


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCC-CcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                     .+||+|||++......  ....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+
T Consensus       146 ---------------~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~  210 (336)
T 3h4j_B          146 ---------------NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD  210 (336)
T ss_dssp             ---------------CEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBC
T ss_pred             ---------------CEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCC
Confidence                           5777777777654332  234589999999999988775 7899999999999999999999976


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      .........+                                                  .......+..+++++.+||.
T Consensus       211 ~~~~~~~~~i--------------------------------------------------~~~~~~~p~~~s~~~~~li~  240 (336)
T 3h4j_B          211 EFIPNLFKKV--------------------------------------------------NSCVYVMPDFLSPGAQSLIR  240 (336)
T ss_dssp             SSSTTCBCCC--------------------------------------------------CSSCCCCCTTSCHHHHHHHH
T ss_pred             ccHHHHHHHH--------------------------------------------------HcCCCCCcccCCHHHHHHHH
Confidence            4321110000                                                  00001123346788999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          401 GLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      +||+.||.+|||++|+++||||+....
T Consensus       241 ~~L~~dP~~Rpt~~eil~hp~~~~~~~  267 (336)
T 3h4j_B          241 RMIVADPMQRITIQEIRRDPWFNVNLP  267 (336)
T ss_dssp             TTSCSSGGGSCCHHHHTTCHHHHTTCC
T ss_pred             HHcCCChhHCcCHHHHHhChhhccCCc
Confidence            999999999999999999999987643

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.3e-50  Score=384.51  Aligned_cols=261  Identities=25%  Similarity=0.325  Sum_probs=208.1

Q ss_pred             CCceeeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHH-HhcCCCCcc
Q 013678           79 DGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL-ARHDIGGTR  154 (438)
Q Consensus        79 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l-~~~~i~~~~  154 (438)
                      .++++...++.+.++|+++++||+|+||+||+|++..+++.||||++...   .........|+..+..+ .|+|+    
T Consensus        44 ~~~~p~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~i----  119 (311)
T 3p1a_A           44 PGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCC----  119 (311)
T ss_dssp             TTCCTTSSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTB----
T ss_pred             CCCCCCCccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcE----
Confidence            45566667788889999999999999999999999999999999998642   23334455566666655 56655    


Q ss_pred             eEEecceeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 013678          155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  234 (438)
Q Consensus       155 iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  234 (438)
                       +++++++.+++.+|+||||++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++   
T Consensus       120 -v~l~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~---  194 (311)
T 3p1a_A          120 -VRLEQAWEEGGILYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRG---  194 (311)
T ss_dssp             -CCEEEEEEETTEEEEEEECCCCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGG---
T ss_pred             -EEEEEEEEeCCEEEEEEeccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC---
Confidence             99999999999999999999999999988764 4699999999999999999999999999999999999997766   


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHH
Q 013678          235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC  312 (438)
Q Consensus       235 l~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell  312 (438)
                                              .+||+|||++.......  ....||+.|+|||++.+ .++.++|||||||++|||+
T Consensus       195 ------------------------~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~  249 (311)
T 3p1a_A          195 ------------------------RCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVA  249 (311)
T ss_dssp             ------------------------CEEECCCTTCEECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHH
T ss_pred             ------------------------CEEEccceeeeecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHH
Confidence                                    46777777665543322  23468999999999876 7899999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCch
Q 013678          313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  392 (438)
Q Consensus       313 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (438)
                      +|..||.+.....   .+..  +..+.                                              .....++
T Consensus       250 ~g~~~~~~~~~~~---~~~~--~~~~~----------------------------------------------~~~~~~~  278 (311)
T 3p1a_A          250 CNMELPHGGEGWQ---QLRQ--GYLPP----------------------------------------------EFTAGLS  278 (311)
T ss_dssp             HTCCCCSSHHHHH---HHTT--TCCCH----------------------------------------------HHHTTSC
T ss_pred             hCCCCCCCccHHH---HHhc--cCCCc----------------------------------------------ccccCCC
Confidence            9977765432211   1100  11111                                              1123457


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       393 ~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      +++.+||.+||+.||++|||+.|+|+||||++
T Consensus       279 ~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          279 SELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            79999999999999999999999999999986

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=4.2e-51  Score=400.72  Aligned_cols=255  Identities=23%  Similarity=0.392  Sum_probs=214.3

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ..++|++++.||+|+||.||+|+++.+++.||+|++++..    ...+.+.+|+.++..++|++|     +++++++.+.
T Consensus        67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~I-----v~l~~~~~~~  141 (410)
T 3v8s_A           67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV-----VQLFYAFQDD  141 (410)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTB-----CCEEEEEECS
T ss_pred             CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEEEC
Confidence            3478999999999999999999999999999999997532    223457789999999988877     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+||||||| ||+|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.+|             
T Consensus       142 ~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g-------------  205 (410)
T 3v8s_A          142 RYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG-------------  205 (410)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-------------
T ss_pred             CEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCC-------------
Confidence            9999999999 99999999764   599999999999999999999999999999999999997665             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCC----CCcchhHHHHHHHHHHHHhCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~il~elltg~~  316 (438)
                                    .+||+|||++.......    ...+||+.|+|||++.+..    ++.++|||||||++|||++|..
T Consensus       206 --------------~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~  271 (410)
T 3v8s_A          206 --------------HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT  271 (410)
T ss_dssp             --------------CEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCC
Confidence                          56777777765543322    2468999999999998765    7899999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||.+.+.......+......                      ..+                        .....++.+++
T Consensus       272 Pf~~~~~~~~~~~i~~~~~~----------------------~~~------------------------p~~~~~s~~~~  305 (410)
T 3v8s_A          272 PFYADSLVGTYSKIMNHKNS----------------------LTF------------------------PDDNDISKEAK  305 (410)
T ss_dssp             TTCCSSHHHHHHHHHTHHHH----------------------CCC------------------------CTTCCCCHHHH
T ss_pred             CCCCCChhhHHHHHHhcccc----------------------ccC------------------------CCcccccHHHH
Confidence            99988877776666432100                      000                        11134678999


Q ss_pred             HHHHHccccCCCC--CCCHHHHhcCCCCCCC
Q 013678          397 DLLQGLLRYDPAE--RLKAREALRHPFFTRD  425 (438)
Q Consensus       397 ~ll~~~L~~dP~~--Rpta~ell~hp~f~~~  425 (438)
                      +||.+||+.+|.+  |++++||++||||++.
T Consensus       306 ~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          306 NLICAFLTDREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             HHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             HHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence            9999999999988  9999999999999874

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=3.2e-51  Score=401.72  Aligned_cols=261  Identities=25%  Similarity=0.442  Sum_probs=200.6

Q ss_pred             cCCceEEE-eeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceecc---
Q 013678           90 LTPRCKIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDY---  164 (438)
Q Consensus        90 ~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~---  164 (438)
                      +.++|.+. +.||+|+||.||+|.+..+++.||||+++..    ....+|+.++.++ .|+||     +++++++..   
T Consensus        59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~hp~i-----v~l~~~~~~~~~  129 (400)
T 1nxk_A           59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHI-----VRIVDVYENLYA  129 (400)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTB-----CCEEEEEEEEET
T ss_pred             ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCCCCc-----ceEeEEEeeccc
Confidence            34567666 7899999999999999999999999999643    3466788887555 55555     999888765   


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          165 -RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       165 -~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                       .+++||||||| +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++..+           
T Consensus       130 ~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~-----------  198 (400)
T 1nxk_A          130 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR-----------  198 (400)
T ss_dssp             TEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS-----------
T ss_pred             CCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCC-----------
Confidence             56899999999 89999999876555799999999999999999999999999999999999997532           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                   .+..+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus       199 -------------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  265 (400)
T 1nxk_A          199 -------------PNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS  265 (400)
T ss_dssp             -------------TTCCEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             -------------CCccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCC
Confidence                         2346888888888764432  2346889999999999988999999999999999999999999976


Q ss_pred             CChHH----HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          321 HENLE----HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       321 ~~~~~----~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      .....    ....+......+                        +                      ......++.++.
T Consensus       266 ~~~~~~~~~~~~~i~~~~~~~------------------------~----------------------~~~~~~~s~~~~  299 (400)
T 1nxk_A          266 NHGLAISPGMKTRIRMGQYEF------------------------P----------------------NPEWSEVSEEVK  299 (400)
T ss_dssp             CTTCSSCCSHHHHHHHTCCCC------------------------C----------------------TTTTTTSCHHHH
T ss_pred             CccccccHHHHHHHHcCcccC------------------------C----------------------CcccccCCHHHH
Confidence            54321    111111100000                        0                      011235678999


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      +||.+||+.||++|||+.|+++||||.+....+
T Consensus       300 ~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~~~  332 (400)
T 1nxk_A          300 MLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP  332 (400)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHHHSHHHHTTTTSC
T ss_pred             HHHHHHCCCChhHCcCHHHHhcCccccCCCCCC
Confidence            999999999999999999999999998765443

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=4.5e-51  Score=389.63  Aligned_cols=257  Identities=22%  Similarity=0.372  Sum_probs=208.0

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      +.++|++.+.||+|+||.||+|++..+++.||||++....  ...+.+.+|+.+++.++|+||     +++++++.+++.
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~~~~~~~~~~~   79 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV-----VKFYGHRREGNI   79 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTB-----CCEEEEEECSSE
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCC-----CeEEEEEecCCe
Confidence            4578999999999999999999999999999999986432  234668899999999988877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      .|+||||| +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++               
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~---------------  142 (323)
T 3tki_A           80 QYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD---------------  142 (323)
T ss_dssp             EEEEEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC---------------
T ss_pred             EEEEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCC---------------
Confidence            99999999 889999987654  699999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCC-CcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                  .+||+|||++......     .....||+.|+|||++.+..+ +.++|||||||++|+|++|..||..
T Consensus       143 ------------~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  210 (323)
T 3tki_A          143 ------------NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ  210 (323)
T ss_dssp             ------------CEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred             ------------CEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCC
Confidence                        5677777777543211     224579999999999998775 7899999999999999999999976


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      .+..............                                               .......++..+.+||.
T Consensus       211 ~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~li~  243 (323)
T 3tki_A          211 PSDSCQEYSDWKEKKT-----------------------------------------------YLNPWKKIDSAPLALLH  243 (323)
T ss_dssp             SCTTSHHHHHHHTTCT-----------------------------------------------TSTTGGGSCHHHHHHHH
T ss_pred             CchHHHHHHHHhcccc-----------------------------------------------cCCccccCCHHHHHHHH
Confidence            5543221111100000                                               00111345678999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          401 GLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      +||+.||++|||+.|+++||||++...
T Consensus       244 ~~L~~dP~~R~t~~eil~h~~~~~~~~  270 (323)
T 3tki_A          244 KILVENPSARITIPDIKKDRWYNKPLK  270 (323)
T ss_dssp             HHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             HHccCChhhCcCHHHHhhChhhccccc
Confidence            999999999999999999999987543

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=5.5e-50  Score=380.07  Aligned_cols=283  Identities=30%  Similarity=0.541  Sum_probs=222.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      .++|+++++||+|+||.||+|++..+++.||||++....   ...+.+.+|+.+++.++|+||     +++++++.+.+.
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~   76 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNL-----VNLLEVFRRKRR   76 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEEETTE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCc-----cchhheeecCCe
Confidence            468999999999999999999999999999999986432   235667889999999988877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      .++||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+||+++.++               
T Consensus        77 ~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~---------------  139 (311)
T 4agu_A           77 LHLVFEYCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHS---------------  139 (311)
T ss_dssp             EEEEEECCSEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS---------------
T ss_pred             EEEEEEeCCCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCC---------------
Confidence            99999999 778888876554  699999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                  .++|+|||++......   .....||..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+
T Consensus       140 ------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  207 (311)
T 4agu_A          140 ------------VIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS  207 (311)
T ss_dssp             ------------CEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ------------CEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence                        5777777777654322   223578999999999987 568999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ..+....+.+..+..+..........  .++.. .....+...                .........++.++.+||.+|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~----------------~~~~~~~~~~~~~~~~li~~~  268 (311)
T 4agu_A          208 DVDQLYLIRKTLGDLIPRHQQVFSTN--QYFSG-VKIPDPEDM----------------EPLELKFPNISYPALGLLKGC  268 (311)
T ss_dssp             HHHHHHHHHHHHCSCCHHHHHHHHTC--GGGTT-CCCCCCSSC----------------CCHHHHCTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccccccccccccc--ccccc-CcCCCcccc----------------chhhhhcccccHHHHHHHHHH
Confidence            99999999888888776543322111  11110 011111000                001112245678899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      |+.||++|||++|+|+||||++..
T Consensus       269 L~~dP~~Rpt~~ell~hp~f~~~~  292 (311)
T 4agu_A          269 LHMDPTERLTCEQLLHHPYFENIR  292 (311)
T ss_dssp             CCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             ccCChhhcCCHHHHhcChHHHhcc
Confidence            999999999999999999999754

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=1.3e-50  Score=409.51  Aligned_cols=272  Identities=26%  Similarity=0.446  Sum_probs=227.8

Q ss_pred             CCCceeeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--------------hhHHHHHHHHHHHH
Q 013678           78 KDGHYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--------------KYREAAMIEIDVLQ  143 (438)
Q Consensus        78 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~E~~~l~  143 (438)
                      ..+.|.......+.++|+++++||+|+||+||+|.+..+++.||||++....              ...+.+.+|+.+++
T Consensus        22 ~~~~~~~~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~  101 (504)
T 3q5i_A           22 NPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK  101 (504)
T ss_dssp             CGGGGCCEECSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHH
T ss_pred             chhheeeccCCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHH
Confidence            3455666677788899999999999999999999999999999999987532              23467889999999


Q ss_pred             HHHhcCCCCcceEEecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 013678          144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKP  222 (438)
Q Consensus       144 ~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  222 (438)
                      .++|+||     +++++++.+.+.+||||||| +++|.+++....  .+++..++.++.||+.||+|||++||+||||||
T Consensus       102 ~l~hpni-----v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp  174 (504)
T 3q5i_A          102 SLDHPNI-----IKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKHNIVHRDIKP  174 (504)
T ss_dssp             TCCCTTB-----CCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             hCCCCCC-----CeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcH
Confidence            9988877     99999999999999999999 999999998764  799999999999999999999999999999999


Q ss_pred             CcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchh
Q 013678          223 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCD  300 (438)
Q Consensus       223 ~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  300 (438)
                      +|||++.++                        ....+||+|||++......  ....+||+.|+|||++.+ .++.++|
T Consensus       175 ~Nil~~~~~------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~D  229 (504)
T 3q5i_A          175 ENILLENKN------------------------SLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCD  229 (504)
T ss_dssp             GGEEESSTT------------------------CCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHH
T ss_pred             HHEEEecCC------------------------CCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHH
Confidence            999997654                        2236899999998765443  234689999999999874 6899999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccc
Q 013678          301 LWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL  380 (438)
Q Consensus       301 iwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (438)
                      ||||||++|+|++|..||.+.+..+.+..+......++.                                         
T Consensus       230 iwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-----------------------------------------  268 (504)
T 3q5i_A          230 VWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDF-----------------------------------------  268 (504)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCH-----------------------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc-----------------------------------------
Confidence            999999999999999999998887777766553222221                                         


Q ss_pred             hhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       381 ~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                           .....+++++.+||.+||++||.+|||+.|+|+||||++...
T Consensus       269 -----~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~  310 (504)
T 3q5i_A          269 -----NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN  310 (504)
T ss_dssp             -----HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred             -----cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchh
Confidence                 112346779999999999999999999999999999986543

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=3.8e-50  Score=376.10  Aligned_cols=265  Identities=24%  Similarity=0.396  Sum_probs=224.0

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||+|++....   ...+.+.+|+.+++.++|+|+     +++++++.+
T Consensus         2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~   76 (284)
T 3kk8_A            2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI-----VRLHDSIQE   76 (284)
T ss_dssp             CTTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEEC
T ss_pred             chhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCc-----CeEEEEEEc
Confidence            346789999999999999999999999999999999997533   344667889999999988777     999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      .+..++||||+ +++|.+.+....  .+++..+..++.||+.||.|||++||+||||||+||+++.++            
T Consensus        77 ~~~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~------------  142 (284)
T 3kk8_A           77 ESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA------------  142 (284)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSS------------
T ss_pred             CCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCC------------
Confidence            99999999999 899999988764  699999999999999999999999999999999999997654            


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                  ....+||+|||++.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus       143 ------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~  210 (284)
T 3kk8_A          143 ------------KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE  210 (284)
T ss_dssp             ------------TTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ------------CCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCC
Confidence                        23458999999887654433  2357899999999999999999999999999999999999999988


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +.......+.......|.                                              .....+++++.+||.+
T Consensus       211 ~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~  244 (284)
T 3kk8_A          211 DQHRLYAQIKAGAYDYPS----------------------------------------------PEWDTVTPEAKSLIDS  244 (284)
T ss_dssp             SHHHHHHHHHHTCCCCCT----------------------------------------------TTTTTSCHHHHHHHHH
T ss_pred             chhHHHHHHHhccccCCc----------------------------------------------hhhcccCHHHHHHHHH
Confidence            777666655443222211                                              1113456789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          402 LLRYDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      ||+.||++|||+.|+|+||||++..+..
T Consensus       245 ~l~~dp~~Rps~~~~l~h~~~~~~~~~~  272 (284)
T 3kk8_A          245 MLTVNPKKRITADQALKVPWICNRERVA  272 (284)
T ss_dssp             HSCSSTTTSCCHHHHTTSHHHHSCCCGG
T ss_pred             HcccChhhCCCHHHHhcCccccCChhHH
Confidence            9999999999999999999998765443

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.3e-50  Score=390.47  Aligned_cols=264  Identities=27%  Similarity=0.437  Sum_probs=205.0

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      .+.+.++|++.+.||+|+||.||+|++..+++.||||+++... ..+.+.+|+.+++.+.|+||     +++++++.+.+
T Consensus        48 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~  121 (349)
T 2w4o_A           48 RDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNI-----IKLKEIFETPT  121 (349)
T ss_dssp             CSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTB-----CCEEEEEECSS
T ss_pred             cccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCC-----cceeeeEecCC
Confidence            3567789999999999999999999999999999999997543 34567889999999988877     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      .+++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++..+              
T Consensus       122 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~--------------  185 (349)
T 2w4o_A          122 EISLVLELVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPA--------------  185 (349)
T ss_dssp             EEEEEECCCCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSS--------------
T ss_pred             eEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCC--------------
Confidence            999999999 899999997654  699999999999999999999999999999999999996421              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                .+..+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.....
T Consensus       186 ----------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  255 (349)
T 2w4o_A          186 ----------PDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG  255 (349)
T ss_dssp             ----------TTCCEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC
T ss_pred             ----------CCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc
Confidence                      2446888899888765433  2345799999999999999999999999999999999999999977655


Q ss_pred             HH-HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          324 LE-HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       324 ~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      .. ....+.......+                                              ......++.++.+||.+|
T Consensus       256 ~~~~~~~i~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~~  289 (349)
T 2w4o_A          256 DQFMFRRILNCEYYFI----------------------------------------------SPWWDEVSLNAKDLVRKL  289 (349)
T ss_dssp             HHHHHHHHHTTCCCCC----------------------------------------------TTTTTTSCHHHHHHHHTT
T ss_pred             cHHHHHHHHhCCCccC----------------------------------------------CchhhhCCHHHHHHHHHH
Confidence            44 2222222111100                                              011234577899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      |+.||++|||+.|+|+||||++....
T Consensus       290 L~~dP~~Rpt~~e~l~hp~~~~~~~~  315 (349)
T 2w4o_A          290 IVLDPKKRLTTFQALQHPWVTGKAAN  315 (349)
T ss_dssp             SCSSGGGSCCHHHHHHSTTTTSTTCC
T ss_pred             ccCChhhCcCHHHHhcCcccCCCccc
Confidence            99999999999999999999976543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=3.2e-50  Score=383.55  Aligned_cols=264  Identities=27%  Similarity=0.457  Sum_probs=223.0

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh-------hHHHHHHHHHHHHHHHhcCCCCcceEEec
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLARHDIGGTRCVQIR  159 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~i~~~~iv~~~  159 (438)
                      ...+.++|++.+.||+|+||.||+|.+..+++.||+|++.....       ..+.+.+|+.+++.+.|+|+     ++++
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~   81 (321)
T 2a2a_A            7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV-----ITLH   81 (321)
T ss_dssp             CSCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTB-----CCEE
T ss_pred             chhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCc-----ceEE
Confidence            34567899999999999999999999999999999999975321       35678899999999988877     9999


Q ss_pred             ceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCc
Q 013678          160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  238 (438)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df  238 (438)
                      +++.+.+.+++||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.      
T Consensus        82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~------  153 (321)
T 2a2a_A           82 DVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI------  153 (321)
T ss_dssp             EEEECSSEEEEEECCCCSCBHHHHHHTCS--CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTS------
T ss_pred             EEEecCCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCC------
Confidence            9999999999999999 999999998654  7999999999999999999999999999999999999976541      


Q ss_pred             cccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCC
Q 013678          239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       239 ~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~  316 (438)
                                       ....++|+|||++.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus       154 -----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  216 (321)
T 2a2a_A          154 -----------------PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS  216 (321)
T ss_dssp             -----------------SSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCC
T ss_pred             -----------------CcCCEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCC
Confidence                             12258888888887654332  33579999999999999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||.+.+..+.+..+.......+..                                              .....+..+.
T Consensus       217 pf~~~~~~~~~~~i~~~~~~~~~~----------------------------------------------~~~~~~~~~~  250 (321)
T 2a2a_A          217 PFLGDTKQETLANITSVSYDFDEE----------------------------------------------FFSHTSELAK  250 (321)
T ss_dssp             SSCCSSHHHHHHHHHTTCCCCCHH----------------------------------------------HHTTCCHHHH
T ss_pred             CCCCCCHHHHHHHHHhcccccChh----------------------------------------------hhcccCHHHH
Confidence            999887777666554433222211                                              1234567899


Q ss_pred             HHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          397 DLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +||.+||+.||++|||+.|+++||||+...
T Consensus       251 ~li~~~l~~dp~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          251 DFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             HHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred             HHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence            999999999999999999999999998643

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=4.6e-50  Score=389.19  Aligned_cols=289  Identities=29%  Similarity=0.520  Sum_probs=229.0

Q ss_pred             eeecCCcc--CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEe
Q 013678           83 VFAIGENL--TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQI  158 (438)
Q Consensus        83 ~~~~~~~~--~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~  158 (438)
                      .+..|+.+  .++|++++.||+|+||.||+|.+..+++.||||++...  ....+.+.+|+.++..++|+||     +++
T Consensus        16 ~~~~g~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~   90 (364)
T 3qyz_A           16 EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI-----IGI   90 (364)
T ss_dssp             CBCC-CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTB-----CCC
T ss_pred             EEEccEeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCC-----ccc
Confidence            34445544  48999999999999999999999999999999999743  2344678899999999988877     999


Q ss_pred             cceeccC-----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccc
Q 013678          159 RNWFDYR-----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  233 (438)
Q Consensus       159 ~~~~~~~-----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~  233 (438)
                      ++++...     ...|+||||++++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++  
T Consensus        91 ~~~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~--  165 (364)
T 3qyz_A           91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--  165 (364)
T ss_dssp             CEEECCSSTTTCCCEEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC--
T ss_pred             eeEEecCCccccceEEEEEcccCcCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCC--
Confidence            9988654     479999999988999999865   599999999999999999999999999999999999997655  


Q ss_pred             ccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC------CcccccCCCcchhHHHhCC-CCCcchhHHHHHH
Q 013678          234 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGC  306 (438)
Q Consensus       234 kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~  306 (438)
                                               .+||+|||++......      ....+||+.|+|||++.+. .++.++|||||||
T Consensus       166 -------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~  220 (364)
T 3qyz_A          166 -------------------------DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC  220 (364)
T ss_dssp             -------------------------CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHH
T ss_pred             -------------------------CEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHH
Confidence                                     4677777776544322      1335899999999987654 4899999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhh-hhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhh
Q 013678          307 ILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRR-AEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  385 (438)
Q Consensus       307 il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (438)
                      ++|+|++|..||.+.+..+.+..+...++.++...+...... ...+....     +.               .......
T Consensus       221 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---------------~~~~~~~  280 (364)
T 3qyz_A          221 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL-----PH---------------KNKVPWN  280 (364)
T ss_dssp             HHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTS-----CC---------------CCCCCHH
T ss_pred             HHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhc-----CC---------------ccCCCHH
Confidence            999999999999999999999999999998887654332110 00110000     00               0000011


Q ss_pred             hccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       386 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      .....++.++.+||.+||++||++|||+.|+|+||||++..
T Consensus       281 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  321 (364)
T 3qyz_A          281 RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY  321 (364)
T ss_dssp             HHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             HhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhcc
Confidence            22345678999999999999999999999999999999864

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=1.4e-50  Score=399.94  Aligned_cols=259  Identities=25%  Similarity=0.393  Sum_probs=214.3

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      ...++|+++++||+|+||+||+|+++.+++.||+|++++...    ....+.+|+.++..++|++|     +++++++.+
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~I-----v~l~~~~~~  145 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWI-----TTLHYAFQD  145 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTB-----CCEEEEEEC
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCE-----EEEEEEEee
Confidence            345789999999999999999999999999999999975322    22347889999999888777     999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      .+.+||||||| +|+|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|            
T Consensus       146 ~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g------------  212 (437)
T 4aw2_A          146 DNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG------------  212 (437)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS------------
T ss_pred             CCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCC------------
Confidence            99999999999 999999998743 4799999999999999999999999999999999999997666            


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHh-----CCCCCcchhHHHHHHHHHHHHhC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg  314 (438)
                                     .+||+|||++.......    ...+||+.|+|||++.     ...++.++|||||||++|||++|
T Consensus       213 ---------------~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG  277 (437)
T 4aw2_A          213 ---------------HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG  277 (437)
T ss_dssp             ---------------CEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHS
T ss_pred             ---------------CEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhC
Confidence                           46667777665433221    2358999999999997     45689999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      ..||.+.+..+....+.....                      ...+|.                       ....++++
T Consensus       278 ~~Pf~~~~~~~~~~~i~~~~~----------------------~~~~p~-----------------------~~~~~s~~  312 (437)
T 4aw2_A          278 ETPFYAESLVETYGKIMNHKE----------------------RFQFPT-----------------------QVTDVSEN  312 (437)
T ss_dssp             SCTTCCSSHHHHHHHHHTHHH----------------------HCCCCS-----------------------SCCCSCHH
T ss_pred             CCCCCCCChhHHHHhhhhccc----------------------cccCCc-----------------------ccccCCHH
Confidence            999999887777766643210                      001111                       11346789


Q ss_pred             HHHHHHHccccCCCC--CCCHHHHhcCCCCCCC
Q 013678          395 LIDLLQGLLRYDPAE--RLKAREALRHPFFTRD  425 (438)
Q Consensus       395 l~~ll~~~L~~dP~~--Rpta~ell~hp~f~~~  425 (438)
                      +.+||++||..+|++  |++++|+++||||++.
T Consensus       313 ~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i  345 (437)
T 4aw2_A          313 AKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI  345 (437)
T ss_dssp             HHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred             HHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence            999999999999988  9999999999999864

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=7.1e-51  Score=390.92  Aligned_cols=258  Identities=25%  Similarity=0.419  Sum_probs=211.1

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccCCe
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      .+.++|++.+.||+|+||.||+|.++.+++.||||++.+...   ...+|+.++.++ .|+||     +++++++.+++.
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~i-----v~~~~~~~~~~~   90 (342)
T 2qr7_A           19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNI-----ITLKDVYDDGKY   90 (342)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTB-----CCEEEEEECSSE
T ss_pred             CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCc-----CeEEEEEEcCCE
Confidence            456889999999999999999999999999999999975432   345688888888 57666     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|+||||| |++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||+...+               
T Consensus        91 ~~lv~E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~---------------  153 (342)
T 2qr7_A           91 VYVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDES---------------  153 (342)
T ss_dssp             EEEEECCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSS---------------
T ss_pred             EEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCC---------------
Confidence            99999999 999999998764  799999999999999999999999999999999999985432               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE-  322 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~-  322 (438)
                              .....+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.. 
T Consensus       154 --------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  225 (342)
T 2qr7_A          154 --------GNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD  225 (342)
T ss_dssp             --------CSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT
T ss_pred             --------CCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc
Confidence                    12235899999988764432   234588999999999998889999999999999999999999997632 


Q ss_pred             --hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          323 --NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       323 --~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                        ..+....+......++                                              ......+++++.+||.
T Consensus       226 ~~~~~~~~~i~~~~~~~~----------------------------------------------~~~~~~~s~~~~~li~  259 (342)
T 2qr7_A          226 DTPEEILARIGSGKFSLS----------------------------------------------GGYWNSVSDTAKDLVS  259 (342)
T ss_dssp             SCHHHHHHHHHHCCCCCC----------------------------------------------STTTTTSCHHHHHHHH
T ss_pred             CCHHHHHHHHccCCcccC----------------------------------------------ccccccCCHHHHHHHH
Confidence              2333333322111100                                              0112356789999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCC
Q 013678          401 GLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      +||+.||++|||+.|+++||||.+.
T Consensus       260 ~~L~~dP~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          260 KMLHVDPHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             HHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred             HHCCCChhHCcCHHHHhcCCeecCc
Confidence            9999999999999999999999663

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.7e-50  Score=393.41  Aligned_cols=281  Identities=30%  Similarity=0.533  Sum_probs=222.2

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec-----
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD-----  163 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~-----  163 (438)
                      ...++|++.+.||+|+||.||+|++..+|+.||||++.....   ...+|+.+++.++|+||     +++++++.     
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~hpnI-----v~l~~~~~~~~~~   75 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNI-----IKLVDYFYTTGDE   75 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCCTTB-----CCEEEEEEEC---
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCCCCc-----cchhheeeecCcc
Confidence            345789999999999999999999999999999999865432   23469999999988877     99999873     


Q ss_pred             ---------------------------------cCCeEEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHH
Q 013678          164 ---------------------------------YRNHICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVA  208 (438)
Q Consensus       164 ---------------------------------~~~~~~lv~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~  208 (438)
                                                       ....+++||||+.++|.+.+..  .....+++..++.++.||+.||+
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~  155 (383)
T 3eb0_A           76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG  155 (383)
T ss_dssp             ----------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                                             3445999999998898888764  23357999999999999999999


Q ss_pred             HHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC--CCcccccCCCcch
Q 013678          209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRA  286 (438)
Q Consensus       209 ~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~a  286 (438)
                      |||++||+||||||+|||++..                          +..+||+|||++.....  ......||+.|+|
T Consensus       156 ~LH~~gi~H~Dikp~Nil~~~~--------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~a  209 (383)
T 3eb0_A          156 FIHSLGICHRDIKPQNLLVNSK--------------------------DNTLKLCDFGSAKKLIPSEPSVAYICSRFYRA  209 (383)
T ss_dssp             HHHTTTEECSCCCGGGEEEETT--------------------------TTEEEECCCTTCEECCTTSCCCCCCCCSSCCC
T ss_pred             HHHHCcCccCccCHHHEEEcCC--------------------------CCcEEEEECCCCcccCCCCCCcCcccCCCccC
Confidence            9999999999999999999631                          23578888888865432  2334578999999


Q ss_pred             hHHHhCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCC
Q 013678          287 PEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA  365 (438)
Q Consensus       287 PE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (438)
                      ||++.+.. ++.++|||||||++|+|++|+.||.+.+..+++..+.+.+|.++...+........       ...++...
T Consensus       210 PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~-------~~~~~~~~  282 (383)
T 3eb0_A          210 PELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYT-------EVRFPTLK  282 (383)
T ss_dssp             HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC---------CCCCCCC
T ss_pred             HHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccc-------cccCCccC
Confidence            99998764 89999999999999999999999999999999999999999988766544332111       11111111


Q ss_pred             CChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          366 TSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      ..              ..........+.++.+||.+||++||++|||+.|+|+||||++
T Consensus       283 ~~--------------~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          283 AK--------------DWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH  327 (383)
T ss_dssp             CC--------------CHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred             cc--------------cHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence            00              1111223456788999999999999999999999999999974

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.9e-50  Score=395.42  Aligned_cols=309  Identities=18%  Similarity=0.194  Sum_probs=214.4

Q ss_pred             CCceEEEeeeeee--cceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           91 TPRCKILSKMGEG--TFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G--~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .++|+++++||+|  +||.||+|++..+++.||||+++...   ...+.+.+|+.+++.++|+||     +++++++.+.
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~   98 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNI-----VPYRATFIAD   98 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEEET
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCC-----CcEeEEEEEC
Confidence            3689999999999  99999999999999999999997542   345667789999999988877     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+|+||||| +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.  
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~--  176 (389)
T 3gni_B           99 NELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNL--  176 (389)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCE--
T ss_pred             CEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccce--
Confidence            9999999999 9999999988755679999999999999999999999999999999999999888877777776532  


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCccc-CCCCcccccCCCcchhHHHhC--CCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFE-HQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                      .+.+.|..... .......+||..|+|||++.+  ..++.++|||||||++|+|++|..||.+.
T Consensus       177 ----------------~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  240 (389)
T 3gni_B          177 ----------------SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM  240 (389)
T ss_dssp             ----------------ECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ----------------eeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence                            22222222211 112233588999999999988  57899999999999999999999999876


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHh-ccchhhhhhccCCchhHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL-LRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      +..+.+..+...  ..+....... .....+...........  ............ .............+++++.+||.
T Consensus       241 ~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~  315 (389)
T 3gni_B          241 PATQMLLEKLNG--TVPCLLDTST-IPAEELTMSPSRSVANS--GLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVE  315 (389)
T ss_dssp             CSTTHHHHC-------------------------------------------------------------CCHHHHHHHH
T ss_pred             CHHHHHHHHhcC--CCCccccccc-ccccccccccccccccc--ccccccccCccccccCCCCCCccccccCHHHHHHHH
Confidence            665544332211  1111000000 00000000000000000  000000000000 00001111234456889999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          401 GLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      +||+.||++|||+.|+|+||||++...
T Consensus       316 ~~L~~dP~~Rpta~ell~hp~f~~~~~  342 (389)
T 3gni_B          316 QCLQRNPDARPSASTLLNHSFFKQIKR  342 (389)
T ss_dssp             HHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred             HHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence            999999999999999999999987554

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=3e-50  Score=384.60  Aligned_cols=252  Identities=25%  Similarity=0.389  Sum_probs=206.2

Q ss_pred             cCCceEEEeeeeeecceEEEEEEEC---CCCcEEEEEEeecch-----hhHHHHHHHHHHHHHHHhcCCCCcceEEecce
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~  161 (438)
                      ..++|++.+.||+|+||.||+|++.   .+++.||+|++++..     .....+.+|+.+++.++|+||     ++++++
T Consensus        15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~   89 (327)
T 3a62_A           15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI-----VDLIYA   89 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTB-----CCEEEE
T ss_pred             CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCc-----cceeEE
Confidence            3478999999999999999999985   688999999997532     234556789999999988777     999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                      +.+.+.+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.+|         
T Consensus        90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~---------  158 (327)
T 3a62_A           90 FQTGGKLYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQG---------  158 (327)
T ss_dssp             EECSSCEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTS---------
T ss_pred             EEcCCEEEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCC---------
Confidence            99999999999999 899999998764  699999999999999999999999999999999999997665         


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                        .+||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       159 ------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p  220 (327)
T 3a62_A          159 ------------------HVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP  220 (327)
T ss_dssp             ------------------CEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ------------------cEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCC
Confidence                              466777776654221   12335799999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+.+.......+......+                                                  +..++.++.+
T Consensus       221 f~~~~~~~~~~~i~~~~~~~--------------------------------------------------p~~~~~~~~~  250 (327)
T 3a62_A          221 FTGENRKKTIDKILKCKLNL--------------------------------------------------PPYLTQEARD  250 (327)
T ss_dssp             CCCSSHHHHHHHHHHTCCCC--------------------------------------------------CTTSCHHHHH
T ss_pred             CCCCCHHHHHHHHHhCCCCC--------------------------------------------------CCCCCHHHHH
Confidence            99887776665554432111                                                  1245678999


Q ss_pred             HHHHccccCCCCCC-----CHHHHhcCCCCCCC
Q 013678          398 LLQGLLRYDPAERL-----KAREALRHPFFTRD  425 (438)
Q Consensus       398 ll~~~L~~dP~~Rp-----ta~ell~hp~f~~~  425 (438)
                      ||.+||+.||++||     ++.|+++||||++.
T Consensus       251 li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             HHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             HHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence            99999999999999     89999999999863

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=3.2e-50  Score=391.09  Aligned_cols=252  Identities=23%  Similarity=0.427  Sum_probs=209.8

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ..++|++++.||+|+||.||+|++..+++.||+|++.+..    ...+.+.+|+.+++.++|+||     +++++++.+.
T Consensus        13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~I-----v~l~~~~~~~   87 (384)
T 4fr4_A           13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFL-----VNLWYSFQDE   87 (384)
T ss_dssp             CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTB-----CCEEEEEECS
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCC-----CcEEEEEEeC
Confidence            3478999999999999999999999999999999997532    234677889999999988777     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+|+||||+ |++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.+|             
T Consensus        88 ~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g-------------  152 (384)
T 4fr4_A           88 EDMFMVVDLLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHG-------------  152 (384)
T ss_dssp             SEEEEEECCCTTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-------------
T ss_pred             CEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCC-------------
Confidence            9999999999 999999998754  799999999999999999999999999999999999997665             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhC---CCCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                    .+||+|||++......  ....+||+.|+|||++.+   ..++.++|||||||++|+|++|..||.
T Consensus       153 --------------~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~  218 (384)
T 4fr4_A          153 --------------HVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH  218 (384)
T ss_dssp             --------------CEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             --------------CEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCC
Confidence                          5677777777654322  234689999999999974   458999999999999999999999997


Q ss_pred             CCChH---HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          320 THENL---EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       320 ~~~~~---~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      .....   .....+.....                                                  ..+..++.++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~--------------------------------------------------~~p~~~s~~~~  248 (384)
T 4fr4_A          219 IRSSTSSKEIVHTFETTVV--------------------------------------------------TYPSAWSQEMV  248 (384)
T ss_dssp             CCTTSCHHHHHHHHHHCCC--------------------------------------------------CCCTTSCHHHH
T ss_pred             CCCCccHHHHHHHHhhccc--------------------------------------------------CCCCcCCHHHH
Confidence            54332   22222211111                                                  12234577899


Q ss_pred             HHHHHccccCCCCCCC-HHHHhcCCCCCCC
Q 013678          397 DLLQGLLRYDPAERLK-AREALRHPFFTRD  425 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpt-a~ell~hp~f~~~  425 (438)
                      +||.+||+.||.+||+ ++++++||||++-
T Consensus       249 ~li~~lL~~dP~~R~s~~~~l~~hp~f~~~  278 (384)
T 4fr4_A          249 SLLKKLLEPNPDQRFSQLSDVQNFPYMNDI  278 (384)
T ss_dssp             HHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred             HHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence            9999999999999998 9999999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.5e-50  Score=393.62  Aligned_cols=255  Identities=27%  Similarity=0.378  Sum_probs=211.4

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ..++|++++.||+|+||.||+|+++.+++.||||++++..    ...+.+.+|+.++..+.|++|     +++++++.+.
T Consensus        59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~I-----v~l~~~~~~~  133 (412)
T 2vd5_A           59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWI-----TQLHFAFQDE  133 (412)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTB-----CCEEEEEECS
T ss_pred             ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCe-----eeEEEEEeeC
Confidence            4578999999999999999999999999999999997532    223457789999999888777     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+||||||+ |++|.+++.+.+ ..+++..++.++.||+.||+|||++||+||||||+|||++.+|             
T Consensus       134 ~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g-------------  199 (412)
T 2vd5_A          134 NYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCG-------------  199 (412)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS-------------
T ss_pred             CEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCC-------------
Confidence            9999999999 999999998753 3699999999999999999999999999999999999997666             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHh-------CCCCCcchhHHHHHHHHHHHHh
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVIL-------GLGWNYPCDLWSVGCILVELCS  313 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~-------~~~~~~~~DiwSlG~il~ellt  313 (438)
                                    .+||+|||++.......    ...+||+.|+|||++.       +..++.++|||||||++|||++
T Consensus       200 --------------~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyellt  265 (412)
T 2vd5_A          200 --------------HIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY  265 (412)
T ss_dssp             --------------CEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHH
T ss_pred             --------------CEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHh
Confidence                          46666666665443322    2358999999999998       3468999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHh--CCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCc
Q 013678          314 GEALFQTHENLEHLAMMERVL--GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  391 (438)
Q Consensus       314 g~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (438)
                      |+.||.+.+..+....+....  ..+|                                               .....+
T Consensus       266 G~~Pf~~~~~~~~~~~i~~~~~~~~~p-----------------------------------------------~~~~~~  298 (412)
T 2vd5_A          266 GQTPFYADSTAETYGKIVHYKEHLSLP-----------------------------------------------LVDEGV  298 (412)
T ss_dssp             SSCTTCCSSHHHHHHHHHTHHHHCCCC---------------------------------------------------CC
T ss_pred             CCCCCCCCCHHHHHHHHHhcccCcCCC-----------------------------------------------ccccCC
Confidence            999999888777666654321  1111                                               011346


Q ss_pred             hhHHHHHHHHccccCCCCC---CCHHHHhcCCCCCCC
Q 013678          392 AGDLIDLLQGLLRYDPAER---LKAREALRHPFFTRD  425 (438)
Q Consensus       392 ~~~l~~ll~~~L~~dP~~R---pta~ell~hp~f~~~  425 (438)
                      ++++++||++||. +|.+|   ++++|+++||||++-
T Consensus       299 s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i  334 (412)
T 2vd5_A          299 PEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL  334 (412)
T ss_dssp             CHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence            7899999999999 99998   599999999999864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=3.4e-50  Score=390.76  Aligned_cols=258  Identities=29%  Similarity=0.437  Sum_probs=211.3

Q ss_pred             CCceEE--EeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           91 TPRCKI--LSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        91 ~~~y~~--~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ...|.+  .+.||+|+||.||+|.+..+|+.||+|+++... ...+.+.+|+.+++.++|+||     +++++++.+.+.
T Consensus        86 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~~~~~~~~~~~  160 (373)
T 2x4f_A           86 NSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANL-----IQLYDAFESKND  160 (373)
T ss_dssp             GGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEECSSE
T ss_pred             ccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCC-----CeEEEEEEECCE
Confidence            344555  678999999999999999999999999997543 455678899999999988777     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      ++|||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||+..+                
T Consensus       161 ~~lv~E~~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~----------------  223 (373)
T 2x4f_A          161 IVLVMEYVDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNR----------------  223 (373)
T ss_dssp             EEEEEECCTTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEET----------------
T ss_pred             EEEEEeCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecC----------------
Confidence            99999999 899999987643 369999999999999999999999999999999999999542                


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                               ....+||+|||++.......  ...+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus       224 ---------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~  294 (373)
T 2x4f_A          224 ---------DAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA  294 (373)
T ss_dssp             ---------TTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             ---------CCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                     22357888888887654332  2357999999999999888999999999999999999999999998887


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +.+..+......++.                                              .....+++++.+||.+||+
T Consensus       295 ~~~~~i~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~~L~  328 (373)
T 2x4f_A          295 ETLNNILACRWDLED----------------------------------------------EEFQDISEEAKEFISKLLI  328 (373)
T ss_dssp             HHHHHHHHTCCCSCS----------------------------------------------GGGTTSCHHHHHHHHTTSC
T ss_pred             HHHHHHHhccCCCCh----------------------------------------------hhhccCCHHHHHHHHHHcC
Confidence            776666543222111                                              1123457799999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .||.+|||+.|+|+||||++.
T Consensus       329 ~dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          329 KEKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             SSGGGSCCHHHHHHSHHHHCH
T ss_pred             CChhhCCCHHHHhcCcCcCCC
Confidence            999999999999999999864

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=4.3e-50  Score=383.16  Aligned_cols=260  Identities=28%  Similarity=0.488  Sum_probs=193.9

Q ss_pred             cCCceEEE---eeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHH-hcCCCCcceEEecceeccC
Q 013678           90 LTPRCKIL---SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        90 ~~~~y~~~---~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~  165 (438)
                      +.++|++.   +.||+|+||.||+|.+..+++.||||++...  ......+|+.+++.+. |+||     +++++++.+.
T Consensus         6 f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~ni-----v~~~~~~~~~   78 (325)
T 3kn6_A            6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNI-----VKLHEVFHDQ   78 (325)
T ss_dssp             HHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTB-----CCEEEEEECS
T ss_pred             chhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCe-----eEEEEEEEcC
Confidence            34678876   7899999999999999999999999999753  3466788999999997 6666     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      ...|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++             
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~-------------  143 (325)
T 3kn6_A           79 LHTFLVMELLNGGELFERIKKKK--HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN-------------  143 (325)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC---------------
T ss_pred             CEEEEEEEccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCC-------------
Confidence            9999999999 899999998764  799999999999999999999999999999999999997644             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                 ....+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus       144 -----------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  212 (325)
T 3kn6_A          144 -----------DNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH  212 (325)
T ss_dssp             -------------CEEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred             -----------CcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence                       2336888888888754332   23457899999999999999999999999999999999999999764


Q ss_pred             ChH-------HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          322 ENL-------EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       322 ~~~-------~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      +..       +....+......++                                              ......++++
T Consensus       213 ~~~~~~~~~~~~~~~i~~~~~~~~----------------------------------------------~~~~~~~s~~  246 (325)
T 3kn6_A          213 DRSLTCTSAVEIMKKIKKGDFSFE----------------------------------------------GEAWKNVSQE  246 (325)
T ss_dssp             -----CCCHHHHHHHHTTTCCCCC----------------------------------------------SHHHHTSCHH
T ss_pred             ccccccccHHHHHHHHHcCCCCCC----------------------------------------------cccccCCCHH
Confidence            432       11111111100000                                              0111345779


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          395 LIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      +.+||.+||+.||++|||+.|+++||||++....
T Consensus       247 ~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~  280 (325)
T 3kn6_A          247 AKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQL  280 (325)
T ss_dssp             HHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCCC
T ss_pred             HHHHHHHHCCCChhHCCCHHHHhcChhhccCccC
Confidence            9999999999999999999999999999986544

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=8.6e-50  Score=387.25  Aligned_cols=251  Identities=26%  Similarity=0.390  Sum_probs=202.4

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh----hHHHHHHHHHH-HHHHHhcCCCCcceEEecceeccC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDV-LQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~-l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .++|++++.||+|+||.||+|+++.+++.||||++++...    ....+.+|..+ ++.+.|     +|++++++++.+.
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~h-----p~Iv~l~~~~~~~  111 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH-----PFLVGLHFSFQTA  111 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCC-----TTBCCEEEEEECS
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCC-----CCCCCEEEEEEeC
Confidence            3689999999999999999999999999999999976432    22334455554 233444     5559999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+|+||||+ |++|.+++.+..  .+++..++.++.||+.||+|||++||+||||||+|||++.+|             
T Consensus       112 ~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g-------------  176 (373)
T 2r5t_A          112 DKLYFVLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG-------------  176 (373)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-------------
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCC-------------
Confidence            9999999999 999999998764  799999999999999999999999999999999999997766             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                    .+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.
T Consensus       177 --------------~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~  242 (373)
T 2r5t_A          177 --------------HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR  242 (373)
T ss_dssp             --------------CEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             --------------CEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence                          46666666665421   2234468999999999999999999999999999999999999999988


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +..+....+.....                                                  .....++.++.+||.+
T Consensus       243 ~~~~~~~~i~~~~~--------------------------------------------------~~~~~~~~~~~~li~~  272 (373)
T 2r5t_A          243 NTAEMYDNILNKPL--------------------------------------------------QLKPNITNSARHLLEG  272 (373)
T ss_dssp             BHHHHHHHHHHSCC--------------------------------------------------CCCSSSCHHHHHHHHH
T ss_pred             CHHHHHHHHHhccc--------------------------------------------------CCCCCCCHHHHHHHHH
Confidence            77666655543211                                                  1123457789999999


Q ss_pred             ccccCCCCCCCH----HHHhcCCCCCCC
Q 013678          402 LLRYDPAERLKA----REALRHPFFTRD  425 (438)
Q Consensus       402 ~L~~dP~~Rpta----~ell~hp~f~~~  425 (438)
                      ||+.||.+|+++    .++++||||+.-
T Consensus       273 lL~~dp~~R~~~~~~~~~i~~h~~f~~~  300 (373)
T 2r5t_A          273 LLQKDRTKRLGAKDDFMEIKSHVFFSLI  300 (373)
T ss_dssp             HTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred             HcccCHHhCCCCCCCHHHHhCCccccCC
Confidence            999999999986    699999999863

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=9.1e-50  Score=373.94  Aligned_cols=259  Identities=27%  Similarity=0.408  Sum_probs=211.1

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      .+.++|++.++||+|+||.||+|.+..+++.||+|++....  ...+.+.+|+.+++.++|+||     +++++++.+.+
T Consensus        19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~   93 (285)
T 3is5_A           19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI-----IKIFEVFEDYH   93 (285)
T ss_dssp             CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTB-----CCEEEEEECSS
T ss_pred             ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchH-----HhHHHheecCC
Confidence            46689999999999999999999999999999999987543  345778899999999988777     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          167 HICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      ..|+||||+ +++|.+++...  ....+++..++.++.||+.||+|||++||+||||||+|||++..+            
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~------------  161 (285)
T 3is5_A           94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS------------  161 (285)
T ss_dssp             EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSS------------
T ss_pred             eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCC------------
Confidence            999999999 89999998643  224799999999999999999999999999999999999995422            


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                  ....+||+|||++......  .....||+.|+|||++. ..++.++|||||||++|+|++|..||.+.
T Consensus       162 ------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~  228 (285)
T 3is5_A          162 ------------PHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT  228 (285)
T ss_dssp             ------------TTCCEEECCCCCCCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ------------CCCCEEEEeeecceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC
Confidence                        3446899999988764432  23457899999999975 46899999999999999999999999887


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +..+....+.......+                                               .....+++++.+||.+
T Consensus       229 ~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~li~~  261 (285)
T 3is5_A          229 SLEEVQQKATYKEPNYA-----------------------------------------------VECRPLTPQAVDLLKQ  261 (285)
T ss_dssp             SHHHHHHHHHHCCCCCC-----------------------------------------------C--CCCCHHHHHHHHH
T ss_pred             CHHHHHhhhccCCcccc-----------------------------------------------cccCcCCHHHHHHHHH
Confidence            66554433322111100                                               0112356789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCC
Q 013678          402 LLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      ||+.||++|||+.|+|+||||++
T Consensus       262 ~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          262 MLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             HTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             HccCChhhCcCHHHHhcCHHhhc
Confidence            99999999999999999999986

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=2.9e-50  Score=400.95  Aligned_cols=252  Identities=25%  Similarity=0.412  Sum_probs=206.7

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ..++|++++.||+|+||.||+|.+..+++.||||+++...    .....+.+|+.+++.++|+||     +++++++.+.
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~l~~~~~~~  220 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL-----TALKYSFQTH  220 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTS-----CCEEEEEEET
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeE-----eeEEEEEeeC
Confidence            3478999999999999999999999999999999997532    233456778888888887777     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      +.+||||||+ +++|.+++....  .+++..++.++.||+.||+|||+ +||+||||||+|||++.++            
T Consensus       221 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~------------  286 (446)
T 4ejn_A          221 DRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG------------  286 (446)
T ss_dssp             TEEEEEECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSS------------
T ss_pred             CEEEEEEeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCC------------
Confidence            9999999999 999999998765  79999999999999999999998 9999999999999997655            


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                     .+||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|||++|..||.+
T Consensus       287 ---------------~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  351 (446)
T 4ejn_A          287 ---------------HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN  351 (446)
T ss_dssp             ---------------CEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ---------------CEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence                           567777777654222   22346899999999999999999999999999999999999999988


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      .+.......+......+                                                  +..+++++.+||.
T Consensus       352 ~~~~~~~~~i~~~~~~~--------------------------------------------------p~~~~~~~~~li~  381 (446)
T 4ejn_A          352 QDHEKLFELILMEEIRF--------------------------------------------------PRTLGPEAKSLLS  381 (446)
T ss_dssp             SSHHHHHHHHHHCCCCC--------------------------------------------------CTTSCHHHHHHHH
T ss_pred             CCHHHHHHHHHhCCCCC--------------------------------------------------CccCCHHHHHHHH
Confidence            87766665554321111                                                  1245678999999


Q ss_pred             HccccCCCCCC-----CHHHHhcCCCCCCC
Q 013678          401 GLLRYDPAERL-----KAREALRHPFFTRD  425 (438)
Q Consensus       401 ~~L~~dP~~Rp-----ta~ell~hp~f~~~  425 (438)
                      +||+.||++||     |++|+++||||++.
T Consensus       382 ~~L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          382 GLLKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             HHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence            99999999999     99999999999874

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=6.7e-50  Score=373.11  Aligned_cols=262  Identities=24%  Similarity=0.410  Sum_probs=220.7

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      .+.++|++.+.||+|+||.||+|.+..++..||+|++... ....+.+.+|+.+++.++|+||     +++++++.+.+.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~   80 (277)
T 3f3z_A            6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI-----IRLYETFEDNTD   80 (277)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTB-----CCEEEEEECSSE
T ss_pred             hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCE-----eeEEEEEecCCe
Confidence            4568899999999999999999999999999999998753 2345778899999999988776     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      .|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||+..++               
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~---------------  143 (277)
T 3f3z_A           81 IYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDS---------------  143 (277)
T ss_dssp             EEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS---------------
T ss_pred             EEEEEeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCC---------------
Confidence            99999999 899999998765  699999999999999999999999999999999999994321               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                               .+..++|+|||++......  .....||+.|+|||++.+. ++.++|||||||++|+|++|..||...+..
T Consensus       144 ---------~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~  213 (277)
T 3f3z_A          144 ---------PDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS  213 (277)
T ss_dssp             ---------TTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ---------CCCcEEEEecccceeccCccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH
Confidence                     3446888888888654432  2345799999999998764 899999999999999999999999988877


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +....+.......|...                                              ...+++++.+||.+||+
T Consensus       214 ~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~li~~~l~  247 (277)
T 3f3z_A          214 EVMLKIREGTFTFPEKD----------------------------------------------WLNVSPQAESLIRRLLT  247 (277)
T ss_dssp             HHHHHHHHCCCCCCHHH----------------------------------------------HTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHhCCCCCCchh----------------------------------------------hhcCCHHHHHHHHHHcc
Confidence            77666655433333211                                              12456789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      .||++|||+.|+|+||||++....
T Consensus       248 ~dp~~R~s~~~~l~h~~~~~~~~~  271 (277)
T 3f3z_A          248 KSPKQRITSLQALEHEWFEKQLSS  271 (277)
T ss_dssp             SSTTTSCCHHHHTTSHHHHHHHCC
T ss_pred             CChhhCcCHHHHhcCHHHhccccc
Confidence            999999999999999999875443

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.6e-50  Score=381.56  Aligned_cols=251  Identities=23%  Similarity=0.392  Sum_probs=202.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh---------------------------hHHHHHHHHHHHH
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---------------------------YREAAMIEIDVLQ  143 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------------------------~~~~~~~E~~~l~  143 (438)
                      .++|++.+.||+|+||.||+|++..+++.||||++.....                           ..+.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999865321                           1245788999999


Q ss_pred             HHHhcCCCCcceEEecceecc--CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Q 013678          144 RLARHDIGGTRCVQIRNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL  220 (438)
Q Consensus       144 ~l~~~~i~~~~iv~~~~~~~~--~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  220 (438)
                      .++|+||     +++++++.+  .+.+|+||||+ +++|.+++..   ..+++..++.++.||+.||+|||++||+||||
T Consensus        92 ~l~h~~i-----v~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dl  163 (298)
T 2zv2_A           92 KLDHPNV-----VKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDI  163 (298)
T ss_dssp             TCCCTTB-----CCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             hCCCCCC-----CeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            9988777     999999886  57899999999 8898876543   36999999999999999999999999999999


Q ss_pred             CCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCC---
Q 013678          221 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLG---  294 (438)
Q Consensus       221 kp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~---  294 (438)
                      ||+|||++.++                           .+||+|||++.......   ....||+.|+|||++.+..   
T Consensus       164 kp~Nil~~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  216 (298)
T 2zv2_A          164 KPSNLLVGEDG---------------------------HIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIF  216 (298)
T ss_dssp             CGGGEEECTTS---------------------------CEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCE
T ss_pred             CHHHEEECCCC---------------------------CEEEecCCCccccccccccccCCcCCccccChhhhccCCCCC
Confidence            99999997655                           56777777766543322   2357999999999998765   


Q ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHH
Q 013678          295 WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV  374 (438)
Q Consensus       295 ~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (438)
                      ++.++|||||||++|+|++|..||...+.......+.......                                     
T Consensus       217 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------------------------------------  259 (298)
T 2zv2_A          217 SGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEF-------------------------------------  259 (298)
T ss_dssp             ESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-------------------------------------
T ss_pred             CCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCC-------------------------------------
Confidence            3788999999999999999999998776554443332211111                                     


Q ss_pred             HHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                                 .....+++++.+||.+||+.||++|||+.|+++||||++
T Consensus       260 -----------~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          260 -----------PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             -----------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred             -----------CCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence                       011345778999999999999999999999999999963

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=7.6e-50  Score=385.72  Aligned_cols=286  Identities=27%  Similarity=0.472  Sum_probs=221.9

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc---
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY---  164 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~---  164 (438)
                      .++|+++++||+|+||.||+|++..+|+.||||++....   .....+.+|+.+++.++|+||     +++++++..   
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~   90 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV-----VNLIEICRTKAS   90 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTB-----CCEEEEEEEC--
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCc-----ccHhheeecccc
Confidence            378999999999999999999999999999999985432   234567899999999988877     999988876   


Q ss_pred             -----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          165 -----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       165 -----~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                           .+.+|+||||+.++|.+.+.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++        
T Consensus        91 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~--------  161 (351)
T 3mi9_A           91 PYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--------  161 (351)
T ss_dssp             ------CEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--------
T ss_pred             ccccCCceEEEEEeccCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC--------
Confidence                 45799999999879998887653 4699999999999999999999999999999999999997666        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCC-------CCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHH
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-------DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVEL  311 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~el  311 (438)
                                         .+||+|||++.....       ......||+.|+|||++.+. .++.++|||||||++|+|
T Consensus       162 -------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el  222 (351)
T 3mi9_A          162 -------------------VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM  222 (351)
T ss_dssp             -------------------CEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHH
T ss_pred             -------------------CEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHH
Confidence                               456666666644321       12235789999999999874 589999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCc
Q 013678          312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  391 (438)
Q Consensus       312 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (438)
                      ++|..||.+.+.......+....+.++...+........  +.   .........  ........           ....
T Consensus       223 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~--~~~~~~~~-----------~~~~  284 (351)
T 3mi9_A          223 WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYEL--YE---KLELVKGQK--RKVKDRLK-----------AYVR  284 (351)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGG--GT---SSCCCSSCC--CCHHHHHH-----------HHHC
T ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchh--hc---ccccccccc--cCHHHHhh-----------hccC
Confidence            999999999999999999999988887655333221110  00   000000000  00000000           0012


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       392 ~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      ++.+.+||.+||+.||++|||++|+|+||||++...
T Consensus       285 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  320 (351)
T 3mi9_A          285 DPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPM  320 (351)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSC
T ss_pred             ChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCC
Confidence            567899999999999999999999999999987644

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=3.6e-50  Score=375.42  Aligned_cols=256  Identities=27%  Similarity=0.452  Sum_probs=214.8

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....    .....+.+|+.+++.++|+||     +++++++.+.+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   82 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-----LRLYGYFHDAT   82 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTB-----CCEEEEEECSS
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCC-----cchhheEecCC
Confidence            478999999999999999999999999999999986532    234567889999999888777     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ..++||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++              
T Consensus        83 ~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~--------------  146 (279)
T 3fdn_A           83 RVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG--------------  146 (279)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTS--------------
T ss_pred             EEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCC--------------
Confidence            999999999 899999998764  699999999999999999999999999999999999997665              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                   .++|+|||++...... .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus       147 -------------~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~  213 (279)
T 3fdn_A          147 -------------ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ  213 (279)
T ss_dssp             -------------CEEECSCCEESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             -------------CEEEEeccccccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH
Confidence                         4666777766443322 23357899999999999999999999999999999999999999987776


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +....+.......|                                                  ..+++.+.+||.+||+
T Consensus       214 ~~~~~~~~~~~~~~--------------------------------------------------~~~~~~~~~li~~~l~  243 (279)
T 3fdn_A          214 ETYKRISRVEFTFP--------------------------------------------------DFVTEGARDLISRLLK  243 (279)
T ss_dssp             HHHHHHHHTCCCCC--------------------------------------------------TTSCHHHHHHHHHHCC
T ss_pred             HHHHHHHhCCCCCC--------------------------------------------------CcCCHHHHHHHHHHhc
Confidence            66655544322221                                                  2356789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCCCCce
Q 013678          405 YDPAERLKAREALRHPFFTRDVRRPT  430 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~~~~~~  430 (438)
                      .||++|||+.|+++||||+.....+.
T Consensus       244 ~~p~~Rps~~e~l~h~~~~~~~~~~~  269 (279)
T 3fdn_A          244 HNPSQRPMLREVLEHPWITANSSKPS  269 (279)
T ss_dssp             SSGGGSCCHHHHHHCHHHHHHCSSCC
T ss_pred             cChhhCCCHHHHhhCccccCCccCcc
Confidence            99999999999999999988766554

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=1e-49  Score=379.08  Aligned_cols=265  Identities=25%  Similarity=0.396  Sum_probs=205.2

Q ss_pred             CccCCceEEE-eeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHH-HhcCCCCcceEEecceecc
Q 013678           88 ENLTPRCKIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        88 ~~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~  164 (438)
                      ..+.++|++. +.||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.++.++ .|+||     +++++++.+
T Consensus         8 ~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i-----~~~~~~~~~   82 (316)
T 2ac3_A            8 GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNV-----LELIEFFEE   82 (316)
T ss_dssp             CCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTB-----CCEEEEEEE
T ss_pred             cccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCe-----eeEEEEEee
Confidence            3466889996 78999999999999999999999999997543 3456788999999885 56665     999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      .+.+|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.           
T Consensus        83 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~-----------  149 (316)
T 2ac3_A           83 EDRFYLVFEKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQ-----------  149 (316)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSS-----------
T ss_pred             CCEEEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCC-----------
Confidence            99999999999 899999998764  6999999999999999999999999999999999999976542           


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCC----------CcccccCCCcchhHHHhC-----CCCCcchhHHHHHHHH
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCIL  308 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il  308 (438)
                                   ...+||+|||++......          ....+||+.|+|||++.+     ..++.++|||||||++
T Consensus       150 -------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il  216 (316)
T 2ac3_A          150 -------------VSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL  216 (316)
T ss_dssp             -------------SCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHH
T ss_pred             -------------cCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHH
Confidence                         224778888877643211          122469999999999975     4578999999999999


Q ss_pred             HHHHhCCCCCCCCChHH---------------HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHH
Q 013678          309 VELCSGEALFQTHENLE---------------HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA  373 (438)
Q Consensus       309 ~elltg~~pf~~~~~~~---------------~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (438)
                      |+|++|..||.+....+               ....+......+|                                   
T Consensus       217 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----------------------------------  261 (316)
T 2ac3_A          217 YILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFP-----------------------------------  261 (316)
T ss_dssp             HHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCC-----------------------------------
T ss_pred             HHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccC-----------------------------------
Confidence            99999999997653211               1111111100000                                   


Q ss_pred             HHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                                 ......++.++.+||.+||+.||++|||+.|+|+||||++.....
T Consensus       262 -----------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~~~  306 (316)
T 2ac3_A          262 -----------DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPEN  306 (316)
T ss_dssp             -----------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC------
T ss_pred             -----------chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCCcc
Confidence                       011234677899999999999999999999999999999765443

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=2.5e-50  Score=405.73  Aligned_cols=267  Identities=29%  Similarity=0.492  Sum_probs=223.7

Q ss_pred             eeeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEE
Q 013678           82 YVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQ  157 (438)
Q Consensus        82 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~  157 (438)
                      +....+..+.++|++.+.||+|+||.||+|++..+++.||||++...    ....+.+.+|+.+++.++|+||     ++
T Consensus        16 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~   90 (484)
T 3nyv_A           16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI-----MK   90 (484)
T ss_dssp             ---CCCCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTB-----CC
T ss_pred             eeccCCCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCC-----Cc
Confidence            33344567789999999999999999999999999999999998643    3346778899999999988777     99


Q ss_pred             ecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccC
Q 013678          158 IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  236 (438)
Q Consensus       158 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~  236 (438)
                      +++++.+.+.+|+||||| +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++..+     
T Consensus        91 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~-----  163 (484)
T 3nyv_A           91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKS-----  163 (484)
T ss_dssp             EEEEEECSSEEEEEECCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS-----
T ss_pred             EEEEEEeCCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCC-----
Confidence            999999999999999999 999999998764  799999999999999999999999999999999999995421     


Q ss_pred             CccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhC
Q 013678          237 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       237 df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg  314 (438)
                                         .+..+||+|||++.......  ...+||+.|+|||++.+ .++.++|||||||++|+|++|
T Consensus       164 -------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g  223 (484)
T 3nyv_A          164 -------------------KDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG  223 (484)
T ss_dssp             -------------------TTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHS
T ss_pred             -------------------CCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHC
Confidence                               34568999999887654332  33579999999999877 689999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      ..||.+.+..+.+..+......++                                              ......++++
T Consensus       224 ~~pf~~~~~~~~~~~i~~~~~~~~----------------------------------------------~~~~~~~s~~  257 (484)
T 3nyv_A          224 CPPFNGANEYDILKKVEKGKYTFE----------------------------------------------LPQWKKVSES  257 (484)
T ss_dssp             SCSSCCSSHHHHHHHHHHCCCCCC----------------------------------------------SGGGGGSCHH
T ss_pred             CCCCCCCCHHHHHHHHHcCCCCCC----------------------------------------------CcccccCCHH
Confidence            999999888777766654322211                                              0112345778


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          395 LIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +.+||.+||+.||++|||+.|+|+||||+...
T Consensus       258 ~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          258 AKDLIRKMLTYVPSMRISARDALDHEWIQTYT  289 (484)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence            99999999999999999999999999997643

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=4.5e-50  Score=383.52  Aligned_cols=275  Identities=23%  Similarity=0.349  Sum_probs=224.3

Q ss_pred             CCCceeeecCCccCCceEEE-eeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCc
Q 013678           78 KDGHYVFAIGENLTPRCKIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGT  153 (438)
Q Consensus        78 ~~~~~~~~~~~~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~  153 (438)
                      ..+...+...+.+.++|.+. +.||+|+||.||+|.+..+++.||+|++....   .....+.+|+.++..+.++    +
T Consensus        14 ~~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~----~   89 (327)
T 3lm5_A           14 GTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSC----P   89 (327)
T ss_dssp             --CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTC----T
T ss_pred             cchhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCC----C
Confidence            33445566778899999998 89999999999999999999999999987532   3356788999999998652    3


Q ss_pred             ceEEecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcc
Q 013678          154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY  232 (438)
Q Consensus       154 ~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~  232 (438)
                      |++++++++.+.+.+|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++... 
T Consensus        90 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~-  168 (327)
T 3lm5_A           90 RVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIY-  168 (327)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBT-
T ss_pred             CEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCC-
Confidence            4499999999999999999999 88999998765456799999999999999999999999999999999999996521 


Q ss_pred             cccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHH
Q 013678          233 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE  310 (438)
Q Consensus       233 ~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e  310 (438)
                                             ....+||+|||++.......  ....||+.|+|||++.+..++.++|||||||++|+
T Consensus       169 -----------------------~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~  225 (327)
T 3lm5_A          169 -----------------------PLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYM  225 (327)
T ss_dssp             -----------------------TBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred             -----------------------CCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHH
Confidence                                   13467888888876654332  33579999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC
Q 013678          311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  390 (438)
Q Consensus       311 lltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (438)
                      |++|..||.+.+..+....+.......+.                                              .....
T Consensus       226 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~  259 (327)
T 3lm5_A          226 LLTHTSPFVGEDNQETYLNISQVNVDYSE----------------------------------------------ETFSS  259 (327)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCCCT----------------------------------------------TTTTT
T ss_pred             HHhCCCCCCCCCchHHHHHHHhcccccCc----------------------------------------------hhhcc
Confidence            99999999988887776666554332221                                              11234


Q ss_pred             chhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       391 ~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +++.+.+||.+||+.||++|||++|+|+||||++..
T Consensus       260 ~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~  295 (327)
T 3lm5_A          260 VSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWD  295 (327)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCC
T ss_pred             cCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccc
Confidence            567899999999999999999999999999998753

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=4.9e-50  Score=403.66  Aligned_cols=262  Identities=30%  Similarity=0.521  Sum_probs=221.7

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+.++|+++++||+|+||+||+|.+..+++.||||++...   ......+.+|+.+++.++|+||     +++++++.+.
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~   93 (486)
T 3mwu_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI-----MKLFEILEDS   93 (486)
T ss_dssp             HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTB-----CCEEEEEECS
T ss_pred             ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCc-----CeEEEEEEcC
Confidence            4678999999999999999999999999999999999642   2345678899999999988877     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+|+||||| +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++..+             
T Consensus        94 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~-------------  158 (486)
T 3mwu_A           94 SSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE-------------  158 (486)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSS-------------
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC-------------
Confidence            9999999999 999999997764  799999999999999999999999999999999999996532             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                 ....+||+|||++.......  ...+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+
T Consensus       159 -----------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~  226 (486)
T 3mwu_A          159 -----------KDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN  226 (486)
T ss_dssp             -----------TTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             -----------CCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                       34468999999987654332  34589999999999876 58999999999999999999999999988


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ..+.+..+......++.                                              .....+++++.+||.+|
T Consensus       227 ~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~  260 (486)
T 3mwu_A          227 EYDILKRVETGKYAFDL----------------------------------------------PQWRTISDDAKDLIRKM  260 (486)
T ss_dssp             HHHHHHHHHHTCCCSCS----------------------------------------------GGGGGSCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCC----------------------------------------------cccCCCCHHHHHHHHHH
Confidence            87777666543221110                                              11234577899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      |+.||++|||+.|+|+||||++....
T Consensus       261 L~~dp~~R~t~~~~l~hp~~~~~~~~  286 (486)
T 3mwu_A          261 LTFHPSLRITATQCLEHPWIQKYSSE  286 (486)
T ss_dssp             TCSSTTTSCCHHHHHHCHHHHHTCCC
T ss_pred             cCCChhhCcCHHHHhcCHhhccCccc
Confidence            99999999999999999999875443

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=3.6e-50  Score=400.94  Aligned_cols=256  Identities=26%  Similarity=0.377  Sum_probs=215.7

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      ....++|.+.+.||+|+||.||+|++..+|+.||||++....    ...+.+.+|+.+++.++|+||     +++++++.
T Consensus        12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnI-----v~l~~~~~   86 (476)
T 2y94_A           12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHI-----IKLYQVIS   86 (476)
T ss_dssp             CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTB-----CCEEEEEE
T ss_pred             CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCC-----CcEEEEEE
Confidence            445578999999999999999999999999999999997532    234678899999999988777     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      +.+.+|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++           
T Consensus        87 ~~~~~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~-----------  153 (476)
T 2y94_A           87 TPSDIFMVMEYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHM-----------  153 (476)
T ss_dssp             CSSEEEEEEECCSSEEHHHHTTSSS--SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTC-----------
T ss_pred             ECCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCC-----------
Confidence            999999999999 999999997654  799999999999999999999999999999999999997655           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCC-CcchhHHHHHHHHHHHHhCCCCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                      .+||+|||++......  ....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.
T Consensus       154 ----------------~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~  217 (476)
T 2y94_A          154 ----------------NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD  217 (476)
T ss_dssp             ----------------CEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ----------------CeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCC
Confidence                            5677777776654332  234589999999999998775 789999999999999999999998


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      +.+.......+......                                                  .+..+++++.+||
T Consensus       218 ~~~~~~~~~~i~~~~~~--------------------------------------------------~p~~~s~~~~~Li  247 (476)
T 2y94_A          218 DDHVPTLFKKICDGIFY--------------------------------------------------TPQYLNPSVISLL  247 (476)
T ss_dssp             CSSSHHHHHHHHTTCCC--------------------------------------------------CCTTCCHHHHHHH
T ss_pred             CCCHHHHHHHHhcCCcC--------------------------------------------------CCccCCHHHHHHH
Confidence            87766655544332111                                                  1123567899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          400 QGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      .+||+.||++|||+.|+++||||++...
T Consensus       248 ~~~L~~dP~~Rpt~~eil~hp~~~~~~~  275 (476)
T 2y94_A          248 KHMLQVDPMKRATIKDIREHEWFKQDLP  275 (476)
T ss_dssp             HHHTCSSTTTSCCHHHHHTCHHHHTTCC
T ss_pred             HHHcCCCchhCcCHHHHHhCHHhhhcCc
Confidence            9999999999999999999999987643

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=5.9e-50  Score=403.75  Aligned_cols=261  Identities=29%  Similarity=0.491  Sum_probs=218.1

Q ss_pred             cCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           86 IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      ....+.++|+++++||+|+||.||+|++..+++.||||++...   ......+.+|+.+++.++|+||     +++++++
T Consensus        31 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~  105 (494)
T 3lij_A           31 KKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI-----MKLYDFF  105 (494)
T ss_dssp             CBCCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTB-----CCEEEEE
T ss_pred             CCCchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCC-----CeEEEEE
Confidence            3445678999999999999999999999999999999999753   2335678899999999988777     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      .+.+.+|+||||| +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++..+          
T Consensus       106 ~~~~~~~lv~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~----------  173 (494)
T 3lij_A          106 EDKRNYYLVMECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKE----------  173 (494)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS----------
T ss_pred             EeCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCC----------
Confidence            9999999999999 999999988764  699999999999999999999999999999999999996543          


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                    ....+||+|||++......  ....+||+.|+|||++. ..++.++|||||||++|+|++|..||.
T Consensus       174 --------------~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~  238 (494)
T 3lij_A          174 --------------KDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFG  238 (494)
T ss_dssp             --------------TTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             --------------CCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCC
Confidence                          2346899999988765433  23468999999999986 468999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      +.+..+.+..+......++.                                              .....+++.+.+||
T Consensus       239 ~~~~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li  272 (494)
T 3lij_A          239 GQTDQEILRKVEKGKYTFDS----------------------------------------------PEWKNVSEGAKDLI  272 (494)
T ss_dssp             CSSHHHHHHHHHHTCCCCCS----------------------------------------------GGGTTSCHHHHHHH
T ss_pred             CCCHHHHHHHHHhCCCCCCc----------------------------------------------hhcccCCHHHHHHH
Confidence            98887777666553322211                                              11234577899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCC
Q 013678          400 QGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      .+||+.||.+|||+.|+|+||||++
T Consensus       273 ~~~L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          273 KQMLQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             HHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred             HHHCCCChhhCccHHHHhcCccccc
Confidence            9999999999999999999999975

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1.2e-49  Score=393.13  Aligned_cols=280  Identities=28%  Similarity=0.476  Sum_probs=220.7

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc------
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY------  164 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~------  164 (438)
                      ..+|++.+.||+|+||.||+|++..+++.||||++.....   ...+|+.+++.++|+||     +++++++..      
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~E~~il~~l~hpni-----v~l~~~~~~~~~~~~  124 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNI-----VRLRYFFYSSGEKKD  124 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHHTCCCTTB-----CCEEEEEEEEETTTT
T ss_pred             cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHcCCCCc-----cceeeEEeccCCCCc
Confidence            4579999999999999999999999999999999865432   23469999999988877     998888742      


Q ss_pred             CCeEEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          165 RNHICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       165 ~~~~~lv~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      ...+++||||+.++|.+++..  .....+++..++.++.||+.||+|||++||+||||||+|||++.++           
T Consensus       125 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~-----------  193 (420)
T 1j1b_A          125 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT-----------  193 (420)
T ss_dssp             EEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTT-----------
T ss_pred             ceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCC-----------
Confidence            235789999997788877753  2235799999999999999999999999999999999999997532           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCC--CCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                     ..+||+|||+++....  .....+||+.|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus       194 ---------------~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~  258 (420)
T 1j1b_A          194 ---------------AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP  258 (420)
T ss_dssp             ---------------TEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ---------------CeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCC
Confidence                           2467888888765432  22345889999999999875 68999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      +.+..+++..+.+.+|.++...+.......       ....++.....              ..........++++.+||
T Consensus       259 ~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~-------~~~~~p~~~~~--------------~~~~~~~~~~~~~~~~Li  317 (420)
T 1j1b_A          259 GDSGVDQLVEIIKVLGTPTREQIREMNPNY-------TEFKFPQIKAH--------------PWTKVFRPRTPPEAIALC  317 (420)
T ss_dssp             CSSHHHHHHHHHHHHCSCCHHHHHHHCSCC-------CCCCCCCCCCC--------------CHHHHSCTTSCHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCCCHHHHHhhChhh-------hhhccCccCCC--------------CHHHhcCCCCCHHHHHHH
Confidence            999999999999999988766544322110       01111111100              000112235678999999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          400 QGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .+||++||++|||+.|+++||||++.
T Consensus       318 ~~~L~~dP~~R~t~~e~l~hp~f~~~  343 (420)
T 1j1b_A          318 SRLLEYTPTARLTPLEACAHSFFDEL  343 (420)
T ss_dssp             HHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             HHhccCChhHCCCHHHHhCCHhhccc
Confidence            99999999999999999999999753

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.2e-50  Score=384.72  Aligned_cols=281  Identities=28%  Similarity=0.497  Sum_probs=216.5

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh------hHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK------YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||++.....      ..+.+.+|+.+++.++|+||     +++++++.
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~   82 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI-----IGLLDAFG   82 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTB-----CCEEEEEC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCC-----CeEEEEEe
Confidence            35789999999999999999999999999999999864221      12457789999999988777     99999999


Q ss_pred             cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          164 YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       164 ~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      +.+..++||||+.++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++            
T Consensus        83 ~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~------------  149 (346)
T 1ua2_A           83 HKSNISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG------------  149 (346)
T ss_dssp             CTTCCEEEEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC------------
T ss_pred             eCCceEEEEEcCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCC------------
Confidence            999999999999779999987654 4689999999999999999999999999999999999997766            


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                     .+||+|||++......   .....||+.|+|||++.+. .++.++|||||||++|+|++|..||.
T Consensus       150 ---------------~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~  214 (346)
T 1ua2_A          150 ---------------VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLP  214 (346)
T ss_dssp             ---------------CEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ---------------CEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCC
Confidence                           4566666666543221   2335789999999999765 48999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccch-hhhhhccCCchhHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP-NLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l  398 (438)
                      +.+..+.+..+....+.++...+                   +.........    .....+ .........++.++.+|
T Consensus       215 ~~~~~~~~~~i~~~~~~~~~~~~-------------------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l  271 (346)
T 1ua2_A          215 GDSDLDQLTRIFETLGTPTEEQW-------------------PDMCSLPDYV----TFKSFPGIPLHHIFSAAGDDLLDL  271 (346)
T ss_dssp             CSSHHHHHHHHHHHHCCCCTTTS-------------------SSTTSSTTCC----CCCCCCCCCHHHHCTTCCHHHHHH
T ss_pred             CCCHHHHHHHHHHHcCCCChhhh-------------------hhhccCcccc----cccccCCCChHHhhccCCHHHHHH
Confidence            99998888888887776654321                   1111000000    000000 00111234567899999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          399 LQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      |.+||+.||++|||+.|+|+||||++..
T Consensus       272 i~~~L~~dP~~Rpt~~ell~h~~f~~~~  299 (346)
T 1ua2_A          272 IQGLFLFNPCARITATQALKMKYFSNRP  299 (346)
T ss_dssp             HHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             HHHHhccChhhCCCHHHHhcChhhhcCC
Confidence            9999999999999999999999998753

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=2.7e-49  Score=377.08  Aligned_cols=253  Identities=25%  Similarity=0.418  Sum_probs=211.3

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      .|...++||+|+||.||+|++..+|+.||||++.... ...+.+.+|+.+++.++|+||     +++++++...+..++|
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~lv  120 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV-----VEMYKSYLVGEELWVL  120 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTB-----CCEEEEEEETTEEEEE
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCc-----ceEEEEEEECCEEEEE
Confidence            4788899999999999999999999999999997533 345668899999999988777     9999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||+ +++|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||++.++                   
T Consensus       121 ~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-------------------  178 (321)
T 2c30_A          121 MEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG-------------------  178 (321)
T ss_dssp             ECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-------------------
T ss_pred             EecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC-------------------
Confidence            9999 99999998753   599999999999999999999999999999999999997655                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL  327 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~  327 (438)
                              .+||+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+..
T Consensus       179 --------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~  250 (321)
T 2c30_A          179 --------RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM  250 (321)
T ss_dssp             --------CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             --------cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                    4677777766544322   23357999999999999989999999999999999999999999887766655


Q ss_pred             HHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCC
Q 013678          328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  407 (438)
Q Consensus       328 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  407 (438)
                      ..+.....+.                                               ......+++.+.+||.+||+.||
T Consensus       251 ~~~~~~~~~~-----------------------------------------------~~~~~~~~~~l~~li~~~l~~dp  283 (321)
T 2c30_A          251 KRLRDSPPPK-----------------------------------------------LKNSHKVSPVLRDFLERMLVRDP  283 (321)
T ss_dssp             HHHHHSSCCC-----------------------------------------------CTTGGGSCHHHHHHHHHHSCSST
T ss_pred             HHHhcCCCCC-----------------------------------------------cCccccCCHHHHHHHHHHccCCh
Confidence            4443211000                                               00112346789999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCCCC
Q 013678          408 AERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       408 ~~Rpta~ell~hp~f~~~~~  427 (438)
                      ++|||+.|+++||||.+...
T Consensus       284 ~~Rps~~ell~hp~~~~~~~  303 (321)
T 2c30_A          284 QERATAQELLDHPFLLQTGL  303 (321)
T ss_dssp             TTSCCHHHHHTSGGGGGCCC
T ss_pred             hhCcCHHHHhcChhhccCCC
Confidence            99999999999999987643

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=2.1e-49  Score=388.29  Aligned_cols=282  Identities=30%  Similarity=0.506  Sum_probs=220.3

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc--
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--  164 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--  164 (438)
                      ++....+|++.+.||+|+||.||+|++..+++ ||+|++.....   ...+|+.+++.++|+||     +++++++..  
T Consensus        35 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~---~~~~E~~il~~l~h~ni-----v~l~~~~~~~~  105 (394)
T 4e7w_A           35 GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR---FKNRELQIMRIVKHPNV-----VDLKAFFYSNG  105 (394)
T ss_dssp             CCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT---SCCHHHHHHHTCCCTTB-----CCEEEEEEEES
T ss_pred             CCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc---hHHHHHHHHHhCCCCCc-----ceEEEEEEecC
Confidence            45566789999999999999999999987776 88888754332   22369999999988877     999998853  


Q ss_pred             ----CCeEEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe-cCcccccCC
Q 013678          165 ----RNHICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV-SAEYVKVPD  237 (438)
Q Consensus       165 ----~~~~~lv~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~-~~~~~kl~d  237 (438)
                          ...+++||||+.+++.+.+..  .....+++..++.++.||+.||+|||++||+||||||+|||++ .++      
T Consensus       106 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~------  179 (394)
T 4e7w_A          106 DKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSG------  179 (394)
T ss_dssp             SSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTT------
T ss_pred             CCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCC------
Confidence                335899999997777665542  1234799999999999999999999999999999999999997 444      


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC--CCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhC
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg  314 (438)
                                           .+||+|||++.....  ......||+.|+|||++.+. .++.++|||||||++|+|++|
T Consensus       180 ---------------------~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g  238 (394)
T 4e7w_A          180 ---------------------VLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQG  238 (394)
T ss_dssp             ---------------------EEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS
T ss_pred             ---------------------cEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhC
Confidence                                 577777887765422  23345889999999999876 489999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      +.||.+.+..+++..+.+.+|.++...+........   .    ..++....              ...........+++
T Consensus       239 ~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~---~----~~~~~~~~--------------~~~~~~~~~~~~~~  297 (394)
T 4e7w_A          239 QPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYM---E----HKFPQIRP--------------HPFSKVFRPRTPPD  297 (394)
T ss_dssp             SCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGS---S----SCCCCCCC--------------CCHHHHSCTTCCHH
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhh---h----hccccccC--------------CcHHHhccccCCHH
Confidence            999999999999999999999988766544322110   0    01111000              00111123346789


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          395 LIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      +.+||.+||++||++|||+.|+++||||++-
T Consensus       298 ~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (394)
T 4e7w_A          298 AIDLISRLLEYTPSARLTAIEALCHPFFDEL  328 (394)
T ss_dssp             HHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred             HHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence            9999999999999999999999999999864

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=4.8e-49  Score=381.72  Aligned_cols=286  Identities=25%  Similarity=0.428  Sum_probs=220.0

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch------------hhHHHHHHHHHHHHHHHhcCCCCcce
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------------KYREAAMIEIDVLQRLARHDIGGTRC  155 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~E~~~l~~l~~~~i~~~~i  155 (438)
                      ..+.++|++.+.||+|+||.||+|.+.. ++.||||++....            ...+.+.+|+.+++.++|+||     
T Consensus        18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----   91 (362)
T 3pg1_A           18 HAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI-----   91 (362)
T ss_dssp             HHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB-----
T ss_pred             HHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc-----
Confidence            4567899999999999999999999855 8899999985421            123678899999999988877     


Q ss_pred             EEecceec-----cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecC
Q 013678          156 VQIRNWFD-----YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  230 (438)
Q Consensus       156 v~~~~~~~-----~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~  230 (438)
                      +++++++.     ....+|+||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~  170 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN  170 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             cceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCC
Confidence            99999883     445899999999889999987543 469999999999999999999999999999999999999765


Q ss_pred             cccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhC-CCCCcchhHHHHHHH
Q 013678          231 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCI  307 (438)
Q Consensus       231 ~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~i  307 (438)
                      +                           .+||+|||++......  .....||+.|+|||++.+ ..++.++|||||||+
T Consensus       171 ~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  223 (362)
T 3pg1_A          171 N---------------------------DITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCV  223 (362)
T ss_dssp             C---------------------------CEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHH
T ss_pred             C---------------------------CEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHH
Confidence            5                           5777777777643322  233578999999999987 568999999999999


Q ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhh-hhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhh
Q 013678          308 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRR-AEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ  386 (438)
Q Consensus       308 l~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (438)
                      +|+|++|..||.+.+..+.+..+....+.++.......... ...++... ....+.                  .....
T Consensus       224 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------------~~~~~  284 (362)
T 3pg1_A          224 MAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNS-LSNVPA------------------RAWTA  284 (362)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTC-CCCCCC------------------CCHHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhh-cccCCh------------------hhHHh
Confidence            99999999999999999999999998888776543322111 11111110 000000                  01112


Q ss_pred             ccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       387 ~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      .....++.+.+||.+||+.||++|||+.|+|+||||++..
T Consensus       285 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          285 VVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF  324 (362)
T ss_dssp             HSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             hCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence            3345678899999999999999999999999999999753

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=1.8e-49  Score=401.34  Aligned_cols=253  Identities=26%  Similarity=0.423  Sum_probs=212.1

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ..++|++.+.||+|+||.||+|++..+|+.||||++.+..    .....+.+|+.+|+.++|++|     +++++++.+.
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~I-----v~l~~~~~~~  256 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFV-----VSLAYAYETK  256 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTB-----CCEEEEEECS
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCE-----eeEEEEEeeC
Confidence            4578999999999999999999999999999999997532    234567889999999988877     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+||||||+ |++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.+|             
T Consensus       257 ~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g-------------  323 (576)
T 2acx_A          257 DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHG-------------  323 (576)
T ss_dssp             SEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS-------------
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCC-------------
Confidence            9999999999 99999999876655699999999999999999999999999999999999997665             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                    .+||+|||++.......  ...+||+.|+|||++.+..++.++|||||||++|||++|..||.+..
T Consensus       324 --------------~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~  389 (576)
T 2acx_A          324 --------------HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK  389 (576)
T ss_dssp             --------------CEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSS
T ss_pred             --------------CeEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence                          56777777776543322  33589999999999999889999999999999999999999998754


Q ss_pred             h----HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          323 N----LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       323 ~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      .    ......+....                                                  ...+..+++++.+|
T Consensus       390 ~~~~~~~i~~~i~~~~--------------------------------------------------~~~p~~~s~~~~dL  419 (576)
T 2acx_A          390 KKIKREEVERLVKEVP--------------------------------------------------EEYSERFSPQARSL  419 (576)
T ss_dssp             SCCCHHHHHHHHHHCC--------------------------------------------------CCCCTTSCHHHHHH
T ss_pred             cchhHHHHHHHhhccc--------------------------------------------------ccCCccCCHHHHHH
Confidence            2    11111111110                                                  01123467899999


Q ss_pred             HHHccccCCCCCC-----CHHHHhcCCCCCC
Q 013678          399 LQGLLRYDPAERL-----KAREALRHPFFTR  424 (438)
Q Consensus       399 l~~~L~~dP~~Rp-----ta~ell~hp~f~~  424 (438)
                      |.+||+.||++||     +++|+++||||++
T Consensus       420 I~~lL~~dP~~R~g~~~~sa~eil~HpfF~~  450 (576)
T 2acx_A          420 CSQLLCKDPAERLGCRGGSAREVKEHPLFKK  450 (576)
T ss_dssp             HHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred             HHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence            9999999999999     8999999999987

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=2.9e-49  Score=379.16  Aligned_cols=257  Identities=28%  Similarity=0.400  Sum_probs=216.8

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      .....++|++.+.||+|+||.||+|.+..+++.||+|++...    ....+.+.+|+.+++.+.|+||     +++++++
T Consensus        36 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~  110 (335)
T 2owb_A           36 DPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHV-----VGFHGFF  110 (335)
T ss_dssp             ETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEE
T ss_pred             CcccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEE
Confidence            445568999999999999999999999999999999998753    2345678889999999988777     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      .+.+.+|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++          
T Consensus       111 ~~~~~~~lv~e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~----------  178 (335)
T 2owb_A          111 EDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL----------  178 (335)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC----------
T ss_pred             ecCCeEEEEEecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCC----------
Confidence            9999999999999 899999988754  799999999999999999999999999999999999997655          


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                       .+||+|||++.....   ......||..|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       179 -----------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  241 (335)
T 2owb_A          179 -----------------EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF  241 (335)
T ss_dssp             -----------------CEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             -----------------CEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCC
Confidence                             467777777655432   223357899999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      ......+....+......                                                  ....++..+.+|
T Consensus       242 ~~~~~~~~~~~~~~~~~~--------------------------------------------------~~~~~~~~~~~l  271 (335)
T 2owb_A          242 ETSCLKETYLRIKKNEYS--------------------------------------------------IPKHINPVAASL  271 (335)
T ss_dssp             CCSSHHHHHHHHHHTCCC--------------------------------------------------CCTTSCHHHHHH
T ss_pred             CCCCHHHHHHHHhcCCCC--------------------------------------------------CCccCCHHHHHH
Confidence            887665554444322111                                                  112456789999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          399 LQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      |.+||+.||++|||+.|+++||||++...
T Consensus       272 i~~~l~~dp~~Rps~~ell~~~~~~~~~~  300 (335)
T 2owb_A          272 IQKMLQTDPTARPTINELLNDEFFTSGYI  300 (335)
T ss_dssp             HHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             HHHHccCChhHCcCHHHHhcCccccCCCc
Confidence            99999999999999999999999987654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=2.3e-49  Score=379.26  Aligned_cols=283  Identities=28%  Similarity=0.461  Sum_probs=222.7

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ..++|++++.||+|+||.||+|++..+++.||||++....   ...+.+.+|+.+++.++|+||     +++++++.+.+
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~   97 (331)
T 4aaa_A           23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENL-----VNLLEVCKKKK   97 (331)
T ss_dssp             CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEEETT
T ss_pred             hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCE-----eeEEEEeecCC
Confidence            3478999999999999999999999999999999986432   334567789999999988877     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ..|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++              
T Consensus        98 ~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~--------------  161 (331)
T 4aaa_A           98 RWYLVFEFVDHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSG--------------  161 (331)
T ss_dssp             EEEEEEECCSEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--------------
T ss_pred             EEEEEEecCCcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCC--------------
Confidence            999999999 777777665443  699999999999999999999999999999999999997655              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                   .+||+|||++......   .....||..|+|||++.+. .++.++|||||||++|+|++|..||.+.
T Consensus       162 -------------~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  228 (331)
T 4aaa_A          162 -------------VVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD  228 (331)
T ss_dssp             -------------CEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             -------------cEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                         5777777777554322   2335789999999999876 6899999999999999999999999999


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +..+.+..+....+..++...........  +.   ....+.....              .........+++.+.+||.+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~--------------~~~~~~~~~~~~~l~~li~~  289 (331)
T 4aaa_A          229 SDIDQLYHIMMCLGNLIPRHQELFNKNPV--FA---GVRLPEIKER--------------EPLERRYPKLSEVVIDLAKK  289 (331)
T ss_dssp             SHHHHHHHHHHHHCSCCHHHHHHHHHCGG--GT---TCCCCCCSSC--------------CCHHHHSTTSCHHHHHHHHH
T ss_pred             CcHHHHHHHHHHhCCCChhhhhHhhhccc--cc---cccCcccccc--------------chhhhcccchhHHHHHHHHH
Confidence            99999988888888877654332221110  00   0011111000              11112234567899999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCC
Q 013678          402 LLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      ||+.||++|||+.|+|+||||+..
T Consensus       290 ~L~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          290 CLHIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             HTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred             HhccCcccCCCHHHHhcCchhccC
Confidence            999999999999999999999865

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=2.8e-49  Score=383.02  Aligned_cols=287  Identities=30%  Similarity=0.459  Sum_probs=217.1

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC----
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN----  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~----  166 (438)
                      .++|++.+.||+|+||.||+|++..+++.||||++...........+|+..+..++|+||     +++++++...+    
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~ni-----v~~~~~~~~~~~~~~   96 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNI-----VQLQSYFYTLGERDR   96 (360)
T ss_dssp             HTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTB-----CCEEEEEEEECSSCT
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCc-----ccHHHhhhccccccc
Confidence            478999999999999999999999999999999987665555667788888888888877     99999885432    


Q ss_pred             ---eEEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHH--hCCceecCCCCCcEEEec-CcccccCCc
Q 013678          167 ---HICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMH--ELRLIHTDLKPENILLVS-AEYVKVPDY  238 (438)
Q Consensus       167 ---~~~lv~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH--~~~ivHrDlkp~NIli~~-~~~~kl~df  238 (438)
                         .+++||||+.++|.+.+..  .....+++..++.++.||+.||.|||  ++||+||||||+|||++. ++       
T Consensus        97 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~-------  169 (360)
T 3e3p_A           97 RDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADG-------  169 (360)
T ss_dssp             TCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTT-------
T ss_pred             cceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCC-------
Confidence               4899999997787766653  23357899999999999999999999  999999999999999975 44       


Q ss_pred             cccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHhCC
Q 013678          239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       239 ~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~  315 (438)
                                          .+||+|||++.......  ....||+.|+|||++.+.. ++.++|||||||++|+|++|.
T Consensus       170 --------------------~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~  229 (360)
T 3e3p_A          170 --------------------TLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE  229 (360)
T ss_dssp             --------------------EEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             --------------------cEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence                                57777777776544332  3357899999999997765 899999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      .||.+.+....+..+.+..+.++..++..........       .+.....           ..............++++
T Consensus       230 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-----------~~~~~~~~~~~~~~~~~~  291 (360)
T 3e3p_A          230 PIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDV-------DLYNSKG-----------IPWSNVFSDHSLKDAKEA  291 (360)
T ss_dssp             CSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCG-------GGGCCCC-----------CCHHHHTTTCCCTTHHHH
T ss_pred             CCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhc-------ccccccc-----------CCcccccchhhccccHHH
Confidence            9999999999999999999998887765443211110       0000000           001111222333467899


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          396 IDLLQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      .+||.+||+.||.+|||+.|+|+||||++...
T Consensus       292 ~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  323 (360)
T 3e3p_A          292 YDLLSALLQYLPEERMKPYEALCHPYFDELHD  323 (360)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred             HHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence            99999999999999999999999999987543

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=1e-49  Score=392.29  Aligned_cols=293  Identities=24%  Similarity=0.450  Sum_probs=211.8

Q ss_pred             CCccCCceEEE-eeeeeecceEEEEEEEC--CCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEeccee-
Q 013678           87 GENLTPRCKIL-SKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF-  162 (438)
Q Consensus        87 ~~~~~~~y~~~-~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~-  162 (438)
                      .+.+.+.|++. ++||+|+||.||+|++.  .+++.||||++.... ....+.+|+.+|+.++|+||     +++++++ 
T Consensus        15 ~~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l~hpni-----v~~~~~~~   88 (405)
T 3rgf_A           15 RERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLRELKHPNV-----ISLQKVFL   88 (405)
T ss_dssp             CCCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-CCHHHHHHHHHHHHCCCTTB-----CCCCEEEE
T ss_pred             hhhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-CCHHHHHHHHHHHhcCCCCe-----eeEeeEEe
Confidence            34566778884 47999999999999965  568899999997532 33567899999999988877     9999998 


Q ss_pred             -ccCCeEEEEEccCCCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 013678          163 -DYRNHICIVFEKLGPSLYDFLRKNS-------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  234 (438)
Q Consensus       163 -~~~~~~~lv~e~~~~~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  234 (438)
                       .....+||||||++++|.+++....       ...+++..++.++.||+.||+|||++||+||||||+|||+...+   
T Consensus        89 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~---  165 (405)
T 3rgf_A           89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG---  165 (405)
T ss_dssp             ETTTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSS---
T ss_pred             cCCCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCC---
Confidence             4577999999999889999886321       12499999999999999999999999999999999999995432   


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC------CcccccCCCcchhHHHhCC-CCCcchhHHHHHHH
Q 013678          235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCI  307 (438)
Q Consensus       235 l~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~i  307 (438)
                                          +....+||+|||++......      ....+||+.|+|||++.+. .++.++|||||||+
T Consensus       166 --------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~i  225 (405)
T 3rgf_A          166 --------------------PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI  225 (405)
T ss_dssp             --------------------TTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHH
T ss_pred             --------------------CCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHH
Confidence                                23457889999988765432      2335889999999999885 48999999999999


Q ss_pred             HHHHHhCCCCCCCCCh---------HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHh-
Q 013678          308 LVELCSGEALFQTHEN---------LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL-  377 (438)
Q Consensus       308 l~elltg~~pf~~~~~---------~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  377 (438)
                      +|+|++|..||.+...         .+++..+...+|.++...+......                   .......... 
T Consensus       226 l~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~-------------------~~~~~~~~~~~  286 (405)
T 3rgf_A          226 FAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKM-------------------PEHSTLMKDFR  286 (405)
T ss_dssp             HHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGS-------------------TTHHHHHHHCC
T ss_pred             HHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcC-------------------cchhhhhhhcc
Confidence            9999999999976554         4778888888887765432221110                   0000000000 


Q ss_pred             ------ccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          378 ------LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       378 ------~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                            ..............+..+.+||.+||++||++|||++|+|+||||++...
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~  342 (405)
T 3rgf_A          287 RNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPL  342 (405)
T ss_dssp             GGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSC
T ss_pred             ccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCC
Confidence                  00111111222334678999999999999999999999999999987643

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=1.7e-49  Score=371.42  Aligned_cols=263  Identities=26%  Similarity=0.454  Sum_probs=218.6

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-------hhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      +.++|++.+.||+|+||.||+|++..+++.||+|+++...       ...+.+.+|+.+++.+.|+|+     +++++++
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~   77 (283)
T 3bhy_A            3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI-----ITLHDIF   77 (283)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTB-----CCEEEEE
T ss_pred             hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCe-----eehhhee
Confidence            4578999999999999999999999999999999987532       135778899999999988777     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      .+.+..++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+||+++.++          
T Consensus        78 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~----------  145 (283)
T 3bhy_A           78 ENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKN----------  145 (283)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS----------
T ss_pred             cCCCeEEEEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCC----------
Confidence            9999999999999 899999998754  699999999999999999999999999999999999997654          


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                   .....++|+|||.+.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       146 -------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  212 (283)
T 3bhy_A          146 -------------VPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL  212 (283)
T ss_dssp             -------------SSSCCEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             -------------CCCCceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCC
Confidence                         123468899999887654322  33578999999999999899999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      +.+..+....+.......+.                                              ......+..+.+||
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li  246 (283)
T 3bhy_A          213 GETKQETLTNISAVNYDFDE----------------------------------------------EYFSNTSELAKDFI  246 (283)
T ss_dssp             CSSHHHHHHHHHTTCCCCCH----------------------------------------------HHHTTCCHHHHHHH
T ss_pred             CcchHHHHHHhHhcccCCcc----------------------------------------------hhcccCCHHHHHHH
Confidence            87776665555432222211                                              11234567899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          400 QGLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      .+||+.||++|||+.|+++||||+.-.++
T Consensus       247 ~~~l~~dp~~Rps~~~~l~h~~~~~~~~~  275 (283)
T 3bhy_A          247 RRLLVKDPKRRMTIAQSLEHSWIKAIRRR  275 (283)
T ss_dssp             HTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred             HHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence            99999999999999999999999864433

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=1.5e-48  Score=376.91  Aligned_cols=286  Identities=29%  Similarity=0.445  Sum_probs=221.2

Q ss_pred             cCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           86 IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      ++..+.++|++.+.||+|+||.||+|.+..+|+.||||++...  ......+.+|+.+++.++|+||     +++++++.
T Consensus         5 ~~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~   79 (353)
T 2b9h_A            5 IVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI-----ITIFNIQR   79 (353)
T ss_dssp             CCCCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTB-----CCEEEECC
T ss_pred             cccccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCc-----CCeeeeec
Confidence            3456778999999999999999999999999999999999643  2345667899999999988877     88888765


Q ss_pred             cC-----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCc
Q 013678          164 YR-----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  238 (438)
Q Consensus       164 ~~-----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df  238 (438)
                      ..     ...|+||||++++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++.+     
T Consensus        80 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~-----  151 (353)
T 2b9h_A           80 PDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDL-----  151 (353)
T ss_dssp             CSCSTTCCCEEEEECCCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCE-----
T ss_pred             ccccCccceEEEEEeccCccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcE-----
Confidence            43     689999999988999999874   59999999999999999999999999999999999999776654     


Q ss_pred             cccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-------------CcccccCCCcchhHHHhC-CCCCcchhHHHH
Q 013678          239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-------------HSYVVSTRHYRAPEVILG-LGWNYPCDLWSV  304 (438)
Q Consensus       239 ~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSl  304 (438)
                                            ||+|||++......             .....||+.|+|||++.+ ..++.++|||||
T Consensus       152 ----------------------kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~sl  209 (353)
T 2b9h_A          152 ----------------------KVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSC  209 (353)
T ss_dssp             ----------------------EECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHH
T ss_pred             ----------------------EEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHH
Confidence                                  55555554432211             122478999999999876 578999999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHh-ccch-h
Q 013678          305 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL-LRLP-N  382 (438)
Q Consensus       305 G~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~  382 (438)
                      ||++|+|++|..||.+.+..+.+..+....+.++......                   .... ......... ...+ .
T Consensus       210 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~-~~~~~~~~~~~~~~~~  269 (353)
T 2b9h_A          210 GCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR-------------------CIES-PRAREYIKSLPMYPAA  269 (353)
T ss_dssp             HHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTT-------------------TCCC-HHHHHHHHTSCCCCCC
T ss_pred             HHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhcccc-------------------cccc-chhhHHhhcccCCCCc
Confidence            9999999999999999998888888888777654211000                   0000 000111100 0000 1


Q ss_pred             hhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       383 ~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      ........+++++.+||.+||+.||++|||+.|+|+||||+...
T Consensus       270 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (353)
T 2b9h_A          270 PLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH  313 (353)
T ss_dssp             CHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             chhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence            11122346788999999999999999999999999999998753

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=1.3e-48  Score=373.12  Aligned_cols=286  Identities=30%  Similarity=0.509  Sum_probs=222.9

Q ss_pred             cCCceEEEeeeeeecceEEEEEEEC-CCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceec--
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDN-EKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD--  163 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~--  163 (438)
                      ..++|++.+.||+|+||.||+|++. .+++.||+|+++...   .....+.+|+.+++.+...  .|+|++++++++.  
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~h~~i~~~~~~~~~~   86 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF--EHPNVVRLFDVCTVS   86 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHT--CCTTBCCEEEEEEEE
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhcc--CCCCeEeeeeeeeec
Confidence            4578999999999999999999995 678999999986432   2234567888888888421  2344499999886  


Q ss_pred             ---cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          164 ---YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       164 ---~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                         .....++||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.++         
T Consensus        87 ~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~---------  157 (326)
T 1blx_A           87 RTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG---------  157 (326)
T ss_dssp             ECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC---------
T ss_pred             ccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCC---------
Confidence               56789999999988999999887655699999999999999999999999999999999999997655         


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                        .+||+|||++......  .....||..|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       158 ------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  219 (326)
T 1blx_A          158 ------------------QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF  219 (326)
T ss_dssp             ------------------CEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ------------------CEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence                              5677777776654322  22357899999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      .+.+..+.+..+....+.++...                   |+.........   .. .............++..+.+|
T Consensus       220 ~~~~~~~~~~~i~~~~~~~~~~~-------------------~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~l  276 (326)
T 1blx_A          220 RGSSDVDQLGKILDVIGLPGEED-------------------WPRDVALPRQA---FH-SKSAQPIEKFVTDIDELGKDL  276 (326)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCGGG-------------------SCTTCSSCGGG---SC-CCCCCCGGGTCCSCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHHcCCCCccc-------------------Cccccccchhh---hc-ccCcchhhhccccCCHHHHHH
Confidence            99998888888887777655322                   11111000000   00 000011122335678899999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          399 LQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      |.+||+.||++|||+.|+++||||++...
T Consensus       277 i~~~L~~dP~~Rpt~~e~l~hp~~~~~~~  305 (326)
T 1blx_A          277 LLKCLTFNPAKRISAYSALSHPYFQDLER  305 (326)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             HHHHcCCCcccCCCHHHHhcCccccccch
Confidence            99999999999999999999999987543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=3.6e-49  Score=380.08  Aligned_cols=257  Identities=25%  Similarity=0.354  Sum_probs=213.2

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      ....+|++++.||+|+||.||+|++..+++.||||++...    ....+.+.+|+.+++.++|+||     +++++++..
T Consensus        51 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~  125 (348)
T 1u5q_A           51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT-----IQYRGCYLR  125 (348)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEEE
T ss_pred             chhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEE
Confidence            4456799999999999999999999999999999998643    2334568899999999988877     999999999


Q ss_pred             CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          165 RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       165 ~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      ++..+|||||+.|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++             
T Consensus       126 ~~~~~lv~e~~~g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-------------  191 (348)
T 1u5q_A          126 EHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG-------------  191 (348)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT-------------
T ss_pred             CCeEEEEEecCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC-------------
Confidence            99999999999889999886543 4799999999999999999999999999999999999998766             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHh---CCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                    .+||+|||++...... ....||+.|+|||++.   +..++.++|||||||++|||++|..||.+.
T Consensus       192 --------------~~kL~DfG~a~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~  256 (348)
T 1u5q_A          192 --------------LVKLGDFGSASIMAPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM  256 (348)
T ss_dssp             --------------EEEECCCTTCBSSSSB-CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             --------------CEEEeeccCceecCCC-CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                          4677777776554332 3357999999999996   456899999999999999999999999887


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +....+..+....  .|.                                              .....+++.+.+||.+
T Consensus       257 ~~~~~~~~~~~~~--~~~----------------------------------------------~~~~~~~~~l~~li~~  288 (348)
T 1u5q_A          257 NAMSALYHIAQNE--SPA----------------------------------------------LQSGHWSEYFRNFVDS  288 (348)
T ss_dssp             CHHHHHHHHHHSC--CCC----------------------------------------------CCCTTSCHHHHHHHHH
T ss_pred             ChHHHHHHHHhcC--CCC----------------------------------------------CCCCCCCHHHHHHHHH
Confidence            7666554443211  000                                              0112456789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          402 LLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      ||+.||++|||++++++||||.....
T Consensus       289 ~l~~dP~~Rps~~~ll~h~~~~~~~~  314 (348)
T 1u5q_A          289 CLQKIPQDRPTSEVLLKHRFVLRERP  314 (348)
T ss_dssp             HTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred             HcccChhhCcCHHHHhhChhhhccCC
Confidence            99999999999999999999987643

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1.7e-48  Score=378.08  Aligned_cols=257  Identities=29%  Similarity=0.498  Sum_probs=213.3

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---------hhHHHHHHHHHHHHHH-HhcCCCCcceEE
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRL-ARHDIGGTRCVQ  157 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l-~~~~i~~~~iv~  157 (438)
                      ..+.++|++.+.||+|+||.||+|.+..+|+.||||+++...         ...+.+.+|+.++..+ .|+||     ++
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i-----v~  164 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHI-----IT  164 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTB-----CC
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCE-----eE
Confidence            345678999999999999999999999999999999986432         2245677899999999 67776     99


Q ss_pred             ecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccC
Q 013678          158 IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  236 (438)
Q Consensus       158 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~  236 (438)
                      +++++...+..|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.+|     
T Consensus       165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~-----  237 (365)
T 2y7j_A          165 LIDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNM-----  237 (365)
T ss_dssp             EEEEEEBSSEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----
T ss_pred             EEEEEeeCCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC-----
Confidence            999999999999999999 899999998754  699999999999999999999999999999999999997655     


Q ss_pred             CccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCC------CCCcchhHHHHHHHH
Q 013678          237 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGL------GWNYPCDLWSVGCIL  308 (438)
Q Consensus       237 df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il  308 (438)
                                            .++|+|||++......  .....||+.|+|||++.+.      .++.++|||||||++
T Consensus       238 ----------------------~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il  295 (365)
T 2y7j_A          238 ----------------------QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL  295 (365)
T ss_dssp             ----------------------CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHH
T ss_pred             ----------------------CEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHH
Confidence                                  5677777766554332  2335899999999998743      578999999999999


Q ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhcc
Q 013678          309 VELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  388 (438)
Q Consensus       309 ~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (438)
                      |+|++|..||...+.......+......++.                                              ...
T Consensus       296 ~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~----------------------------------------------~~~  329 (365)
T 2y7j_A          296 FTLLAGSPPFWHRRQILMLRMIMEGQYQFSS----------------------------------------------PEW  329 (365)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHTCCCCCH----------------------------------------------HHH
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC----------------------------------------------ccc
Confidence            9999999999887766665555432221111                                              111


Q ss_pred             CCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       389 ~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      ...+..+.+||.+||+.||++|||+.|+|+||||++
T Consensus       330 ~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          330 DDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             SSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            345678999999999999999999999999999974

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=4.1e-49  Score=380.88  Aligned_cols=281  Identities=27%  Similarity=0.481  Sum_probs=223.0

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+.++|.+.+.||+|+||.||+|.+..+|+.||||++...   ....+.+.+|+.+++.++|+||     +++++++...
T Consensus        21 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~   95 (353)
T 3coi_A           21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV-----IGLLDVFTPA   95 (353)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTB-----CCCSEEECSC
T ss_pred             ccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCc-----ccHhheEecc
Confidence            3568999999999999999999999999999999999652   2335677899999999988877     9999998876


Q ss_pred             Ce------EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          166 NH------ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       166 ~~------~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                      +.      +|+||||+.++|.+++..    .+++..++.++.||+.||+|||++||+||||||+|||++.++        
T Consensus        96 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~--------  163 (353)
T 3coi_A           96 SSLRNFYDFYLVMPFMQTDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC--------  163 (353)
T ss_dssp             SSGGGCCCCEEEEECCSEEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTC--------
T ss_pred             cccccceeEEEEeccccCCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCC--------
Confidence            53      599999998888877642    599999999999999999999999999999999999997654        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                         .+||+|||++...........||+.|+|||++.+ ..++.++|||||||++|+|++|..||
T Consensus       164 -------------------~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf  224 (353)
T 3coi_A          164 -------------------ELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF  224 (353)
T ss_dssp             -------------------CEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             -------------------cEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                               5778888887766555555689999999999987 57899999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhh-hhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAE-KYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      .+.+..+.+..+.+..|.++..+......... .+.......                    ...........+++++.+
T Consensus       225 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~  284 (353)
T 3coi_A          225 KGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT--------------------PRKDFTQLFPRASPQAAD  284 (353)
T ss_dssp             BSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBC--------------------SSCCTTTTCTTSCHHHHH
T ss_pred             CCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCC--------------------CCccHHHhcCCcCHHHHH
Confidence            99999999999999988888766543221111 011000000                    000011223456789999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          398 LLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      ||.+||+.||++|||+.|+|+||||+..
T Consensus       285 li~~~L~~dp~~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          285 LLEKMLELDVDKRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             HHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence            9999999999999999999999999864

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=5.9e-49  Score=396.68  Aligned_cols=252  Identities=23%  Similarity=0.362  Sum_probs=209.9

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      .++|++.+.||+|+||.||+|+++.+|+.||||++.+..    ...+.+.+|+.+++.++|++|     +++++++.+.+
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~I-----v~l~~~~~~~~  258 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI-----VSLAYAFETKT  258 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTB-----CCEEEEEECSS
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCE-----eeEEEEEeeCC
Confidence            478999999999999999999999999999999997532    234667889999999988777     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          167 HICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      .+|+||||+ |++|.+++....  ...+++..++.++.||+.||+|||++||+||||||+|||++.+|            
T Consensus       259 ~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g------------  326 (543)
T 3c4z_A          259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG------------  326 (543)
T ss_dssp             EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS------------
T ss_pred             EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCC------------
Confidence            999999999 999999997643  34699999999999999999999999999999999999997666            


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                     .+||+|||++.......   ...+||+.|+|||++.+..++.++|||||||++|||++|..||.+
T Consensus       327 ---------------~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~  391 (543)
T 3c4z_A          327 ---------------NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA  391 (543)
T ss_dssp             ---------------CEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ---------------CEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCC
Confidence                           46677777765543222   235899999999999999999999999999999999999999977


Q ss_pred             CCh----HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          321 HEN----LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       321 ~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      .+.    ......+....                                                  ...+..++.++.
T Consensus       392 ~~~~~~~~~~~~~i~~~~--------------------------------------------------~~~p~~~s~~~~  421 (543)
T 3c4z_A          392 RGEKVENKELKQRVLEQA--------------------------------------------------VTYPDKFSPASK  421 (543)
T ss_dssp             TTCCCCHHHHHHHHHHCC--------------------------------------------------CCCCTTSCHHHH
T ss_pred             CccchhHHHHHHHHhhcc--------------------------------------------------cCCCcccCHHHH
Confidence            532    22222222110                                                  011235577999


Q ss_pred             HHHHHccccCCCCCCC-----HHHHhcCCCCCC
Q 013678          397 DLLQGLLRYDPAERLK-----AREALRHPFFTR  424 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpt-----a~ell~hp~f~~  424 (438)
                      +||.+||+.||++||+     ++++++||||++
T Consensus       422 ~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~  454 (543)
T 3c4z_A          422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD  454 (543)
T ss_dssp             HHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred             HHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence            9999999999999996     589999999987

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.2e-49  Score=383.39  Aligned_cols=262  Identities=26%  Similarity=0.394  Sum_probs=213.4

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc------hhhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++...      ....+.+.+|+.+++.++|+||     +++++++
T Consensus        23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~   97 (345)
T 3hko_A           23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNI-----ARLYEVY   97 (345)
T ss_dssp             HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTB-----CCEEEEE
T ss_pred             hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCc-----ceeehhh
Confidence            4668999999999999999999999999999999998753      2345678899999999988777     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC--------------------------------------CCCCCHHHHHHHHHHH
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNS--------------------------------------YRSFPIDLVRELGRQL  203 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~--------------------------------------~~~l~~~~~~~i~~qi  203 (438)
                      .+.+..|+||||| +++|.+++....                                      ...+++..++.++.||
T Consensus        98 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  177 (345)
T 3hko_A           98 EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI  177 (345)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred             ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence            9999999999999 999999985210                                      1124677889999999


Q ss_pred             HHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC-------CCc
Q 013678          204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-------DHS  276 (438)
Q Consensus       204 ~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~  276 (438)
                      +.||+|||++||+||||||+|||++.++                         ...+||+|||++.....       ...
T Consensus       178 ~~~l~~LH~~~ivH~Dlkp~NIll~~~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~  232 (345)
T 3hko_A          178 FSALHYLHNQGICHRDIKPENFLFSTNK-------------------------SFEIKLVDFGLSKEFYKLNNGEYYGMT  232 (345)
T ss_dssp             HHHHHHHHHTTEECCCCCGGGEEESCSS-------------------------SCCEEECCCTTCEEGGGTTCC------
T ss_pred             HHHHHHHHHCCccccCCChhhEEEecCC-------------------------CceEEEeeccccccccccCcccccccc
Confidence            9999999999999999999999996543                         23578888888865322       123


Q ss_pred             ccccCCCcchhHHHhC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhc
Q 013678          277 YVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFR  354 (438)
Q Consensus       277 ~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~  354 (438)
                      ...||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+....+......++                
T Consensus       233 ~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------------  296 (345)
T 3hko_A          233 TKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFE----------------  296 (345)
T ss_dssp             --CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTT----------------
T ss_pred             ccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccC----------------
Confidence            4579999999999976  5689999999999999999999999998887776655544221111                


Q ss_pred             CCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          355 RGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                                                    ......+++++.+||.+||+.||.+|||+.|+|+||||++..
T Consensus       297 ------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          297 ------------------------------NPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             ------------------------------SGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             ------------------------------CcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence                                          011123567899999999999999999999999999998754

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=3.3e-49  Score=373.61  Aligned_cols=263  Identities=25%  Similarity=0.413  Sum_probs=217.8

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh-hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ..+.++|++.+.||+|+||.||+|++..+|+.||+|+++.... ..+.+.+|+.+++.++|+||     +++++++.+.+
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   79 (304)
T 2jam_A            5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENI-----VTLEDIYESTT   79 (304)
T ss_dssp             -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTB-----CCEEEEEECSS
T ss_pred             cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCe-----eehhhhcccCC
Confidence            3566899999999999999999999999999999999975432 34567899999999988877     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ..|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+||++...               
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~---------------  142 (304)
T 2jam_A           80 HYYLVMQLVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTP---------------  142 (304)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSS---------------
T ss_pred             EEEEEEEcCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecC---------------
Confidence            999999999 899999998764  69999999999999999999999999999999999999421               


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                               +.+..++|+|||++...... .....||+.|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus       143 ---------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  213 (304)
T 2jam_A          143 ---------EENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES  213 (304)
T ss_dssp             ---------STTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred             ---------CCCCCEEEccCCcceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH
Confidence                     12346888888887654432 23357999999999999989999999999999999999999999887776


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      .....+.......+.                                              .....+++++.+||.+||+
T Consensus       214 ~~~~~i~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~~l~  247 (304)
T 2jam_A          214 KLFEKIKEGYYEFES----------------------------------------------PFWDDISESAKDFICHLLE  247 (304)
T ss_dssp             HHHHHHHHCCCCCCT----------------------------------------------TTTTTSCHHHHHHHHHHHC
T ss_pred             HHHHHHHcCCCCCCc----------------------------------------------cccccCCHHHHHHHHHHcC
Confidence            666555442211110                                              1123457789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      .||++|||+.|+|+||||++...
T Consensus       248 ~dp~~Rps~~~~l~h~~~~~~~~  270 (304)
T 2jam_A          248 KDPNERYTCEKALSHPWIDGNTA  270 (304)
T ss_dssp             SSTTTSCCHHHHHTSHHHHSSCS
T ss_pred             CChhHCcCHHHHhcCccccCCCc
Confidence            99999999999999999987543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=3.1e-49  Score=410.96  Aligned_cols=252  Identities=24%  Similarity=0.361  Sum_probs=213.4

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      .++|++++.||+|+||.||+|++..+++.||||++++.    ....+.+..|..++..+.+    |++++.+++++++.+
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~----~~~i~~l~~~~~~~~  415 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK----PPFLTQLHSCFQTMD  415 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTC----CTTBCCEEEECBCSS
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccC----CCeEEEEEEEEEeCC
Confidence            46899999999999999999999999999999999753    2334567788888877642    244599999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      .+||||||+ +++|.+++....  .+++..++.|+.||+.||+|||++||+||||||+||||+.+|              
T Consensus       416 ~~~lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g--------------  479 (674)
T 3pfq_A          416 RLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG--------------  479 (674)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSS--------------
T ss_pred             EEEEEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCC--------------
Confidence            999999999 999999998765  799999999999999999999999999999999999997666              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                   .+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+
T Consensus       480 -------------~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~  546 (674)
T 3pfq_A          480 -------------HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED  546 (674)
T ss_dssp             -------------CEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             -------------cEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC
Confidence                         46667777665421   22334689999999999999999999999999999999999999999988


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ..+.+..|......+                                                  +..+++++.+||++|
T Consensus       547 ~~~~~~~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~l  576 (674)
T 3pfq_A          547 EDELFQSIMEHNVAY--------------------------------------------------PKSMSKEAVAICKGL  576 (674)
T ss_dssp             HHHHHHHHHSSCCCC--------------------------------------------------CTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC--------------------------------------------------CccCCHHHHHHHHHH
Confidence            877766664422111                                                  234577999999999


Q ss_pred             cccCCCCCCCH-----HHHhcCCCCCCC
Q 013678          403 LRYDPAERLKA-----REALRHPFFTRD  425 (438)
Q Consensus       403 L~~dP~~Rpta-----~ell~hp~f~~~  425 (438)
                      |+.||++|+++     +||++||||++-
T Consensus       577 L~~dP~~R~~~~~~~~~ei~~h~ff~~i  604 (674)
T 3pfq_A          577 MTKHPGKRLGCGPEGERDIKEHAFFRYI  604 (674)
T ss_dssp             SCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred             ccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence            99999999997     999999999863

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=3.3e-49  Score=369.88  Aligned_cols=254  Identities=26%  Similarity=0.428  Sum_probs=214.4

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      .++|++.+.||+|+||.||+|.+..+++.||||++....    ...+.+.+|+.+++.++|+|+     +++++++.+.+
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   87 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNI-----LRMYNYFHDRK   87 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTB-----CCEEEEEECSS
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCE-----eeEEEEEEcCC
Confidence            378999999999999999999999999999999996532    234668889999999988776     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ..++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+||+++.++              
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~--------------  151 (284)
T 2vgo_A           88 RIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG--------------  151 (284)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTC--------------
T ss_pred             EEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCC--------------
Confidence            999999999 889999998765  699999999999999999999999999999999999997655              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                   .++|+|||++...... .....||..|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus       152 -------------~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  218 (284)
T 2vgo_A          152 -------------ELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT  218 (284)
T ss_dssp             -------------CEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             -------------CEEEecccccccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh
Confidence                         4677777766544322 23357899999999999989999999999999999999999999887766


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +....+.....                                                  ..+..++.++.+||.+||+
T Consensus       219 ~~~~~~~~~~~--------------------------------------------------~~~~~~~~~~~~li~~~l~  248 (284)
T 2vgo_A          219 ETHRRIVNVDL--------------------------------------------------KFPPFLSDGSKDLISKLLR  248 (284)
T ss_dssp             HHHHHHHTTCC--------------------------------------------------CCCTTSCHHHHHHHHHHSC
T ss_pred             HHHHHHhcccc--------------------------------------------------CCCCcCCHHHHHHHHHHhh
Confidence            55444332111                                                  1123456789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      .||.+|||+.|+++||||+...++
T Consensus       249 ~~p~~Rps~~~ll~h~~~~~~~~~  272 (284)
T 2vgo_A          249 YHPPQRLPLKGVMEHPWVKANSRR  272 (284)
T ss_dssp             SSGGGSCCHHHHHTCHHHHHHCCC
T ss_pred             cCHhhCCCHHHHhhCHHHHhhccc
Confidence            999999999999999999876543

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=9.3e-49  Score=372.72  Aligned_cols=287  Identities=26%  Similarity=0.435  Sum_probs=218.1

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEeccee---
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF---  162 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~---  162 (438)
                      +..+.++|++++.||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+++.++|+|+     +++++++   
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~   80 (320)
T 2i6l_A            6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNI-----VKVFEILGPS   80 (320)
T ss_dssp             CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEECTT
T ss_pred             cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCe-----eEEEEecccc
Confidence            4567899999999999999999999999999999999987543 445678899999999988877     8888776   


Q ss_pred             -----------ccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 013678          163 -----------DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       163 -----------~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  231 (438)
                                 .+.+..|+||||+.++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus        81 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  157 (320)
T 2i6l_A           81 GSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED  157 (320)
T ss_dssp             SCBCCC----CCSCSEEEEEEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT
T ss_pred             ccccccccccccccCceeEEeeccCCCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC
Confidence                       345789999999977999999653   599999999999999999999999999999999999996422


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC------CcccccCCCcchhHHHhC-CCCCcchhHHHH
Q 013678          232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILG-LGWNYPCDLWSV  304 (438)
Q Consensus       232 ~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSl  304 (438)
                                                ..+||+|||++......      .....+|..|+|||++.+ ..++.++|||||
T Consensus       158 --------------------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl  211 (320)
T 2i6l_A          158 --------------------------LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAA  211 (320)
T ss_dssp             --------------------------TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHH
T ss_pred             --------------------------CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhH
Confidence                                      25677777777654321      223467999999999876 578999999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhh
Q 013678          305 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  384 (438)
Q Consensus       305 G~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (438)
                      ||++|+|++|..||.+.+..+....+....+................+....                    ........
T Consensus       212 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~  271 (320)
T 2i6l_A          212 GCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRND--------------------MTEPHKPL  271 (320)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHH--------------------TTSCCCCH
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCccccccc--------------------ccCCCCCh
Confidence            9999999999999999988888877777665555433222211111000000                    00000011


Q ss_pred             hhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       385 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      ......++.++.+||.+||+.||++|||++|+|+||||+....
T Consensus       272 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  314 (320)
T 2i6l_A          272 TQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSF  314 (320)
T ss_dssp             HHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC
T ss_pred             hHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccC
Confidence            1233457889999999999999999999999999999986543

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=7.5e-49  Score=367.60  Aligned_cols=275  Identities=20%  Similarity=0.265  Sum_probs=208.9

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHH-HhcCCCCcceEEeccee
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~  162 (438)
                      ...+.++|++.+.||+|+||.||+|.+..+++.||||++...   ......+.+|+.++..+ .|+||     +++++++
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~i-----v~~~~~~   80 (289)
T 1x8b_A            6 KSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV-----VRYFSAW   80 (289)
T ss_dssp             CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTB-----CCEEEEE
T ss_pred             cccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCe-----eeeeeee
Confidence            345668999999999999999999999999999999998753   33456778899999888 77766     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                      .+.+..++||||+ +++|.+++....  ...+++..++.++.||+.||+|||++||+||||||+|||++.++...+.+..
T Consensus        81 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~  160 (289)
T 1x8b_A           81 AEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEE  160 (289)
T ss_dssp             EETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------
T ss_pred             ecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccc
Confidence            9999999999999 889999997642  1469999999999999999999999999999999999999887755544332


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                      ....        ........++|+|||.+....... ...||..|+|||++.+. .++.++|||||||++|+|++|..++
T Consensus       161 ~~~~--------~~~~~~~~~kl~Dfg~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~  231 (289)
T 1x8b_A          161 GDED--------DWASNKVMFKIGDLGHVTRISSPQ-VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLP  231 (289)
T ss_dssp             -----------------CCCEEECCCTTCEETTCSC-CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred             cccc--------cccCCceEEEEcccccccccCCcc-ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCC
Confidence            1110        011245579999999998765443 34699999999999876 5678999999999999999999877


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      ......   ..+..  +..                                               ...+..+++++.+|
T Consensus       232 ~~~~~~---~~~~~--~~~-----------------------------------------------~~~~~~~~~~~~~l  259 (289)
T 1x8b_A          232 RNGDQW---HEIRQ--GRL-----------------------------------------------PRIPQVLSQEFTEL  259 (289)
T ss_dssp             SSSHHH---HHHHT--TCC-----------------------------------------------CCCSSCCCHHHHHH
T ss_pred             cchhHH---HHHHc--CCC-----------------------------------------------CCCCcccCHHHHHH
Confidence            543221   11111  000                                               01123567799999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          399 LQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      |.+||+.||++|||+.|+++||||++..+
T Consensus       260 i~~~l~~dp~~Rps~~~ll~h~~~~~~~~  288 (289)
T 1x8b_A          260 LKVMIHPDPERRPSAMALVKHSVLLSASR  288 (289)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTCTTC-----
T ss_pred             HHHHhCCCcccCCCHHHHhhChHhhhhcc
Confidence            99999999999999999999999998654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=8.5e-49  Score=368.92  Aligned_cols=258  Identities=28%  Similarity=0.397  Sum_probs=216.2

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      .....++|++.+.||+|+||.||+|.+..+++.||+|++...    ....+.+.+|+.+++.+.|+||     +++++++
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~   84 (294)
T 2rku_A           10 DPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHV-----VGFHGFF   84 (294)
T ss_dssp             ETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEE
T ss_pred             CCCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCE-----eeeeeee
Confidence            445668999999999999999999999999999999998753    2345677889999999988776     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      .+.+..++||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+||+++.++          
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~----------  152 (294)
T 2rku_A           85 EDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDL----------  152 (294)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC----------
T ss_pred             ccCCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCC----------
Confidence            9999999999999 899999988764  799999999999999999999999999999999999997655          


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                       .+||+|||.+.....   ......||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       153 -----------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  215 (294)
T 2rku_A          153 -----------------EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF  215 (294)
T ss_dssp             -----------------CEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             -----------------CEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                             466777776654332   223357899999999999988999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      ......+....+.....                                                  ..+..++..+.+|
T Consensus       216 ~~~~~~~~~~~~~~~~~--------------------------------------------------~~~~~~~~~~~~l  245 (294)
T 2rku_A          216 ETSCLKETYLRIKKNEY--------------------------------------------------SIPKHINPVAASL  245 (294)
T ss_dssp             CCSSHHHHHHHHHTTCC--------------------------------------------------CCCTTSCHHHHHH
T ss_pred             CCCCHHHHHHHHhhccC--------------------------------------------------CCccccCHHHHHH
Confidence            88766554443322111                                                  1122456789999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          399 LQGLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      |.+||+.||++|||++|+++||||++....
T Consensus       246 i~~~l~~~p~~Rps~~~ll~~~~~~~~~~~  275 (294)
T 2rku_A          246 IQKMLQTDPTARPTINELLNDEFFTSGYIP  275 (294)
T ss_dssp             HHHHTCSSGGGSCCGGGGGGSHHHHTSCCC
T ss_pred             HHHHcccChhhCcCHHHHhhChheecCCcC
Confidence            999999999999999999999999876543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=2e-49  Score=384.17  Aligned_cols=300  Identities=22%  Similarity=0.313  Sum_probs=217.0

Q ss_pred             cCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           86 IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      +++...++|++.+.||+|+||.||+|.+..+++.||+|++...  ....+.+.+|+.+++.++|+||     +++++++.
T Consensus        27 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~  101 (360)
T 3eqc_A           27 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI-----VGFYGAFY  101 (360)
T ss_dssp             CCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTB-----CCEEEEEE
T ss_pred             ccccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCE-----EEEeEEEE
Confidence            4566678999999999999999999999999999999999753  3445678899999999887776     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEecCcccccCCcccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      +++.+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++ ||+||||||+|||++.++          
T Consensus       102 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~----------  169 (360)
T 3eqc_A          102 SDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG----------  169 (360)
T ss_dssp             ETTEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTC----------
T ss_pred             ECCEEEEEEECCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCC----------
Confidence            999999999999 889999998765  699999999999999999999996 999999999999997655          


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccC-CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH-QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                       .++|+|||++.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus       170 -----------------~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  232 (360)
T 3eqc_A          170 -----------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP  232 (360)
T ss_dssp             -----------------CEEECCCCCCHHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred             -----------------CEEEEECCCCcccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                             57888888775432 223345899999999999999999999999999999999999999988


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      .+..+....+.......+............. +     ..+.............................++.++.+||.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  306 (360)
T 3eqc_A          233 PDAKELELMFGCQVEGDAAETPPRPRTPGRP-L-----NKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN  306 (360)
T ss_dssp             CCHHHHHHHHC------------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHH
T ss_pred             CCHHHHHHHhcccccccCCCCCCCcccCCCc-c-----cccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHH
Confidence            7766544333221111111000000000000 0     000000000000111111000000001112346788999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCC
Q 013678          401 GLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      +||+.||++|||++|+|+||||++.
T Consensus       307 ~~L~~dP~~Rpt~~ell~hp~~~~~  331 (360)
T 3eqc_A          307 KCLIKNPAERADLKQLMVHAFIKRS  331 (360)
T ss_dssp             HHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             HHhhcChhhCCCHHHHhhChHhhcc
Confidence            9999999999999999999999764

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3e-49  Score=368.94  Aligned_cols=253  Identities=25%  Similarity=0.416  Sum_probs=186.5

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++.+.||+|+||.||+|++..+++.||||++....    ...+.+.+|+.+++.++|+|+     +++++++.+.+.
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~   85 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSI-----LELYNYFEDSNY   85 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTB-----CCEEEEEECSSE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCe-----EeEEEEEccCCe
Confidence            57999999999999999999999999999999997532    223668889999999888776     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      .++||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+||+++.++               
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~---------------  149 (278)
T 3cok_A           86 VYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNM---------------  149 (278)
T ss_dssp             EEEEEECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTC---------------
T ss_pred             EEEEEecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC---------------
Confidence            99999999 889999998653 4699999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                  .++|+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||.....
T Consensus       150 ------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  217 (278)
T 3cok_A          150 ------------NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTV  217 (278)
T ss_dssp             ------------CEEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSC
T ss_pred             ------------CEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhH
Confidence                        5677777776654322   2235789999999999988899999999999999999999999976543


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .+....+..                                                  .....+..++.++.+||.+||
T Consensus       218 ~~~~~~~~~--------------------------------------------------~~~~~~~~~~~~~~~li~~~l  247 (278)
T 3cok_A          218 KNTLNKVVL--------------------------------------------------ADYEMPSFLSIEAKDLIHQLL  247 (278)
T ss_dssp             C-----CCS--------------------------------------------------SCCCCCTTSCHHHHHHHHHHS
T ss_pred             HHHHHHHhh--------------------------------------------------cccCCccccCHHHHHHHHHHc
Confidence            222111000                                                  000112345778999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          404 RYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      +.||++|||+.++++||||++...
T Consensus       248 ~~dp~~Rps~~~~l~h~~~~~~~~  271 (278)
T 3cok_A          248 RRNPADRLSLSSVLDHPFMSRNSS  271 (278)
T ss_dssp             CSSGGGSCCHHHHTTSTTTC----
T ss_pred             ccCHhhCCCHHHHhcCccccCCCC
Confidence            999999999999999999997654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=7.9e-49  Score=375.14  Aligned_cols=251  Identities=27%  Similarity=0.355  Sum_probs=196.1

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC-
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN-  166 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~-  166 (438)
                      +.++|++++.||+|+||.||+|++..+++.||||+++..  ....+.+.+|+.+++.++|+||     +++++++.+.. 
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~~~   78 (332)
T 3qd2_B            4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI-----VRYFNAWLETPP   78 (332)
T ss_dssp             HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTB-----CCEEEEEEECCS
T ss_pred             hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEEecc
Confidence            457899999999999999999999999999999999743  3355778999999999988877     99988874432 


Q ss_pred             --------------------------------------------------------eEEEEEccC-CCCHHHHHHhcCC-
Q 013678          167 --------------------------------------------------------HICIVFEKL-GPSLYDFLRKNSY-  188 (438)
Q Consensus       167 --------------------------------------------------------~~~lv~e~~-~~~L~~~l~~~~~-  188 (438)
                                                                              .+++||||| +++|.+++..... 
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~  158 (332)
T 3qd2_B           79 EKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL  158 (332)
T ss_dssp             CHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG
T ss_pred             chhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc
Confidence                                                                    489999999 9999999987542 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCC
Q 013678          189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST  268 (438)
Q Consensus       189 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a  268 (438)
                      ...++..++.++.||+.||+|||++||+||||||+|||++.++.                           +||+|||++
T Consensus       159 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~---------------------------~kL~DfG~a  211 (332)
T 3qd2_B          159 EDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV---------------------------VKVGDFGLV  211 (332)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCC---------------------------EEECCCTTC
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCC---------------------------EEEeecCcc
Confidence            23566778999999999999999999999999999999987665                           455555554


Q ss_pred             cccCCC---------------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 013678          269 TFEHQD---------------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV  333 (438)
Q Consensus       269 ~~~~~~---------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~  333 (438)
                      ......               .....||+.|+|||++.+..++.++|||||||++|+|++|..|+.     +....+...
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~-----~~~~~~~~~  286 (332)
T 3qd2_B          212 TAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM-----ERVRIITDV  286 (332)
T ss_dssp             EECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH-----HHHHHHHHH
T ss_pred             cccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh-----HHHHHHHHh
Confidence            433221               123479999999999999999999999999999999999876642     111111111


Q ss_pred             -hCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCC
Q 013678          334 -LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLK  412 (438)
Q Consensus       334 -~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpt  412 (438)
                       .+..|..                                               ....++++.+||.+||+.||++|||
T Consensus       287 ~~~~~~~~-----------------------------------------------~~~~~~~~~~li~~~l~~~p~~Rps  319 (332)
T 3qd2_B          287 RNLKFPLL-----------------------------------------------FTQKYPQEHMMVQDMLSPSPTERPE  319 (332)
T ss_dssp             HTTCCCHH-----------------------------------------------HHHHCHHHHHHHHHHHCSSGGGSCC
T ss_pred             hccCCCcc-----------------------------------------------cccCChhHHHHHHHHccCCCCcCCC
Confidence             1111110                                               0122457789999999999999999


Q ss_pred             HHHHhcCCCCCC
Q 013678          413 AREALRHPFFTR  424 (438)
Q Consensus       413 a~ell~hp~f~~  424 (438)
                      +.|+|+||||++
T Consensus       320 ~~~~l~~~~f~~  331 (332)
T 3qd2_B          320 ATDIIENAIFEN  331 (332)
T ss_dssp             HHHHHHSTTCCC
T ss_pred             HHHHhhchhhhc
Confidence            999999999985

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=5.9e-48  Score=363.75  Aligned_cols=259  Identities=29%  Similarity=0.486  Sum_probs=213.6

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----------hhHHHHHHHHHHHHHHH-hcCCCCcceEE
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----------KYREAAMIEIDVLQRLA-RHDIGGTRCVQ  157 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------~~~~~~~~E~~~l~~l~-~~~i~~~~iv~  157 (438)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||+++...          ...+.+.+|+.+++++. |+||     ++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i-----~~   88 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNI-----IQ   88 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTB-----CC
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCE-----ee
Confidence            45689999999999999999999999999999999996432          23466788999999996 7776     99


Q ss_pred             ecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccC
Q 013678          158 IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  236 (438)
Q Consensus       158 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~  236 (438)
                      +++++...+..++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+||+++.++     
T Consensus        89 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~-----  161 (298)
T 1phk_A           89 LKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM-----  161 (298)
T ss_dssp             EEEEEECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----
T ss_pred             eeeeeccCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCC-----
Confidence            999999999999999999 899999998764  799999999999999999999999999999999999997655     


Q ss_pred             CccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHh------CCCCCcchhHHHHHHHH
Q 013678          237 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVIL------GLGWNYPCDLWSVGCIL  308 (438)
Q Consensus       237 df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~------~~~~~~~~DiwSlG~il  308 (438)
                                            .++|+|||++......  .....||+.|+|||++.      ...++.++|||||||++
T Consensus       162 ----------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l  219 (298)
T 1phk_A          162 ----------------------NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM  219 (298)
T ss_dssp             ----------------------CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHH
T ss_pred             ----------------------cEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHH
Confidence                                  4677777766554322  23357899999999986      34588999999999999


Q ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhcc
Q 013678          309 VELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  388 (438)
Q Consensus       309 ~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (438)
                      |+|++|..||...+.......+.......+.                                              ...
T Consensus       220 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~  253 (298)
T 1phk_A          220 YTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS----------------------------------------------PEW  253 (298)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT----------------------------------------------TTG
T ss_pred             HHHHHCCCCCcCccHHHHHHHHhcCCcccCc----------------------------------------------ccc
Confidence            9999999999887776655554432211110                                              011


Q ss_pred             CCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       389 ~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      ..++..+.+||.+||+.||++|||+.|+++||||++...
T Consensus       254 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  292 (298)
T 1phk_A          254 DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVV  292 (298)
T ss_dssp             GGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC-
T ss_pred             cccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhccc
Confidence            245678999999999999999999999999999997643

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.9e-49  Score=378.99  Aligned_cols=248  Identities=27%  Similarity=0.470  Sum_probs=208.2

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh---------hHHHHHHHHHHHHHHHhcCCCCcceEEec
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---------YREAAMIEIDVLQRLARHDIGGTRCVQIR  159 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~E~~~l~~l~~~~i~~~~iv~~~  159 (438)
                      .+.++|++.+.||+|+||.||+|++..+++.||||+++....         ....+.+|+.+++.++|+||     ++++
T Consensus        21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~I-----v~~~   95 (335)
T 3dls_A           21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI-----IKVL   95 (335)
T ss_dssp             HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTB-----CCEE
T ss_pred             ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCE-----eeEE
Confidence            456899999999999999999999999999999999975321         23456789999999988777     9999


Q ss_pred             ceeccCCeEEEEEccC-CC-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 013678          160 NWFDYRNHICIVFEKL-GP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~~-~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      +++.+.+.+++||||+ ++ +|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++      
T Consensus        96 ~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~------  167 (335)
T 3dls_A           96 DIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDF------  167 (335)
T ss_dssp             EEEECSSEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS------
T ss_pred             EEEeeCCEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCC------
Confidence            9999999999999998 55 9999998764  699999999999999999999999999999999999997655      


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCC-CcchhHHHHHHHHHHHHhC
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg  314 (438)
                                           .+||+|||++.......  ....||+.|+|||++.+..+ +.++|||||||++|+|++|
T Consensus       168 ---------------------~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g  226 (335)
T 3dls_A          168 ---------------------TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFE  226 (335)
T ss_dssp             ---------------------CEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHS
T ss_pred             ---------------------cEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhC
Confidence                                 57778888776544332  34579999999999998876 8899999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      ..||......         .                                               ......+..++++
T Consensus       227 ~~pf~~~~~~---------~-----------------------------------------------~~~~~~~~~~~~~  250 (335)
T 3dls_A          227 ENPFCELEET---------V-----------------------------------------------EAAIHPPYLVSKE  250 (335)
T ss_dssp             SCSCSSGGGG---------T-----------------------------------------------TTCCCCSSCCCHH
T ss_pred             CCchhhHHHH---------H-----------------------------------------------hhccCCCcccCHH
Confidence            9999642110         0                                               0000112245778


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          395 LIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +.+||.+||+.||++|||+.|+++||||++..
T Consensus       251 l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  282 (335)
T 3dls_A          251 LMSLVSGLLQPVPERRTTLEKLVTDPWVTQPV  282 (335)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence            99999999999999999999999999998754

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=4.2e-48  Score=370.23  Aligned_cols=282  Identities=24%  Similarity=0.492  Sum_probs=214.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHH-hcCCCCcceEEecceecc--CCe
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDY--RNH  167 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~--~~~  167 (438)
                      .++|++.++||+|+||.||+|++..+++.||||+++..  ..+.+.+|+.+++.+. |+||     +++++++.+  ...
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i-----~~~~~~~~~~~~~~  107 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNI-----ITLADIVKDPVSRT  107 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTB-----CCEEEEEECTTTCC
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCE-----EEeeeeeccCCCCc
Confidence            47899999999999999999999999999999998743  3467889999999997 6666     999999887  678


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      .++||||+ +++|.+++.     .+++..++.++.||+.||+|||++||+||||||+|||++.++               
T Consensus       108 ~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~---------------  167 (330)
T 3nsz_A          108 PALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH---------------  167 (330)
T ss_dssp             EEEEEECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT---------------
T ss_pred             eEEEEeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCC---------------
Confidence            99999999 899999874     388999999999999999999999999999999999997544               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCCC-CCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQ-THE  322 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~-~~~  322 (438)
                                 ..+||+|||++......  .....||..|+|||++.+ ..++.++|||||||++|+|++|..||. +.+
T Consensus       168 -----------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~  236 (330)
T 3nsz_A          168 -----------RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD  236 (330)
T ss_dssp             -----------TEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS
T ss_pred             -----------CEEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCc
Confidence                       25788888887654322  234578999999999987 568999999999999999999999994 455


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhc---cchh-hhhhccCCchhHHHHH
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL---RLPN-LIMQHVDHSAGDLIDL  398 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~l~~l  398 (438)
                      ..+.+..+....+..+..-  .....         ....      ...........   .... ........+++++.+|
T Consensus       237 ~~~~l~~~~~~~~~~~~~~--~~~~~---------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  299 (330)
T 3nsz_A          237 NYDQLVRIAKVLGTEDLYD--YIDKY---------NIEL------DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF  299 (330)
T ss_dssp             HHHHHHHHHHHHCHHHHHH--HHHHT---------TCCC------CTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHH
T ss_pred             hHHHHHHHHHhcCCchhhh--HHHHh---------cccc------ccchhhhhhhccccchhhhccccccccCCHHHHHH
Confidence            6666666666555321100  00000         0000      00000000000   0000 0011122367899999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          399 LQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      |.+||++||++|||++|+|+||||++..+
T Consensus       300 i~~~L~~dP~~Rpta~e~l~hp~f~~~~~  328 (330)
T 3nsz_A          300 LDKLLRYDHQSRLTAREAMEHPYFYTVVK  328 (330)
T ss_dssp             HHTTSCSSGGGSCCHHHHHTSGGGTTCC-
T ss_pred             HHHHhcCCcccCCCHHHHhcCccHhhhcc
Confidence            99999999999999999999999997643

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=2e-48  Score=371.72  Aligned_cols=261  Identities=22%  Similarity=0.411  Sum_probs=210.3

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceecc-
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDY-  164 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~-  164 (438)
                      .....++|++.+.||+|+||.||+|.+..+++.||||++.......+.+.+|+.+++.+ .|+||     +++++++.. 
T Consensus        19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i-----~~~~~~~~~~   93 (326)
T 2x7f_A           19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNI-----ATYYGAFIKK   93 (326)
T ss_dssp             CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTB-----CCEEEEEEEC
T ss_pred             ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCe-----eeeeeEEeec
Confidence            34567899999999999999999999999999999999987666667889999999999 67766     999999876 


Q ss_pred             -----CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCc
Q 013678          165 -----RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  238 (438)
Q Consensus       165 -----~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df  238 (438)
                           .+.+++||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++       
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~-------  166 (326)
T 2x7f_A           94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA-------  166 (326)
T ss_dssp             C--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTC-------
T ss_pred             cCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCC-------
Confidence                 56899999999 88999999876445799999999999999999999999999999999999997655       


Q ss_pred             cccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHh-----CCCCCcchhHHHHHHHHHH
Q 013678          239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVE  310 (438)
Q Consensus       239 ~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~e  310 (438)
                                          .+||+|||++......   .....||+.|+|||++.     +..++.++|||||||++|+
T Consensus       167 --------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~  226 (326)
T 2x7f_A          167 --------------------EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE  226 (326)
T ss_dssp             --------------------CEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHH
T ss_pred             --------------------CEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHH
Confidence                                5677777776654322   23357899999999997     4568899999999999999


Q ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC
Q 013678          311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  390 (438)
Q Consensus       311 lltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (438)
                      |++|..||...+.......+...  ..|.                                              .....
T Consensus       227 l~~g~~p~~~~~~~~~~~~~~~~--~~~~----------------------------------------------~~~~~  258 (326)
T 2x7f_A          227 MAEGAPPLCDMHPMRALFLIPRN--PAPR----------------------------------------------LKSKK  258 (326)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHS--CCCC----------------------------------------------CSCSC
T ss_pred             HHhCCCCCCCCcHHHHHHHhhcC--cccc----------------------------------------------CCccc
Confidence            99999999877765554433221  0000                                              01134


Q ss_pred             chhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       391 ~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      ++..+.+||.+||..||.+|||+.++++||||++...
T Consensus       259 ~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  295 (326)
T 2x7f_A          259 WSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPN  295 (326)
T ss_dssp             SCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCTT
T ss_pred             cCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCcc
Confidence            5678999999999999999999999999999987643

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.1e-48  Score=374.38  Aligned_cols=255  Identities=29%  Similarity=0.447  Sum_probs=201.6

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ...+|++++.||+|+||.||+|.+ .+++.||||++...   ....+.+.+|+.++..+.|+   ++|++++++++.+.+
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~---~~~iv~~~~~~~~~~   82 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH---SDKIIRLYDYEITDQ   82 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTT---CTTBCCEEEEEECSS
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhc---CCceEEEeeeEeeCC
Confidence            457899999999999999999997 46889999998743   23446778999999999872   145599999999999


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          167 HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       167 ~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      .+|||||+.+++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++ ++               
T Consensus        83 ~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~---------------  144 (343)
T 3dbq_A           83 YIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DG---------------  144 (343)
T ss_dssp             EEEEEECCCSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TT---------------
T ss_pred             EEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CC---------------
Confidence            999999977999999998764  799999999999999999999999999999999999995 23               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhC-----------CCCCcchhHHHHHHHHHH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILG-----------LGWNYPCDLWSVGCILVE  310 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSlG~il~e  310 (438)
                                  .+||+|||++.......     ...+||+.|+|||++.+           ..++.++|||||||++|+
T Consensus       145 ------------~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~e  212 (343)
T 3dbq_A          145 ------------MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY  212 (343)
T ss_dssp             ------------EEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHH
T ss_pred             ------------cEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHH
Confidence                        47778888776543322     23579999999999975           568899999999999999


Q ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC
Q 013678          311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  390 (438)
Q Consensus       311 lltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (438)
                      |++|..||.......  ..+......                   ....                          ..+..
T Consensus       213 ll~g~~pf~~~~~~~--~~~~~~~~~-------------------~~~~--------------------------~~~~~  245 (343)
T 3dbq_A          213 MTYGKTPFQQIINQI--SKLHAIIDP-------------------NHEI--------------------------EFPDI  245 (343)
T ss_dssp             HHHSSCTTTTCCSHH--HHHHHHHCT-------------------TSCC--------------------------CCCCC
T ss_pred             HHhCCCcchhhhhHH--HHHHHHhcC-------------------Cccc--------------------------CCccc
Confidence            999999997643321  111111100                   0011                          11223


Q ss_pred             chhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       391 ~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .+.++.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       246 ~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          246 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             CCHHHHHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence            45689999999999999999999999999999754

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=7.7e-49  Score=365.66  Aligned_cols=258  Identities=25%  Similarity=0.372  Sum_probs=207.1

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      ++...++|++.+.||+|+||.||+|.+..+++.||||++....    ...+.+.+|+.+++.++|+||     +++++++
T Consensus         6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~   80 (276)
T 2h6d_A            6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI-----IKLYQVI   80 (276)
T ss_dssp             -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTB-----CCEEEEE
T ss_pred             CcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCE-----eEEEEEE
Confidence            3455689999999999999999999999999999999997532    234577889999999888776     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      .+.+..++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+||+++.++          
T Consensus        81 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~----------  148 (276)
T 2h6d_A           81 STPTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM----------  148 (276)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTS----------
T ss_pred             ecCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCC----------
Confidence            9999999999999 899999998764  699999999999999999999999999999999999997655          


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCC-CcchhHHHHHHHHHHHHhCCCCC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf  318 (438)
                                       .++|+|||++.......  ....||+.|+|||++.+..+ +.++|||||||++|+|++|..||
T Consensus       149 -----------------~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  211 (276)
T 2h6d_A          149 -----------------NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF  211 (276)
T ss_dssp             -----------------CEEECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             -----------------CEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCC
Confidence                             46666666665443221  23478999999999988765 68999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      ...........+.......                                                  +..++..+.+|
T Consensus       212 ~~~~~~~~~~~~~~~~~~~--------------------------------------------------~~~~~~~l~~l  241 (276)
T 2h6d_A          212 DDEHVPTLFKKIRGGVFYI--------------------------------------------------PEYLNRSVATL  241 (276)
T ss_dssp             CCSSHHHHHHHHHHCCCCC--------------------------------------------------CTTSCHHHHHH
T ss_pred             CCCcHHHHHHHhhcCcccC--------------------------------------------------chhcCHHHHHH
Confidence            8776655544443221111                                                  12346689999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          399 LQGLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      |.+||+.||++|||+.|+++||||++...+
T Consensus       242 i~~~l~~~p~~Rps~~~~l~h~~~~~~~~~  271 (276)
T 2h6d_A          242 LMHMLQVDPLKRATIKDIREHEWFKQDLPS  271 (276)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHSHHHHTTCCG
T ss_pred             HHHHccCChhhCCCHHHHHhChhhccCchh
Confidence            999999999999999999999999987543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=1.8e-49  Score=391.75  Aligned_cols=260  Identities=31%  Similarity=0.483  Sum_probs=203.8

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---------hhHHHHHHHHHHHHHHHhcCCCCcceEEec
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLARHDIGGTRCVQIR  159 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~  159 (438)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||++....         .....+.+|+.+++.++|+||     ++++
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~l~  206 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI-----IKIK  206 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTB-----CCCC
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCE-----eeEE
Confidence            35688999999999999999999999999999999997532         112347789999999988877     9999


Q ss_pred             ceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCc
Q 013678          160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  238 (438)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df  238 (438)
                      +++.. +..|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++       
T Consensus       207 ~~~~~-~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~-------  276 (419)
T 3i6u_A          207 NFFDA-EDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE-------  276 (419)
T ss_dssp             EEEES-SEEEEEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS-------
T ss_pred             EEEec-CceEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCC-------
Confidence            98865 5589999999 999999887654  799999999999999999999999999999999999996543       


Q ss_pred             cccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhC---CCCCcchhHHHHHHHHHHHHh
Q 013678          239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCS  313 (438)
Q Consensus       239 ~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~ellt  313 (438)
                                       ....+||+|||++.......  ...+||+.|+|||++.+   ..++.++|||||||++|+|++
T Consensus       277 -----------------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~llt  339 (419)
T 3i6u_A          277 -----------------EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS  339 (419)
T ss_dssp             -----------------SSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHH
T ss_pred             -----------------CcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHH
Confidence                             23468999999988765432  34689999999999864   567899999999999999999


Q ss_pred             CCCCCCCCChHHHH-HHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCch
Q 013678          314 GEALFQTHENLEHL-AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  392 (438)
Q Consensus       314 g~~pf~~~~~~~~~-~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (438)
                      |..||........+ ..+.......                                              .......++
T Consensus       340 g~~pf~~~~~~~~~~~~i~~~~~~~----------------------------------------------~~~~~~~~~  373 (419)
T 3i6u_A          340 GYPPFSEHRTQVSLKDQITSGKYNF----------------------------------------------IPEVWAEVS  373 (419)
T ss_dssp             SSCSSCCCSSSCCHHHHHHTTCCCC----------------------------------------------CHHHHTTSC
T ss_pred             CCCCCCCCcchHHHHHHHhcCCCCC----------------------------------------------CchhhcccC
Confidence            99999765432211 1111110000                                              011223567


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       393 ~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +.+.+||.+||+.||++|||++|+|+||||++..
T Consensus       374 ~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  407 (419)
T 3i6u_A          374 EKALDLVKKLLVVDPKARFTTEEALRHPWLQDED  407 (419)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHH
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhCCcccCChh
Confidence            7899999999999999999999999999998743

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=2.2e-48  Score=366.23  Aligned_cols=258  Identities=24%  Similarity=0.380  Sum_probs=207.6

Q ss_pred             ecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec----chhhHHHHHHHHHHHHHHHhcCCCCcceEEecc
Q 013678           85 AIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (438)
Q Consensus        85 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~  160 (438)
                      .+|+.+.++|++++.||+|+||.||+|++..+++.||+|++..    .....+.+.+|+.++..++|+||     +++++
T Consensus         4 ~~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i-----v~~~~   78 (294)
T 4eqm_A            4 MIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNI-----VSMID   78 (294)
T ss_dssp             CCSSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTB-----CCEEE
T ss_pred             chhhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCC-----ceEEE
Confidence            3577889999999999999999999999999999999999853    22345678899999999988877     99999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                      ++.+++.+|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++        
T Consensus        79 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~--------  148 (294)
T 4eqm_A           79 VDEEDDCYYLVMEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNK--------  148 (294)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--------
T ss_pred             eeeeCCeEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--------
Confidence            999999999999999 899999998765  799999999999999999999999999999999999997655        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~  315 (438)
                                         .+||+|||++......    .....||+.|+|||++.+..++.++|||||||++|+|++|+
T Consensus       149 -------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~  209 (294)
T 4eqm_A          149 -------------------TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE  209 (294)
T ss_dssp             -------------------CEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             -------------------CEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence                               5677777777654322    22357999999999999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      .||.+.+.........  ....|                                           .........+++.+
T Consensus       210 ~pf~~~~~~~~~~~~~--~~~~~-------------------------------------------~~~~~~~~~~~~~l  244 (294)
T 4eqm_A          210 PPFNGETAVSIAIKHI--QDSVP-------------------------------------------NVTTDVRKDIPQSL  244 (294)
T ss_dssp             CSSCSSCHHHHHHHHH--SSCCC-------------------------------------------CHHHHSCTTSCHHH
T ss_pred             CCCCCCChHHHHHHHh--hccCC-------------------------------------------CcchhcccCCCHHH
Confidence            9998877655432221  11111                                           11122334567899


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCC
Q 013678          396 IDLLQGLLRYDPAERLKAREALRHPF  421 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~hp~  421 (438)
                      .++|.+||+.||++||+..+.+.+.|
T Consensus       245 ~~li~~~l~~dp~~R~~~~~~l~~~l  270 (294)
T 4eqm_A          245 SNVILRATEKDKANRYKTIQEMKDDL  270 (294)
T ss_dssp             HHHHHHHSCSSGGGSCSSHHHHHHHH
T ss_pred             HHHHHHHhcCCHhHccccHHHHHHHH
Confidence            99999999999999995444444444

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=1.1e-49  Score=387.56  Aligned_cols=270  Identities=15%  Similarity=0.106  Sum_probs=195.7

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHH--hcCCCCcceEEec------
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLA--RHDIGGTRCVQIR------  159 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~--~~~i~~~~iv~~~------  159 (438)
                      .+|++.+.||+|+||.||+|++..+++.||||++...    ....+.+.+|+.+++.|.  |+|+     ++++      
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~i-----v~~~~~~~~p  136 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEE-----ARDRRRLLLP  136 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC---------------CBCCC
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhh-----hhhceeEEee
Confidence            4599999999999999999999999999999999863    244566778887777776  6665     6644      


Q ss_pred             -ceeccC-----------------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHH------HHHHHHHHHHHHHHHhCCc
Q 013678          160 -NWFDYR-----------------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLV------RELGRQLLESVAFMHELRL  215 (438)
Q Consensus       160 -~~~~~~-----------------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~------~~i~~qi~~aL~~LH~~~i  215 (438)
                       +++...                 ..+|||||||.++|.+++.... ..++...+      ..++.||+.||+|||++||
T Consensus       137 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~i  215 (371)
T 3q60_A          137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKGL  215 (371)
T ss_dssp             CEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCC
Confidence             333222                 3489999999899999998643 23454445      6777999999999999999


Q ss_pred             eecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC--C
Q 013678          216 IHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG--L  293 (438)
Q Consensus       216 vHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~--~  293 (438)
                      +||||||+|||++.+|                           .+||+|||++...........+|+.|+|||++.+  .
T Consensus       216 vHrDikp~NIll~~~~---------------------------~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~  268 (371)
T 3q60_A          216 VHGHFTPDNLFIMPDG---------------------------RLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTA  268 (371)
T ss_dssp             EETTCSGGGEEECTTS---------------------------CEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEE
T ss_pred             ccCcCCHHHEEECCCC---------------------------CEEEEecceeeecCCCccCccCCcCCcChhhccCCCC
Confidence            9999999999997665                           5677777777665544435577899999999987  6


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHH
Q 013678          294 GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA  373 (438)
Q Consensus       294 ~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (438)
                      .++.++|||||||++|+|++|+.||.+.......                        .+.   ......          
T Consensus       269 ~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~------------------------~~~---~~~~~~----------  311 (371)
T 3q60_A          269 TFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKG------------------------SWK---RPSLRV----------  311 (371)
T ss_dssp             ECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTT------------------------CCC---BCCTTS----------
T ss_pred             CcCccccHHHHHHHHHHHHhCCCCCCCcCccccc------------------------chh---hhhhhh----------
Confidence            7999999999999999999999999765321000                        000   000000          


Q ss_pred             HHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCCceeeeec
Q 013678          374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLVAT  435 (438)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~~~~~~~~  435 (438)
                          .............+++.+.+||.+||+.||++|||+.|+|+||||++........+++
T Consensus       312 ----~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~~~~s~  369 (371)
T 3q60_A          312 ----PGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEISSSLST  369 (371)
T ss_dssp             ----CCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHHHHHHHC-
T ss_pred             ----ccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHHHhhhhhc
Confidence                0000111112246688999999999999999999999999999998754444433333

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=6e-48  Score=362.38  Aligned_cols=253  Identities=23%  Similarity=0.406  Sum_probs=204.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc----
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY----  164 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~----  164 (438)
                      ..|++.+.||+|+||.||+|.+..++..||+|++...   ....+.+.+|+.+++.++|+||     +++++++..    
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~  100 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI-----VRFYDSWESTVKG  100 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEEESSS
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCe-----eeeeeeeccccCC
Confidence            4589999999999999999999999999999998743   3345678899999999988777     999988764    


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEecCcccccCCcccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      ...+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++|  |+||||||+|||++.            
T Consensus       101 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~------------  166 (290)
T 1t4h_A          101 KKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG------------  166 (290)
T ss_dssp             CEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS------------
T ss_pred             CceEEEEEEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEEC------------
Confidence            46799999999 899999998764  6999999999999999999999999  999999999999962            


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                    .+..+||+|||++....... ....||+.|+|||++.+ .++.++|||||||++|+|++|..||..
T Consensus       167 --------------~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~  231 (290)
T 1t4h_A          167 --------------PTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE  231 (290)
T ss_dssp             --------------TTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             --------------CCCCEEEeeCCCcccccccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence                          22357888888876544333 33579999999998764 589999999999999999999999987


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      ............. +..+                                              .......++++.+||.
T Consensus       232 ~~~~~~~~~~~~~-~~~~----------------------------------------------~~~~~~~~~~l~~li~  264 (290)
T 1t4h_A          232 CQNAAQIYRRVTS-GVKP----------------------------------------------ASFDKVAIPEVKEIIE  264 (290)
T ss_dssp             CSSHHHHHHHHTT-TCCC----------------------------------------------GGGGGCCCHHHHHHHH
T ss_pred             cCcHHHHHHHHhc-cCCc----------------------------------------------cccCCCCCHHHHHHHH
Confidence            5554433221110 0000                                              0112234568999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCC
Q 013678          401 GLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      +||+.||.+|||+.|+|+||||+++
T Consensus       265 ~~l~~dp~~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          265 GCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             HHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             HHccCChhhCCCHHHHhhCcccccC
Confidence            9999999999999999999999875

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=4.6e-48  Score=378.15  Aligned_cols=254  Identities=29%  Similarity=0.441  Sum_probs=202.4

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ..+|++.+.||+|+||.||+|.+.. ++.||||++...   ....+.+.+|+.++..+.|+   ++|++++++++...+.
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~---~~~iv~~~~~~~~~~~  130 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH---SDKIIRLYDYEITDQY  130 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTT---CTTBCCEEEEEECSSE
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccC---CCeEEEEEEEEecCCE
Confidence            3569999999999999999999865 889999999643   23456788999999999862   2455999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      +|||||+.+++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++ ++                
T Consensus       131 ~~lv~E~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~----------------  191 (390)
T 2zmd_A          131 IYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DG----------------  191 (390)
T ss_dssp             EEEEEECCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SS----------------
T ss_pred             EEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CC----------------
Confidence            99999966999999998765  789999999999999999999999999999999999994 23                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhC-----------CCCCcchhHHHHHHHHHHH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILG-----------LGWNYPCDLWSVGCILVEL  311 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSlG~il~el  311 (438)
                                 .+||+|||++.......     ...+||+.|+|||++.+           ..++.++|||||||++|+|
T Consensus       192 -----------~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~el  260 (390)
T 2zmd_A          192 -----------MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM  260 (390)
T ss_dssp             -----------CEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHH
T ss_pred             -----------eEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHH
Confidence                       57888888776543322     23579999999999976           3588999999999999999


Q ss_pred             HhCCCCCCCCChH-HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC
Q 013678          312 CSGEALFQTHENL-EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  390 (438)
Q Consensus       312 ltg~~pf~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (438)
                      ++|..||...... ..+..+..   .                   .....                          .+..
T Consensus       261 l~G~~Pf~~~~~~~~~~~~~~~---~-------------------~~~~~--------------------------~~~~  292 (390)
T 2zmd_A          261 TYGKTPFQQIINQISKLHAIID---P-------------------NHEIE--------------------------FPDI  292 (390)
T ss_dssp             HHSSCTTTTCCCHHHHHHHHHC---T-------------------TSCCC--------------------------CCCC
T ss_pred             HHCCCcchhhhHHHHHHHHHhC---c-------------------cccCC--------------------------CCcc
Confidence            9999999765432 22221111   0                   00011                          1123


Q ss_pred             chhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       391 ~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      .+.++.+||.+||+.||++|||+.|+|+||||+...
T Consensus       293 ~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          293 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             chHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence            356899999999999999999999999999997653

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=2.2e-48  Score=371.02  Aligned_cols=260  Identities=31%  Similarity=0.479  Sum_probs=208.2

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---------hhHHHHHHHHHHHHHHHhcCCCCcceEEe
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLARHDIGGTRCVQI  158 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~  158 (438)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||||++....         .....+.+|+.+++.++|+||     +++
T Consensus         6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~   80 (322)
T 2ycf_A            6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI-----IKI   80 (322)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTB-----CCE
T ss_pred             hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCC-----ceE
Confidence            446689999999999999999999999999999999986432         123457789999999988877     999


Q ss_pred             cceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 013678          159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       159 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      ++++..++ .|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++      
T Consensus        81 ~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~------  151 (322)
T 2ycf_A           81 KNFFDAED-YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE------  151 (322)
T ss_dssp             EEEEESSS-EEEEEECCTTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS------
T ss_pred             eeEEcCCc-eEEEEecCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCC------
Confidence            99987655 89999999 889999987654  799999999999999999999999999999999999997644      


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHh---CCCCCcchhHHHHHHHHHHHH
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELC  312 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~ell  312 (438)
                                        ....+||+|||++.......  ....||+.|+|||++.   ...++.++|||||||++|+|+
T Consensus       152 ------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~  213 (322)
T 2ycf_A          152 ------------------EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL  213 (322)
T ss_dssp             ------------------SSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHH
T ss_pred             ------------------CCCeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHH
Confidence                              23458999999987765432  2357899999999985   456889999999999999999


Q ss_pred             hCCCCCCCCChHH-HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCc
Q 013678          313 SGEALFQTHENLE-HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  391 (438)
Q Consensus       313 tg~~pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (438)
                      +|..||....... ....+.......                                              .......+
T Consensus       214 ~g~~pf~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~  247 (322)
T 2ycf_A          214 SGYPPFSEHRTQVSLKDQITSGKYNF----------------------------------------------IPEVWAEV  247 (322)
T ss_dssp             HSSCSSCSTTCSSCHHHHHHHTCCCC----------------------------------------------CHHHHTTS
T ss_pred             hCCCCCcccchHHHHHHHHHhCcccc----------------------------------------------Cchhhhhc
Confidence            9999997644321 111121111000                                              01112345


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       392 ~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      +..+.+||.+||+.||++|||+.|+|+||||++.
T Consensus       248 ~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred             CHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence            7789999999999999999999999999999864

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=7.1e-49  Score=373.90  Aligned_cols=283  Identities=20%  Similarity=0.316  Sum_probs=209.7

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ..+.++|++.+.||+|+||.||+|++..+++.||||+++...  ...+.+.+|+.+++.++|+||     +++++++...
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~   79 (319)
T 4euu_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNI-----VKLFAIEEET   79 (319)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTB-----CCEEEEEECT
T ss_pred             cCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCc-----ceEEEEeecC
Confidence            345689999999999999999999999999999999997533  335677899999999988877     9999988765


Q ss_pred             C--eEEEEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          166 N--HICIVFEKL-GPSLYDFLRKNSY-RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       166 ~--~~~lv~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      .  ..|+||||+ +++|.+++..... ..+++..++.++.||+.||+|||++||+||||||+|||+....          
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~----------  149 (319)
T 4euu_A           80 TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE----------  149 (319)
T ss_dssp             TTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECT----------
T ss_pred             CCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccC----------
Confidence            4  899999999 8999999986432 2399999999999999999999999999999999999983321          


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHh--------CCCCCcchhHHHHHHHHHHH
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVIL--------GLGWNYPCDLWSVGCILVEL  311 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~--------~~~~~~~~DiwSlG~il~el  311 (438)
                                   +....+||+|||++.......  ....||..|+|||++.        +..++.++|||||||++|||
T Consensus       150 -------------~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el  216 (319)
T 4euu_A          150 -------------DGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA  216 (319)
T ss_dssp             -------------TSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHH
T ss_pred             -------------CCCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHH
Confidence                         233468888898887654332  3357999999999987        46789999999999999999


Q ss_pred             HhCCCCCCCCCh-HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC
Q 013678          312 CSGEALFQTHEN-LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  390 (438)
Q Consensus       312 ltg~~pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (438)
                      ++|..||..... ......+.......|...+......      ......|.....                ........
T Consensus       217 ~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~------~~~~~~~~~~~~----------------~~~~~~~~  274 (319)
T 4euu_A          217 ATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKA------ENGPIDWSGDMP----------------VSCSLSRG  274 (319)
T ss_dssp             HHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECS------TTCCEEEESSCC----------------TTCSSCHH
T ss_pred             HhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcc------cCCccccCccCC----------------cccccchh
Confidence            999999975432 2222222232222221110000000      000011110000                00011223


Q ss_pred             chhHHHHHHHHccccCCCCCCCHHHHhcCC
Q 013678          391 SAGDLIDLLQGLLRYDPAERLKAREALRHP  420 (438)
Q Consensus       391 ~~~~l~~ll~~~L~~dP~~Rpta~ell~hp  420 (438)
                      .+..+.+||.+||+.||++|||++|+|+||
T Consensus       275 ~~~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          275 LQVLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             HHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             HHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence            466889999999999999999999999986

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=3.6e-48  Score=366.41  Aligned_cols=257  Identities=23%  Similarity=0.424  Sum_probs=208.2

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-----hhHHHHHHHHHHHHHHHhcCCCCcceEEeccee--
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF--  162 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~--  162 (438)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|+++...     ...+.+.+|+.+++.++|+||     +++++++  
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~   77 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV-----IQLVDVLYN   77 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEC
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCe-----eEEEEEEEc
Confidence            4578999999999999999999999999999999997532     345678899999999988777     9999988  


Q ss_pred             ccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          163 DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       163 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      .+.+..|+||||+.++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++           
T Consensus        78 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~-----------  146 (305)
T 2wtk_C           78 EEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGG-----------  146 (305)
T ss_dssp             C---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----------
T ss_pred             CCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCC-----------
Confidence            455689999999966698988876656899999999999999999999999999999999999997665           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCC--CCcchhHHHHHHHHHHHHhCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLG--WNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltg~  315 (438)
                                      .++|+|||.+......     .....||..|+|||++.+..  ++.++|||||||++|+|++|.
T Consensus       147 ----------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~  210 (305)
T 2wtk_C          147 ----------------TLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL  210 (305)
T ss_dssp             ----------------CEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSS
T ss_pred             ----------------cEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCC
Confidence                            4666666666543211     12346899999999998754  378999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      .||.+.+.......+.....                                                  .....+++.+
T Consensus       211 ~p~~~~~~~~~~~~i~~~~~--------------------------------------------------~~~~~~~~~l  240 (305)
T 2wtk_C          211 YPFEGDNIYKLFENIGKGSY--------------------------------------------------AIPGDCGPPL  240 (305)
T ss_dssp             CSCCCSSHHHHHHHHHHCCC--------------------------------------------------CCCSSSCHHH
T ss_pred             CCCCCchHHHHHHHHhcCCC--------------------------------------------------CCCCccCHHH
Confidence            99988776655544432111                                                  1123456789


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          396 IDLLQGLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      .+||.+||+.||++|||+.|+++||||++....
T Consensus       241 ~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~  273 (305)
T 2wtk_C          241 SDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPP  273 (305)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCCC
T ss_pred             HHHHHHHccCChhhCCCHHHHhcCcccccCCCC
Confidence            999999999999999999999999999876543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=6.2e-49  Score=372.94  Aligned_cols=258  Identities=22%  Similarity=0.303  Sum_probs=207.2

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      ...+.++|++.+.||+|+||.||+|++..+++.||||+++...    .....+.+|+.++..++|+||     +++++++
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~   81 (311)
T 3ork_A            7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI-----VAVYDTG   81 (311)
T ss_dssp             CSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTB-----CCEEEEE
T ss_pred             cceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCc-----ceEEEee
Confidence            3567889999999999999999999999999999999997532    334567889999888887776     9999987


Q ss_pred             ccCC----eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 013678          163 DYRN----HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       163 ~~~~----~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      ....    ..|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++      
T Consensus        82 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~------  153 (311)
T 3ork_A           82 EAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN------  153 (311)
T ss_dssp             EEEETTEEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTS------
T ss_pred             eccCCCCcccEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCC------
Confidence            7543    459999999 899999998765  799999999999999999999999999999999999997766      


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHH
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL  311 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  311 (438)
                                           .+||+|||++......      .....||+.|+|||++.+..++.++|||||||++|+|
T Consensus       154 ---------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~l  212 (311)
T 3ork_A          154 ---------------------AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV  212 (311)
T ss_dssp             ---------------------CEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred             ---------------------CEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHH
Confidence                                 4666777766543322      1224789999999999999999999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCc
Q 013678          312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  391 (438)
Q Consensus       312 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (438)
                      ++|..||.+.+.......+......++                                              ......+
T Consensus       213 l~g~~pf~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~  246 (311)
T 3ork_A          213 LTGEPPFTGDSPVSVAYQHVREDPIPP----------------------------------------------SARHEGL  246 (311)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHCCCCCH----------------------------------------------HHHSTTC
T ss_pred             HhCCCCCCCCChHHHHHHHhcCCCCCc----------------------------------------------ccccCCC
Confidence            999999988777665544433211110                                              1112346


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       392 ~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      +.++.+||.+||+.||++||++.+++.|+|++.
T Consensus       247 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            778999999999999999999999999999863

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=2.7e-50  Score=392.67  Aligned_cols=249  Identities=18%  Similarity=0.233  Sum_probs=194.9

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec----chhhHHHHHHHHHHHHHHHhcCCCCcceEEec------
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRCVQIR------  159 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~------  159 (438)
                      ..++|++.+.||+|+||.||+|++..+|+.||||++..    .....+.+.+|+.+++.+..  +.|+|+++++      
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~--l~hpniv~~~~~~~~~  148 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG--IKNQKQAKVHLRFIFP  148 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTT--CCSHHHHHHHHCBCCC
T ss_pred             CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccc--cCCHHHHHHHhhhhhh
Confidence            35789999999999999999999999999999999963    23345778899966555532  2345558888      


Q ss_pred             -ceeccCC-----------------eEEEEEccCCCCHHHHHHhcCCCCCC-------HHHHHHHHHHHHHHHHHHHhCC
Q 013678          160 -NWFDYRN-----------------HICIVFEKLGPSLYDFLRKNSYRSFP-------IDLVRELGRQLLESVAFMHELR  214 (438)
Q Consensus       160 -~~~~~~~-----------------~~~lv~e~~~~~L~~~l~~~~~~~l~-------~~~~~~i~~qi~~aL~~LH~~~  214 (438)
                       +++++.+                 ..||||||++|+|.+++....  .++       +..+..++.||+.||+|||++|
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~--~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  226 (377)
T 3byv_A          149 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL--SHSSTHKSLVHHARLQLTLQVIRLLASLHHYG  226 (377)
T ss_dssp             SEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHH--HTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhcc--ccccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence             5555443                 389999999889999998643  244       4788889999999999999999


Q ss_pred             ceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCC-
Q 013678          215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-  293 (438)
Q Consensus       215 ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-  293 (438)
                      |+||||||+|||++.++                           .+||+|||++...........| +.|+|||++.+. 
T Consensus       227 ivHrDikp~NIll~~~~---------------------------~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~  278 (377)
T 3byv_A          227 LVHTYLRPVDIVLDQRG---------------------------GVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRA  278 (377)
T ss_dssp             EECSCCCGGGEEECTTC---------------------------CEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHT
T ss_pred             eecCCCCHHHEEEcCCC---------------------------CEEEEechhheecCCcccCCCC-cCccChhhhcccc
Confidence            99999999999997655                           5677777777655444445678 999999999987 


Q ss_pred             ----------CCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCC
Q 013678          294 ----------GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD  363 (438)
Q Consensus       294 ----------~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  363 (438)
                                .++.++|||||||++|||++|..||.+.+.....                                    
T Consensus       279 ~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~------------------------------------  322 (377)
T 3byv_A          279 TISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGS------------------------------------  322 (377)
T ss_dssp             STHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCS------------------------------------
T ss_pred             cccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccch------------------------------------
Confidence                      7999999999999999999999999654321110                                    


Q ss_pred             CCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          364 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                                        .........+++++.+||.+||+.||++|||+.|+++||||++
T Consensus       323 ------------------~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          323 ------------------EWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             ------------------GGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             ------------------hhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence                              0011112456779999999999999999999999999999975

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=3.1e-48  Score=363.86  Aligned_cols=263  Identities=30%  Similarity=0.520  Sum_probs=218.8

Q ss_pred             cCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           86 IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      ....+.++|++.+.||+|+||.||+|++..+++.||||++....   ...+.+.+|+.+++.++|+||     +++++++
T Consensus        16 ~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~   90 (287)
T 2wei_A           16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI-----MKLFEIL   90 (287)
T ss_dssp             HTHHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTB-----CCEEEEE
T ss_pred             HHHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCc-----cEEEEEE
Confidence            34566789999999999999999999999999999999986532   345678899999999988776     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      .+.+..++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+||+++.++          
T Consensus        91 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~----------  158 (287)
T 2wei_A           91 EDSSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE----------  158 (287)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS----------
T ss_pred             eCCCeEEEEEEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCC----------
Confidence            9999999999999 999999987664  699999999999999999999999999999999999996543          


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                    ....+||+|||++.......  ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.
T Consensus       159 --------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~  223 (287)
T 2wei_A          159 --------------KDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFY  223 (287)
T ss_dssp             --------------TTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             --------------CcccEEEeccCcceeecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCC
Confidence                          23468899999887654332  23468999999999876 48999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      +.+..+....+.......+                                              ......+++++.+||
T Consensus       224 ~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li  257 (287)
T 2wei_A          224 GKNEYDILKRVETGKYAFD----------------------------------------------LPQWRTISDDAKDLI  257 (287)
T ss_dssp             CSSHHHHHHHHHHCCCCCC----------------------------------------------SGGGTTSCHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCCCCC----------------------------------------------chhhhhcCHHHHHHH
Confidence            8777665555443211110                                              011234577899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          400 QGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      .+||+.||++|||+.|+|+||||++..
T Consensus       258 ~~~l~~dp~~Rps~~ell~hp~~~~~~  284 (287)
T 2wei_A          258 RKMLTFHPSLRITATQCLEHPWIQKYS  284 (287)
T ss_dssp             HHHTCSSGGGSCCHHHHHHSHHHHHHC
T ss_pred             HHHcccChhhCcCHHHHhcCHHHhccc
Confidence            999999999999999999999997643

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=2.5e-48  Score=362.07  Aligned_cols=257  Identities=22%  Similarity=0.388  Sum_probs=208.5

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      +.++|++.+.||+|+||.||+|.+..+++.||||++....  ...+.+.+|+.+++.++|+|+     +++++++.+++.
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~   79 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV-----VKFYGHRREGNI   79 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTB-----CCEEEEEEETTE
T ss_pred             eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCc-----eeeeeEEEcCCE
Confidence            3468999999999999999999999999999999986432  345778899999999888776     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      .|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+||+++.++               
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~---------------  142 (276)
T 2yex_A           80 QYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD---------------  142 (276)
T ss_dssp             EEEEEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC---------------
T ss_pred             EEEEEEecCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCC---------------
Confidence            99999999 889999986543  699999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCC-CcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                  .++|+|||.+......     .....||..|+|||++.+..+ +.++|||||||++|+|++|..||..
T Consensus       143 ------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  210 (276)
T 2yex_A          143 ------------NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ  210 (276)
T ss_dssp             ------------CEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSC
T ss_pred             ------------CEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence                        4677777766543211     233578999999999988765 7899999999999999999999976


Q ss_pred             CChHHH-HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          321 HENLEH-LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       321 ~~~~~~-~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      ...... ...+.....                                                .......++..+.+||
T Consensus       211 ~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~~li  242 (276)
T 2yex_A          211 PSDSCQEYSDWKEKKT------------------------------------------------YLNPWKKIDSAPLALL  242 (276)
T ss_dssp             SCTTSHHHHHHHTTCT------------------------------------------------TSTTGGGSCHHHHHHH
T ss_pred             CchHHHHHHHhhhccc------------------------------------------------ccCchhhcCHHHHHHH
Confidence            544221 111110000                                                0001124567899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          400 QGLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      .+||+.||++|||+.|+++||||++....
T Consensus       243 ~~~l~~~p~~Rps~~~il~~~~~~~~~~~  271 (276)
T 2yex_A          243 HKILVENPSARITIPDIKKDRWYNKPLKK  271 (276)
T ss_dssp             HHHSCSSTTTSCCHHHHTTCTTTTCCCC-
T ss_pred             HHHCCCCchhCCCHHHHhcCccccChhhc
Confidence            99999999999999999999999987654

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=7.2e-48  Score=363.84  Aligned_cols=266  Identities=24%  Similarity=0.408  Sum_probs=212.3

Q ss_pred             eeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecce
Q 013678           83 VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (438)
Q Consensus        83 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~  161 (438)
                      .+..+....++|++++.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.++..+.|+||     ++++++
T Consensus        10 ~~~~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~   84 (302)
T 2j7t_A           10 HVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI-----VKLLGA   84 (302)
T ss_dssp             CCBSSSCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTB-----CCEEEE
T ss_pred             ccccccCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCE-----eeeeee
Confidence            34445567789999999999999999999999999999999986532 345778899999999988777     999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                      +...+..++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++         
T Consensus        85 ~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~---------  154 (302)
T 2j7t_A           85 YYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG---------  154 (302)
T ss_dssp             EECC-CEEEEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTS---------
T ss_pred             eeeCCeEEEEEEeCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCC---------
Confidence            99999999999999 889999987643 4699999999999999999999999999999999999997665         


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccC---CCCcccccCCCcchhHHHh-----CCCCCcchhHHHHHHHHHHHH
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELC  312 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~ell  312 (438)
                                        .++|+|||++....   .......||..|+|||++.     +..++.++|||||||++|+|+
T Consensus       155 ------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~  216 (302)
T 2j7t_A          155 ------------------DIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA  216 (302)
T ss_dssp             ------------------CEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHH
T ss_pred             ------------------CEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHh
Confidence                              46666666553211   1122347899999999984     567899999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCch
Q 013678          313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  392 (438)
Q Consensus       313 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (438)
                      +|..||...+.......+.....+.                                               ......++
T Consensus       217 ~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~  249 (302)
T 2j7t_A          217 QIEPPHHELNPMRVLLKIAKSDPPT-----------------------------------------------LLTPSKWS  249 (302)
T ss_dssp             HSSCTTTTSCHHHHHHHHHHSCCCC-----------------------------------------------CSSGGGSC
T ss_pred             cCCCCCccCCHHHHHHHHhccCCcc-----------------------------------------------cCCccccC
Confidence            9999998877665544433211000                                               00112346


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          393 GDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       393 ~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      ..+.+||.+||+.||++|||+.++++||||++....
T Consensus       250 ~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~  285 (302)
T 2j7t_A          250 VEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSN  285 (302)
T ss_dssp             HHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCCC
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHhcChHHhhhccc
Confidence            689999999999999999999999999999986543

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=2.5e-48  Score=372.78  Aligned_cols=267  Identities=27%  Similarity=0.435  Sum_probs=185.9

Q ss_pred             CccCCceEEEe-eeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHH-HHHHHHhcCCCCcceEEecceecc-
Q 013678           88 ENLTPRCKILS-KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEID-VLQRLARHDIGGTRCVQIRNWFDY-  164 (438)
Q Consensus        88 ~~~~~~y~~~~-~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~-~l~~l~~~~i~~~~iv~~~~~~~~-  164 (438)
                      ..+.++|++++ .||+|+||.||+|.+..+++.||||++.......    +|+. .++.+.|+|+     +++++++.. 
T Consensus        24 ~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~e~~~~~~~~~h~~i-----~~~~~~~~~~   94 (336)
T 3fhr_A           24 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKAR----QEVDHHWQASGGPHI-----VCILDVYENM   94 (336)
T ss_dssp             SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHH----HHHHHHHHHTTSTTB-----CCEEEEEEEE
T ss_pred             ccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHH----HHHHHHHHhcCCCCh-----HHHHHHHhhc
Confidence            45678999976 5999999999999999999999999997643322    2333 3445556655     888888765 


Q ss_pred             ---CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          165 ---RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       165 ---~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                         +..+++||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++         
T Consensus        95 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~---------  165 (336)
T 3fhr_A           95 HHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKE---------  165 (336)
T ss_dssp             ETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS---------
T ss_pred             cCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecC---------
Confidence               45699999999 88999999887656799999999999999999999999999999999999997543         


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                     ....+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       166 ---------------~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  230 (336)
T 3fhr_A          166 ---------------KDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFY  230 (336)
T ss_dssp             ---------------TTCCEEECCCTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred             ---------------CCceEEEeccccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence                           2346899999988765433 234578999999999988889999999999999999999999997


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      ..........+......                    ...                      .........++.++.+||
T Consensus       231 ~~~~~~~~~~~~~~~~~--------------------~~~----------------------~~~~~~~~~~~~~~~~li  268 (336)
T 3fhr_A          231 SNTGQAISPGMKRRIRL--------------------GQY----------------------GFPNPEWSEVSEDAKQLI  268 (336)
T ss_dssp             --------------------------------------------------------------CCCTTTSTTCCHHHHHHH
T ss_pred             CccchhhhhhHHHhhhc--------------------ccc----------------------ccCchhhccCCHHHHHHH
Confidence            65443321111110000                    000                      000111235678999999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          400 QGLLRYDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      .+||+.||++|||+.|+|+||||++....+
T Consensus       269 ~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~  298 (336)
T 3fhr_A          269 RLLLKTDPTERLTITQFMNHPWINQSMVVP  298 (336)
T ss_dssp             HHHSCSSGGGSCCHHHHHHSHHHHTGGGSC
T ss_pred             HHHCCCChhHCcCHHHHhcCccccccccCC
Confidence            999999999999999999999998865444

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=8.4e-48  Score=363.71  Aligned_cols=256  Identities=26%  Similarity=0.412  Sum_probs=214.2

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ..++|++++.||+|+||.||+|.+..+++.||||++...  ....+.+.+|+.+++.+.|+++     +++++++.+.+.
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~   94 (303)
T 3a7i_A           20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV-----TKYYGSYLKDTK   94 (303)
T ss_dssp             GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTB-----CCEEEEEEETTE
T ss_pred             hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCE-----eEEEEEEecCCe
Confidence            446799999999999999999999999999999999753  2345778899999999988777     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|+||||+ +++|.+++...   .+++..+..++.||+.||.|||++||+||||||+||+++.++               
T Consensus        95 ~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~---------------  156 (303)
T 3a7i_A           95 LWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG---------------  156 (303)
T ss_dssp             EEEEEECCTTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS---------------
T ss_pred             EEEEEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCC---------------
Confidence            99999999 88999998753   599999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                  .++|+|||++......   .....||..|+|||++.+..++.++|||||||++|+|++|..||.....
T Consensus       157 ------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  224 (303)
T 3a7i_A          157 ------------EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP  224 (303)
T ss_dssp             ------------CEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             ------------CEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH
Confidence                        5677777776544322   2335789999999999999999999999999999999999999987766


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      ......+....  .                                               ......++..+.+||.+||
T Consensus       225 ~~~~~~~~~~~--~-----------------------------------------------~~~~~~~~~~l~~li~~~l  255 (303)
T 3a7i_A          225 MKVLFLIPKNN--P-----------------------------------------------PTLEGNYSKPLKEFVEACL  255 (303)
T ss_dssp             HHHHHHHHHSC--C-----------------------------------------------CCCCSSCCHHHHHHHHHHC
T ss_pred             HHHHHHhhcCC--C-----------------------------------------------CCCccccCHHHHHHHHHHc
Confidence            55444332210  0                                               0112345678999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          404 RYDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      +.||++|||+.|+++||||.+.....
T Consensus       256 ~~dp~~Rps~~~ll~~~~~~~~~~~~  281 (303)
T 3a7i_A          256 NKEPSFRPTAKELLKHKFILRNAKKT  281 (303)
T ss_dssp             CSSGGGSCCHHHHTTCHHHHHHCCCG
T ss_pred             CCChhhCcCHHHHhhChhhhcCCCcc
Confidence            99999999999999999998765544

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=5.2e-48  Score=362.60  Aligned_cols=259  Identities=21%  Similarity=0.354  Sum_probs=191.6

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhh--H-HHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY--R-EAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~-~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ...++|++.+.||+|+||.||+|.+..+++.||+|+++.....  . +...++...++.+.|+     |++++++++.++
T Consensus         4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~-----~iv~~~~~~~~~   78 (290)
T 3fme_A            4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP-----FTVTFYGALFRE   78 (290)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCT-----TBCCEEEEEECS
T ss_pred             ccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCC-----eEEEEeeeeecc
Confidence            3457899999999999999999999999999999999753222  2 2222333334444554     559999999999


Q ss_pred             CeEEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEecCcccccCCccccc
Q 013678          166 NHICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      +..|+||||+.++|.+++..  .....+++..++.++.||+.||+|||++ ||+||||||+||+++.++           
T Consensus        79 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~-----------  147 (290)
T 3fme_A           79 GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG-----------  147 (290)
T ss_dssp             SSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTC-----------
T ss_pred             CCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC-----------
Confidence            99999999997799888764  2235799999999999999999999998 999999999999997655           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHH----hCCCCCcchhHHHHHHHHHHHHhCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVI----LGLGWNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~----~~~~~~~~~DiwSlG~il~elltg~~  316 (438)
                                      .+||+|||++.......  ....||+.|+|||++    .+..++.++|||||||++|+|++|..
T Consensus       148 ----------------~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~  211 (290)
T 3fme_A          148 ----------------QVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRF  211 (290)
T ss_dssp             ----------------CEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSC
T ss_pred             ----------------CEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCC
Confidence                            56777777665543322  224789999999997    45568999999999999999999999


Q ss_pred             CCCCCC-hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          317 LFQTHE-NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       317 pf~~~~-~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      ||.... ....+..+....  .+                                              ......+++++
T Consensus       212 p~~~~~~~~~~~~~~~~~~--~~----------------------------------------------~~~~~~~~~~~  243 (290)
T 3fme_A          212 PYDSWGTPFQQLKQVVEEP--SP----------------------------------------------QLPADKFSAEF  243 (290)
T ss_dssp             SSCCCSCHHHHHHHHHHSC--CC----------------------------------------------CCCTTTSCHHH
T ss_pred             CccccCchHHHHHHHhccC--CC----------------------------------------------CcccccCCHHH
Confidence            997633 222222221110  00                                              00112456789


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          396 IDLLQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      .+||.+||+.||++|||+.|+++||||+....
T Consensus       244 ~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~~  275 (290)
T 3fme_A          244 VDFTSQCLKKNSKERPTYPELMQHPFFTLHES  275 (290)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred             HHHHHHHhhcChhhCcCHHHHHhCcccccCcc
Confidence            99999999999999999999999999986543

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8e-48  Score=372.00  Aligned_cols=253  Identities=26%  Similarity=0.408  Sum_probs=202.1

Q ss_pred             CceEEEeeeeeecceEEEEEEEC---CCCcEEEEEEeecch-----hhHHHHHHHHHHHHHHH-hcCCCCcceEEeccee
Q 013678           92 PRCKILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWF  162 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~  162 (438)
                      ++|++.+.||+|+||.||+|++.   .+++.||||+++...     ...+.+.+|+.++..+. |++|     +++++++
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~~~  128 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL-----VTLHYAF  128 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTB-----CCEEEEE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCce-----eEEEEEE
Confidence            78999999999999999999984   588999999986422     33456778999999995 6665     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      ...+.++|||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++          
T Consensus       129 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~----------  196 (355)
T 1vzo_A          129 QTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG----------  196 (355)
T ss_dssp             EETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS----------
T ss_pred             eeCceEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC----------
Confidence            9999999999999 899999998764  699999999999999999999999999999999999997665          


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCC--CCCcchhHHHHHHHHHHHHhCC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~  315 (438)
                                       .+||+|||++......    ....+||+.|+|||++.+.  .++.++|||||||++|+|++|.
T Consensus       197 -----------------~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~  259 (355)
T 1vzo_A          197 -----------------HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA  259 (355)
T ss_dssp             -----------------CEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSS
T ss_pred             -----------------cEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCC
Confidence                             4666666666543211    1235799999999999864  4789999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHH-HhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          316 ALFQTHENLEHLAMMER-VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      .||...........+.. ....                                               ....+..++..
T Consensus       260 ~pf~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~  292 (355)
T 1vzo_A          260 SPFTVDGEKNSQAEISRRILKS-----------------------------------------------EPPYPQEMSAL  292 (355)
T ss_dssp             CTTSCTTSCCCHHHHHHHHHHC-----------------------------------------------CCCCCTTSCHH
T ss_pred             CCCccCCccchHHHHHHHHhcc-----------------------------------------------CCCCCcccCHH
Confidence            99975432211111111 1000                                               00112345678


Q ss_pred             HHHHHHHccccCCCCCC-----CHHHHhcCCCCCCC
Q 013678          395 LIDLLQGLLRYDPAERL-----KAREALRHPFFTRD  425 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rp-----ta~ell~hp~f~~~  425 (438)
                      +.+||.+||+.||++||     |++|+++||||++.
T Consensus       293 ~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          293 AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             HHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence            99999999999999999     99999999999863

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.1e-47  Score=364.76  Aligned_cols=258  Identities=26%  Similarity=0.436  Sum_probs=207.0

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      +...++|++.+.||+|+||.||+|.+..+|+.||||++.... ..+.+.+|+.+++.+.|+|+     +++++++...+.
T Consensus        25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~   98 (314)
T 3com_A           25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHV-----VKYYGSYFKNTD   98 (314)
T ss_dssp             -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTB-----CCEEEEEEETTE
T ss_pred             hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCC-----ccEEEEEEeCCE
Confidence            445678999999999999999999999999999999997533 34668899999999988776     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++               
T Consensus        99 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~---------------  162 (314)
T 3com_A           99 LWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEG---------------  162 (314)
T ss_dssp             EEEEEECCTTEEHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC---------------
T ss_pred             EEEEeecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCC---------------
Confidence            99999999 889999997433 4799999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                  .++|+|||.+......   .....||..|+|||++.+..++.++|||||||++|+|++|..||...+.
T Consensus       163 ------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  230 (314)
T 3com_A          163 ------------HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP  230 (314)
T ss_dssp             ------------CEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             ------------CEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh
Confidence                        4677777776544322   2335789999999999998999999999999999999999999987766


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      ......+.....  +                                             .......++..+.+||.+||
T Consensus       231 ~~~~~~~~~~~~--~---------------------------------------------~~~~~~~~~~~l~~li~~~l  263 (314)
T 3com_A          231 MRAIFMIPTNPP--P---------------------------------------------TFRKPELWSDNFTDFVKQCL  263 (314)
T ss_dssp             HHHHHHHHHSCC--C---------------------------------------------CCSSGGGSCHHHHHHHHHHT
T ss_pred             HHHHHHHhcCCC--c---------------------------------------------ccCCcccCCHHHHHHHHHHc
Confidence            554433322100  0                                             00011234678999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCC
Q 013678          404 RYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +.||.+|||+.++++||||++..
T Consensus       264 ~~dp~~Rpt~~~ll~~~~~~~~~  286 (314)
T 3com_A          264 VKSPEQRATATQLLQHPFVRSAK  286 (314)
T ss_dssp             CSCTTTSCCHHHHTTSHHHHTCC
T ss_pred             cCChhhCcCHHHHHhCHHHhcCC
Confidence            99999999999999999998764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=8.2e-47  Score=355.83  Aligned_cols=258  Identities=21%  Similarity=0.250  Sum_probs=209.0

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccC
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ++.+.++|++.+.||+|+||.||+|.+..+++.||||++... ...+.+.+|+.+++.+ .|+++     +++++++.+.
T Consensus         5 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~e~~~~~~l~~~~~i-----~~~~~~~~~~   78 (298)
T 1csn_A            5 NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR-SDAPQLRDEYRTYKLLAGCTGI-----PNVYYFGQEG   78 (298)
T ss_dssp             -CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC-TTSCCHHHHHHHHHHTTTCTTC-----CCEEEEEEET
T ss_pred             CcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC-CccHHHHHHHHHHHHHhcCCCC-----CeEEeecCCC
Confidence            566788999999999999999999999999999999998653 2345678899999999 55555     8888999999


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      ...++||||++++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.             
T Consensus        79 ~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~-------------  144 (298)
T 1csn_A           79 LHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNS-------------  144 (298)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSS-------------
T ss_pred             ceeEEEEEecCCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCC-------------
Confidence            9999999999999999998754 46999999999999999999999999999999999999977652             


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCC----------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~  315 (438)
                               .....+||+|||++......          .....||+.|+|||++.+..++.++|||||||++|+|++|.
T Consensus       145 ---------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~  215 (298)
T 1csn_A          145 ---------KNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGS  215 (298)
T ss_dssp             ---------TTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             ---------CCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCC
Confidence                     12345888888888654332          23357999999999999999999999999999999999999


Q ss_pred             CCCCCCC---hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCch
Q 013678          316 ALFQTHE---NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA  392 (438)
Q Consensus       316 ~pf~~~~---~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (438)
                      .||.+.+   .......+.......+                                             .......++
T Consensus       216 ~pf~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~  250 (298)
T 1csn_A          216 LPWQGLKAATNKQKYERIGEKKQSTP---------------------------------------------LRELCAGFP  250 (298)
T ss_dssp             CTTSSCCSCCHHHHHHHHHHHHHHSC---------------------------------------------HHHHTTTSC
T ss_pred             CCcchhhccccHHHHHHHHhhccCcc---------------------------------------------HHHHHhhCc
Confidence            9998743   2333333222111110                                             111223567


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          393 GDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       393 ~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      +++.+||.+||+.||++|||++++++
T Consensus       251 ~~l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          251 EEFYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             HHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHHHhcCCcccCCCHHHHHH
Confidence            79999999999999999999999875

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=4.9e-47  Score=362.96  Aligned_cols=255  Identities=22%  Similarity=0.269  Sum_probs=205.2

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccCCe
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      .+.++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+.+++.+ .|+++     +++++++.+++.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i-----~~~~~~~~~~~~   79 (330)
T 2izr_A            6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGI-----PQVYYFGPCGKY   79 (330)
T ss_dssp             EETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTS-----CCEEEEEEETTE
T ss_pred             EEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCC-----CEEEEEEecCCc
Confidence            35688999999999999999999999999999999987532 234688999999999 77777     999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      .++||||++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.               
T Consensus        80 ~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~---------------  143 (330)
T 2izr_A           80 NAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGN---------------  143 (330)
T ss_dssp             EEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGG---------------
T ss_pred             cEEEEEeCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCC---------------
Confidence            99999999999999998753 47999999999999999999999999999999999999987663               


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCC----------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                             .....+||+|||++......          .....||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus       144 -------~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~P  216 (330)
T 2izr_A          144 -------KTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP  216 (330)
T ss_dssp             -------TCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             -------CCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCC
Confidence                   11223777788877653322          1346899999999999999999999999999999999999999


Q ss_pred             CCCCChHH---HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          318 FQTHENLE---HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       318 f~~~~~~~---~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      |.+.+..+   .+..+.......|.                                             .......+ +
T Consensus       217 f~~~~~~~~~~~~~~i~~~~~~~~~---------------------------------------------~~~~~~~p-~  250 (330)
T 2izr_A          217 WQGLKADTLKERYQKIGDTKRATPI---------------------------------------------EVLCENFP-E  250 (330)
T ss_dssp             TTTCCCSSHHHHHHHHHHHHHHSCH---------------------------------------------HHHTTTCH-H
T ss_pred             ccccccccHHHHHHHHHhhhccCCH---------------------------------------------HHHhccCh-H
Confidence            98754332   22222221111110                                             01112234 8


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhc
Q 013678          395 LIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      +.+||.+||+.||.+||++++|++
T Consensus       251 ~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          251 MATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCCHHHHHH
Confidence            999999999999999999988876

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=1.4e-47  Score=361.55  Aligned_cols=272  Identities=24%  Similarity=0.347  Sum_probs=197.0

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc-----
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-----  164 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-----  164 (438)
                      +.++|++++.||+|+||.||+|++..+++.||||++.......+.+.+|+.+++.++|+|+     +++++++.+     
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~   78 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV-----VRYYAAWLERRNFV   78 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEECCCCC
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHH-----HHHHHHHHhhcchh
Confidence            4578999999999999999999999999999999998766667788999999999988777     888887643     


Q ss_pred             --------CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccccc
Q 013678          165 --------RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV  235 (438)
Q Consensus       165 --------~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl  235 (438)
                              .+..|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.++|
T Consensus        79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl  157 (303)
T 1zy4_A           79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKI  157 (303)
T ss_dssp             C------CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEE
T ss_pred             hhhcccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEE
Confidence                    46799999999 899999998654 46888999999999999999999999999999999999987775555


Q ss_pred             CCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhC
Q 013678          236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       236 ~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg  314 (438)
                      +|||++.........         ..+ +-..............||..|+|||++.+. .++.++|||||||++|+|++ 
T Consensus       158 ~dfg~~~~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-  226 (303)
T 1zy4_A          158 GDFGLAKNVHRSLDI---------LKL-DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY-  226 (303)
T ss_dssp             CCCCCCSCTTC-----------------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS-
T ss_pred             eeCcchhhcccccch---------hcc-ccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh-
Confidence            555543322111000         000 000000000112235789999999999875 68999999999999999998 


Q ss_pred             CCCCCCCCh-HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchh
Q 013678          315 EALFQTHEN-LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  393 (438)
Q Consensus       315 ~~pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (438)
                        ||..... ......+......+|                        .                      ......+.
T Consensus       227 --p~~~~~~~~~~~~~~~~~~~~~~------------------------~----------------------~~~~~~~~  258 (303)
T 1zy4_A          227 --PFSTGMERVNILKKLRSVSIEFP------------------------P----------------------DFDDNKMK  258 (303)
T ss_dssp             --CCSSHHHHHHHHHHHHSTTCCCC------------------------T----------------------TCCTTTSH
T ss_pred             --ccCCchhHHHHHHhccccccccC------------------------c----------------------cccccchH
Confidence              5543211 122222211111111                        0                      11234456


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      .+.+||.+||+.||++|||+.++++||||+...
T Consensus       259 ~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (303)
T 1zy4_A          259 VEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKH  291 (303)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCC
T ss_pred             HHHHHHHHHHhcCcccCcCHHHHhCCCCcCCCC
Confidence            789999999999999999999999999998653

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=6.4e-47  Score=358.63  Aligned_cols=256  Identities=21%  Similarity=0.288  Sum_probs=201.6

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ....+|++.++||+|+||.||+|++  +++.||||++....   ...+.+.+|+.++++++|+||     +++++++.+.
T Consensus        34 i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~  106 (309)
T 3p86_A           34 IPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI-----VLFMGAVTQP  106 (309)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEECST
T ss_pred             CChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEEC
Confidence            3357899999999999999999986  57889999986532   334568899999999988877     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEecCcccccCCcccc
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSY-RSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      +.+++||||+ +++|.+++..... ..+++..+..++.||+.||+|||++|  |+||||||+|||++.++          
T Consensus       107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~----------  176 (309)
T 3p86_A          107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKY----------  176 (309)
T ss_dssp             TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTC----------
T ss_pred             CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCC----------
Confidence            9999999999 8999999986431 23899999999999999999999999  99999999999997655          


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                       .+||+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       177 -----------------~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf  239 (309)
T 3p86_A          177 -----------------TVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW  239 (309)
T ss_dssp             -----------------CEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTT
T ss_pred             -----------------cEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                             5677777777643332   23357999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      .+.+..+....+......                                                ...+..+++++.+|
T Consensus       240 ~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~l~~l  271 (309)
T 3p86_A          240 GNLNPAQVVAAVGFKCKR------------------------------------------------LEIPRNLNPQVAAI  271 (309)
T ss_dssp             TTSCHHHHHHHHHHSCCC------------------------------------------------CCCCTTSCHHHHHH
T ss_pred             CCCCHHHHHHHHHhcCCC------------------------------------------------CCCCccCCHHHHHH
Confidence            887766655444221110                                                01223557789999


Q ss_pred             HHHccccCCCCCCCHHHHhc--CCCCCCCC
Q 013678          399 LQGLLRYDPAERLKAREALR--HPFFTRDV  426 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~--hp~f~~~~  426 (438)
                      |.+||+.||++|||+.++++  ++++++..
T Consensus       272 i~~~l~~dP~~Rps~~~ll~~L~~~~~~~~  301 (309)
T 3p86_A          272 IEGCWTNEPWKRPSFATIMDLLRPLIKSAV  301 (309)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence            99999999999999999987  56665543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=3.2e-47  Score=353.45  Aligned_cols=245  Identities=25%  Similarity=0.372  Sum_probs=206.2

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      ++|++.+.||+|+||.||+|.+. +++.||+|++.......+.+.+|+.++++++|+||     +++++++.+.+..|+|
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv   83 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL-----VQLYGVCLEQAPICLV   83 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTB-----CCEEEEECSSSSEEEE
T ss_pred             hhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCE-----eeEEEEEecCCceEEE
Confidence            68999999999999999999986 56779999998766666789999999999988777     9999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++                   
T Consensus        84 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~-------------------  143 (269)
T 4hcu_A           84 FEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ-------------------  143 (269)
T ss_dssp             EECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGG-------------------
T ss_pred             EEeCCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCC-------------------
Confidence            9999 899999997654 4699999999999999999999999999999999999997665                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  325 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~  325 (438)
                              .++|+|||++......    .....+|..|+|||++.+..++.++|||||||++|+|++ |..||...+..+
T Consensus       144 --------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~  215 (269)
T 4hcu_A          144 --------VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE  215 (269)
T ss_dssp             --------CEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             --------CEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH
Confidence                    4677777776544322    122456778999999999999999999999999999999 999998877766


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+......                                                 ..+...++++.+||.+||+.
T Consensus       216 ~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~li~~~l~~  246 (269)
T 4hcu_A          216 VVEDISTGFRL-------------------------------------------------YKPRLASTHVYQIMNHCWRE  246 (269)
T ss_dssp             HHHHHHTTCCC-------------------------------------------------CCCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHhcCccC-------------------------------------------------CCCCcCCHHHHHHHHHHccC
Confidence            55544322110                                                 11123467899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q 013678          406 DPAERLKAREALRH  419 (438)
Q Consensus       406 dP~~Rpta~ell~h  419 (438)
                      ||++|||+.|+++|
T Consensus       247 ~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          247 RPEDRPAFSRLLRQ  260 (269)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             CcccCcCHHHHHHH
Confidence            99999999999975

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=2.5e-47  Score=355.95  Aligned_cols=255  Identities=22%  Similarity=0.360  Sum_probs=209.3

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEeccee--ccC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF--DYR  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~--~~~  165 (438)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++...   ....+.+.+|+.+++.++|+||     +++++++  ...
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~   79 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI-----VRYYDRIIDRTN   79 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEEEGGG
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCC-----CeEEEEEecCCC
Confidence            46899999999999999999999999999999999743   3445678899999999988777     9999977  446


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC-----ceecCCCCCcEEEecCcccccCC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELR-----LIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-----ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      +.+++||||+ +++|.+++....  ...+++..++.++.||+.||+|||++|     |+||||||+||+++.++      
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~------  153 (279)
T 2w5a_A           80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ------  153 (279)
T ss_dssp             TEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSS------
T ss_pred             ceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCC------
Confidence            7899999999 889999997532  245999999999999999999999999     99999999999997655      


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhC
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg  314 (438)
                                           .+||+|||.+.......   ....||..|+|||++.+..++.++|||||||++|+|++|
T Consensus       154 ---------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  212 (279)
T 2w5a_A          154 ---------------------NVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCAL  212 (279)
T ss_dssp             ---------------------CEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHS
T ss_pred             ---------------------CEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHC
Confidence                                 56777777776544332   234789999999999999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      ..||...+..+....+.....  +                                               .....++.+
T Consensus       213 ~~p~~~~~~~~~~~~i~~~~~--~-----------------------------------------------~~~~~~~~~  243 (279)
T 2w5a_A          213 MPPFTAFSQKELAGKIREGKF--R-----------------------------------------------RIPYRYSDE  243 (279)
T ss_dssp             SCSSCCSSHHHHHHHHHHTCC--C-----------------------------------------------CCCTTSCHH
T ss_pred             CCCCcccCHHHHHHHHhhccc--c-----------------------------------------------cCCcccCHH
Confidence            999988776555444432110  0                                               112245678


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          395 LIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +.+||.+||+.||++|||+.|+++|+|+.+..
T Consensus       244 l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  275 (279)
T 2w5a_A          244 LNEIITRMLNLKDYHRPSVEEILENPLILEHH  275 (279)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred             HHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence            99999999999999999999999999998764

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1e-47  Score=372.89  Aligned_cols=258  Identities=19%  Similarity=0.275  Sum_probs=210.9

Q ss_pred             CccCCceEEEeeeeeecceEEEEEE-----ECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecc
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECF-----DNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~  160 (438)
                      +...++|++.+.||+|+||.||+|+     +..+++.||||+++..  ......+.+|+.+++.++|+||     +++++
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~~~~  141 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI-----VRCIG  141 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTB-----CCEEE
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCC-----CeEEE
Confidence            4445889999999999999999999     4567889999998642  3445568889999999988877     99999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSY-----RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  234 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  234 (438)
                      ++.+.+..++||||| +++|.+++.....     ..+++..++.++.||+.||+|||++||+||||||+|||++.+|   
T Consensus       142 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~---  218 (367)
T 3l9p_A          142 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG---  218 (367)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS---
T ss_pred             EEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCC---
Confidence            999999999999999 9999999986431     3589999999999999999999999999999999999997654   


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccC-----CCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHH
Q 013678          235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH-----QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  309 (438)
Q Consensus       235 l~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  309 (438)
                                           ....+||+|||++....     .......||+.|+|||++.+..++.++|||||||++|
T Consensus       219 ---------------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~  277 (367)
T 3l9p_A          219 ---------------------PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW  277 (367)
T ss_dssp             ---------------------TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             ---------------------CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHH
Confidence                                 23357888888876421     1223357899999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhcc
Q 013678          310 ELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  388 (438)
Q Consensus       310 ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (438)
                      ||++ |..||.+.+..+....+......                                                 ...
T Consensus       278 ellt~g~~pf~~~~~~~~~~~i~~~~~~-------------------------------------------------~~~  308 (367)
T 3l9p_A          278 EIFSLGYMPYPSKSNQEVLEFVTSGGRM-------------------------------------------------DPP  308 (367)
T ss_dssp             HHHTTSCCSSTTCCHHHHHHHHHTTCCC-------------------------------------------------CCC
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHcCCCC-------------------------------------------------CCC
Confidence            9998 99999988776655544321100                                                 112


Q ss_pred             CCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q 013678          389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT  423 (438)
Q Consensus       389 ~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~  423 (438)
                      ..++..+.+||.+||+.||++|||+.+|++|.|+-
T Consensus       309 ~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          309 KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            34567899999999999999999999999987653

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=1.2e-47  Score=365.67  Aligned_cols=258  Identities=25%  Similarity=0.415  Sum_probs=208.0

Q ss_pred             eeeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh-------hHHHHHHHHHHHHHHHhcCCCCcc
Q 013678           82 YVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLARHDIGGTR  154 (438)
Q Consensus        82 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~i~~~~  154 (438)
                      .+...++.+.++|++.+.||+|+||.||+|.+..+++.||||++.....       ..+.+.+|+.+++.+.|   .++|
T Consensus        33 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~~~  109 (320)
T 3a99_A           33 APGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS---GFSG  109 (320)
T ss_dssp             -------CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS---SSCS
T ss_pred             CcccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhcc---CCCC
Confidence            3455667888999999999999999999999999999999999975321       22456789999999976   2345


Q ss_pred             eEEecceeccCCeEEEEEccC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe-cCc
Q 013678          155 CVQIRNWFDYRNHICIVFEKL-G-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV-SAE  231 (438)
Q Consensus       155 iv~~~~~~~~~~~~~lv~e~~-~-~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~-~~~  231 (438)
                      ++++++++...+..++|||++ + ++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++ .++
T Consensus       110 i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~  187 (320)
T 3a99_A          110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG  187 (320)
T ss_dssp             BCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT
T ss_pred             ceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCC
Confidence            599999999999999999999 4 89999998764  799999999999999999999999999999999999997 334


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhCCCC-CcchhHHHHHHHHH
Q 013678          232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILV  309 (438)
Q Consensus       232 ~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~  309 (438)
                                                 .+||+|||++...... .....||+.|+|||++.+..+ +.++|||||||++|
T Consensus       188 ---------------------------~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~  240 (320)
T 3a99_A          188 ---------------------------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY  240 (320)
T ss_dssp             ---------------------------EEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHH
T ss_pred             ---------------------------CEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHH
Confidence                                       5777777777654433 233578999999999987765 68899999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccC
Q 013678          310 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD  389 (438)
Q Consensus       310 elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (438)
                      +|++|..||.....      +..  +.                                                .....
T Consensus       241 el~~g~~pf~~~~~------~~~--~~------------------------------------------------~~~~~  264 (320)
T 3a99_A          241 DMVCGDIPFEHDEE------IIR--GQ------------------------------------------------VFFRQ  264 (320)
T ss_dssp             HHHHSSCSCCSHHH------HHH--CC------------------------------------------------CCCSS
T ss_pred             HHHHCCCCCCChhh------hhc--cc------------------------------------------------ccccc
Confidence            99999999964211      000  00                                                00123


Q ss_pred             CchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       390 ~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      .+++++.+||.+||+.||++|||++|+++||||++...
T Consensus       265 ~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  302 (320)
T 3a99_A          265 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL  302 (320)
T ss_dssp             CCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccC
Confidence            45678999999999999999999999999999998653

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=3.9e-47  Score=362.72  Aligned_cols=248  Identities=22%  Similarity=0.282  Sum_probs=203.5

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCc---EEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      ...++|++.+.||+|+||.||+|.+..+++   .||||+++..  ....+.+.+|+.+++.++|+||     +++++++.
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~  120 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI-----IRLEGVVT  120 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEC
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCC-----CcEEEEEE
Confidence            445789999999999999999999986554   5999999753  3445678899999999988777     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      +++..|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++           
T Consensus       121 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~-----------  188 (325)
T 3kul_A          121 RGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNL-----------  188 (325)
T ss_dssp             GGGCCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC-----------
T ss_pred             eCCccEEEeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCC-----------
Confidence            999999999999 999999997653 4699999999999999999999999999999999999997655           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE  315 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~  315 (438)
                                      .+||+|||++.......      ....+|..|+|||++.+..++.++|||||||++|+|++ |.
T Consensus       189 ----------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~  252 (325)
T 3kul_A          189 ----------------VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE  252 (325)
T ss_dssp             ----------------CEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             ----------------CEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCC
Confidence                            46667777665543221      11245778999999999899999999999999999999 99


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      .||.+....+....+.....                                                 ......+++.+
T Consensus       253 ~p~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~l  283 (325)
T 3kul_A          253 RPYWNMTNRDVISSVEEGYR-------------------------------------------------LPAPMGCPHAL  283 (325)
T ss_dssp             CTTTTSCHHHHHHHHHTTCC-------------------------------------------------CCCCTTCCHHH
T ss_pred             CCcccCCHHHHHHHHHcCCC-------------------------------------------------CCCCCCcCHHH
Confidence            99988877666555433210                                                 01123456789


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q 013678          396 IDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      .+||.+||..||++|||+.|+++
T Consensus       284 ~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          284 HQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHH
Confidence            99999999999999999999886

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=5.3e-47  Score=355.61  Aligned_cols=254  Identities=24%  Similarity=0.314  Sum_probs=208.4

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCC-------cEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecc
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKK-------ELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-------~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~  160 (438)
                      ...++|++.+.||+|+||.||+|++..++       ..||+|++.... ...+.+.+|+.+++.++|+||     +++++
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~   79 (289)
T 4fvq_A            5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHL-----VLNYG   79 (289)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTB-----CCEEE
T ss_pred             echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCE-----eEEEE
Confidence            34578999999999999999999998877       469999986543 455778899999999988877     99999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                      ++.+.+..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++..++.+++
T Consensus        80 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~  158 (289)
T 4fvq_A           80 VCVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPP  158 (289)
T ss_dssp             EECCTTCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred             EEEeCCCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccc
Confidence            999999999999999 899999998754 349999999999999999999999999999999999999998876666654


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCC-CC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGE-AL  317 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~-~p  317 (438)
                                         .+||+|||++...... ....||..|+|||++.+ ..++.++|||||||++|+|++|. .|
T Consensus       159 -------------------~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~  218 (289)
T 4fvq_A          159 -------------------FIKLSDPGISITVLPK-DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP  218 (289)
T ss_dssp             -------------------EEEECCCCSCTTTSCH-HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             -------------------eeeeccCcccccccCc-cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence                               4899999998765332 33578999999999988 66899999999999999999955 45


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |...+...... +......                                                  .....+.++.+
T Consensus       219 ~~~~~~~~~~~-~~~~~~~--------------------------------------------------~~~~~~~~l~~  247 (289)
T 4fvq_A          219 LSALDSQRKLQ-FYEDRHQ--------------------------------------------------LPAPKAAELAN  247 (289)
T ss_dssp             TTTSCHHHHHH-HHHTTCC--------------------------------------------------CCCCSSCTTHH
T ss_pred             ccccchHHHHH-HhhccCC--------------------------------------------------CCCCCCHHHHH
Confidence            54444333222 2111111                                                  11233567899


Q ss_pred             HHHHccccCCCCCCCHHHHhcC
Q 013678          398 LLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      ||.+||+.||++|||+.|+++|
T Consensus       248 li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          248 LINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHHH
Confidence            9999999999999999999975

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=9.1e-47  Score=350.18  Aligned_cols=247  Identities=20%  Similarity=0.295  Sum_probs=205.8

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ..++|++.+.||+|+||.||+|.+. ++..||+|+++......+.+.+|+.++..++|+||     +++++++.+.+..+
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~   79 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKL-----VKFYGVCSKEYPIY   79 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTB-----CCEEEEECSSSSEE
T ss_pred             chhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCE-----eeEEEEEccCCceE
Confidence            3578999999999999999999875 56779999998766667788999999999988777     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++                 
T Consensus        80 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~-----------------  141 (268)
T 3sxs_A           80 IVTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDL-----------------  141 (268)
T ss_dssp             EEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTC-----------------
T ss_pred             EEEEccCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCC-----------------
Confidence            999999 999999998754 3599999999999999999999999999999999999997655                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCCc----ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCh
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDHS----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN  323 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~  323 (438)
                                .++|+|||++........    ...+|..|+|||++.+..++.++|||||||++|+|++ |..||...+.
T Consensus       142 ----------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~  211 (268)
T 3sxs_A          142 ----------CVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN  211 (268)
T ss_dssp             ----------CEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred             ----------CEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh
Confidence                      466777776654433221    1345678999999999889999999999999999999 9999988777


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .+....+......                                                 ..+...++.+.+||.+||
T Consensus       212 ~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~l~~li~~~l  242 (268)
T 3sxs_A          212 SEVVLKVSQGHRL-------------------------------------------------YRPHLASDTIYQIMYSCW  242 (268)
T ss_dssp             HHHHHHHHTTCCC-------------------------------------------------CCCTTSCHHHHHHHHHTT
T ss_pred             HHHHHHHHcCCCC-------------------------------------------------CCCCcChHHHHHHHHHHc
Confidence            6655444321100                                                 011234668999999999


Q ss_pred             ccCCCCCCCHHHHhcC
Q 013678          404 RYDPAERLKAREALRH  419 (438)
Q Consensus       404 ~~dP~~Rpta~ell~h  419 (438)
                      +.||++|||+.|+++|
T Consensus       243 ~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          243 HELPEKRPTFQQLLSS  258 (268)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             CCChhhCcCHHHHHHH
Confidence            9999999999999975

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=9.6e-48  Score=370.43  Aligned_cols=277  Identities=20%  Similarity=0.331  Sum_probs=214.0

Q ss_pred             ecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhh------------------HHHHHHHHHHHHHHH
Q 013678           85 AIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY------------------REAAMIEIDVLQRLA  146 (438)
Q Consensus        85 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------------------~~~~~~E~~~l~~l~  146 (438)
                      ..++...++|++.+.||+|+||.||+|.+  +++.||||++......                  .+.+.+|+.++..++
T Consensus        24 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  101 (348)
T 2pml_X           24 KEKDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK  101 (348)
T ss_dssp             SSSCEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCC
T ss_pred             hhcccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCC
Confidence            34455668999999999999999999998  8999999999753221                  177889999999998


Q ss_pred             hcCCCCcceEEecceeccCCeEEEEEccC-CCCHHHH------HHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceec
Q 013678          147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDF------LRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHT  218 (438)
Q Consensus       147 ~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~------l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHr  218 (438)
                      |+|+     +++++++.+.+.+++||||+ +++|.++      +.......+++..++.++.||+.||.|||+ +||+||
T Consensus       102 h~~i-----~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~  176 (348)
T 2pml_X          102 NEYC-----LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHR  176 (348)
T ss_dssp             CTTB-----CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECC
T ss_pred             CCCc-----ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeec
Confidence            8776     99999999999999999999 8899998      655434679999999999999999999999 999999


Q ss_pred             CCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhCC-CCC
Q 013678          219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGL-GWN  296 (438)
Q Consensus       219 Dlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~  296 (438)
                      ||||+||+++.++                           .++|+|||.+...... .....||..|+|||++.+. .++
T Consensus       177 dl~p~Nil~~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  229 (348)
T 2pml_X          177 DVKPSNILMDKNG---------------------------RVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYN  229 (348)
T ss_dssp             CCCGGGEEECTTS---------------------------CEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEE
T ss_pred             CCChHhEEEcCCC---------------------------cEEEeccccccccccccccCCCCCcCccCchhhcCCCCCC
Confidence            9999999997655                           5777777777654322 2335789999999999887 566


Q ss_pred             c-chhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHH
Q 013678          297 Y-PCDLWSVGCILVELCSGEALFQTHEN-LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV  374 (438)
Q Consensus       297 ~-~~DiwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (438)
                      . ++|||||||++|+|++|..||..... .+....+.......|...                 ..+...          
T Consensus       230 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~-----------------~~~~~~----------  282 (348)
T 2pml_X          230 GAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDR-----------------NHFLYP----------  282 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSS-----------------SSSTTT----------
T ss_pred             cchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccch-----------------hhhhcc----------
Confidence            5 99999999999999999999987766 444444332211111100                 000000          


Q ss_pred             HHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                          ............++.++.+||.+||+.||.+|||+.|+++||||++..
T Consensus       283 ----~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~  330 (348)
T 2pml_X          283 ----LTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTN  330 (348)
T ss_dssp             ----TCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             ----ccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCC
Confidence                000000111245678999999999999999999999999999998753

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=8.1e-47  Score=366.82  Aligned_cols=248  Identities=18%  Similarity=0.312  Sum_probs=202.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEEC-------CCCcEEEEEEeecc--hhhHHHHHHHHHHHHHH-HhcCCCCcceEEecc
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDN-------EKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRN  160 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~  160 (438)
                      .++|++.+.||+|+||.||+|++.       .++..||||+++..  ....+.+.+|+.+++.+ +|+||     +++++
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnI-----v~~~~  154 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI-----INLLG  154 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTB-----CCEEE
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCE-----eeEEE
Confidence            478999999999999999999874       34567999999753  23456788999999999 77776     99999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  225 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  225 (438)
                      ++.+.+.+|+||||+ +++|.+++....              ...+++..+..++.||+.||+|||++||+||||||+||
T Consensus       155 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  234 (370)
T 2psq_A          155 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV  234 (370)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred             EEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhE
Confidence            999999999999999 899999998653              13589999999999999999999999999999999999


Q ss_pred             EEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchh
Q 013678          226 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCD  300 (438)
Q Consensus       226 li~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~D  300 (438)
                      |++.++                           .+||+|||++......     .....+|+.|+|||++.+..++.++|
T Consensus       235 ll~~~~---------------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  287 (370)
T 2psq_A          235 LVTENN---------------------------VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  287 (370)
T ss_dssp             EECTTC---------------------------CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHH
T ss_pred             EECCCC---------------------------CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHH
Confidence            997665                           4666666666543321     12245678999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhcc
Q 013678          301 LWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR  379 (438)
Q Consensus       301 iwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (438)
                      ||||||++|||++ |..||.+....+....+....                       .                     
T Consensus       288 vwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-----------------------~---------------------  323 (370)
T 2psq_A          288 VWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-----------------------R---------------------  323 (370)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-----------------------C---------------------
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC-----------------------C---------------------
Confidence            9999999999999 999998766554443332110                       0                     


Q ss_pred             chhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       380 ~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                           ...+..++.++.+||.+||+.||++|||+.|++++
T Consensus       324 -----~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          324 -----MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 01123456789999999999999999999999864

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=9.7e-48  Score=362.95  Aligned_cols=274  Identities=23%  Similarity=0.355  Sum_probs=187.0

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ..++|++.+.||+|+||.||+|.+..+++.||||++...  ....+.+.+|+.+++.+.|+||     +++++++...+.
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~   87 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI-----VSYYTSFVVKDE   87 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTB-----CCEEEEEESSSC
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCE-----eeEEEEEeecCC
Confidence            357899999999999999999999989999999998643  2334567789988888877766     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhc------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          168 ICIVFEKL-GPSLYDFLRKN------SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~------~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                      .++||||+ +++|.+++...      ....+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||+
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~  167 (303)
T 2vwi_A           88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV  167 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred             cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence            99999999 99999999741      224699999999999999999999999999999999999998777555555554


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                      +........                   ...........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.
T Consensus       168 ~~~~~~~~~-------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  228 (303)
T 2vwi_A          168 SAFLATGGD-------------------ITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH  228 (303)
T ss_dssp             HHHCC----------------------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             hheeccCCC-------------------ccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence            332211100                   000011123478999999999976 568999999999999999999999998


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      .............  ...+.                     ...                 ..........++.++.+||
T Consensus       229 ~~~~~~~~~~~~~--~~~~~---------------------~~~-----------------~~~~~~~~~~~~~~~~~li  268 (303)
T 2vwi_A          229 KYPPMKVLMLTLQ--NDPPS---------------------LET-----------------GVQDKEMLKKYGKSFRKMI  268 (303)
T ss_dssp             TSCGGGHHHHHHT--SSCCC---------------------TTC----------------------CCCCCCCHHHHHHH
T ss_pred             cCchhhHHHHHhc--cCCCc---------------------ccc-----------------ccccchhhhhhhHHHHHHH
Confidence            7665443322211  10000                     000                 0000112345677899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          400 QGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      .+||+.||++|||+.|+++||||++...
T Consensus       269 ~~~l~~dp~~Rps~~~ll~h~~~~~~~~  296 (303)
T 2vwi_A          269 SLCLQKDPEKRPTAAELLRHKFFQKAKN  296 (303)
T ss_dssp             HHHCCSSGGGSCCHHHHHTSTTC-----
T ss_pred             HHHccCChhhCcCHHHHhhChhhhcCCC
Confidence            9999999999999999999999987543

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=7.8e-47  Score=353.45  Aligned_cols=246  Identities=20%  Similarity=0.322  Sum_probs=203.4

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      .++|++++.||+|+||.||+|.+. ++..||+|++.......+.+.+|+.++..++|+||     +++++++.+.+..++
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~l   96 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKL-----VQLYGVCTKQRPIFI   96 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTB-----CCEEEEECSSSSEEE
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCE-----eeEEEEEecCCCeEE
Confidence            478999999999999999999875 67789999998766666788999999999988777     999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++                  
T Consensus        97 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~------------------  157 (283)
T 3gen_A           97 ITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG------------------  157 (283)
T ss_dssp             EECCCTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTS------------------
T ss_pred             EEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCC------------------
Confidence            99999 999999997633 3699999999999999999999999999999999999997655                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL  324 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~  324 (438)
                               .++|+|||++......    .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||...+..
T Consensus       158 ---------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~  228 (283)
T 3gen_A          158 ---------VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS  228 (283)
T ss_dssp             ---------CEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred             ---------CEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh
Confidence                     5677777776644322    122356778999999999999999999999999999998 99999887776


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +....+.......                                                 .....++.+.+||.+||+
T Consensus       229 ~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~l~~li~~~l~  259 (283)
T 3gen_A          229 ETAEHIAQGLRLY-------------------------------------------------RPHLASEKVYTIMYSCWH  259 (283)
T ss_dssp             HHHHHHHTTCCCC-------------------------------------------------CCTTCCHHHHHHHHHTTC
T ss_pred             HHHHHHhcccCCC-------------------------------------------------CCCcCCHHHHHHHHHHcc
Confidence            6655544321110                                                 112346689999999999


Q ss_pred             cCCCCCCCHHHHhcC
Q 013678          405 YDPAERLKAREALRH  419 (438)
Q Consensus       405 ~dP~~Rpta~ell~h  419 (438)
                      .||++|||+.|+++|
T Consensus       260 ~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          260 EKADERPTFKILLSN  274 (283)
T ss_dssp             SSGGGSCCHHHHHHH
T ss_pred             CChhHCcCHHHHHHH
Confidence            999999999999975

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=6.5e-47  Score=358.82  Aligned_cols=265  Identities=16%  Similarity=0.221  Sum_probs=199.8

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec-chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS-INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++.. .....+.+.+|+.+++.++|+||     +++++++.+++..+
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~~~~   83 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV-----LKFIGVLYKDKRLN   83 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEETTEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCc-----ccEEEEEecCCeeE
Confidence            3789999999999999999999999999999998864 34556778899999999988777     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        84 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  162 (310)
T 3s95_A           84 FITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK  162 (310)
T ss_dssp             EEEECCTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred             EEEEecCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence            999999 999999998743 469999999999999999999999999999999999999877755555554433221111


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA  328 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~  328 (438)
                      ....          .................||+.|+|||++.+..++.++|||||||++|+|++|..||........  
T Consensus       163 ~~~~----------~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~--  230 (310)
T 3s95_A          163 TQPE----------GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTM--  230 (310)
T ss_dssp             ---------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCT--
T ss_pred             cccc----------ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHH--
Confidence            0000          0000000000011135799999999999999999999999999999999999999865321100  


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                                                           ........        .........+++.+.+||.+||+.||+
T Consensus       231 -------------------------------------~~~~~~~~--------~~~~~~~~~~~~~l~~li~~~l~~dP~  265 (310)
T 3s95_A          231 -------------------------------------DFGLNVRG--------FLDRYCPPNCPPSFFPITVRCCDLDPE  265 (310)
T ss_dssp             -------------------------------------TSSBCHHH--------HHHHTCCTTCCTTHHHHHHHHTCSSGG
T ss_pred             -------------------------------------HHhhhhhc--------cccccCCCCCCHHHHHHHHHHccCChh
Confidence                                                 00000000        001112345677899999999999999


Q ss_pred             CCCCHHHHhc
Q 013678          409 ERLKAREALR  418 (438)
Q Consensus       409 ~Rpta~ell~  418 (438)
                      +|||+.++++
T Consensus       266 ~Rps~~~l~~  275 (310)
T 3s95_A          266 KRPSFVKLEH  275 (310)
T ss_dssp             GSCCHHHHHH
T ss_pred             hCcCHHHHHH
Confidence            9999999986

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=5.8e-47  Score=361.23  Aligned_cols=261  Identities=16%  Similarity=0.223  Sum_probs=189.9

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCc---EEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      ...++|++.+.||+|+||.||+|++..++.   .||||+++..   ....+.+.+|+.+++.++|+||     +++++++
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~   94 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHV-----AKLVGVS   94 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTB-----CCCCEEE
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCce-----ehhhcee
Confidence            345789999999999999999999887765   7999998753   3445778899999999988777     9999998


Q ss_pred             ccCCeE------EEEEccC-CCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 013678          163 DYRNHI------CIVFEKL-GPSLYDFLRKNS----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       163 ~~~~~~------~lv~e~~-~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  231 (438)
                      ......      ++||||+ +++|.+++....    ...+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus        95 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~  174 (323)
T 3qup_A           95 LRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDM  174 (323)
T ss_dssp             ECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS
T ss_pred             eccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCC
Confidence            876554      9999999 999999996532    12589999999999999999999999999999999999997655


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHH
Q 013678          232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGC  306 (438)
Q Consensus       232 ~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  306 (438)
                                                 .+||+|||++.......     ....+|+.|+|||++.+..++.++|||||||
T Consensus       175 ---------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  227 (323)
T 3qup_A          175 ---------------------------TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGV  227 (323)
T ss_dssp             ---------------------------CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             ---------------------------CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHH
Confidence                                       56777777765433221     1235678899999999999999999999999


Q ss_pred             HHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhh
Q 013678          307 ILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  385 (438)
Q Consensus       307 il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (438)
                      ++|+|++ |..||.+.+..+....+.....                                                 .
T Consensus       228 il~ell~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------------------------~  258 (323)
T 3qup_A          228 TMWEIMTRGQTPYAGIENAEIYNYLIGGNR-------------------------------------------------L  258 (323)
T ss_dssp             HHHHHHTTSCCTTTTCCGGGHHHHHHTTCC-------------------------------------------------C
T ss_pred             HHHHHHhCCCCCccccChHHHHHHHhcCCC-------------------------------------------------C
Confidence            9999999 9999988776555443322100                                                 0


Q ss_pred             hccCCchhHHHHHHHHccccCCCCCCC-------HHHHhcCCCCCCCCCCce
Q 013678          386 QHVDHSAGDLIDLLQGLLRYDPAERLK-------AREALRHPFFTRDVRRPT  430 (438)
Q Consensus       386 ~~~~~~~~~l~~ll~~~L~~dP~~Rpt-------a~ell~hp~f~~~~~~~~  430 (438)
                      .....+++++.+||.+||+.||++|||       ++++++|+|+......|.
T Consensus       259 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~pl  310 (323)
T 3qup_A          259 KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPL  310 (323)
T ss_dssp             CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----------
T ss_pred             CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCCCCC
Confidence            112345678999999999999999999       888999999998766654

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=1.9e-46  Score=356.11  Aligned_cols=263  Identities=29%  Similarity=0.430  Sum_probs=203.7

Q ss_pred             eecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecc
Q 013678           84 FAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (438)
Q Consensus        84 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~  160 (438)
                      +.......++|++.+.||+|+||.||+|.+. +++.||||++...   ....+.+.+|+.++..+.|+   ++|++++++
T Consensus        20 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~---~~~iv~~~~   95 (313)
T 3cek_A           20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH---SDKIIRLYD   95 (313)
T ss_dssp             CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGG---CTTBCCEEE
T ss_pred             eeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhcccc---CCceEEEEE
Confidence            3334455678999999999999999999985 5888999999643   33456788999999999862   145599999


Q ss_pred             eeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          161 WFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                      ++.+.+.+++|||+.+++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++. +         
T Consensus        96 ~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~---------  163 (313)
T 3cek_A           96 YEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-G---------  163 (313)
T ss_dssp             EEECSSEEEEEECCCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-T---------
T ss_pred             EeecCCEEEEEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-C---------
Confidence            999999999999976999999998764  7999999999999999999999999999999999999953 3         


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhC-----------CCCCcchhHHHH
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILG-----------LGWNYPCDLWSV  304 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSl  304 (438)
                                        .+||+|||++.......     ....||+.|+|||++.+           ..++.++|||||
T Consensus       164 ------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~sl  225 (313)
T 3cek_A          164 ------------------MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL  225 (313)
T ss_dssp             ------------------EEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHH
T ss_pred             ------------------eEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHH
Confidence                              46777777776543322     23478999999999976           468899999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhh
Q 013678          305 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  384 (438)
Q Consensus       305 G~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (438)
                      ||++|+|++|..||........  .+......                   ...                          
T Consensus       226 G~il~el~~g~~pf~~~~~~~~--~~~~~~~~-------------------~~~--------------------------  258 (313)
T 3cek_A          226 GCILYYMTYGKTPFQQIINQIS--KLHAIIDP-------------------NHE--------------------------  258 (313)
T ss_dssp             HHHHHHHHHSSCTTTTCCSHHH--HHHHHHCT-------------------TSC--------------------------
T ss_pred             HHHHHHHHhCCCchhhHHHHHH--HHHHHHhc-------------------ccc--------------------------
Confidence            9999999999999976543221  11111100                   000                          


Q ss_pred             hhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       385 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      .......+.++.+||.+||+.||++|||+.|+|+||||+....
T Consensus       259 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~  301 (313)
T 3cek_A          259 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH  301 (313)
T ss_dssp             CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC--
T ss_pred             cCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCCC
Confidence            0112234568999999999999999999999999999987643

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.6e-47  Score=360.87  Aligned_cols=251  Identities=24%  Similarity=0.442  Sum_probs=194.7

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh-------hHHHHHHHHHHHHHH----HhcCCCCcce
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRL----ARHDIGGTRC  155 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~E~~~l~~l----~~~~i~~~~i  155 (438)
                      ++.+.++|++.+.||+|+||.||+|++..+++.||||++.....       ....+.+|+.++..+    .|+||     
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i-----  100 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGV-----  100 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSB-----
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCe-----
Confidence            45677899999999999999999999999999999999965332       223455799999999    56655     


Q ss_pred             EEecceeccCCeEEEEEcc-C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe-cCcc
Q 013678          156 VQIRNWFDYRNHICIVFEK-L-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV-SAEY  232 (438)
Q Consensus       156 v~~~~~~~~~~~~~lv~e~-~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~-~~~~  232 (438)
                      +++++++...+..++|||+ + +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+||+++ .++ 
T Consensus       101 ~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~-  177 (312)
T 2iwi_A          101 IRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG-  177 (312)
T ss_dssp             CCEEEEC-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTT-
T ss_pred             eeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCC-
Confidence            9999999999999999999 5 899999998764  699999999999999999999999999999999999997 444 


Q ss_pred             cccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhCCCCC-cchhHHHHHHHHHH
Q 013678          233 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVE  310 (438)
Q Consensus       233 ~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~e  310 (438)
                                                .+||+|||++...... .....||..|+|||++.+..+. .++|||||||++|+
T Consensus       178 --------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~  231 (312)
T 2iwi_A          178 --------------------------CAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYD  231 (312)
T ss_dssp             --------------------------EEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred             --------------------------eEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHH
Confidence                                      4677777777654332 2335789999999999877664 58999999999999


Q ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC
Q 013678          311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  390 (438)
Q Consensus       311 lltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (438)
                      |++|..||.....      +....                                                  ......
T Consensus       232 l~~g~~pf~~~~~------~~~~~--------------------------------------------------~~~~~~  255 (312)
T 2iwi_A          232 MVCGDIPFERDQE------ILEAE--------------------------------------------------LHFPAH  255 (312)
T ss_dssp             HHHSSCSCCSHHH------HHHTC--------------------------------------------------CCCCTT
T ss_pred             HHHCCCCCCChHH------Hhhhc--------------------------------------------------cCCccc
Confidence            9999999964211      11000                                                  011234


Q ss_pred             chhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       391 ~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      ++..+.+||.+||+.||++|||+.|+++||||++...
T Consensus       256 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~  292 (312)
T 2iwi_A          256 VSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE  292 (312)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence            5678999999999999999999999999999998654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=8.4e-47  Score=354.09  Aligned_cols=250  Identities=19%  Similarity=0.314  Sum_probs=211.2

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      +...++|++.+.||+|+||.||+|.+..+++.||+|++.......+.+.+|+.+++.++|+|+     +++++++.+.+.
T Consensus         9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~   83 (288)
T 3kfa_A            9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL-----VQLLGVCTREPP   83 (288)
T ss_dssp             BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTB-----CCEEEEECSSSS
T ss_pred             cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEccCCC
Confidence            445688999999999999999999999999999999998777777889999999999988877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      .|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+||+++.++               
T Consensus        84 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~---------------  148 (288)
T 3kfa_A           84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH---------------  148 (288)
T ss_dssp             EEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGG---------------
T ss_pred             EEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCC---------------
Confidence            99999999 89999999886656799999999999999999999999999999999999997666               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTH  321 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~  321 (438)
                                  .++|+|||++.......    ....+|..|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus       149 ------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~  216 (288)
T 3kfa_A          149 ------------LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI  216 (288)
T ss_dssp             ------------CEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ------------CEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                        46667777665543322    12356888999999999999999999999999999999 99999876


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +.......+....                                                 ....+..+++.+.+||.+
T Consensus       217 ~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~l~~li~~  247 (288)
T 3kfa_A          217 DLSQVYELLEKDY-------------------------------------------------RMERPEGCPEKVYELMRA  247 (288)
T ss_dssp             CGGGHHHHHHTTC-------------------------------------------------CCCCCTTCCHHHHHHHHH
T ss_pred             CHHHHHHHHhccC-------------------------------------------------CCCCCCCCCHHHHHHHHH
Confidence            6554443332210                                                 011123456789999999


Q ss_pred             ccccCCCCCCCHHHHhc
Q 013678          402 LLRYDPAERLKAREALR  418 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~  418 (438)
                      ||+.||.+|||+.|+++
T Consensus       248 ~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          248 CWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HhCCChhhCcCHHHHHH
Confidence            99999999999999976

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=2e-46  Score=352.69  Aligned_cols=254  Identities=23%  Similarity=0.353  Sum_probs=200.9

Q ss_pred             EEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEc
Q 013678           95 KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (438)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e  173 (438)
                      .....||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.+++.+.|+||     +++++++...+..++|||
T Consensus        25 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~lv~e   99 (295)
T 2clq_A           25 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI-----VQYLGSFSENGFIKIFME   99 (295)
T ss_dssp             SSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTB-----CCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCE-----eeEeeEEEeCCcEEEEEE
Confidence            33448999999999999999999999999987543 345678899999999988777     999999999999999999


Q ss_pred             cC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec-CcccccCCccccccCCCCCCc
Q 013678          174 KL-GPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       174 ~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~-~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |+ +++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||+++. ++                   
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~-------------------  160 (295)
T 2clq_A          100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSG-------------------  160 (295)
T ss_dssp             CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTC-------------------
T ss_pred             eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCC-------------------
Confidence            99 899999998753 235678999999999999999999999999999999999975 33                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLG--WNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                              .++|+|||++......   .....||..|+|||++.+..  ++.++|||||||++|+|++|..||.......
T Consensus       161 --------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  232 (295)
T 2clq_A          161 --------VLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ  232 (295)
T ss_dssp             --------CEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH
T ss_pred             --------CEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh
Confidence                    5777777777654322   23357899999999998754  8899999999999999999999997544332


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ............                                               ......++.++.+||.+||+.
T Consensus       233 ~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~li~~~l~~  265 (295)
T 2clq_A          233 AAMFKVGMFKVH-----------------------------------------------PEIPESMSAEAKAFILKCFEP  265 (295)
T ss_dssp             HHHHHHHHHCCC-----------------------------------------------CCCCTTSCHHHHHHHHHTTCS
T ss_pred             HHHHhhcccccc-----------------------------------------------ccccccCCHHHHHHHHHHccC
Confidence            211111110000                                               011234577899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      ||++|||+.|+|+||||+....
T Consensus       266 dp~~Rps~~~ll~~~~~~~~~~  287 (295)
T 2clq_A          266 DPDKRACANDLLVDEFLKVSSK  287 (295)
T ss_dssp             STTTSCCHHHHHTSGGGCC---
T ss_pred             ChhhCCCHHHHhcChhhhhccc
Confidence            9999999999999999987654

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.8e-46  Score=363.10  Aligned_cols=250  Identities=22%  Similarity=0.312  Sum_probs=199.4

Q ss_pred             cCCceEEEeeeeeecceEEEEEE-----ECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHH-HhcCCCCcceEEecce
Q 013678           90 LTPRCKILSKMGEGTFGQVVECF-----DNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNW  161 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~  161 (438)
                      ..++|++.+.||+|+||.||+|+     +..+++.||||+++...  ...+.+.+|+.++..+ .|+||     ++++++
T Consensus        20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpni-----v~~~~~   94 (359)
T 3vhe_A           20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV-----VNLLGA   94 (359)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCEEEE
T ss_pred             cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcce-----eeeeee
Confidence            45789999999999999999998     56677999999997532  3446788999999999 55666     999999


Q ss_pred             eccCC-eEEEEEccC-CCCHHHHHHhcCC---------------------------------------------------
Q 013678          162 FDYRN-HICIVFEKL-GPSLYDFLRKNSY---------------------------------------------------  188 (438)
Q Consensus       162 ~~~~~-~~~lv~e~~-~~~L~~~l~~~~~---------------------------------------------------  188 (438)
                      +.+.+ .+++||||| +++|.+++.....                                                   
T Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (359)
T 3vhe_A           95 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLS  174 (359)
T ss_dssp             ECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------
T ss_pred             eecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccc
Confidence            87754 599999999 8999999986532                                                   


Q ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCC
Q 013678          189 -------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP  255 (438)
Q Consensus       189 -------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~  255 (438)
                                   ..+++..++.++.||+.||+|||++||+||||||+|||++.++.                       
T Consensus       175 ~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~-----------------------  231 (359)
T 3vhe_A          175 DVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV-----------------------  231 (359)
T ss_dssp             ---------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC-----------------------
T ss_pred             hhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCc-----------------------
Confidence                         12899999999999999999999999999999999999987664                       


Q ss_pred             CCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 013678          256 KSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM  329 (438)
Q Consensus       256 ~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~  329 (438)
                          +||+|||++......     .....||+.|+|||++.+..++.++|||||||++|+|++ |..||.+......+..
T Consensus       232 ----~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~  307 (359)
T 3vhe_A          232 ----VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR  307 (359)
T ss_dssp             ----EEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH
T ss_pred             ----EEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHH
Confidence                555555555433221     123467889999999999999999999999999999998 9999987654433322


Q ss_pred             HHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCC
Q 013678          330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAE  409 (438)
Q Consensus       330 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~  409 (438)
                      .......                                                ...+..+++++.+||.+||+.||++
T Consensus       308 ~~~~~~~------------------------------------------------~~~~~~~~~~l~~li~~~l~~dP~~  339 (359)
T 3vhe_A          308 RLKEGTR------------------------------------------------MRAPDYTTPEMYQTMLDCWHGEPSQ  339 (359)
T ss_dssp             HHHHTCC------------------------------------------------CCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             HHHcCCC------------------------------------------------CCCCCCCCHHHHHHHHHHccCChhh
Confidence            2221100                                                0112345678999999999999999


Q ss_pred             CCCHHHHhcC
Q 013678          410 RLKAREALRH  419 (438)
Q Consensus       410 Rpta~ell~h  419 (438)
                      |||+.|+++|
T Consensus       340 Rps~~ell~~  349 (359)
T 3vhe_A          340 RPTFSELVEH  349 (359)
T ss_dssp             SCCHHHHHHH
T ss_pred             CCCHHHHHHH
Confidence            9999999976

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.4e-46  Score=361.86  Aligned_cols=250  Identities=18%  Similarity=0.291  Sum_probs=205.3

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCC-------CcEEEEEEeecc--hhhHHHHHHHHHHHHHH-HhcCCCCcceEEe
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEK-------KELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQI  158 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~  158 (438)
                      ...++|++.++||+|+||.||+|++..+       +..||||+++..  ......+.+|+.+++.+ +|+||     +++
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnI-----v~~  140 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNI-----INL  140 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCE
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchh-----hhh
Confidence            3457999999999999999999997543       357999999753  23446788999999999 78777     999


Q ss_pred             cceeccCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 013678          159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPE  223 (438)
Q Consensus       159 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~  223 (438)
                      ++++...+.+|+||||+ +++|.+++....              ...+++..++.++.||+.||+|||++||+||||||+
T Consensus       141 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~  220 (382)
T 3tt0_A          141 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR  220 (382)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             eeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcc
Confidence            99999999999999999 899999998754              135999999999999999999999999999999999


Q ss_pred             cEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcc
Q 013678          224 NILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYP  298 (438)
Q Consensus       224 NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~  298 (438)
                      |||++.++                           .+||+|||++......     .....+|..|+|||++.+..++.+
T Consensus       221 NIll~~~~---------------------------~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  273 (382)
T 3tt0_A          221 NVLVTEDN---------------------------VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ  273 (382)
T ss_dssp             GEEECTTC---------------------------CEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHH
T ss_pred             eEEEcCCC---------------------------cEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCch
Confidence            99997655                           4667777766544322     222466889999999999999999


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHh
Q 013678          299 CDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL  377 (438)
Q Consensus       299 ~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (438)
                      +|||||||++|+|++ |..||.+.+..+....+.....                                          
T Consensus       274 ~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~------------------------------------------  311 (382)
T 3tt0_A          274 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR------------------------------------------  311 (382)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC------------------------------------------
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC------------------------------------------
Confidence            999999999999999 9999988776655444432110                                          


Q ss_pred             ccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       378 ~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                             ......+++++.+||.+||+.||++|||+.|++++
T Consensus       312 -------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          312 -------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             -------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                   01123457789999999999999999999999875

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.4e-45  Score=347.07  Aligned_cols=255  Identities=22%  Similarity=0.266  Sum_probs=200.2

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .+.++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+.+++.+.|+++    +..+..++...+..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~----i~~~~~~~~~~~~~   80 (296)
T 3uzp_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVG----IPTIRWCGAEGDYN   80 (296)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTSTT----CCCEEEEEEETTEE
T ss_pred             eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcCCC----CCccccccCCCCce
Confidence            46789999999999999999999999999999999986533 23458899999999999875    23344445677889


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      ++||||++++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++                 
T Consensus        81 ~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~-----------------  142 (296)
T 3uzp_A           81 VMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK-----------------  142 (296)
T ss_dssp             EEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGG-----------------
T ss_pred             EEEEEecCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCC-----------------
Confidence            9999999999999998543 4699999999999999999999999999999999999995211                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC----------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                             .+..+||+|||++......          .....||+.|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus       143 -------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  215 (296)
T 3uzp_A          143 -------KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW  215 (296)
T ss_dssp             -------GTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             -------CCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence                   2335677777776654332          23457999999999999999999999999999999999999999


Q ss_pred             CCCChH---HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          319 QTHENL---EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       319 ~~~~~~---~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      .+.+..   ..+..+.......|                                             .......+++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~l  250 (296)
T 3uzp_A          216 QGLKAATKRQKYERISEKKMSTP---------------------------------------------IEVLCKGYPSEF  250 (296)
T ss_dssp             SSCCCSSSSSHHHHHHHHHHHSC---------------------------------------------HHHHTTTSCHHH
T ss_pred             CCcCchhhhhhhhhhcccccCCc---------------------------------------------hHHHHhhCCHHH
Confidence            764321   12222211100000                                             111224567789


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q 013678          396 IDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      .+||.+||+.||++|||+.++++
T Consensus       251 ~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          251 ATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhcCcCcCCCHHHHHH
Confidence            99999999999999999999875

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=4.8e-46  Score=350.15  Aligned_cols=255  Identities=22%  Similarity=0.251  Sum_probs=195.1

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .+.++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+|+.+++.+.|+++    +..+..++...+..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~----i~~~~~~~~~~~~~   80 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVG----IPTIRWCGAEGDYN   80 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTT----CCCEEEEEEETTEE
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCC----CCeeeeecCCCCce
Confidence            45689999999999999999999999999999999876432 23457889999999998865    23444455677899


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      ++||||++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.+                  
T Consensus        81 ~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~------------------  141 (296)
T 4hgt_A           81 VMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG------------------  141 (296)
T ss_dssp             EEEEECCCCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCG------------------
T ss_pred             EEEEEccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeecc------------------
Confidence            9999999999999998543 469999999999999999999999999999999999999311                  


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC----------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                            +....+||+|||++......          .....||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       142 ------~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  215 (296)
T 4hgt_A          142 ------KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW  215 (296)
T ss_dssp             ------GGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ------CCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCC
Confidence                  12235677777776544322          12357899999999999999999999999999999999999999


Q ss_pred             CCCChHH---HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          319 QTHENLE---HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       319 ~~~~~~~---~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      .+.+...   ....+......                                             .........+++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~l  250 (296)
T 4hgt_A          216 QGLKAATKRQKYERISEKKMS---------------------------------------------TPIEVLCKGYPSEF  250 (296)
T ss_dssp             SSCCCSSSSSHHHHHHHHHHH---------------------------------------------SCHHHHTTTSCHHH
T ss_pred             cccchhhhhhhhhhhhccccc---------------------------------------------chhhhhhccCCHHH
Confidence            7643321   11111111000                                             00111223457799


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q 013678          396 IDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      .+||.+||+.||++|||+.++++
T Consensus       251 ~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          251 ATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCCHHHHHH
Confidence            99999999999999999999876

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=5.8e-46  Score=348.25  Aligned_cols=252  Identities=20%  Similarity=0.235  Sum_probs=204.7

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhh--------HHHHHHHHHHHHHHHhcCCCCcceEEecc
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY--------REAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~E~~~l~~l~~~~i~~~~iv~~~~  160 (438)
                      ...++|++.+.||+|+||.||+|++..+++.||+|++......        .+.+.+|+.+++.++|+||     +++++
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~   90 (287)
T 4f0f_A           16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI-----VKLYG   90 (287)
T ss_dssp             CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTB-----CCEEE
T ss_pred             hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCc-----hhhhe
Confidence            4457899999999999999999999999999999998642211        1678899999999988777     99999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEecCcccccCC
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      ++.+..  ++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++|  |+||||||+|||++.++.     
T Consensus        91 ~~~~~~--~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~-----  162 (287)
T 4f0f_A           91 LMHNPP--RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE-----  162 (287)
T ss_dssp             EETTTT--EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCT-----
T ss_pred             eecCCC--eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCC-----
Confidence            998765  6999999 899999987654 47999999999999999999999999  999999999999976541     


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHh--CCCCCcchhHHHHHHHHHHHHhCC
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL--GLGWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlG~il~elltg~  315 (438)
                                       +....+||+|||++...........||+.|+|||++.  ...++.++|||||||++|+|++|.
T Consensus       163 -----------------~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~  225 (287)
T 4f0f_A          163 -----------------NAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE  225 (287)
T ss_dssp             -----------------TCSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSS
T ss_pred             -----------------CCceeEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCC
Confidence                             1233589999999987666666678999999999984  445789999999999999999999


Q ss_pred             CCCCCCChHHH--HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchh
Q 013678          316 ALFQTHENLEH--LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  393 (438)
Q Consensus       316 ~pf~~~~~~~~--~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (438)
                      .||...+....  ...+.. .+.                                               .......+++
T Consensus       226 ~pf~~~~~~~~~~~~~~~~-~~~-----------------------------------------------~~~~~~~~~~  257 (287)
T 4f0f_A          226 GPFDEYSYGKIKFINMIRE-EGL-----------------------------------------------RPTIPEDCPP  257 (287)
T ss_dssp             CTTTTCCCCHHHHHHHHHH-SCC-----------------------------------------------CCCCCTTSCH
T ss_pred             CCCccccccHHHHHHHHhc-cCC-----------------------------------------------CCCCCcccCH
Confidence            99976543322  111111 000                                               0112235577


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ++.+||.+||+.||++|||+.|+++
T Consensus       258 ~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          258 RLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHH
Confidence            8999999999999999999999986

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1e-45  Score=342.77  Aligned_cols=245  Identities=24%  Similarity=0.359  Sum_probs=204.5

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      ++|++.+.||+|+||.||+|.+. +++.||+|++.......+.+.+|+.+++.++|+|+     +++++++.+.+..++|
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv   81 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL-----VQLYGVCLEQAPICLV   81 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTB-----CCEEEEECSSSSCEEE
T ss_pred             hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCE-----eeEEEEEccCCCeEEE
Confidence            68999999999999999999986 67789999998766666788999999999988776     9999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++                   
T Consensus        82 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~-------------------  141 (267)
T 3t9t_A           82 TEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ-------------------  141 (267)
T ss_dssp             ECCCTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGG-------------------
T ss_pred             EeCCCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCC-------------------
Confidence            9999 899999998754 4689999999999999999999999999999999999997666                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  325 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~  325 (438)
                              .++|+|||++......    .....+|..|+|||++.+..++.++|||||||++|+|++ |..||...+..+
T Consensus       142 --------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  213 (267)
T 3t9t_A          142 --------VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE  213 (267)
T ss_dssp             --------CEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             --------CEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH
Confidence                    4666677666543221    122356788999999999899999999999999999999 899998877665


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+......                                                 ......+..+.+||.+||+.
T Consensus       214 ~~~~i~~~~~~-------------------------------------------------~~~~~~~~~l~~li~~~l~~  244 (267)
T 3t9t_A          214 VVEDISTGFRL-------------------------------------------------YKPRLASTHVYQIMNHCWRE  244 (267)
T ss_dssp             HHHHHHTTCCC-------------------------------------------------CCCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHhcCCcC-------------------------------------------------CCCccCcHHHHHHHHHHccC
Confidence            55444321100                                                 01123467899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q 013678          406 DPAERLKAREALRH  419 (438)
Q Consensus       406 dP~~Rpta~ell~h  419 (438)
                      ||++|||+.+++++
T Consensus       245 ~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          245 RPEDRPAFSRLLRQ  258 (267)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=1.6e-46  Score=365.88  Aligned_cols=246  Identities=21%  Similarity=0.338  Sum_probs=200.9

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++..  ....+.+.+|+.+++.++|+||     +++++++...+.+
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~~~~  187 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI-----VRLIGVCTQKQPI  187 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTB-----CCEEEEECSSSSC
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCE-----EEEEEEEecCCCc
Confidence            47899999999999999999999999999999998753  2334567889999999988777     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      ||||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+              
T Consensus       188 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~--------------  252 (377)
T 3cbl_A          188 YIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVL--------------  252 (377)
T ss_dssp             EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCE--------------
T ss_pred             EEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcE--------------
Confidence            9999999 999999998653 359999999999999999999999999999999999999776654              


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTH  321 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~  321 (438)
                                   ||+|||++.......     ....++..|+|||++.+..++.++|||||||++|||++ |..||.+.
T Consensus       253 -------------kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~  319 (377)
T 3cbl_A          253 -------------KISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL  319 (377)
T ss_dssp             -------------EECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred             -------------EECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                         555555544322111     11235678999999998889999999999999999998 99999887


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +..+....+....                       +.                          ..+..+++++.+||.+
T Consensus       320 ~~~~~~~~~~~~~-----------------------~~--------------------------~~~~~~~~~l~~li~~  350 (377)
T 3cbl_A          320 SNQQTREFVEKGG-----------------------RL--------------------------PCPELCPDAVFRLMEQ  350 (377)
T ss_dssp             CHHHHHHHHHTTC-----------------------CC--------------------------CCCTTCCHHHHHHHHH
T ss_pred             CHHHHHHHHHcCC-----------------------CC--------------------------CCCCCCCHHHHHHHHH
Confidence            7655444332210                       00                          1122456789999999


Q ss_pred             ccccCCCCCCCHHHHhc
Q 013678          402 LLRYDPAERLKAREALR  418 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~  418 (438)
                      ||+.||++|||+.++++
T Consensus       351 cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          351 CWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HcCCCchhCcCHHHHHH
Confidence            99999999999999975

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=5.8e-46  Score=357.20  Aligned_cols=250  Identities=21%  Similarity=0.308  Sum_probs=204.4

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEEC-----CCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecc
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~  160 (438)
                      +...++|++.+.||+|+||.||+|++.     .+++.||||+++..  ....+.+.+|+.+++.++|+||     +++++
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~  117 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI-----VKLLG  117 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTB-----CCEEE
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCE-----EEEEE
Confidence            344578999999999999999999987     45589999999753  2345678899999999988777     99999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcee
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNS----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIH  217 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  217 (438)
                      ++.+.+..|+||||+ +++|.+++....                      ...+++..++.++.||+.||.|||++||+|
T Consensus       118 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH  197 (343)
T 1luf_A          118 VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVH  197 (343)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            999999999999999 899999998742                      146899999999999999999999999999


Q ss_pred             cCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC-----CCcccccCCCcchhHHHhC
Q 013678          218 TDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILG  292 (438)
Q Consensus       218 rDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~  292 (438)
                      |||||+|||++.++                           .+||+|||++.....     ......||+.|+|||++.+
T Consensus       198 ~Dlkp~NIl~~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  250 (343)
T 1luf_A          198 RDLATRNCLVGENM---------------------------VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY  250 (343)
T ss_dssp             SCCSGGGEEECGGG---------------------------CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH
T ss_pred             CCCCcceEEECCCC---------------------------eEEEeecCCCcccccCccccccCCCcccceecChhhhcc
Confidence            99999999997766                           466666666654321     1223467889999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhH
Q 013678          293 LGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM  371 (438)
Q Consensus       293 ~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (438)
                      ..++.++|||||||++|+|++ |..||.+.+..+....+....  .                                  
T Consensus       251 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~--~----------------------------------  294 (343)
T 1luf_A          251 NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGN--I----------------------------------  294 (343)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC--C----------------------------------
T ss_pred             CCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCC--c----------------------------------
Confidence            999999999999999999999 999998877665554433210  0                                  


Q ss_pred             HHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          372 RAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                                   ...+..++.++.+||.+||+.||++|||+.++++
T Consensus       295 -------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~  328 (343)
T 1luf_A          295 -------------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  328 (343)
T ss_dssp             -------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                         0112345678999999999999999999999986

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=3e-46  Score=376.28  Aligned_cols=248  Identities=19%  Similarity=0.321  Sum_probs=208.0

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      -..+|++.++||+|+||.||+|.+..++..||||+++......+.+.+|+.+++.++|+||     +++++++...+.+|
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~l~~~~~~~~~~~  292 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL-----VQLLGVCTREPPFY  292 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTB-----CCEEEEECSSSSCE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCE-----eeEEEEEecCCcEE
Confidence            3468999999999999999999999999999999998766667889999999999988877     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      |||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++                 
T Consensus       293 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~-----------------  355 (495)
T 1opk_A          293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENH-----------------  355 (495)
T ss_dssp             EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG-----------------
T ss_pred             EEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCC-----------------
Confidence            999999 89999999876656799999999999999999999999999999999999997766                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCh
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN  323 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~  323 (438)
                                .+||+|||++.......    ....++..|+|||++.+..++.++|||||||++|||++ |..||.+.+.
T Consensus       356 ----------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~  425 (495)
T 1opk_A          356 ----------LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL  425 (495)
T ss_dssp             ----------CEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred             ----------cEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH
Confidence                      45666666665433221    12345778999999999899999999999999999999 9999988765


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .+....+....                       +                          ...+..+++++.+||.+||
T Consensus       426 ~~~~~~~~~~~-----------------------~--------------------------~~~~~~~~~~l~~li~~cl  456 (495)
T 1opk_A          426 SQVYELLEKDY-----------------------R--------------------------MERPEGCPEKVYELMRACW  456 (495)
T ss_dssp             GGHHHHHHTTC-----------------------C--------------------------CCCCTTCCHHHHHHHHHHT
T ss_pred             HHHHHHHHcCC-----------------------C--------------------------CCCCCCCCHHHHHHHHHHc
Confidence            54443332110                       0                          1122345778999999999


Q ss_pred             ccCCCCCCCHHHHhc
Q 013678          404 RYDPAERLKAREALR  418 (438)
Q Consensus       404 ~~dP~~Rpta~ell~  418 (438)
                      +.||++|||+.+|++
T Consensus       457 ~~dP~~RPs~~el~~  471 (495)
T 1opk_A          457 QWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CcChhHCcCHHHHHH
Confidence            999999999999976

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=9.4e-46  Score=358.85  Aligned_cols=258  Identities=16%  Similarity=0.223  Sum_probs=195.4

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCC-----CcEEEEEEeecchhhHHHHHHHHHHHHHHHh----------cCCCC
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSINKYREAAMIEIDVLQRLAR----------HDIGG  152 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~----------~~i~~  152 (438)
                      +...++|++.++||+|+||.||+|.+..+     ++.||||++....   ....+|+.++..+.+          ..+.|
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h  107 (364)
T 3op5_A           31 DMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN---GPLFTELKFYQRAAKPEQIQKWIRTRKLKY  107 (364)
T ss_dssp             CTTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC---HHHHHHHHHHHHHCCHHHHHHHHHHTTCSC
T ss_pred             ccCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccc---hhHHHHHHHHHhhhhhHHHHHHHHHhhccC
Confidence            34456999999999999999999998765     5789999987543   234556666665544          34566


Q ss_pred             cceEEecceeccC----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe
Q 013678          153 TRCVQIRNWFDYR----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  228 (438)
Q Consensus       153 ~~iv~~~~~~~~~----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~  228 (438)
                      +|++++++++...    .+.||||||++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus       108 ~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~  186 (364)
T 3op5_A          108 LGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLN  186 (364)
T ss_dssp             CCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEE
T ss_pred             CCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEe
Confidence            7779999998764    5689999999999999998753 4799999999999999999999999999999999999997


Q ss_pred             --cCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC----------CcccccCCCcchhHHHhCCCCC
Q 013678          229 --SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWN  296 (438)
Q Consensus       229 --~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~  296 (438)
                        .++                           .+||+|||++......          .....||+.|+|||++.+..++
T Consensus       187 ~~~~~---------------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  239 (364)
T 3op5_A          187 YKNPD---------------------------QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPS  239 (364)
T ss_dssp             SSCTT---------------------------CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCC
T ss_pred             cCCCC---------------------------eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCC
Confidence              444                           5677777776543211          1234699999999999999999


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHH
Q 013678          297 YPCDLWSVGCILVELCSGEALFQTHENLEH-LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW  375 (438)
Q Consensus       297 ~~~DiwSlG~il~elltg~~pf~~~~~~~~-~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (438)
                      .++|||||||++|||++|..||.+...... ...........                                      
T Consensus       240 ~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~--------------------------------------  281 (364)
T 3op5_A          240 RRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYREN--------------------------------------  281 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHC--------------------------------------
T ss_pred             chhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhh--------------------------------------
Confidence            999999999999999999999985332222 21111110000                                      


Q ss_pred             Hhccchhhhhh--ccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          376 KLLRLPNLIMQ--HVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       376 ~~~~~~~~~~~--~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                          .......  ....++.++.+||..||..||.+|||+.++++
T Consensus       282 ----~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          282 ----IASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             ----HHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ----HHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence                0000000  01355779999999999999999999998774

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1e-45  Score=368.29  Aligned_cols=244  Identities=22%  Similarity=0.322  Sum_probs=200.7

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC-CeEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-NHIC  169 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~-~~~~  169 (438)
                      .++|++.+.||+|+||.||+|.+.  ++.||||+++... ..+.+.+|+.+++.++|+||     +++++++... +.+|
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~~  263 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNL-----VQLLGVIVEEKGGLY  263 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTB-----CCEEEEEECTTSCEE
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCE-----EEEEEEEEcCCCceE
Confidence            478999999999999999999874  7789999997643 55778999999999988877     9999987655 4899


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      |||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++                 
T Consensus       264 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~-----------------  326 (450)
T 1k9a_A          264 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN-----------------  326 (450)
T ss_dssp             EEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTS-----------------
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCC-----------------
Confidence            999999 89999999887645589999999999999999999999999999999999997655                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL  327 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~  327 (438)
                                .+||+|||++...........++..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+..
T Consensus       327 ----------~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~  396 (450)
T 1k9a_A          327 ----------VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV  396 (450)
T ss_dssp             ----------CEEECCCTTCEECC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHH
T ss_pred             ----------CEEEeeCCCcccccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence                      5677777777654443334467889999999999999999999999999999998 99999876655444


Q ss_pred             HHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCC
Q 013678          328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  407 (438)
Q Consensus       328 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  407 (438)
                      ..+....                       +                          ...+..+++++.+||.+||+.||
T Consensus       397 ~~i~~~~-----------------------~--------------------------~~~p~~~~~~l~~li~~cl~~dp  427 (450)
T 1k9a_A          397 PRVEKGY-----------------------K--------------------------MDAPDGCPPAVYDVMKNCWHLDA  427 (450)
T ss_dssp             HHHHTTC-----------------------C--------------------------CCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             HHHHcCC-----------------------C--------------------------CCCCCcCCHHHHHHHHHHcCCCh
Confidence            3332210                       0                          11223567799999999999999


Q ss_pred             CCCCCHHHHhc
Q 013678          408 AERLKAREALR  418 (438)
Q Consensus       408 ~~Rpta~ell~  418 (438)
                      ++|||+.++++
T Consensus       428 ~~Rpt~~~l~~  438 (450)
T 1k9a_A          428 ATRPTFLQLRE  438 (450)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hHCcCHHHHHH
Confidence            99999999874

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=9.9e-46  Score=366.69  Aligned_cols=272  Identities=24%  Similarity=0.301  Sum_probs=200.6

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccC
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+.+.+.|.+.+.||+|+||+||.+. ..+|+.||||++...  ..+.+.+|+.++..+ .|+||     +++++++.++
T Consensus        10 ~~~l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnI-----v~~~~~~~~~   81 (434)
T 2rio_A           10 EQSLKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNV-----IRYYCSETTD   81 (434)
T ss_dssp             SCSCSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTSTTB-----CCEEEEEECS
T ss_pred             hhhhhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCCCCc-----CeEEEEEecC
Confidence            34566778888999999999998754 567999999998653  345678899999887 67776     9999999999


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCC-----CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          166 NHICIVFEKLGPSLYDFLRKNSYRS-----FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~~~~~~-----l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                      +.+|||||||+++|.+++.......     .++..+..++.||+.||+|||++||+||||||+|||++.++.......  
T Consensus        82 ~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~--  159 (434)
T 2rio_A           82 RFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQ--  159 (434)
T ss_dssp             SEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCT--
T ss_pred             CeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccc--
Confidence            9999999999889999998654111     123345789999999999999999999999999999987653221110  


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-------cccccCCCcchhHHHhC-------CCCCcchhHHHHHH
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-------SYVVSTRHYRAPEVILG-------LGWNYPCDLWSVGC  306 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~  306 (438)
                                  ..+....+||+|||++.......       ....||+.|+|||++.+       ..++.++|||||||
T Consensus       160 ------------~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~  227 (434)
T 2rio_A          160 ------------TGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGC  227 (434)
T ss_dssp             ------------TCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHH
T ss_pred             ------------cCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHH
Confidence                        01245578999999987654432       23579999999999976       56899999999999


Q ss_pred             HHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhh
Q 013678          307 ILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  385 (438)
Q Consensus       307 il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (438)
                      ++|||++ |..||.......  ..+.......+                        .                   ...
T Consensus       228 il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~------------------------~-------------------~~~  262 (434)
T 2rio_A          228 VFYYILSKGKHPFGDKYSRE--SNIIRGIFSLD------------------------E-------------------MKC  262 (434)
T ss_dssp             HHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCC------------------------C-------------------CTT
T ss_pred             HHHHHHhCCCCCCCCchhhH--HHHhcCCCCcc------------------------c-------------------ccc
Confidence            9999999 999997654332  11111110000                        0                   000


Q ss_pred             hccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       386 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .....++.++.+||.+||+.||++|||+.|+++||||...
T Consensus       263 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~~  302 (434)
T 2rio_A          263 LHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK  302 (434)
T ss_dssp             CCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSCH
T ss_pred             cccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCCc
Confidence            0011235689999999999999999999999999999753

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=1.4e-45  Score=342.67  Aligned_cols=252  Identities=23%  Similarity=0.317  Sum_probs=196.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .++|++.+.||+|+||.||+|.+.  ++.||||+++...     ...+.+.+|+.+++.++|+||     +++++++.+.
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~   78 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI-----IALRGVCLKE   78 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTB-----CCEEEEECCC
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCE-----eeEEEEEecC
Confidence            478999999999999999999874  7889999986532     224678889999999988877     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCCCCcEEEecCcccccCCcccc
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR---LIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      +..++||||+ +++|.+++...   .+++..++.++.||+.||.|||++|   |+||||||+|||++..+..        
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~--------  147 (271)
T 3dtc_A           79 PNLCLVMEFARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN--------  147 (271)
T ss_dssp             --CEEEEECCTTEEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSS--------
T ss_pred             CceEEEEEcCCCCCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccc--------
Confidence            9999999999 99999998643   6999999999999999999999999   9999999999999753210        


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                 .......++|+|||++....... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus       148 -----------~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  216 (271)
T 3dtc_A          148 -----------GDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG  216 (271)
T ss_dssp             -----------SCCSSCCEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTT
T ss_pred             -----------ccccCcceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                       00124578999999987654332 345789999999999999999999999999999999999999988


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      .+.......+.....                                                .......+++.+.+||.
T Consensus       217 ~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~~li~  248 (271)
T 3dtc_A          217 IDGLAVAYGVAMNKL------------------------------------------------ALPIPSTCPEPFAKLME  248 (271)
T ss_dssp             SCHHHHHHHHHTSCC------------------------------------------------CCCCCTTCCHHHHHHHH
T ss_pred             CCHHHHHHhhhcCCC------------------------------------------------CCCCCcccCHHHHHHHH
Confidence            766554433321100                                                01112345678999999


Q ss_pred             HccccCCCCCCCHHHHhcC
Q 013678          401 GLLRYDPAERLKAREALRH  419 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~h  419 (438)
                      +||+.||++|||+.|+++|
T Consensus       249 ~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          249 DCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCcccCcCHHHHHHH
Confidence            9999999999999999874

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=7.4e-46  Score=356.95  Aligned_cols=259  Identities=17%  Similarity=0.228  Sum_probs=194.1

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECC---CCcEEEEEEeecchh------------hHHHHHHHHHHHHHHHhcCCC
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNE---KKELVAIKIVRSINK------------YREAAMIEIDVLQRLARHDIG  151 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~------------~~~~~~~E~~~l~~l~~~~i~  151 (438)
                      .+...++|++.+.||+|+||.||+|.+..   ++..||||++.....            ....+.+|+.++..+.|+|| 
T Consensus        32 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni-  110 (345)
T 2v62_A           32 DDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGI-  110 (345)
T ss_dssp             ECTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCC-
T ss_pred             ccccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCc-
Confidence            34456899999999999999999999987   788999999875321            11234456666666666666 


Q ss_pred             CcceEEecceecc----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEE
Q 013678          152 GTRCVQIRNWFDY----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL  227 (438)
Q Consensus       152 ~~~iv~~~~~~~~----~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli  227 (438)
                          +++++++..    ....|+||||++++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus       111 ----~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll  184 (345)
T 2v62_A          111 ----PLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLL  184 (345)
T ss_dssp             ----CCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             ----ceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEE
Confidence                999998877    78999999999999999998664  79999999999999999999999999999999999999


Q ss_pred             ecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC----------CcccccCCCcchhHHHhCCCCCc
Q 013678          228 VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNY  297 (438)
Q Consensus       228 ~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~  297 (438)
                      +.++                         ...+||+|||++......          .....||..|+|||++.+..++.
T Consensus       185 ~~~~-------------------------~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  239 (345)
T 2v62_A          185 GYKN-------------------------PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSR  239 (345)
T ss_dssp             ESSS-------------------------TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCH
T ss_pred             ccCC-------------------------CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCc
Confidence            7654                         125677777777543211          13357999999999999999999


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHH
Q 013678          298 PCDLWSVGCILVELCSGEALFQTH--ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW  375 (438)
Q Consensus       298 ~~DiwSlG~il~elltg~~pf~~~--~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (438)
                      ++|||||||++|+|++|..||.+.  +..............+|.....                                
T Consensus       240 ~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------  287 (345)
T 2v62_A          240 RSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLK--------------------------------  287 (345)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHH--------------------------------
T ss_pred             hhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHh--------------------------------
Confidence            999999999999999999999652  2222222222322223221100                                


Q ss_pred             HhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          376 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                               ......++.++.+||.+||+.||++|||++++++
T Consensus       288 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          288 ---------WAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             ---------HSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ---------hccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence                     0001256779999999999999999999999876

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=8.2e-46  Score=353.96  Aligned_cols=246  Identities=20%  Similarity=0.273  Sum_probs=193.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcE----EEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKEL----VAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      .++|++.+.||+|+||.||+|++..+++.    ||+|.++..  ....+.+.+|+.+++.++|+||     +++++++.+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~   88 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV-----CRLLGICLT   88 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTB-----CCEEEEEES
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCE-----eEEEEEEec
Confidence            47899999999999999999999888765    477776532  2345678899999999998877     999999987


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      +. .++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.           
T Consensus        89 ~~-~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~-----------  155 (327)
T 3poz_A           89 ST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-----------  155 (327)
T ss_dssp             SS-EEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTE-----------
T ss_pred             CC-eEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCC-----------
Confidence            55 77889999 999999998754 46999999999999999999999999999999999999987764           


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEAL  317 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~p  317 (438)
                                      +||+|||++.......     ....||..|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus       156 ----------------~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p  219 (327)
T 3poz_A          156 ----------------VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP  219 (327)
T ss_dssp             ----------------EEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ----------------EEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCC
Confidence                            5555665554332211     12356789999999999999999999999999999999 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+.+.......+.....                                                 ......++.++.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~  250 (327)
T 3poz_A          220 YDGIPASEISSILEKGER-------------------------------------------------LPQPPICTIDVYM  250 (327)
T ss_dssp             TTTCCGGGHHHHHHTTCC-------------------------------------------------CCCCTTBCHHHHH
T ss_pred             ccCCCHHHHHHHHHcCCC-------------------------------------------------CCCCccCCHHHHH
Confidence            987665544333322100                                                 0112345678999


Q ss_pred             HHHHccccCCCCCCCHHHHhcC
Q 013678          398 LLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      ||.+||+.||++|||+.|++++
T Consensus       251 li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          251 IMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHHcCCChhhCCCHHHHHHH
Confidence            9999999999999999999865

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=5.1e-46  Score=353.06  Aligned_cols=249  Identities=19%  Similarity=0.315  Sum_probs=202.6

Q ss_pred             cCCceEEEeeeeeecceEEEEEEEC-----CCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      ..++|++.+.||+|+||.||+|.+.     .+++.||||+++..  ....+.+.+|+.+++.++|+||     +++++++
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~   95 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV-----IKLYGAC   95 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEE
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCce-----eeEEEEE
Confidence            3578999999999999999999873     45688999999753  2345678899999999988777     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCC----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecC
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNSY----------------------RSFPIDLVRELGRQLLESVAFMHELRLIHTD  219 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~----------------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD  219 (438)
                      .+.+..++||||+ +++|.+++.....                      ..+++..++.++.||+.||+|||++||+|||
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d  175 (314)
T 2ivs_A           96 SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRD  175 (314)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccc
Confidence            9999999999999 8999999987542                      2489999999999999999999999999999


Q ss_pred             CCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCC
Q 013678          220 LKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLG  294 (438)
Q Consensus       220 lkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~  294 (438)
                      |||+|||++.++.                           +||+|||++.......     ....+|+.|+|||++.+..
T Consensus       176 ikp~NIli~~~~~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  228 (314)
T 2ivs_A          176 LAARNILVAEGRK---------------------------MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI  228 (314)
T ss_dssp             CSGGGEEEETTTE---------------------------EEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCE
T ss_pred             cchheEEEcCCCC---------------------------EEEccccccccccccccceeccCCCCcccccChhhhcCCC
Confidence            9999999987664                           5666666665433221     2235678899999999988


Q ss_pred             CCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHH
Q 013678          295 WNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA  373 (438)
Q Consensus       295 ~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (438)
                      ++.++|||||||++|+|++ |..||.+.........+....                                       
T Consensus       229 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~---------------------------------------  269 (314)
T 2ivs_A          229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH---------------------------------------  269 (314)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC---------------------------------------
T ss_pred             cCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCC---------------------------------------
Confidence            9999999999999999999 999998766544433332110                                       


Q ss_pred             HHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          374 VWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                                .......+++++.+||.+||+.||++|||+.|++++
T Consensus       270 ----------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          270 ----------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             ----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                      001123457789999999999999999999999874

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=2.3e-45  Score=348.35  Aligned_cols=249  Identities=25%  Similarity=0.358  Sum_probs=201.3

Q ss_pred             CCceEEEeeeeeecceEEEEEEE-----CCCCcEEEEEEeecch--hhHHHHHHHHHHHHHH-HhcCCCCcceEEeccee
Q 013678           91 TPRCKILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~  162 (438)
                      .++|++.+.||+|+||.||+|.+     ..+++.||||+++...  ...+.+.+|+.+++.+ +|+||     +++++++
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----~~~~~~~   96 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI-----VNLLGAC   96 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEE
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCe-----eeEEEEE
Confidence            47899999999999999999985     4577899999997543  3457788999999999 78777     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNSY----------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  225 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~----------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  225 (438)
                      .+.+..++||||+ +++|.+++.....                ..+++..++.++.||+.||.|||++||+||||||+||
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Ni  176 (313)
T 1t46_A           97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI  176 (313)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceE
Confidence            9999999999999 8899999987542                2489999999999999999999999999999999999


Q ss_pred             EEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchh
Q 013678          226 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCD  300 (438)
Q Consensus       226 li~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D  300 (438)
                      |++.++.+                           ||+|||++.......     ....||+.|+|||++.+..++.++|
T Consensus       177 l~~~~~~~---------------------------kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  229 (313)
T 1t46_A          177 LLTHGRIT---------------------------KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD  229 (313)
T ss_dssp             EEETTTEE---------------------------EECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHH
T ss_pred             EEcCCCCE---------------------------EEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHH
Confidence            99877654                           555555544332221     1235788899999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhcc
Q 013678          301 LWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR  379 (438)
Q Consensus       301 iwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (438)
                      ||||||++|+|++ |..||.+.........+......                                           
T Consensus       230 i~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~-------------------------------------------  266 (313)
T 1t46_A          230 VWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR-------------------------------------------  266 (313)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCC-------------------------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCC-------------------------------------------
Confidence            9999999999999 99999876544333322211000                                           


Q ss_pred             chhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       380 ~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                           ......++.++.+||.+||+.||.+|||+.|++++
T Consensus       267 -----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          267 -----MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence                 01123456789999999999999999999999874

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=6.9e-46  Score=346.80  Aligned_cols=249  Identities=24%  Similarity=0.327  Sum_probs=194.2

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCC---CcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      +...++|++.+.||+|+||.||+|.+..+   +..||+|++...  ....+.+.+|+.+++.++|+||     +++++++
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~   85 (281)
T 1mp8_A           11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI-----VKLIGVI   85 (281)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEE
T ss_pred             EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCcc-----ceEEEEE
Confidence            34567999999999999999999998654   457999998643  3345678899999999988777     9999988


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      . ++..|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.         
T Consensus        86 ~-~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~---------  154 (281)
T 1mp8_A           86 T-ENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC---------  154 (281)
T ss_dssp             C-SSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE---------
T ss_pred             c-cCccEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCC---------
Confidence            5 46789999999 889999998654 46999999999999999999999999999999999999987664         


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEA  316 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~  316 (438)
                                        +||+|||++.......    ....+|+.|+|||++.+..++.++|||||||++|+|++ |..
T Consensus       155 ------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~  216 (281)
T 1mp8_A          155 ------------------VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK  216 (281)
T ss_dssp             ------------------EEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ------------------EEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCC
Confidence                              5666666655433221    22356788999999999999999999999999999997 999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||.+....+....+....                       .                          ......+++.+.
T Consensus       217 pf~~~~~~~~~~~i~~~~-----------------------~--------------------------~~~~~~~~~~l~  247 (281)
T 1mp8_A          217 PFQGVKNNDVIGRIENGE-----------------------R--------------------------LPMPPNCPPTLY  247 (281)
T ss_dssp             TTTTCCGGGHHHHHHTTC-----------------------C--------------------------CCCCTTCCHHHH
T ss_pred             CCCcCCHHHHHHHHHcCC-----------------------C--------------------------CCCCCCCCHHHH
Confidence            998876655444432210                       0                          011234577899


Q ss_pred             HHHHHccccCCCCCCCHHHHhcC
Q 013678          397 DLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      +||.+||+.||++|||+.|++++
T Consensus       248 ~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          248 SLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHHH
Confidence            99999999999999999999863

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.7e-46  Score=357.85  Aligned_cols=264  Identities=21%  Similarity=0.208  Sum_probs=194.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC----C
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR----N  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~----~  166 (438)
                      .++|++.++||+|+||.||+|++.  ++.||||++...........+|+.++..++|+||     +++++++...    .
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~~~~~~   95 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENI-----LQFIGAEKRGTSVDV   95 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTB-----CCEEEEEEEECSSSE
T ss_pred             hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCc-----hhhcceeccCCCCCc
Confidence            368999999999999999999865  7899999998766666667778988888887776     9999998864    3


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC----------CceecCCCCCcEEEecCccccc
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL----------RLIHTDLKPENILLVSAEYVKV  235 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~----------~ivHrDlkp~NIli~~~~~~kl  235 (438)
                      .+|+||||+ +++|.+++...   .+++..++.++.||+.||+|||++          ||+||||||+|||++.++    
T Consensus        96 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~----  168 (322)
T 3soc_A           96 DLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNL----  168 (322)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTC----
T ss_pred             eEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCC----
Confidence            589999999 89999999875   499999999999999999999999          999999999999997655    


Q ss_pred             CCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCC-----CCCcchhHHHHH
Q 013678          236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGL-----GWNYPCDLWSVG  305 (438)
Q Consensus       236 ~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlG  305 (438)
                                             .+||+|||++......     .....||+.|+|||++.+.     .++.++||||||
T Consensus       169 -----------------------~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG  225 (322)
T 3soc_A          169 -----------------------TACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMG  225 (322)
T ss_dssp             -----------------------CEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred             -----------------------eEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHH
Confidence                                   5677777776543222     2225789999999999874     356789999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhh
Q 013678          306 CILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  385 (438)
Q Consensus       306 ~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (438)
                      |++|||++|..||.+..+......................      ..........+                   .  .
T Consensus       226 ~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-------------------~--~  278 (322)
T 3soc_A          226 LVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEV------VVHKKKRPVLR-------------------D--Y  278 (322)
T ss_dssp             HHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHH------HTTSCCCCCCC-------------------G--G
T ss_pred             HHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhh------hhcccCCCCcc-------------------c--c
Confidence            9999999999999765432111111111111110000000      00000000000                   0  0


Q ss_pred             hccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       386 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ......+.++.+||.+||+.||++|||+.|+++
T Consensus       279 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          279 WQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             GGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            001123456999999999999999999999986

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=8.1e-46  Score=348.76  Aligned_cols=265  Identities=23%  Similarity=0.320  Sum_probs=198.7

Q ss_pred             CccCCceEEEeeeeeecceEEEEEE----ECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      +...++|+++++||+|+||.||+|+    +..+++.||||++.... ...+.+.+|+.+++.++|+||     +++++++
T Consensus         6 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~   80 (295)
T 3ugc_A            6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI-----VKYKGVC   80 (295)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEE
T ss_pred             cCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEE
Confidence            3456899999999999999999998    66789999999987543 345678899999999988877     9999987


Q ss_pred             cc--CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          163 DY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       163 ~~--~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                      ..  ...+++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.       
T Consensus        81 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~-------  152 (295)
T 3ugc_A           81 YSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR-------  152 (295)
T ss_dssp             CHHHHTSCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE-------
T ss_pred             ecCCCCceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCe-------
Confidence            54  45699999999 999999998754 35999999999999999999999999999999999999987764       


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  313 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt  313 (438)
                                          +||+|||++.......      ....+|..|+|||++.+..++.++|||||||++|+|++
T Consensus       153 --------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~  212 (295)
T 3ugc_A          153 --------------------VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT  212 (295)
T ss_dssp             --------------------EEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_pred             --------------------EEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHh
Confidence                                5666666665433221      12356778999999999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchh
Q 013678          314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  393 (438)
Q Consensus       314 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (438)
                      |..||......     .....+..+.....                           ........ ........+..+++
T Consensus       213 g~~~~~~~~~~-----~~~~~~~~~~~~~~---------------------------~~~~~~~~-~~~~~~~~~~~~~~  259 (295)
T 3ugc_A          213 YIEKSKSPPAE-----FMRMIGNDKQGQMI---------------------------VFHLIELL-KNNGRLPRPDGCPD  259 (295)
T ss_dssp             TTCTTCSHHHH-----HHHHHCTTCCTHHH---------------------------HHHHHHHH-HTTCCCCCCTTCCH
T ss_pred             cccccCCChHH-----HHhhhcCccccchh---------------------------HHHHHHHH-hccCcCCCCcCcCH
Confidence            99998643211     11111111110000                           00000000 00001122345678


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ++.+||.+||+.||++|||+.|+++
T Consensus       260 ~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          260 EIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHH
Confidence            9999999999999999999999985

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.8e-45  Score=353.98  Aligned_cols=250  Identities=20%  Similarity=0.278  Sum_probs=199.3

Q ss_pred             CCceEEEeeeeeecceEEEEEEE-----CCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHH-HhcCCCCcceEEeccee
Q 013678           91 TPRCKILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~  162 (438)
                      .++|++.+.||+|+||.||+|.+     ..+++.||||++...  ....+.+.+|+.++..+ .|+||     +++++++
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i-----v~~~~~~  118 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI-----VNLLGAC  118 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTB-----CCEEEEE
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCe-----eeEEEEE
Confidence            47899999999999999999997     346678999999743  23456788999999999 78777     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNSY---------------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDL  220 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  220 (438)
                      ...+..++||||+ +++|.+++.....                     ..+++..++.++.||+.||+|||++||+||||
T Consensus       119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Di  198 (344)
T 1rjb_A          119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL  198 (344)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            9999999999999 9999999986542                     23799999999999999999999999999999


Q ss_pred             CCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCC
Q 013678          221 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGW  295 (438)
Q Consensus       221 kp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~  295 (438)
                      ||+|||++.++.                           +||+|||++.......     ....||+.|+|||++.+..+
T Consensus       199 kp~NIll~~~~~---------------------------~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  251 (344)
T 1rjb_A          199 AARNVLVTHGKV---------------------------VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIY  251 (344)
T ss_dssp             SGGGEEEETTTE---------------------------EEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCC
T ss_pred             ChhhEEEcCCCc---------------------------EEeCCCccCcccccCccceeccCccCccCccCHHHhccCCC
Confidence            999999987765                           5555555554332221     12467889999999999999


Q ss_pred             CcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHH
Q 013678          296 NYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV  374 (438)
Q Consensus       296 ~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (438)
                      +.++|||||||++|+|++ |..||.+.........+.....                                       
T Consensus       252 ~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~---------------------------------------  292 (344)
T 1rjb_A          252 TIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGF---------------------------------------  292 (344)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTC---------------------------------------
T ss_pred             ChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCC---------------------------------------
Confidence            999999999999999998 9999987654433332221100                                       


Q ss_pred             HHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCC
Q 013678          375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHP  420 (438)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp  420 (438)
                               .......+++++.+||.+||+.||.+|||+.|+++|-
T Consensus       293 ---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l  329 (344)
T 1rjb_A          293 ---------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL  329 (344)
T ss_dssp             ---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             ---------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence                     0011234567899999999999999999999999863

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=4.3e-46  Score=355.92  Aligned_cols=258  Identities=20%  Similarity=0.283  Sum_probs=206.9

Q ss_pred             CccCCceEEEeeeeeecceEEEEEE-----ECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecc
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECF-----DNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~  160 (438)
                      +...++|++.+.||+|+||.||+|+     +..+++.||||++...  ......+.+|+.+++.+.|+||     +++++
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~  100 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI-----VRCIG  100 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTB-----CCEEE
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCC-----CeEEE
Confidence            4556899999999999999999998     5567889999998642  3445678899999999988777     99999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSY-----RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  234 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  234 (438)
                      ++.+.+..|+||||+ +++|.+++.....     ..+++..++.++.||+.||.|||++||+||||||+|||++.++   
T Consensus       101 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~---  177 (327)
T 2yfx_A          101 VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG---  177 (327)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS---
T ss_pred             EEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCC---
Confidence            999999999999999 9999999987532     3589999999999999999999999999999999999997543   


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC-----CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHH
Q 013678          235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  309 (438)
Q Consensus       235 l~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  309 (438)
                                           ....++|+|||++.....     ......||+.|+|||++.+..++.++|||||||++|
T Consensus       178 ---------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  236 (327)
T 2yfx_A          178 ---------------------PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW  236 (327)
T ss_dssp             ---------------------TTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             ---------------------CcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHH
Confidence                                 233578888887764322     122346789999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhcc
Q 013678          310 ELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  388 (438)
Q Consensus       310 ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (438)
                      +|++ |..||......+....+.....                                                 ....
T Consensus       237 ellt~g~~p~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~  267 (327)
T 2yfx_A          237 EIFSLGYMPYPSKSNQEVLEFVTSGGR-------------------------------------------------MDPP  267 (327)
T ss_dssp             HHHTTSCCSSTTCCHHHHHHHHHTTCC-------------------------------------------------CCCC
T ss_pred             HHHcCCCCCCCCcCHHHHHHHHhcCCC-------------------------------------------------CCCC
Confidence            9998 9999988776655444322110                                                 0112


Q ss_pred             CCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCC
Q 013678          389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT  423 (438)
Q Consensus       389 ~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~  423 (438)
                      ..++..+.+||.+||+.||.+|||+.++++|.|+-
T Consensus       268 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          268 KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            34567899999999999999999999999997753

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=2e-46  Score=370.85  Aligned_cols=255  Identities=23%  Similarity=0.285  Sum_probs=194.5

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccCCeEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      .+|++.+.||+|+||+||. ....+++.||||++....  ...+.+|+.+++.+ .|+||     +++++++.+.+..||
T Consensus        24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnI-----v~l~~~~~~~~~~~l   95 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPEC--FSFADREVQLLRESDEHPNV-----IRYFCTEKDRQFQYI   95 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTT--EEECHHHHHHHHHSCCCTTB-----CCEEEEEEETTEEEE
T ss_pred             EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhccCCCCc-----CeEEEEEecCCEEEE
Confidence            4799999999999999764 345678999999986432  23456799999998 57766     999999999999999


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       171 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||||+++|.+++.... ..+.+..+..++.||+.||+|||++||+||||||+|||++.++.                  
T Consensus        96 v~E~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~------------------  156 (432)
T 3p23_A           96 AIELCAATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNA------------------  156 (432)
T ss_dssp             EEECCSEEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBT------------------
T ss_pred             EEECCCCCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCC------------------
Confidence            99999889999998654 34555567899999999999999999999999999999965331                  


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCC------CcccccCCCcchhHHHhC---CCCCcchhHHHHHHHHHHHHh-CCCCCCC
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCS-GEALFQT  320 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~ellt-g~~pf~~  320 (438)
                          +....+||+|||++......      ....+||+.|+|||++.+   ..++.++|||||||++|+|++ |..||..
T Consensus       157 ----~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~  232 (432)
T 3p23_A          157 ----HGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK  232 (432)
T ss_dssp             ----TTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBS
T ss_pred             ----CCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcch
Confidence                22346789999988765422      233579999999999984   457889999999999999999 9999965


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      ........ +   .+...                    ...                       .......+..+.+||.
T Consensus       233 ~~~~~~~~-~---~~~~~--------------------~~~-----------------------~~~~~~~~~~~~~li~  265 (432)
T 3p23_A          233 SLQRQANI-L---LGACS--------------------LDC-----------------------LHPEKHEDVIARELIE  265 (432)
T ss_dssp             TTTHHHHH-H---TTCCC--------------------CTT-----------------------SCTTCHHHHHHHHHHH
T ss_pred             hhHHHHHH-H---hccCC--------------------ccc-----------------------cCccccccHHHHHHHH
Confidence            44332211 1   11000                    000                       0000122456889999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCC
Q 013678          401 GLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      +||+.||++|||+.|+++||||.+
T Consensus       266 ~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          266 KMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             HHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             HHHhCCHhhCCCHHHHHhCccccC
Confidence            999999999999999999999975

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=9.1e-47  Score=370.00  Aligned_cols=281  Identities=21%  Similarity=0.313  Sum_probs=205.3

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ..+.++|++.+.||+|+||.||+|++..+++.||||+++...  ...+.+.+|+.+++.++|+||     +++++++...
T Consensus         5 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~~~~~~~~~   79 (396)
T 4eut_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNI-----VKLFAIEEET   79 (396)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTB-----CCEEEEEECT
T ss_pred             CCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCC-----CeEEEeeccC
Confidence            456789999999999999999999999999999999997533  334677899999999988877     9999988765


Q ss_pred             C--eEEEEEccC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          166 N--HICIVFEKL-GPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       166 ~--~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      +  ..|+||||| +++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||+....          
T Consensus        80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~----------  149 (396)
T 4eut_A           80 TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE----------  149 (396)
T ss_dssp             TTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECT----------
T ss_pred             CCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecC----------
Confidence            4  889999999 899999997643 22399999999999999999999999999999999999983321          


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhC--------CCCCcchhHHHHHHHHHHH
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILG--------LGWNYPCDLWSVGCILVEL  311 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlG~il~el  311 (438)
                                   +....+||+|||++.......  ....||..|+|||++.+        ..++.++|||||||++|||
T Consensus       150 -------------~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el  216 (396)
T 4eut_A          150 -------------DGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA  216 (396)
T ss_dssp             -------------TSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------------CCceeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHH
Confidence                         123357888888876543322  23579999999999875        4577899999999999999


Q ss_pred             HhCCCCCCCCCh-HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCC
Q 013678          312 CSGEALFQTHEN-LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH  390 (438)
Q Consensus       312 ltg~~pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (438)
                      ++|..||..... ......+.+.....|..........      ......|......                .......
T Consensus       217 ~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~------~~~~~~~~~~~~~----------------~~~l~~~  274 (396)
T 4eut_A          217 ATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKA------ENGPIDWSGDMPV----------------SCSLSRG  274 (396)
T ss_dssp             HHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECS------TTCCEEEESSCCT----------------TCSSCHH
T ss_pred             HHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheec------cCCCcccCccCCc----------------ccccchH
Confidence            999999965322 1122223333322222111000000      0001111110000                0011123


Q ss_pred             chhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          391 SAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       391 ~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ++..+.+||.+||++||++|||+.|+++
T Consensus       275 ~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          275 LQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             HHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             HHhhchHHHHHhhccChhhhccHHHHHH
Confidence            4568899999999999999999999854

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=1.9e-45  Score=349.79  Aligned_cols=254  Identities=26%  Similarity=0.347  Sum_probs=185.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh--hH-HHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YR-EAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~-~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      .++|++++.||+|+||.||+|.+..+++.||||++.....  .. +.+..+..+++.+.|+||     +++++++.+.+.
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i-----~~~~~~~~~~~~   98 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYI-----VQCFGTFITNTD   98 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTB-----CCEEEEEECSSE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCce-----eeEEEEEecCCc
Confidence            3689999999999999999999999999999999975432  22 223334445555666655     999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|+||||+++.+..+..... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.++               
T Consensus        99 ~~lv~e~~~~~~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~---------------  162 (318)
T 2dyl_A           99 VFIAMELMGTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG---------------  162 (318)
T ss_dssp             EEEEECCCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTS---------------
T ss_pred             EEEEEeccCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCC---------------
Confidence            99999999777776665432 4799999999999999999999995 999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHh-----CCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                  .+||+|||++......  .....||+.|+|||++.     +..++.++|||||||++|+|++|..||.
T Consensus       163 ------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  230 (318)
T 2dyl_A          163 ------------QIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYK  230 (318)
T ss_dssp             ------------CEEECCCTTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             ------------CEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCC
Confidence                        5677777776543322  22347899999999995     4568899999999999999999999998


Q ss_pred             CCC-hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          320 THE-NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       320 ~~~-~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      ... ..+.+..+....  .+                     .                        ......++.++.+|
T Consensus       231 ~~~~~~~~~~~~~~~~--~~---------------------~------------------------~~~~~~~~~~l~~l  263 (318)
T 2dyl_A          231 NCKTDFEVLTKVLQEE--PP---------------------L------------------------LPGHMGFSGDFQSF  263 (318)
T ss_dssp             TCCSHHHHHHHHHHSC--CC---------------------C------------------------CCSSSCCCHHHHHH
T ss_pred             CCCccHHHHHHHhccC--CC---------------------C------------------------CCccCCCCHHHHHH
Confidence            643 333333332210  00                     0                        00112456789999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          399 LQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      |.+||+.||.+|||+.|+++||||++
T Consensus       264 i~~~l~~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          264 VKDCLTKDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             HHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred             HHHHccCChhHCcCHHHHhhCHHHHh
Confidence            99999999999999999999999975

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=9.8e-46  Score=359.49  Aligned_cols=246  Identities=23%  Similarity=0.317  Sum_probs=193.7

Q ss_pred             CCceEEEeeeeeecceEEEEEEEC---CCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ..+|++.+.||+|+||.||+|++.   .++..||||+++..  ....+.+.+|+.++.+++|+||     +++++++.+.
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~  118 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI-----IRLEGVVTKS  118 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEECSS
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEeeC
Confidence            468999999999999999999876   46778999998753  3445678899999999988777     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++             
T Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-------------  184 (373)
T 2qol_A          119 KPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL-------------  184 (373)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-------------
T ss_pred             CceEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCC-------------
Confidence            9999999999 999999998654 4699999999999999999999999999999999999997665             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCCc------ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEAL  317 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~p  317 (438)
                                    .+||+|||++........      ...+|..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       185 --------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P  250 (373)
T 2qol_A          185 --------------VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP  250 (373)
T ss_dssp             --------------CEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CT
T ss_pred             --------------CEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCC
Confidence                          466666666654332211      1245678999999999999999999999999999998 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |...+..+....+.....                                                 ......++..+.+
T Consensus       251 ~~~~~~~~~~~~i~~~~~-------------------------------------------------~~~~~~~~~~l~~  281 (373)
T 2qol_A          251 YWEMSNQDVIKAVDEGYR-------------------------------------------------LPPPMDCPAALYQ  281 (373)
T ss_dssp             TTTCCHHHHHHHHHTTEE-------------------------------------------------CCCCTTCBHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCC-------------------------------------------------CCCCccccHHHHH
Confidence            988776655544432110                                                 0112245678999


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 013678          398 LLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ||.+||+.||++|||+.++++
T Consensus       282 li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          282 LMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhCcChhhCcCHHHHHH
Confidence            999999999999999998875

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=4.1e-45  Score=365.10  Aligned_cols=259  Identities=20%  Similarity=0.268  Sum_probs=201.3

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ..+.++|++.++||+|+||.||+|++..+++.||||++.... ....+.+|+.+++.|.|++.    +..+..++...+.
T Consensus         3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~~~----i~~i~~~~~~~~~   77 (483)
T 3sv0_A            3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGGTG----IPNVRWFGVEGDY   77 (483)
T ss_dssp             CEETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTSTT----CCCEEEEEEETTE
T ss_pred             CCcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCCCC----CCeEEEEEeeCCE
Confidence            356789999999999999999999999999999999886533 23457889999999988643    3445556667889


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      .||||||++++|.+++.... ..+++..++.|+.||+.||+|||++||+||||||+||||+..                 
T Consensus        78 ~~lvme~~g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~-----------------  139 (483)
T 3sv0_A           78 NVLVMDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG-----------------  139 (483)
T ss_dssp             EEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCG-----------------
T ss_pred             EEEEEECCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecC-----------------
Confidence            99999999999999998643 479999999999999999999999999999999999999421                 


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCC----------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH----------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                             +....+||+|||++.......          ....||..|+|||++.+..++.++|||||||+||||++|..|
T Consensus       140 -------~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~P  212 (483)
T 3sv0_A          140 -------RRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP  212 (483)
T ss_dssp             -------GGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             -------CCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCC
Confidence                   123357777777776543321          245799999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+.........+..+..                                          .............++.++.+
T Consensus       213 f~~~~~~~~~~~~~~i~~------------------------------------------~~~~~~~~~l~~~~p~~l~~  250 (483)
T 3sv0_A          213 WQGLKAGTKKQKYEKISE------------------------------------------KKVATSIEALCRGYPTEFAS  250 (483)
T ss_dssp             TSSCCCSSHHHHHHHHHH------------------------------------------HHHHSCHHHHHTTSCHHHHH
T ss_pred             CccccchhHHHHHHHHhh------------------------------------------ccccccHHHHhcCCcHHHHH
Confidence            987544222222211100                                          00000111122355779999


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 013678          398 LLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ||.+||+.||++||++.+|++
T Consensus       251 li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          251 YFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHhcCChhhCcCHHHHHH
Confidence            999999999999999987654

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=1.1e-45  Score=368.65  Aligned_cols=247  Identities=25%  Similarity=0.377  Sum_probs=204.6

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ...++|++.++||+|+||.||+|.+. ++..||||+++......+.+.+|+.+++.++|+||     +++++++. .+.+
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~l~~~~~-~~~~  257 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKL-----VKLHAVVT-KEPI  257 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTB-----CCEEEEEC-SSSC
T ss_pred             echHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCE-----eeEEEEEe-CCcc
Confidence            34578999999999999999999985 46779999998766667889999999999988877     99999886 5678


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      ||||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++                
T Consensus       258 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~----------------  321 (454)
T 1qcf_A          258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL----------------  321 (454)
T ss_dssp             EEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTC----------------
T ss_pred             EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCC----------------
Confidence            9999999 99999999864334689999999999999999999999999999999999997655                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHE  322 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~  322 (438)
                                 .+||+|||++......    .....+|..|+|||++....++.++|||||||++|||++ |..||.+.+
T Consensus       322 -----------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~  390 (454)
T 1qcf_A          322 -----------VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS  390 (454)
T ss_dssp             -----------CEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             -----------cEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC
Confidence                       5677777776654321    122346778999999999999999999999999999999 999999887


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ..+....+.....                                                 ...+..+++++.+||.+|
T Consensus       391 ~~~~~~~i~~~~~-------------------------------------------------~~~~~~~~~~l~~li~~c  421 (454)
T 1qcf_A          391 NPEVIRALERGYR-------------------------------------------------MPRPENCPEELYNIMMRC  421 (454)
T ss_dssp             HHHHHHHHHHTCC-------------------------------------------------CCCCTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCC-------------------------------------------------CCCCCCCCHHHHHHHHHH
Confidence            7766655543210                                                 011234567899999999


Q ss_pred             cccCCCCCCCHHHHhc
Q 013678          403 LRYDPAERLKAREALR  418 (438)
Q Consensus       403 L~~dP~~Rpta~ell~  418 (438)
                      |+.||++|||+++|++
T Consensus       422 l~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          422 WKNRPEERPTFEYIQS  437 (454)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             ccCChhHCcCHHHHHH
Confidence            9999999999999875

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=6.3e-45  Score=348.88  Aligned_cols=248  Identities=18%  Similarity=0.306  Sum_probs=201.6

Q ss_pred             CCceEEEeeeeeecceEEEEEEEC-------CCCcEEEEEEeecc--hhhHHHHHHHHHHHHHH-HhcCCCCcceEEecc
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDN-------EKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRN  160 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~  160 (438)
                      .++|++.+.||+|+||.||+|++.       .+++.||||+++..  ....+.+.+|+.+++.+ .|+||     +++++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i-----v~~~~  108 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI-----INLLG  108 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCEEE
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCE-----eeEEE
Confidence            478999999999999999999975       45678999999753  23456788999999999 77776     99999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSY--------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  225 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  225 (438)
                      ++.+.+.+|+||||+ +++|.+++.....              ..+++..++.++.||+.||.|||++||+||||||+||
T Consensus       109 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI  188 (334)
T 2pvf_A          109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV  188 (334)
T ss_dssp             EECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred             EEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceE
Confidence            999999999999999 8999999986531              2489999999999999999999999999999999999


Q ss_pred             EEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchh
Q 013678          226 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCD  300 (438)
Q Consensus       226 li~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D  300 (438)
                      |++.++                           .+||+|||++.......     ....+|+.|+|||++.+..++.++|
T Consensus       189 ll~~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  241 (334)
T 2pvf_A          189 LVTENN---------------------------VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  241 (334)
T ss_dssp             EECTTC---------------------------CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHH
T ss_pred             EEcCCC---------------------------CEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHH
Confidence            997665                           46666777665443221     2235678899999999988999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhcc
Q 013678          301 LWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR  379 (438)
Q Consensus       301 iwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (438)
                      ||||||++|+|++ |..||.+....+....+.....                                            
T Consensus       242 i~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~--------------------------------------------  277 (334)
T 2pvf_A          242 VWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR--------------------------------------------  277 (334)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCC--------------------------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCC--------------------------------------------
Confidence            9999999999999 9999988776655444432110                                            


Q ss_pred             chhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       380 ~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                           ......++.++.+||.+||+.||.+|||+.|++++
T Consensus       278 -----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          278 -----MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                 01123456789999999999999999999999864

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=1.9e-45  Score=346.99  Aligned_cols=251  Identities=22%  Similarity=0.283  Sum_probs=188.6

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHH--HHhcCCCCcceEEecceecc
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR--LARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~--l~~~~i~~~~iv~~~~~~~~  164 (438)
                      ++.+.++|++.+.||+|+||.||+|.+  +++.||||++....  ...+.+|.+++..  ++|+||     +++++++..
T Consensus         3 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~ni-----v~~~~~~~~   73 (301)
T 3q4u_A            3 QRTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENI-----LGFIASDMT   73 (301)
T ss_dssp             -CCCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTB-----CCEEEEEEE
T ss_pred             cccccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCe-----eeEEEeecc
Confidence            456778999999999999999999986  68899999987543  3455667777766  566655     899887543


Q ss_pred             ----CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCceecCCCCCcEEEecCc
Q 013678          165 ----RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH--------ELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       165 ----~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH--------~~~ivHrDlkp~NIli~~~~  231 (438)
                          ...+|+||||+ +++|.++++..   .+++..+..++.||+.||+|||        ++||+||||||+|||++.++
T Consensus        74 ~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~  150 (301)
T 3q4u_A           74 SRHSSTQLWLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG  150 (301)
T ss_dssp             EETTEEEEEEEECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTS
T ss_pred             ccCCCceeEEehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCC
Confidence                45799999999 89999999653   5999999999999999999999        99999999999999997655


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-------cccccCCCcchhHHHhCC------CCCcc
Q 013678          232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-------SYVVSTRHYRAPEVILGL------GWNYP  298 (438)
Q Consensus       232 ~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~------~~~~~  298 (438)
                                                 .+||+|||++.......       ....||+.|+|||++.+.      .++.+
T Consensus       151 ---------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  203 (301)
T 3q4u_A          151 ---------------------------QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKR  203 (301)
T ss_dssp             ---------------------------CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHH
T ss_pred             ---------------------------CEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCch
Confidence                                       46677777665433221       224799999999999876      34579


Q ss_pred             hhHHHHHHHHHHHHhC----------CCCCCCCCh----HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCC
Q 013678          299 CDLWSVGCILVELCSG----------EALFQTHEN----LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDG  364 (438)
Q Consensus       299 ~DiwSlG~il~elltg----------~~pf~~~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (438)
                      +|||||||++|||++|          ..||.....    ......+....+..                     ...+. 
T Consensus       204 ~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~-  261 (301)
T 3q4u_A          204 VDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQR---------------------PNIPN-  261 (301)
T ss_dssp             HHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCC---------------------CCCCG-
T ss_pred             hhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCC---------------------CCCCh-
Confidence            9999999999999999          788754321    11111111100000                     00000 


Q ss_pred             CCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          365 ATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                                          .......+.++.+||.+||+.||++|||+.|+++
T Consensus       262 --------------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          262 --------------------RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             --------------------GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             --------------------hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence                                0011234568999999999999999999999986

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=1.9e-45  Score=350.61  Aligned_cols=252  Identities=21%  Similarity=0.320  Sum_probs=205.7

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEEC-----CCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEec
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIR  159 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~  159 (438)
                      .+...++|++.+.||+|+||.||+|.+.     .+++.||||++....  .....+.+|+.+++.+.|+||     ++++
T Consensus        20 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~   94 (322)
T 1p4o_A           20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV-----VRLL   94 (322)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTB-----CCEE
T ss_pred             hcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCE-----eeeE
Confidence            3455689999999999999999999876     457889999997533  344567899999999988776     9999


Q ss_pred             ceeccCCeEEEEEccC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecC
Q 013678          160 NWFDYRNHICIVFEKL-GPSLYDFLRKNS--------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  230 (438)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~  230 (438)
                      +++.+.+..++||||+ +++|.+++....        ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~  174 (322)
T 1p4o_A           95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED  174 (322)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTT
T ss_pred             EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCC
Confidence            9999999999999999 899999997532        1357999999999999999999999999999999999999765


Q ss_pred             cccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHH
Q 013678          231 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVG  305 (438)
Q Consensus       231 ~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  305 (438)
                      +                           .+||+|||++.......     ....||+.|+|||++.+..++.++||||||
T Consensus       175 ~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  227 (322)
T 1p4o_A          175 F---------------------------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG  227 (322)
T ss_dssp             C---------------------------CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             C---------------------------eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHH
Confidence            5                           56777777776443221     223568899999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhh
Q 013678          306 CILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI  384 (438)
Q Consensus       306 ~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (438)
                      |++|+|++ |..||.+.+..+....+....  .                                               
T Consensus       228 ~il~el~~~g~~p~~~~~~~~~~~~~~~~~--~-----------------------------------------------  258 (322)
T 1p4o_A          228 VVLWEIATLAEQPYQGLSNEQVLRFVMEGG--L-----------------------------------------------  258 (322)
T ss_dssp             HHHHHHHHTSCCTTTTSCHHHHHHHHHTTC--C-----------------------------------------------
T ss_pred             HHHHHHHhcCCCccccCCHHHHHHHHHcCC--c-----------------------------------------------
Confidence            99999999 899998877655544332210  0                                               


Q ss_pred             hhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       385 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      ......++..+.+||.+||+.||++|||+.|+++|
T Consensus       259 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          259 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            01123456789999999999999999999999987

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=3.4e-45  Score=341.64  Aligned_cols=247  Identities=25%  Similarity=0.370  Sum_probs=202.4

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ...++|++.+.||+|+||.||+|.+. +++.||+|++.......+.+.+|+.+++.++|+|+     +++++++.. +..
T Consensus        10 v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~-~~~   82 (279)
T 1qpc_A           10 VPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL-----VRLYAVVTQ-EPI   82 (279)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTB-----CCEEEEECS-SSC
T ss_pred             cCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCc-----ceEEEEEcC-CCc
Confidence            34578999999999999999999975 56789999998766667788999999999988877     999998764 568


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      ++||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+||+++.++                
T Consensus        83 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~----------------  146 (279)
T 1qpc_A           83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL----------------  146 (279)
T ss_dssp             EEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS----------------
T ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCC----------------
Confidence            9999999 99999999754323699999999999999999999999999999999999997655                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHE  322 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~  322 (438)
                                 .+||+|||++.......    ....+|..|+|||++.+..++.++|||||||++|+|++ |..||.+.+
T Consensus       147 -----------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~  215 (279)
T 1qpc_A          147 -----------SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT  215 (279)
T ss_dssp             -----------CEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             -----------CEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC
Confidence                       56777777766543322    12356788999999998889999999999999999999 999998877


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ..+....+.....                                                 ......++.++.+||.+|
T Consensus       216 ~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~l~~li~~~  246 (279)
T 1qpc_A          216 NPEVIQNLERGYR-------------------------------------------------MVRPDNCPEELYQLMRLC  246 (279)
T ss_dssp             HHHHHHHHHTTCC-------------------------------------------------CCCCTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHhcccC-------------------------------------------------CCCcccccHHHHHHHHHH
Confidence            6655444322100                                                 011234567899999999


Q ss_pred             cccCCCCCCCHHHHhc
Q 013678          403 LRYDPAERLKAREALR  418 (438)
Q Consensus       403 L~~dP~~Rpta~ell~  418 (438)
                      |+.||++|||+.++++
T Consensus       247 l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          247 WKERPEDRPTFDYLRS  262 (279)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             hccChhhCCCHHHHHH
Confidence            9999999999999875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=7.2e-46  Score=354.07  Aligned_cols=246  Identities=21%  Similarity=0.266  Sum_probs=195.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcE----EEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKEL----VAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      .++|++++.||+|+||.||+|.+..+++.    ||+|.+....  .....+.+|+.++..++|+||     +++++++..
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~   86 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI-----VRLLGLCPG   86 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTB-----CCEEEEECB
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCc-----CeEEEEEcC
Confidence            47899999999999999999999888876    6777764322  223456789999999888777     999998864


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                       +..++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++            
T Consensus        87 -~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~------------  152 (325)
T 3kex_A           87 -SSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPS------------  152 (325)
T ss_dssp             -SSEEEEEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSS------------
T ss_pred             -CccEEEEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCC------------
Confidence             5689999999 999999997643 4689999999999999999999999999999999999997665            


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEAL  317 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~p  317 (438)
                                     .+||+|||++......     .....||..|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus       153 ---------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p  217 (325)
T 3kex_A          153 ---------------QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP  217 (325)
T ss_dssp             ---------------CEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ---------------eEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCC
Confidence                           4666666666543222     123467889999999999999999999999999999999 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+....+....+....                       .                          ......++.++.+
T Consensus       218 ~~~~~~~~~~~~~~~~~-----------------------~--------------------------~~~~~~~~~~~~~  248 (325)
T 3kex_A          218 YAGLRLAEVPDLLEKGE-----------------------R--------------------------LAQPQICTIDVYM  248 (325)
T ss_dssp             TTTSCTTHHHHHHHTTC-----------------------B--------------------------CCCCTTBCTTTTH
T ss_pred             ccccCHHHHHHHHHcCC-----------------------C--------------------------CCCCCcCcHHHHH
Confidence            98766555443332210                       0                          0111234567889


Q ss_pred             HHHHccccCCCCCCCHHHHhcC
Q 013678          398 LLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      ||.+||+.||++|||+.|+++|
T Consensus       249 li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          249 VMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             HHHHHTCSCTTTSCCHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999876

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.6e-45  Score=349.42  Aligned_cols=245  Identities=20%  Similarity=0.276  Sum_probs=195.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEE----EEEEeec--chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELV----AIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~v----aiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      .++|++++.||+|+||.||+|++..+++.|    |+|.+..  .....+.+.+|+.+++.++|+||     +++++++..
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~   88 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV-----CRLLGICLT   88 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTB-----CCCCEEEES
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCe-----eEEEEEEec
Confidence            478999999999999999999998888765    6666543  23356778899999999988877     999999887


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      +. .++||+|+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.           
T Consensus        89 ~~-~~~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~-----------  155 (327)
T 3lzb_A           89 ST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-----------  155 (327)
T ss_dssp             SS-EEEEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTE-----------
T ss_pred             CC-ceEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCC-----------
Confidence            55 78899999 999999998754 46999999999999999999999999999999999999987664           


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEAL  317 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~p  317 (438)
                                      +||+|||++.......     ....+|..|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus       156 ----------------~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p  219 (327)
T 3lzb_A          156 ----------------VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP  219 (327)
T ss_dssp             ----------------EEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ----------------EEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCC
Confidence                            5666666665432221     12356788999999999999999999999999999999 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+....+....+.....                                                 ......++.++.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~l~~  250 (327)
T 3lzb_A          220 YDGIPASEISSILEKGER-------------------------------------------------LPQPPICTIDVYM  250 (327)
T ss_dssp             TTTCCGGGHHHHHHTTCC-------------------------------------------------CCCCTTBCHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCC-------------------------------------------------CCCCccCCHHHHH
Confidence            988766554433322110                                                 0112345678999


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 013678          398 LLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ||.+||+.||.+|||+.|+++
T Consensus       251 li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          251 IMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999999986

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=4.4e-45  Score=342.75  Aligned_cols=252  Identities=23%  Similarity=0.323  Sum_probs=192.6

Q ss_pred             cCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           86 IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      .++...++|++.++||+|+||.||+|.+..   .||+|+++..   ....+.+.+|+.+++.++|+|+     ++++++.
T Consensus        18 ~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~   89 (289)
T 3og7_A           18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI-----LLFMGYS   89 (289)
T ss_dssp             CCBCCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEE
T ss_pred             CCccCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcE-----EEEEeec
Confidence            456778899999999999999999998643   4999998643   3345678899999999988877     8888855


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                       .....++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.         
T Consensus        90 -~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~---------  158 (289)
T 3og7_A           90 -TAPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT---------  158 (289)
T ss_dssp             -CSSSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTE---------
T ss_pred             -cCCccEEEEEecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCC---------
Confidence             456789999999 899999996543 46999999999999999999999999999999999999987664         


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCC-----CCcccccCCCcchhHHHh---CCCCCcchhHHHHHHHHHHHHh
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCS  313 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~ellt  313 (438)
                                        ++|+|||++.....     ......||+.|+|||++.   +..++.++|||||||++|+|++
T Consensus       159 ------------------~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~  220 (289)
T 3og7_A          159 ------------------VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT  220 (289)
T ss_dssp             ------------------EEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHH
T ss_pred             ------------------EEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHH
Confidence                              56666666553321     112347899999999997   5568899999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchh
Q 013678          314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  393 (438)
Q Consensus       314 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (438)
                      |..||......+.+..+.......+                                            ........+++
T Consensus       221 g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~  256 (289)
T 3og7_A          221 GQLPYSNINNRDQIIEMVGRGSLSP--------------------------------------------DLSKVRSNCPK  256 (289)
T ss_dssp             SSCTTSSCCCHHHHHHHHHHTSCCC--------------------------------------------CTTSSCTTSCH
T ss_pred             CCCCccccchHHHHHHHhcccccCc--------------------------------------------chhhccccCCH
Confidence            9999988766555444432211100                                            00111234577


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      .+.+||.+||+.||++|||+.++++
T Consensus       257 ~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          257 RMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHH
Confidence            8999999999999999999999986

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=3.7e-45  Score=339.49  Aligned_cols=244  Identities=15%  Similarity=0.146  Sum_probs=198.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC--
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~--  165 (438)
                      .++|++.+.||+|+||.||+|++.  ++.||||+++..   ....+.+.+|+.+++.++|+||     +++++++.+.  
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~   81 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV-----LPVLGACQSPPA   81 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTE-----ECEEEEECTTTS
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCch-----hheEEEEccCCC
Confidence            368999999999999999999974  888999999753   2345678899999998877766     9999999876  


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEecCcccccCCccccc
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      +..++||||+ +++|.+++.......+++..+..++.||+.||+|||++|  |+||||||+||+++.++.          
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~----------  151 (271)
T 3kmu_A           82 PHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMT----------  151 (271)
T ss_dssp             SSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSC----------
T ss_pred             CCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcc----------
Confidence            7899999999 899999998766556999999999999999999999999  999999999999977664          


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCC---cchhHHHHHHHHHHHHhCCCCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~DiwSlG~il~elltg~~pf~  319 (438)
                                       ++|+|||++....  .....||+.|+|||++.+..++   .++|||||||++|+|++|..||.
T Consensus       152 -----------------~~l~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~  212 (271)
T 3kmu_A          152 -----------------ARISMADVKFSFQ--SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFA  212 (271)
T ss_dssp             -----------------EEEEGGGSCCTTS--CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTT
T ss_pred             -----------------eeEEeccceeeec--ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence                             4555444443221  1234789999999999986544   48999999999999999999998


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      +.+..+....+......                                                ...+..+++++.+||
T Consensus       213 ~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~li  244 (271)
T 3kmu_A          213 DLSNMEIGMKVALEGLR------------------------------------------------PTIPPGISPHVSKLM  244 (271)
T ss_dssp             TSCHHHHHHHHHHSCCC------------------------------------------------CCCCTTCCHHHHHHH
T ss_pred             ccChHHHHHHHHhcCCC------------------------------------------------CCCCCCCCHHHHHHH
Confidence            87766654443221100                                                011234577899999


Q ss_pred             HHccccCCCCCCCHHHHhc
Q 013678          400 QGLLRYDPAERLKAREALR  418 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~  418 (438)
                      .+||+.||++|||+.|+++
T Consensus       245 ~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          245 KICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHcCCChhhCcCHHHHHH
Confidence            9999999999999999986

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=4e-46  Score=348.58  Aligned_cols=251  Identities=27%  Similarity=0.321  Sum_probs=203.0

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc--
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--  164 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--  164 (438)
                      +..+..+|++.+.||+|+||.||+|.+..+++.||+|+++...   +.+.+|+.+++.++|+|+     +++++++..  
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   77 (284)
T 2a19_B            6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNI-----VHYNGCWDGFD   77 (284)
T ss_dssp             CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTB-----CCEEEEEEEEE
T ss_pred             cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCE-----EEEeeeEeccc
Confidence            4567789999999999999999999999999999999997543   356789999999988877     888887753  


Q ss_pred             --------------CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 013678          165 --------------RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  229 (438)
Q Consensus       165 --------------~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  229 (438)
                                    ...+++||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  157 (284)
T 2a19_B           78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD  157 (284)
T ss_dssp             EC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE
T ss_pred             cCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcC
Confidence                          45689999999 889999998765457999999999999999999999999999999999999987


Q ss_pred             CcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHH
Q 013678          230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCI  307 (438)
Q Consensus       230 ~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i  307 (438)
                      ++                           .+||+|||++......  .....||+.|+|||++.+..++.++|||||||+
T Consensus       158 ~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  210 (284)
T 2a19_B          158 TK---------------------------QVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLI  210 (284)
T ss_dssp             TT---------------------------EEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHH
T ss_pred             CC---------------------------CEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHH
Confidence            66                           4566666666544322  233478999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhc
Q 013678          308 LVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH  387 (438)
Q Consensus       308 l~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (438)
                      +|+|++|..||...  ......+..                                                    ...
T Consensus       211 l~~l~~~~~~~~~~--~~~~~~~~~----------------------------------------------------~~~  236 (284)
T 2a19_B          211 LAELLHVCDTAFET--SKFFTDLRD----------------------------------------------------GII  236 (284)
T ss_dssp             HHHHHSCCSSHHHH--HHHHHHHHT----------------------------------------------------TCC
T ss_pred             HHHHHhcCCcchhH--HHHHHHhhc----------------------------------------------------ccc
Confidence            99999999887321  111100000                                                    001


Q ss_pred             cCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       388 ~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      ...++..+.+||.+||+.||++|||+.|+++|.|.-...
T Consensus       237 ~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          237 SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence            123567899999999999999999999999998765543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=2.6e-45  Score=365.61  Aligned_cols=253  Identities=26%  Similarity=0.356  Sum_probs=204.2

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      -.++|++.++||+|+||.||+|.+.. +..||||+++......+.+.+|+.+++.++|+||     +++++++.+ +.+|
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~-~~~~  254 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL-----VQLYAVVSE-EPIY  254 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTB-----CCEEEEECS-SSCE
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCE-----eeEEEEEcC-CceE
Confidence            34789999999999999999999865 4569999998765566789999999999988877     999998876 6789


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      |||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++                 
T Consensus       255 iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~-----------------  317 (452)
T 1fmk_A          255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL-----------------  317 (452)
T ss_dssp             EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-----------------
T ss_pred             EEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCC-----------------
Confidence            999999 89999999764334699999999999999999999999999999999999997665                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCh
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN  323 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~  323 (438)
                                .+||+|||++.......    ....+|..|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus       318 ----------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~  387 (452)
T 1fmk_A          318 ----------VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN  387 (452)
T ss_dssp             ----------CEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH
T ss_pred             ----------CEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH
Confidence                      46666666665433221    12356788999999999999999999999999999999 9999998777


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .+....+.....                                                 ...+..+++.+.+||.+||
T Consensus       388 ~~~~~~i~~~~~-------------------------------------------------~~~~~~~~~~l~~li~~cl  418 (452)
T 1fmk_A          388 REVLDQVERGYR-------------------------------------------------MPCPPECPESLHDLMCQCW  418 (452)
T ss_dssp             HHHHHHHHTTCC-------------------------------------------------CCCCTTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCC-------------------------------------------------CCCCCCCCHHHHHHHHHHc
Confidence            665554432110                                                 0112345678999999999


Q ss_pred             ccCCCCCCCHHHHhc--CCCCCCC
Q 013678          404 RYDPAERLKAREALR--HPFFTRD  425 (438)
Q Consensus       404 ~~dP~~Rpta~ell~--hp~f~~~  425 (438)
                      +.||++|||++++++  +.++...
T Consensus       419 ~~dP~~Rpt~~~l~~~L~~~~~~~  442 (452)
T 1fmk_A          419 RKEPEERPTFEYLQAFLEDYFTST  442 (452)
T ss_dssp             CSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             cCChhhCcCHHHHHHHHHHHhccC
Confidence            999999999999986  3666544

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.7e-45  Score=341.17  Aligned_cols=247  Identities=26%  Similarity=0.342  Sum_probs=199.7

Q ss_pred             CCceEEEe-eeeeecceEEEEEEEC--CCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           91 TPRCKILS-KMGEGTFGQVVECFDN--EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        91 ~~~y~~~~-~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .++|.+.+ .||+|+||.||+|.+.  .+++.||||+++..  ....+.+.+|+.+++.++|+||     +++++++. .
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~-~   81 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI-----VRLIGVCQ-A   81 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEE-S
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCE-----eEEEEEec-C
Confidence            46788887 9999999999999864  46788999999763  3456778899999999988777     99999984 4


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.            
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~------------  148 (287)
T 1u59_A           82 EALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHY------------  148 (287)
T ss_dssp             SSEEEEEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTE------------
T ss_pred             CCcEEEEEeCCCCCHHHHHHhCC-ccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCC------------
Confidence            6799999999 889999997543 46999999999999999999999999999999999999987764            


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEAL  317 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~p  317 (438)
                                     ++|+|||++.......      ....||+.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus       149 ---------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p  213 (287)
T 1u59_A          149 ---------------AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP  213 (287)
T ss_dssp             ---------------EEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ---------------EEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence                           5556666554432221      12356889999999998889999999999999999998 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |...+..+....+....                       .                          ...+..+++++.+
T Consensus       214 ~~~~~~~~~~~~i~~~~-----------------------~--------------------------~~~~~~~~~~l~~  244 (287)
T 1u59_A          214 YKKMKGPEVMAFIEQGK-----------------------R--------------------------MECPPECPPELYA  244 (287)
T ss_dssp             TTTCCTHHHHHHHHTTC-----------------------C--------------------------CCCCTTCCHHHHH
T ss_pred             cccCCHHHHHHHHhcCC-----------------------c--------------------------CCCCCCcCHHHHH
Confidence            98877665544432210                       0                          0112345778999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCC
Q 013678          398 LLQGLLRYDPAERLKAREALRHP  420 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~hp  420 (438)
                      ||.+||+.||++|||+.++++|.
T Consensus       245 li~~~l~~~p~~Rps~~~l~~~l  267 (287)
T 1u59_A          245 LMSDCWIYKWEDRPDFLTVEQRM  267 (287)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHHH
Confidence            99999999999999999999863

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=1.2e-44  Score=343.19  Aligned_cols=252  Identities=27%  Similarity=0.393  Sum_probs=192.9

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec----chhhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      +....++|++.+.||+|+||.||+|.+..+++.||||+++.    .....+.+.+|+.+++.++|+|+     +++++++
T Consensus        27 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~  101 (310)
T 2wqm_A           27 GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNV-----IKYYASF  101 (310)
T ss_dssp             TTSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEE
T ss_pred             ccccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEE
Confidence            34455789999999999999999999999999999999874    23445678899999999988777     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                      ...+..++||||+ +++|.+++...  ....+++..+..++.||+.||.|||++||+||||||+||+++.++        
T Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~--------  173 (310)
T 2wqm_A          102 IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG--------  173 (310)
T ss_dssp             EETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--------
T ss_pred             EcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCC--------
Confidence            9999999999999 88999998742  234699999999999999999999999999999999999997655        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~  316 (438)
                                         .++|+|||++......   .....||..|+|||++.+..++.++|||||||++|+|++|..
T Consensus       174 -------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~  234 (310)
T 2wqm_A          174 -------------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS  234 (310)
T ss_dssp             -------------------CEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             -------------------CEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence                               4666777766543322   123478999999999999999999999999999999999999


Q ss_pred             CCCCCCh--HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          317 LFQTHEN--LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       317 pf~~~~~--~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      ||.+...  ......+...  ..+                                              ......++.+
T Consensus       235 p~~~~~~~~~~~~~~~~~~--~~~----------------------------------------------~~~~~~~~~~  266 (310)
T 2wqm_A          235 PFYGDKMNLYSLCKKIEQC--DYP----------------------------------------------PLPSDHYSEE  266 (310)
T ss_dssp             TTC---CCHHHHHHHHHTT--CSC----------------------------------------------CCCTTTSCHH
T ss_pred             CCcccchhHHHHHHHhhcc--cCC----------------------------------------------CCcccccCHH
Confidence            9975432  1111111110  000                                              0001245678


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhc
Q 013678          395 LIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      +.+||.+||+.||++|||+.++++
T Consensus       267 l~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          267 LRQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCChhhCCCHHHHHH
Confidence            999999999999999999999986

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=6.5e-45  Score=348.56  Aligned_cols=254  Identities=20%  Similarity=0.294  Sum_probs=200.3

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCc-----EEEEEEeecch--hhHHHHHHHHHHHHHH-HhcCCCCcceEEecce
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKE-----LVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNW  161 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~  161 (438)
                      ..++|++.+.||+|+||.||+|.+..+++     .||+|++....  ...+.+.+|+.+++.+ .|+||     ++++++
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~~  118 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI-----VNLLGA  118 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCEEEE
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCe-----eeEEEE
Confidence            35789999999999999999999877654     79999997532  3456788999999999 78777     999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe
Q 013678          162 FDYRNHICIVFEKL-GPSLYDFLRKNS------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  228 (438)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~  228 (438)
                      +.+.+.+++||||+ +++|.+++....            ...+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus       119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~  198 (333)
T 2i1m_A          119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT  198 (333)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE
T ss_pred             EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC
Confidence            99999999999999 889999997532            23689999999999999999999999999999999999998


Q ss_pred             cCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHH
Q 013678          229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL  308 (438)
Q Consensus       229 ~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il  308 (438)
                      .++.++|+|||++........                      ........||..|+|||++.+..++.++|||||||++
T Consensus       199 ~~~~~kl~Dfg~~~~~~~~~~----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  256 (333)
T 2i1m_A          199 NGHVAKIGDFGLARDIMNDSN----------------------YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL  256 (333)
T ss_dssp             GGGEEEBCCCGGGCCGGGCTT----------------------SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             CCCeEEECccccccccccccc----------------------eeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHH
Confidence            877655555555432211100                      0001123568889999999999999999999999999


Q ss_pred             HHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhc
Q 013678          309 VELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH  387 (438)
Q Consensus       309 ~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (438)
                      |+|++ |..||.+.........+......                                                ...
T Consensus       257 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~  288 (333)
T 2i1m_A          257 WEIFSLGLNPYPGILVNSKFYKLVKDGYQ------------------------------------------------MAQ  288 (333)
T ss_dssp             HHHTTTSCCSSTTCCSSHHHHHHHHHTCC------------------------------------------------CCC
T ss_pred             HHHHcCCCCCCcccchhHHHHHHHhcCCC------------------------------------------------CCC
Confidence            99998 99999876544433332221100                                                011


Q ss_pred             cCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          388 VDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       388 ~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      +...+..+.+||.+||+.||.+|||+.|+++
T Consensus       289 ~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          289 PAFAPKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            2234678999999999999999999999986

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.9e-45  Score=346.51  Aligned_cols=247  Identities=21%  Similarity=0.305  Sum_probs=193.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      -++|++.+.||+|+||.||+|++..+++.||||++....    ...+.+.+|+.+++.++|+||     +++++++..++
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i-----v~~~~~~~~~~  107 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHV-----VPIHDFGEIDG  107 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEETT
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCe-----eEEEEEEeeCC
Confidence            368999999999999999999999999999999987532    234677889999999988776     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      .+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++              
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~--------------  171 (309)
T 2h34_A          108 QLYVDMRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADD--------------  171 (309)
T ss_dssp             EEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS--------------
T ss_pred             eEEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCC--------------
Confidence            999999999 889999998764  699999999999999999999999999999999999997655              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                   .+||+|||++......    .....||..|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus       172 -------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  238 (309)
T 2h34_A          172 -------------FAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD  238 (309)
T ss_dssp             -------------CEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC
T ss_pred             -------------CEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc
Confidence                         4667777766543322    12347899999999999888999999999999999999999999875


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +.......+..   ..+                                            ........++.++.+||.+
T Consensus       239 ~~~~~~~~~~~---~~~--------------------------------------------~~~~~~~~~~~~l~~li~~  271 (309)
T 2h34_A          239 QLSVMGAHINQ---AIP--------------------------------------------RPSTVRPGIPVAFDAVIAR  271 (309)
T ss_dssp             HHHHHHHHHHS---CCC--------------------------------------------CGGGTSTTCCTHHHHHHHH
T ss_pred             hHHHHHHHhcc---CCC--------------------------------------------CccccCCCCCHHHHHHHHH
Confidence            54322211111   000                                            0011223567789999999


Q ss_pred             ccccCCCCCC-CHHHHhc
Q 013678          402 LLRYDPAERL-KAREALR  418 (438)
Q Consensus       402 ~L~~dP~~Rp-ta~ell~  418 (438)
                      ||+.||++|| |++++++
T Consensus       272 ~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          272 GMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             HTCSSGGGSCSSHHHHHH
T ss_pred             hccCCHHHHHHhHHHHHH
Confidence            9999999999 8888774

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=7.2e-45  Score=345.45  Aligned_cols=250  Identities=22%  Similarity=0.309  Sum_probs=198.1

Q ss_pred             cCCceEEEeeeeeecceEEEEEEE-----CCCCcEEEEEEeecch--hhHHHHHHHHHHHHHH-HhcCCCCcceEEecce
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNW  161 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~  161 (438)
                      ..++|++.+.||+|+||.||+|.+     ..+++.||||+++...  ...+.+.+|+.++..+ +|+||     ++++++
T Consensus        25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i-----v~~~~~   99 (316)
T 2xir_A           25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV-----VNLLGA   99 (316)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCEEEE
T ss_pred             chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCe-----eeEEEE
Confidence            357899999999999999999985     4577899999997533  3446788999999999 55666     999999


Q ss_pred             eccC-CeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 013678          162 FDYR-NHICIVFEKL-GPSLYDFLRKNSY--------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  225 (438)
Q Consensus       162 ~~~~-~~~~lv~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  225 (438)
                      +... ..+++||||+ +++|.+++.....              ..+++..+..++.||+.||.|||++||+||||||+||
T Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Ni  179 (316)
T 2xir_A          100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI  179 (316)
T ss_dssp             ECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             EecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceE
Confidence            8765 4699999999 8999999987542              1288999999999999999999999999999999999


Q ss_pred             EEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchh
Q 013678          226 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCD  300 (438)
Q Consensus       226 li~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D  300 (438)
                      +++.++.                           +||+|||++.......     ....||+.|+|||++.+..++.++|
T Consensus       180 l~~~~~~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  232 (316)
T 2xir_A          180 LLSEKNV---------------------------VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD  232 (316)
T ss_dssp             EECGGGC---------------------------EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             EECCCCC---------------------------EEECCCccccccccCccceeccCCCcceeecCchhhccccccchhH
Confidence            9987664                           5555555554432221     2246788999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhcc
Q 013678          301 LWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR  379 (438)
Q Consensus       301 iwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (438)
                      ||||||++|+|++ |..||.+......+.........                                           
T Consensus       233 i~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~-------------------------------------------  269 (316)
T 2xir_A          233 VWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-------------------------------------------  269 (316)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCC-------------------------------------------
T ss_pred             HHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCcc-------------------------------------------
Confidence            9999999999998 99999876543332221111000                                           


Q ss_pred             chhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       380 ~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                           ......+++++.++|.+||+.||.+|||+.|+++|
T Consensus       270 -----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          270 -----MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 01123456789999999999999999999999976

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=3.6e-45  Score=353.14  Aligned_cols=266  Identities=17%  Similarity=0.144  Sum_probs=197.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCC--------CcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCC----------C
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEK--------KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG----------G  152 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~----------~  152 (438)
                      .++|++.+.||+|+||.||+|++..+        ++.||||++...    +.+.+|+.+++.+.|+|+.          .
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            57999999999999999999999874        889999998754    4578899999999988762          2


Q ss_pred             cceEEecceecc-CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 013678          153 TRCVQIRNWFDY-RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       153 ~~iv~~~~~~~~-~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  231 (438)
                      .+++++++++.. ++..|+||||++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~  196 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPED  196 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTE
T ss_pred             cCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCC
Confidence            344557777765 6799999999999999999876335799999999999999999999999999999999999998776


Q ss_pred             --ccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHH
Q 013678          232 --YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  309 (438)
Q Consensus       232 --~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  309 (438)
                        .++|+|||++.........                 ............||+.|+|||++.+..++.++|||||||++|
T Consensus       197 ~~~~kl~Dfg~a~~~~~~~~~-----------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~  259 (352)
T 2jii_A          197 QSQVTLAGYGFAFRYCPSGKH-----------------VAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCML  259 (352)
T ss_dssp             EEEEEECCGGGCBCSSGGGCC-----------------CCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             CceEEEecCcceeeccCCCcc-----------------ccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence              5555555544322111100                 000001112347999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCC-hHHHHHHH-HHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhc
Q 013678          310 ELCSGEALFQTHE-NLEHLAMM-ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH  387 (438)
Q Consensus       310 elltg~~pf~~~~-~~~~~~~i-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (438)
                      +|++|..||.... ....+... .......+.                                        .. .....
T Consensus       260 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~-~~~~~  298 (352)
T 2jii_A          260 KWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGP----------------------------------------FV-GPCGH  298 (352)
T ss_dssp             HHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCC----------------------------------------EE-CTTSC
T ss_pred             HHHhCCCCcccCCcCHHHHHHHHHhccCChhh----------------------------------------hh-hhccc
Confidence            9999999997653 22222222 111111100                                        00 00001


Q ss_pred             cCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          388 VDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       388 ~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ...++.++.+||.+||+.||++|||++++++
T Consensus       299 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          299 WIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             EECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             cCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence            1245779999999999999999999999875

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=1.1e-44  Score=338.63  Aligned_cols=247  Identities=23%  Similarity=0.328  Sum_probs=197.5

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECC---CCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNE---KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      ..++|++.+.||+|+||.||+|.+..   ++..||+|++...  ....+.+.+|+.+++.++|+|+     +++++++.+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~   84 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI-----VKLIGIIEE   84 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTB-----CCEEEEECS
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCc-----ceEEEEEcC
Confidence            34789999999999999999998654   3456999998753  3455778899999999988877     999998875


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      + ..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.           
T Consensus        85 ~-~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~-----------  151 (281)
T 3cc6_A           85 E-PTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPEC-----------  151 (281)
T ss_dssp             S-SCEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTE-----------
T ss_pred             C-CCEEEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCc-----------
Confidence            4 568999999 899999998654 46999999999999999999999999999999999999987764           


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALF  318 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf  318 (438)
                                      +||+|||++.......    ....+|..|+|||++.+..++.++|||||||++|+|++ |..||
T Consensus       152 ----------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~  215 (281)
T 3cc6_A          152 ----------------VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF  215 (281)
T ss_dssp             ----------------EEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             ----------------EEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCc
Confidence                            5555555554432221    22356788999999999999999999999999999998 99999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      ......+....+.....                                                 ......+++.+.+|
T Consensus       216 ~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~l~~l  246 (281)
T 3cc6_A          216 FWLENKDVIGVLEKGDR-------------------------------------------------LPKPDLCPPVLYTL  246 (281)
T ss_dssp             TTSCGGGHHHHHHHTCC-------------------------------------------------CCCCTTCCHHHHHH
T ss_pred             ccCChHHHHHHHhcCCC-------------------------------------------------CCCCCCCCHHHHHH
Confidence            87665554443322110                                                 01122456789999


Q ss_pred             HHHccccCCCCCCCHHHHhcC
Q 013678          399 LQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~h  419 (438)
                      |.+||+.||++|||+.|++++
T Consensus       247 i~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          247 MTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHccCCchhCcCHHHHHHH
Confidence            999999999999999999864

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.2e-44  Score=342.71  Aligned_cols=244  Identities=26%  Similarity=0.363  Sum_probs=190.4

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      ++|++.+.||+|+||.||+|.+.  ++.||||++... ...+.+.+|+.+++.++|+||     +++++++.+  ..|+|
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~--~~~lv   77 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNI-----VKLYGACLN--PVCLV   77 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTB-----CCEEEBCTT--TTEEE
T ss_pred             hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCc-----CeEEEEEcC--CcEEE
Confidence            68999999999999999999864  788999998653 445778899999999988877     999998874  47999


Q ss_pred             EccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          172 FEKL-GPSLYDFLRKNSY-RSFPIDLVRELGRQLLESVAFMHE---LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      |||+ +++|.+++..... ..++...+..++.||+.||+|||+   +||+||||||+|||++.++.              
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~--------------  143 (307)
T 2eva_A           78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT--------------  143 (307)
T ss_dssp             EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTT--------------
T ss_pred             EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCC--------------
Confidence            9999 9999999986542 247899999999999999999999   89999999999999976542              


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                                  .+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|+.||........
T Consensus       144 ------------~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~  211 (307)
T 2eva_A          144 ------------VLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF  211 (307)
T ss_dssp             ------------EEEECCCCC------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH
T ss_pred             ------------EEEEcccccccccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH
Confidence                        36888888877655555556799999999999999999999999999999999999999975433211


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      ........+..                                               ......++..+.+||.+||+.|
T Consensus       212 ~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~l~~li~~~l~~d  244 (307)
T 2eva_A          212 RIMWAVHNGTR-----------------------------------------------PPLIKNLPKPIESLMTRCWSKD  244 (307)
T ss_dssp             HHHHHHHTTCC-----------------------------------------------CCCBTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHHHhcCCC-----------------------------------------------CCcccccCHHHHHHHHHHhcCC
Confidence            11100000100                                               0112345678999999999999


Q ss_pred             CCCCCCHHHHhc
Q 013678          407 PAERLKAREALR  418 (438)
Q Consensus       407 P~~Rpta~ell~  418 (438)
                      |++|||+.++++
T Consensus       245 p~~Rps~~ell~  256 (307)
T 2eva_A          245 PSQRPSMEEIVK  256 (307)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999987

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-44  Score=345.95  Aligned_cols=248  Identities=21%  Similarity=0.309  Sum_probs=197.8

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCC----cEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKK----ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      ...+|++.+.||+|+||.||+|.+..++    ..||||+++..  ......+.+|+.+++.+.|+||     +++++++.
T Consensus        42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~  116 (333)
T 1mqb_A           42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI-----IRLEGVIS  116 (333)
T ss_dssp             CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEEC
T ss_pred             ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCC-----CcEEEEEe
Confidence            4578999999999999999999876553    45999999753  2345668899999999988777     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      +.+..+|||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++           
T Consensus       117 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~-----------  184 (333)
T 1mqb_A          117 KYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL-----------  184 (333)
T ss_dssp             SSSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-----------
T ss_pred             cCCCcEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCC-----------
Confidence            999999999999 889999998653 4699999999999999999999999999999999999997655           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE  315 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~  315 (438)
                                      .+||+|||++.......      ....+|..|+|||++.+..++.++|||||||++|+|++ |.
T Consensus       185 ----------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  248 (333)
T 1mqb_A          185 ----------------VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE  248 (333)
T ss_dssp             ----------------CEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             ----------------cEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCC
Confidence                            46666777665543221      11245778999999999999999999999999999999 99


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      .||.+.+..+....+.....                                                 ......++..+
T Consensus       249 ~pf~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~l  279 (333)
T 1mqb_A          249 RPYWELSNHEVMKAINDGFR-------------------------------------------------LPTPMDCPSAI  279 (333)
T ss_dssp             CTTTTCCHHHHHHHHHTTCC-------------------------------------------------CCCCTTCBHHH
T ss_pred             CCcccCCHHHHHHHHHCCCc-------------------------------------------------CCCcccCCHHH
Confidence            99988776655444432100                                                 01122456789


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcC
Q 013678          396 IDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      .+||.+||+.||++|||+.+++++
T Consensus       280 ~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          280 YQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999998864

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=3.6e-45  Score=349.53  Aligned_cols=247  Identities=21%  Similarity=0.294  Sum_probs=198.6

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEE--EEEEeecc--hhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccCC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELV--AIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~v--aiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ++|++.+.||+|+||.||+|++..++..+  |+|.++..  ....+.+.+|+.++..+ .|+||     +++++++.+.+
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i-----v~~~~~~~~~~   99 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI-----INLLGACEHRG   99 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTB-----CCEEEEEEETT
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCch-----hhhceeeeeCC
Confidence            68999999999999999999999888765  99988642  23445678899999998 67766     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 013678          167 HICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  231 (438)
                      .+|+||||+ +++|.+++....              ...+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~  179 (327)
T 1fvr_A          100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  179 (327)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCC
Confidence            999999999 899999997642              24699999999999999999999999999999999999997766


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC--CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHH
Q 013678          232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  309 (438)
Q Consensus       232 ~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  309 (438)
                                                 .+||+|||++.....  ......++..|+|||++.+..++.++|||||||++|
T Consensus       180 ---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  232 (327)
T 1fvr_A          180 ---------------------------VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW  232 (327)
T ss_dssp             ---------------------------CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred             ---------------------------eEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHH
Confidence                                       466666666653221  122245688999999999888999999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhcc
Q 013678          310 ELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  388 (438)
Q Consensus       310 ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (438)
                      +|++ |..||.+.+..+....+....                                                 .....
T Consensus       233 ellt~g~~pf~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~  263 (327)
T 1fvr_A          233 EIVSLGGTPYCGMTCAELYEKLPQGY-------------------------------------------------RLEKP  263 (327)
T ss_dssp             HHHTTSCCTTTTCCHHHHHHHGGGTC-------------------------------------------------CCCCC
T ss_pred             HHHcCCCCCCCCCcHHHHHHHhhcCC-------------------------------------------------CCCCC
Confidence            9998 999998876655443321110                                                 00112


Q ss_pred             CCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          389 DHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       389 ~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      ..+++++.+||.+||+.||++|||+.|+++|
T Consensus       264 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          264 LNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            3456789999999999999999999999875

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=1.4e-44  Score=341.22  Aligned_cols=263  Identities=22%  Similarity=0.342  Sum_probs=199.4

Q ss_pred             ccCCceEEEeeeeeecceEEEEEE----ECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      ....+|+++++||+|+||.||+|+    +..+++.||+|++....  ...+.+.+|+.+++.++|+|+     +++++++
T Consensus        18 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~   92 (302)
T 4e5w_A           18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI-----VKYKGIC   92 (302)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTB-----CCEEEEE
T ss_pred             hhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCe-----eeeeeEE
Confidence            345679999999999999999998    67789999999987432  344678899999999988777     9999998


Q ss_pred             ccC--CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          163 DYR--NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       163 ~~~--~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                      ...  +.+++||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.       
T Consensus        93 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~-------  164 (302)
T 4e5w_A           93 TEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ-------  164 (302)
T ss_dssp             EC---CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE-------
T ss_pred             ecCCCceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCC-------
Confidence            876  6799999999 889999996654 46999999999999999999999999999999999999987664       


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  313 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt  313 (438)
                                          ++|+|||++.......      ....||..|+|||++.+..++.++|||||||++|+|++
T Consensus       165 --------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  224 (302)
T 4e5w_A          165 --------------------VKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT  224 (302)
T ss_dssp             --------------------EEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT
T ss_pred             --------------------EEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHH
Confidence                                5666666665443221      22467888999999999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchh
Q 013678          314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  393 (438)
Q Consensus       314 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (438)
                      |..|+...     ...+....++..........   ......                          .........+++
T Consensus       225 g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~--------------------------~~~~~~~~~~~~  270 (302)
T 4e5w_A          225 YCDSDSSP-----MALFLKMIGPTHGQMTVTRL---VNTLKE--------------------------GKRLPCPPNCPD  270 (302)
T ss_dssp             TTCGGGSH-----HHHHHHHHCSCCGGGHHHHH---HHHHHT--------------------------TCCCCCCTTCCH
T ss_pred             ccCCCcch-----hhHHhhccCCcccccCHHHH---HHHHhc--------------------------cCCCCCCCCCCH
Confidence            99987431     11122222222211100000   000000                          001122345678


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhc
Q 013678          394 DLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ++.+||.+||+.||.+|||+.++++
T Consensus       271 ~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          271 EVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            9999999999999999999999985

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=9e-46  Score=353.68  Aligned_cols=259  Identities=25%  Similarity=0.377  Sum_probs=181.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHH-HHHHHHhcCCCCcceEEecceeccCCe
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEID-VLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~-~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++...  .....+..|+. +++.+.|+|     ++++++++.+.+.
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~n-----iv~~~~~~~~~~~   95 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPY-----IVQFYGALFREGD   95 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTT-----BCCEEEEEECSSE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCc-----EeeeeeEEEeCCc
Confidence            478999999999999999999999999999999997532  23344455555 444455555     5999999999999


Q ss_pred             EEEEEccCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEecCcccccCCcccccc
Q 013678          168 ICIVFEKLGPSLYDFLRK---NSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      .++||||+.++|.+++..   .....+++..+..++.|++.||.|||++ ||+||||||+|||++.++            
T Consensus        96 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~------------  163 (327)
T 3aln_A           96 CWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSG------------  163 (327)
T ss_dssp             EEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTT------------
T ss_pred             eEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCC------------
Confidence            999999997799888763   2235799999999999999999999999 999999999999998766            


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHH----hCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVI----LGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~----~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                     .+||+|||++.......  ....||+.|+|||++    .+..++.++|||||||++|+|++|..|
T Consensus       164 ---------------~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p  228 (327)
T 3aln_A          164 ---------------NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP  228 (327)
T ss_dssp             ---------------EEEECCCSSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCC
T ss_pred             ---------------CEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCC
Confidence                           46666666665443221  224789999999998    455689999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.......  ..+.....                    +...                      .........+++.+.+
T Consensus       229 f~~~~~~~--~~~~~~~~--------------------~~~~----------------------~~~~~~~~~~~~~l~~  264 (327)
T 3aln_A          229 YPKWNSVF--DQLTQVVK--------------------GDPP----------------------QLSNSEEREFSPSFIN  264 (327)
T ss_dssp             SSCC---------CCCCC--------------------SCCC----------------------CCCCCSSCCCCHHHHH
T ss_pred             CCCcchHH--HHHHHHhc--------------------CCCC----------------------CCCCcccccCCHHHHH
Confidence            97643211  00000000                    0000                      0001112346778999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          398 LLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      ||.+||+.||++|||+.|+++||||.+.
T Consensus       265 li~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          265 FVNLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence            9999999999999999999999999754

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.1e-45  Score=350.35  Aligned_cols=258  Identities=19%  Similarity=0.262  Sum_probs=190.4

Q ss_pred             ceeeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHH--HhcCCCCcceEEe
Q 013678           81 HYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL--ARHDIGGTRCVQI  158 (438)
Q Consensus        81 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l--~~~~i~~~~iv~~  158 (438)
                      .++...+..+.++|++.+.||+|+||.||+|++.  ++.||||++.....  ....+|.+++..+  .|+|     ++++
T Consensus        26 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~--~~~~~e~~~~~~~~~~h~~-----i~~~   96 (337)
T 3mdy_A           26 GLPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEE--ASWFRETEIYQTVLMRHEN-----ILGF   96 (337)
T ss_dssp             SSCHHHHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGGH--HHHHHHHHHHTSTTCCCTT-----BCCE
T ss_pred             CCCcccccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecccc--chhhhHHHHHHHHhhcCCC-----eeeE
Confidence            3445566778899999999999999999999875  88999999875433  3344455554443  5555     4999


Q ss_pred             cceeccC----CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CceecCCCCCcE
Q 013678          159 RNWFDYR----NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL--------RLIHTDLKPENI  225 (438)
Q Consensus       159 ~~~~~~~----~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~ivHrDlkp~NI  225 (438)
                      ++++...    ..+|+||||+ +++|.+++...   .+++..+..++.||+.||+|||++        ||+||||||+||
T Consensus        97 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Ni  173 (337)
T 3mdy_A           97 IAADIKGTGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNI  173 (337)
T ss_dssp             EEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGE
T ss_pred             EEEEccCCCCCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHE
Confidence            9998876    7899999999 88999999765   599999999999999999999999        999999999999


Q ss_pred             EEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-------cccccCCCcchhHHHhCCCCCcc
Q 013678          226 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-------SYVVSTRHYRAPEVILGLGWNYP  298 (438)
Q Consensus       226 li~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~  298 (438)
                      |++.++                           .+||+|||++.......       ....||+.|+|||++.+...+..
T Consensus       174 ll~~~~---------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  226 (337)
T 3mdy_A          174 LVKKNG---------------------------TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNH  226 (337)
T ss_dssp             EECTTS---------------------------CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTC
T ss_pred             EECCCC---------------------------CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCcc
Confidence            997665                           46666666664432211       23479999999999988766654


Q ss_pred             ------hhHHHHHHHHHHHHhC----------CCCCCCCCh----HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCc
Q 013678          299 ------CDLWSVGCILVELCSG----------EALFQTHEN----LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGAR  358 (438)
Q Consensus       299 ------~DiwSlG~il~elltg----------~~pf~~~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~  358 (438)
                            +|||||||++|||++|          ..||.....    .............                     .
T Consensus       227 ~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------~  285 (337)
T 3mdy_A          227 FQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKL---------------------R  285 (337)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC---------------------C
T ss_pred             ccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhcc---------------------C
Confidence                  9999999999999999          555543211    1111111000000                     0


Q ss_pred             ccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      ..++                     .......+++++.+||.+||+.||++|||+.|+++|
T Consensus       286 ~~~~---------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          286 PSFP---------------------NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             CCCC---------------------GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             cccc---------------------ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            0000                     000112456789999999999999999999999875

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.3e-44  Score=339.90  Aligned_cols=244  Identities=24%  Similarity=0.342  Sum_probs=196.7

Q ss_pred             CCceEEEe-eeeeecceEEEEEE--ECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           91 TPRCKILS-KMGEGTFGQVVECF--DNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        91 ~~~y~~~~-~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      .++|++.+ .||+|+||.||+|.  +..+++.||||+++...   ...+.+.+|+.+++.++|+||     +++++++ .
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~-~   88 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI-----VRMIGIC-E   88 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTB-----CCEEEEE-E
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCE-----EEEEEEE-C
Confidence            36899998 99999999999994  45678899999997532   335678899999999988777     9999988 5


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      .+..++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+||+++.++.           
T Consensus        89 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~-----------  155 (291)
T 1xbb_A           89 AESWMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY-----------  155 (291)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTE-----------
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCc-----------
Confidence            56789999999 899999998764  6999999999999999999999999999999999999987764           


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEA  316 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~  316 (438)
                                      ++|+|||++.......      ....+|..|+|||++.+..++.++|||||||++|+|++ |..
T Consensus       156 ----------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~  219 (291)
T 1xbb_A          156 ----------------AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK  219 (291)
T ss_dssp             ----------------EEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ----------------EEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCC
Confidence                            5566666554433221      11345788999999998889999999999999999999 999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||.+.+..+....+....                       .                          ......+++.+.
T Consensus       220 p~~~~~~~~~~~~~~~~~-----------------------~--------------------------~~~~~~~~~~l~  250 (291)
T 1xbb_A          220 PYRGMKGSEVTAMLEKGE-----------------------R--------------------------MGCPAGCPREMY  250 (291)
T ss_dssp             SSTTCCHHHHHHHHHTTC-----------------------C--------------------------CCCCTTCCHHHH
T ss_pred             CCCCCCHHHHHHHHHcCC-----------------------C--------------------------CCCCCCCCHHHH
Confidence            998877655444332210                       0                          011234577899


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q 013678          397 DLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      +||.+||+.||++|||+.++++
T Consensus       251 ~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          251 DLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999999999875

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=8.2e-45  Score=348.01  Aligned_cols=261  Identities=25%  Similarity=0.325  Sum_probs=179.3

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHH-hcCCCCcceEEeccee------
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWF------  162 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~------  162 (438)
                      ..+|++.+.||+|+||.||+|++..+++.||||++.... ...+.+.+|+.++..+. |+||     +++++++      
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~i-----v~~~~~~~~~~~~  101 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI-----VQFCSAASIGKEE  101 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTB-----CCEEEEEEECTTT
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCCh-----hhccccccccccc
Confidence            468999999999999999999999999999999886433 44567889999999996 7777     8888887      


Q ss_pred             --ccCCeEEEEEccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEecCcccccCC
Q 013678          163 --DYRNHICIVFEKLGPSLYDFLRKN-SYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       163 --~~~~~~~lv~e~~~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                        .....+++||||++|+|.+++... ....+++..++.++.||+.||.|||++|  |+||||||+|||++.++.+||+|
T Consensus       102 ~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~D  181 (337)
T 3ll6_A          102 SDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCD  181 (337)
T ss_dssp             STTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred             cccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEec
Confidence              345579999999988999998752 2346999999999999999999999999  99999999999998777555555


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHH---hCCCCCcchhHHHHHHHHHHHHhC
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI---LGLGWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DiwSlG~il~elltg  314 (438)
                      ||++............            ..............||+.|+|||++   .+..++.++|||||||++|+|++|
T Consensus       182 fg~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g  249 (337)
T 3ll6_A          182 FGSATTISHYPDYSWS------------AQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFR  249 (337)
T ss_dssp             CTTCBCCSSCC-------------------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHS
T ss_pred             CccceeccccCccccc------------ccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhC
Confidence            5544332211100000            0000000111234689999999998   456689999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      ..||...........   ..                         .                        .......+..
T Consensus       250 ~~p~~~~~~~~~~~~---~~-------------------------~------------------------~~~~~~~~~~  277 (337)
T 3ll6_A          250 QHPFEDGAKLRIVNG---KY-------------------------S------------------------IPPHDTQYTV  277 (337)
T ss_dssp             SCCC---------------C-------------------------C------------------------CCTTCCSSGG
T ss_pred             CCCCcchhHHHhhcC---cc-------------------------c------------------------CCcccccchH
Confidence            999965433221110   00                         0                        0111234567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCC
Q 013678          395 LIDLLQGLLRYDPAERLKAREALRHP  420 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~hp  420 (438)
                      +.+||.+||+.||++|||+.|+++|-
T Consensus       278 ~~~li~~~l~~~p~~Rps~~e~l~~l  303 (337)
T 3ll6_A          278 FHSLIRAMLQVNPEERLSIAEVVHQL  303 (337)
T ss_dssp             GHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHH
Confidence            89999999999999999999999873

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=2.5e-45  Score=342.42  Aligned_cols=244  Identities=22%  Similarity=0.316  Sum_probs=191.7

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc-CCeEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-RNHIC  169 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-~~~~~  169 (438)
                      .++|++.+.||+|+||.||+|.+  +++.||||+++.. ...+.+.+|+.+++.++|+|+     +++++++.. .+.++
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~~   91 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNL-----VQLLGVIVEEKGGLY   91 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC-C--HHHHHTHHHHTTCCCTTB-----CCEEEEECCC--CCE
T ss_pred             hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecch-hHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEcCCCceE
Confidence            47899999999999999999986  4889999998754 345678899999999988776     999998654 45799


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      +||||+ +++|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.++                 
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~-----------------  154 (278)
T 1byg_A           92 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN-----------------  154 (278)
T ss_dssp             EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS-----------------
T ss_pred             EEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCC-----------------
Confidence            999999 88999999865433489999999999999999999999999999999999997655                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL  327 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~  327 (438)
                                .++|+|||++...........++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+..
T Consensus       155 ----------~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~  224 (278)
T 1byg_A          155 ----------VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV  224 (278)
T ss_dssp             ----------CEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH
T ss_pred             ----------cEEEeeccccccccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence                      5777888877665554445577889999999999999999999999999999998 99999876554433


Q ss_pred             HHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCC
Q 013678          328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDP  407 (438)
Q Consensus       328 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP  407 (438)
                      ..+....                                                 .......+++.+.+||.+||+.||
T Consensus       225 ~~~~~~~-------------------------------------------------~~~~~~~~~~~l~~li~~~l~~~p  255 (278)
T 1byg_A          225 PRVEKGY-------------------------------------------------KMDAPDGCPPAVYEVMKNCWHLDA  255 (278)
T ss_dssp             HHHTTTC-------------------------------------------------CCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             HHHhcCC-------------------------------------------------CCCCcccCCHHHHHHHHHHhcCCh
Confidence            3221100                                                 001123457789999999999999


Q ss_pred             CCCCCHHHHhc
Q 013678          408 AERLKAREALR  418 (438)
Q Consensus       408 ~~Rpta~ell~  418 (438)
                      ++|||+.|+++
T Consensus       256 ~~Rps~~~l~~  266 (278)
T 1byg_A          256 AMRPSFLQLRE  266 (278)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCCCHHHHHH
Confidence            99999999875

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=1.2e-45  Score=351.93  Aligned_cols=267  Identities=21%  Similarity=0.229  Sum_probs=201.8

Q ss_pred             CCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           87 GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .....++|++.+.||+|+||.||+|.+ .+++.||||++.... ...+.+.+|+.+++.++|+||     +++++++.+.
T Consensus        34 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~  107 (321)
T 2qkw_B           34 LEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHL-----VSLIGFCDER  107 (321)
T ss_dssp             CCCCCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTB-----CCEEEECCCT
T ss_pred             HHHHHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEcCC
Confidence            345668999999999999999999996 468899999986533 345678899999998888776     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      +..++||||+ +++|.+++....  ...+++..+..++.||+.||+|||++||+||||||+|||++.++           
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~-----------  176 (321)
T 2qkw_B          108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENF-----------  176 (321)
T ss_dssp             TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTC-----------
T ss_pred             CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCC-----------
Confidence            9999999999 899999986543  23589999999999999999999999999999999999997655           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                      .+||+|||++......     .....||+.|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       177 ----------------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p  240 (321)
T 2qkw_B          177 ----------------VPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA  240 (321)
T ss_dssp             ----------------CEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTT
T ss_pred             ----------------CEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCc
Confidence                            5667777766543221     1234689999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+....+....+....                .....+......+                 +..........+..+.+
T Consensus       241 ~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~  287 (321)
T 2qkw_B          241 IVQSLPREMVNLAEWAV----------------ESHNNGQLEQIVD-----------------PNLADKIRPESLRKFGD  287 (321)
T ss_dssp             CSCSSSSSCCCHHHHTH----------------HHHTTTCCCSSSS-----------------SSCTTCSCHHHHHHHHH
T ss_pred             ccccCcHHHHHHHHHhh----------------hccccccHHHhcC-----------------hhhccccCHHHHHHHHH
Confidence            97643321110000000                0000000000000                 00001111234568999


Q ss_pred             HHHHccccCCCCCCCHHHHhcC
Q 013678          398 LLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      |+.+||+.||++|||+.|+++|
T Consensus       288 li~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          288 TAVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCCcccCcCHHHHHHH
Confidence            9999999999999999999976

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=7.2e-45  Score=343.03  Aligned_cols=247  Identities=25%  Similarity=0.461  Sum_probs=189.9

Q ss_pred             cCCceEEE-eeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHH-HHhcCCCCcceEEecceecc---
Q 013678           90 LTPRCKIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR-LARHDIGGTRCVQIRNWFDY---  164 (438)
Q Consensus        90 ~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~-l~~~~i~~~~iv~~~~~~~~---  164 (438)
                      +.++|.++ +.||+|+||.||+|.+..+++.||||+++..    ....+|+.++.+ +.|+||     +++++++..   
T Consensus        15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h~~i-----~~~~~~~~~~~~   85 (299)
T 3m2w_A           15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHI-----VRIVDVYENLYA   85 (299)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTB-----CCEEEEEEEEET
T ss_pred             cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccCCCc-----hhHHhhhhhhcC
Confidence            44567776 7899999999999999999999999998653    346678888844 466655     999998876   


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          165 -RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       165 -~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                       ...+++||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++..+           
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-----------  154 (299)
T 3m2w_A           86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR-----------  154 (299)
T ss_dssp             TEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS-----------
T ss_pred             CCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCC-----------
Confidence             67899999999 88999999987656799999999999999999999999999999999999997532           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                   .+..++|+|||++....                   +..++.++|||||||++|+|++|..||.+..
T Consensus       155 -------------~~~~~kl~Dfg~a~~~~-------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~  202 (299)
T 3m2w_A          155 -------------PNAILKLTDFGFAKETT-------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNH  202 (299)
T ss_dssp             -------------TTCCEEECCCTTCEECT-------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--
T ss_pred             -------------CCCcEEEeccccccccc-------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCc
Confidence                         24468999999886432                   2346789999999999999999999997654


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      .......+..                         ......                 ..........+++++.+||.+|
T Consensus       203 ~~~~~~~~~~-------------------------~~~~~~-----------------~~~~~~~~~~~~~~~~~li~~~  240 (299)
T 3m2w_A          203 GLAISPGMKT-------------------------RIRMGQ-----------------YEFPNPEWSEVSEEVKMLIRNL  240 (299)
T ss_dssp             -----CCSCC-------------------------SSCTTC-----------------CSSCHHHHTTSCHHHHHHHHHH
T ss_pred             chhhhHHHHH-------------------------HHhhcc-----------------ccCCchhcccCCHHHHHHHHHH
Confidence            3221100000                         000000                 0000111235678999999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCCCce
Q 013678          403 LRYDPAERLKAREALRHPFFTRDVRRPT  430 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~~~~~~  430 (438)
                      |+.||++|||+.|+|+||||++....+.
T Consensus       241 l~~dP~~Rps~~e~l~hp~~~~~~~~~~  268 (299)
T 3m2w_A          241 LKTEPTQRMTITEFMNHPWIMQSTKVPQ  268 (299)
T ss_dssp             TCSSTTTSCCHHHHHTSHHHHTGGGSCC
T ss_pred             cccChhhCCCHHHHhcChhhcccccCCC
Confidence            9999999999999999999988765443

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.1e-44  Score=368.22  Aligned_cols=252  Identities=27%  Similarity=0.368  Sum_probs=207.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      .++|++.++||+|+||.||+|.+.. +..||||+++......+.+.+|+.+++.++|+||     +++++++.+ +.+||
T Consensus       266 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~-~~~~l  338 (535)
T 2h8h_A          266 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL-----VQLYAVVSE-EPIYI  338 (535)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTB-----CCEEEEECS-SSCEE
T ss_pred             hhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCE-----eeEEEEEee-ccceE
Confidence            3679999999999999999999865 4569999998765566789999999999988877     999998876 67899


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++                  
T Consensus       339 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~------------------  400 (535)
T 2h8h_A          339 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL------------------  400 (535)
T ss_dssp             EECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG------------------
T ss_pred             eeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCC------------------
Confidence            99999 89999999764334699999999999999999999999999999999999997655                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL  324 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~  324 (438)
                               .+||+|||++......    .....++..|+|||++.+..++.++|||||||+||||++ |..||.+....
T Consensus       401 ---------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~  471 (535)
T 2h8h_A          401 ---------VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR  471 (535)
T ss_dssp             ---------CEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH
T ss_pred             ---------cEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence                     5677777777654321    122356788999999999999999999999999999999 99999887776


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +.+..+....                       +                          ......++..+.+||.+||+
T Consensus       472 ~~~~~i~~~~-----------------------~--------------------------~~~~~~~~~~l~~li~~cl~  502 (535)
T 2h8h_A          472 EVLDQVERGY-----------------------R--------------------------MPCPPECPESLHDLMCQCWR  502 (535)
T ss_dssp             HHHHHHHTTC-----------------------C--------------------------CCCCTTCCHHHHHHHHHHTC
T ss_pred             HHHHHHHcCC-----------------------C--------------------------CCCCCCCCHHHHHHHHHHcC
Confidence            6555443211                       0                          01123456789999999999


Q ss_pred             cCCCCCCCHHHHhcC--CCCCCC
Q 013678          405 YDPAERLKAREALRH--PFFTRD  425 (438)
Q Consensus       405 ~dP~~Rpta~ell~h--p~f~~~  425 (438)
                      .||++|||+++|++.  .+|...
T Consensus       503 ~dP~~RPt~~~l~~~L~~~~~~~  525 (535)
T 2h8h_A          503 KEPEERPTFEYLQAFLEDYFTST  525 (535)
T ss_dssp             SSGGGSCCHHHHHHHHHTSSCCC
T ss_pred             CChhHCcCHHHHHHHHHHHhhcc
Confidence            999999999999864  566543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=4.3e-45  Score=350.17  Aligned_cols=278  Identities=21%  Similarity=0.233  Sum_probs=186.1

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEeccee-----ccC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF-----DYR  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~-----~~~  165 (438)
                      .++|++.+.||+|+||.||+|++  +++.||||++............|+..+..+.|+||     +++++.+     ...
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i-----~~~~~~~~~~~~~~~   84 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNI-----ARFIVGDERVTADGR   84 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTB-----CCEEEEEEEECTTSC
T ss_pred             hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcch-----hhheecccccccCCC
Confidence            36899999999999999999975  68899999997544333222333333334556555     8887643     334


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---------CceecCCCCCcEEEecCccccc
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL---------RLIHTDLKPENILLVSAEYVKV  235 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---------~ivHrDlkp~NIli~~~~~~kl  235 (438)
                      ..+|+||||| +++|.+++....   .++..+..++.||+.||+|||++         ||+||||||+|||++.++    
T Consensus        85 ~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~----  157 (336)
T 3g2f_A           85 MEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDG----  157 (336)
T ss_dssp             EEEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTS----
T ss_pred             ceEEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCC----
Confidence            5789999999 999999998764   68999999999999999999999         999999999999997666    


Q ss_pred             CCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----------CcccccCCCcchhHHHhC-------CCCCc
Q 013678          236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----------HSYVVSTRHYRAPEVILG-------LGWNY  297 (438)
Q Consensus       236 ~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----------~~~~~gt~~y~aPE~~~~-------~~~~~  297 (438)
                                             .+||+|||++......           .....||+.|+|||++.+       ..++.
T Consensus       158 -----------------------~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  214 (336)
T 3g2f_A          158 -----------------------TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALK  214 (336)
T ss_dssp             -----------------------CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHH
T ss_pred             -----------------------cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCccccccccccc
Confidence                                   4566666665433211           123479999999999987       34667


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHH
Q 013678          298 PCDLWSVGCILVELCSGEALFQTHEN-LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK  376 (438)
Q Consensus       298 ~~DiwSlG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (438)
                      ++|||||||++|||++|..||..... ......+....+..|.......     .......+..++...           
T Consensus       215 ~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-----------  278 (336)
T 3g2f_A          215 QVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQV-----LVSREKQRPKFPEAW-----------  278 (336)
T ss_dssp             HHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHH-----HHTTSCCCCCCCTTC-----------
T ss_pred             ccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHh-----hhcccccCCCCCccc-----------
Confidence            89999999999999999776643221 1111111111122111100000     000001111111100           


Q ss_pred             hccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHH------hcCCCCCCCCCCce
Q 013678          377 LLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREA------LRHPFFTRDVRRPT  430 (438)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~el------l~hp~f~~~~~~~~  430 (438)
                               ......++++.+||.+||+.||++|||+.|+      +-++|-+++.+.++
T Consensus       279 ---------~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~~~~~~  329 (336)
T 3g2f_A          279 ---------KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVSPT  329 (336)
T ss_dssp             ---------CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-------
T ss_pred             ---------ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcccCCCc
Confidence                     0111245679999999999999999999999      66899988876654

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=1.3e-44  Score=345.55  Aligned_cols=265  Identities=23%  Similarity=0.279  Sum_probs=198.9

Q ss_pred             CCccC-CceEEEeeeeeecceEEEEEE----ECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecc
Q 013678           87 GENLT-PRCKILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (438)
Q Consensus        87 ~~~~~-~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~  160 (438)
                      .+.+. ++|++++.||+|+||.||+|+    +..+++.||||++.... ...+.+.+|+.+++.++|+||     +++++
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~   91 (327)
T 3lxl_A           17 PTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI-----VKYRG   91 (327)
T ss_dssp             CCBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTB-----CCEEE
T ss_pred             hhhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCce-----eEEEE
Confidence            44444 789999999999999999998    57789999999997543 345668899999999988777     99988


Q ss_pred             eec--cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 013678          161 WFD--YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       161 ~~~--~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      ++.  +.+.+|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|
T Consensus        92 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~D  170 (327)
T 3lxl_A           92 VSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIAD  170 (327)
T ss_dssp             EEECSSSCEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECC
T ss_pred             EEecCCCceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcc
Confidence            875  556899999999 999999998643 3599999999999999999999999999999999999998877555544


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHH
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL  311 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  311 (438)
                                                 ||++......      .....||..|+|||++.+..++.++|||||||++|+|
T Consensus       171 ---------------------------fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  223 (327)
T 3lxl_A          171 ---------------------------FGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL  223 (327)
T ss_dssp             ---------------------------GGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred             ---------------------------cccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHH
Confidence                                       4444432221      1223678889999999998899999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCc
Q 013678          312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  391 (438)
Q Consensus       312 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (438)
                      ++|..||.........  ........+.                               ........ ...........+
T Consensus       224 l~g~~p~~~~~~~~~~--~~~~~~~~~~-------------------------------~~~~~~~~-~~~~~~~~~~~~  269 (327)
T 3lxl_A          224 FTYCDKSCSPSAEFLR--MMGCERDVPA-------------------------------LSRLLELL-EEGQRLPAPPAC  269 (327)
T ss_dssp             HTTTCGGGSHHHHHHH--HCC----CCH-------------------------------HHHHHHHH-HTTCCCCCCTTC
T ss_pred             HhCCCCCccccchhhh--hccccccccc-------------------------------HHHHHHHh-hcccCCCCCCcc
Confidence            9999999653221110  0000000000                               00000000 000011223456


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          392 AGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       392 ~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ++++.+||.+||+.||++|||+.|+++
T Consensus       270 ~~~l~~li~~~l~~dP~~Rps~~ell~  296 (327)
T 3lxl_A          270 PAEVHELMKLCWAPSPQDRPSFSALGP  296 (327)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            789999999999999999999999954

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=3.5e-44  Score=338.01  Aligned_cols=246  Identities=15%  Similarity=0.207  Sum_probs=192.6

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCC---CcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEeccee-cc
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF-DY  164 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~-~~  164 (438)
                      ..+|++.+.||+|+||.||+|.+..+   +..||+|.+...  ....+.+.+|+.+++.++|+|+     +++++++ ..
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~   98 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV-----LSLLGICLRS   98 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTB-----CCCCEEECCS
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCE-----eeeeeEEEcC
Confidence            35799999999999999999987544   346899998643  2345678899999999988777     9999984 56


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      ++..++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.           
T Consensus        99 ~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~-----------  166 (298)
T 3f66_A           99 EGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFT-----------  166 (298)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCC-----------
T ss_pred             CCceEEEEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCC-----------
Confidence            67899999999 889999997643 46899999999999999999999999999999999999977664           


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCC-------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE  315 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~  315 (438)
                                      +||+|||++......       .....||+.|+|||++.+..++.++|||||||++|+|++ |.
T Consensus       167 ----------------~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~  230 (298)
T 3f66_A          167 ----------------VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA  230 (298)
T ss_dssp             ----------------EEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             ----------------EEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCC
Confidence                            555555555432211       122467889999999999999999999999999999999 66


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      +||...+..+....+......                                                 ..+..+++.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~l  261 (298)
T 3f66_A          231 PPYPDVNTFDITVYLLQGRRL-------------------------------------------------LQPEYCPDPL  261 (298)
T ss_dssp             CSSTTSCTTTHHHHHHTTCCC-------------------------------------------------CCCTTCCHHH
T ss_pred             CCCccCCHHHHHHHHhcCCCC-------------------------------------------------CCCccCCHHH
Confidence            777665554443333221100                                                 0112346789


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q 013678          396 IDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      .+||.+||+.||++|||+.|+++
T Consensus       262 ~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          262 YEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999886

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.4e-44  Score=335.63  Aligned_cols=245  Identities=19%  Similarity=0.268  Sum_probs=193.5

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCc---EEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      -+|++.++||+|+||.||+|.+..+++   .||+|++....  ...+.+.+|+.+++.++|+||     +++++++.+.+
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~   95 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV-----LALIGIMLPPE   95 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTB-----CCCCEEECCSS
T ss_pred             eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCe-----eeEEEEEecCC
Confidence            357788999999999999999765544   79999987533  345678899999999988777     99999997665


Q ss_pred             eE-EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          167 HI-CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       167 ~~-~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      .. ++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++             
T Consensus        96 ~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~-------------  161 (298)
T 3pls_A           96 GLPHVLLPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESF-------------  161 (298)
T ss_dssp             SCCEEEECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC-------------
T ss_pred             CCcEEEEecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC-------------
Confidence            54 9999999 999999997643 5789999999999999999999999999999999999997655             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCC-------CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCC-C
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-------DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE-A  316 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~-~  316 (438)
                                    .+||+|||++.....       ......+|..|+|||.+.+..++.++|||||||++|+|++|. +
T Consensus       162 --------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~  227 (298)
T 3pls_A          162 --------------TVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP  227 (298)
T ss_dssp             --------------CEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCC
T ss_pred             --------------cEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCC
Confidence                          466666666654322       122346788999999999999999999999999999999955 5


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||...+..+....+.....                                                 ......+++.+.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~l~  258 (298)
T 3pls_A          228 PYRHIDPFDLTHFLAQGRR-------------------------------------------------LPQPEYCPDSLY  258 (298)
T ss_dssp             TTTTSCGGGHHHHHHTTCC-------------------------------------------------CCCCTTCCHHHH
T ss_pred             CCccCCHHHHHHHhhcCCC-------------------------------------------------CCCCccchHHHH
Confidence            5555444433333222110                                                 011234567899


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q 013678          397 DLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      +||.+||+.||.+|||+.++++
T Consensus       259 ~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          259 QVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999999999875

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=8.4e-44  Score=366.76  Aligned_cols=244  Identities=25%  Similarity=0.339  Sum_probs=195.6

Q ss_pred             CCceEEEe-eeeeecceEEEEEEEC--CCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           91 TPRCKILS-KMGEGTFGQVVECFDN--EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        91 ~~~y~~~~-~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .+++.+.+ +||+|+||.||+|.+.  .++..||||+++..  ....+.+.+|+.+++.++|+||     +++++++.. 
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpni-----v~l~~~~~~-  407 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI-----VRLIGVCQA-  407 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTB-----CCEEEEEES-
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCE-----eeEEEEecc-
Confidence            35666666 8999999999999875  35677999999753  2356788999999999988777     999999876 


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.++|||||| +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.            
T Consensus       408 ~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~------------  474 (613)
T 2ozo_A          408 EALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHY------------  474 (613)
T ss_dssp             SSEEEEEECCTTCBHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE------------
T ss_pred             CCeEEEEEeCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCc------------
Confidence            5699999999 999999997543 46999999999999999999999999999999999999987764            


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEAL  317 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~p  317 (438)
                                     +||+|||++.......      ....+|..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       475 ---------------vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~P  539 (613)
T 2ozo_A          475 ---------------AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP  539 (613)
T ss_dssp             ---------------EEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ---------------EEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence                           5556666555432211      11245688999999999999999999999999999998 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+.+..+....+....                       +.                          ..+..+++++.+
T Consensus       540 f~~~~~~~~~~~i~~~~-----------------------~~--------------------------~~p~~~~~~l~~  570 (613)
T 2ozo_A          540 YKKMKGPEVMAFIEQGK-----------------------RM--------------------------ECPPECPPELYA  570 (613)
T ss_dssp             TTTCCSHHHHHHHHTTC-----------------------CC--------------------------CCCTTCCHHHHH
T ss_pred             CCCCCHHHHHHHHHcCC-----------------------CC--------------------------CCCCcCCHHHHH
Confidence            99887766555443211                       00                          112346779999


Q ss_pred             HHHHccccCCCCCCCHHHHh
Q 013678          398 LLQGLLRYDPAERLKAREAL  417 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell  417 (438)
                      ||.+||+.||++|||+.+++
T Consensus       571 li~~cl~~dP~~RPs~~~l~  590 (613)
T 2ozo_A          571 LMSDCWIYKWEDRPDFLTVE  590 (613)
T ss_dssp             HHHHTTCSSTTTSCCHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHH
Confidence            99999999999999999975

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1.7e-44  Score=343.51  Aligned_cols=262  Identities=24%  Similarity=0.361  Sum_probs=196.2

Q ss_pred             CccCCce-EEEeeeeeecceEEEEEE----ECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecc
Q 013678           88 ENLTPRC-KILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (438)
Q Consensus        88 ~~~~~~y-~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~  160 (438)
                      ..+.++| +++++||+|+||.||++.    +..+++.||||+++...  ...+.+.+|+.+++.++|+||     +++++
T Consensus        26 ~~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~  100 (318)
T 3lxp_A           26 TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI-----IKYKG  100 (318)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTB-----CCEEE
T ss_pred             ceecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcch-----hhEEE
Confidence            3466777 999999999999998875    34578999999997543  445678899999999988877     99999


Q ss_pred             eecc--CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 013678          161 WFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       161 ~~~~--~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      ++.+  ...+++||||+ +++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++.     
T Consensus       101 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~-----  172 (318)
T 3lxp_A          101 CCEDAGAASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRL-----  172 (318)
T ss_dssp             EEEETTTTEEEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCC-----
T ss_pred             EEecCCCceEEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCC-----
Confidence            9886  46899999999 89999999765   4999999999999999999999999999999999999976664     


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHH
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL  311 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  311 (438)
                                            +||+|||++.......      ....||..|+|||++.+..++.++|||||||++|+|
T Consensus       173 ----------------------~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  230 (318)
T 3lxp_A          173 ----------------------VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL  230 (318)
T ss_dssp             ----------------------EEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred             ----------------------EEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHH
Confidence                                  5566666555433221      224678889999999998899999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCc
Q 013678          312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  391 (438)
Q Consensus       312 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (438)
                      ++|..||.......  .   ...+........   .........                          .........+
T Consensus       231 l~g~~p~~~~~~~~--~---~~~~~~~~~~~~---~~~~~~~~~--------------------------~~~~~~~~~~  276 (318)
T 3lxp_A          231 LTHCDSSQSPPTKF--L---ELIGIAQGQMTV---LRLTELLER--------------------------GERLPRPDKC  276 (318)
T ss_dssp             HTTTCGGGSHHHHH--H---HHHCSCCHHHHH---HHHHHHHHT--------------------------TCCCCCCTTC
T ss_pred             HhCCCcccccchhh--h---hhhcccccchhH---HHHHHHHhc--------------------------ccCCCCCccc
Confidence            99999996532111  0   000000000000   000000000                          0011223456


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          392 AGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       392 ~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      +.++.+||.+||+.||++|||+.|+++
T Consensus       277 ~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          277 PAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            789999999999999999999999985

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=5.7e-44  Score=338.98  Aligned_cols=248  Identities=15%  Similarity=0.220  Sum_probs=192.1

Q ss_pred             CCceEEEeeeeeecceEEEEEEECC---CCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNE---KKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      .++|++.+.||+|+||.||+|.+..   +++.||+|+++..   ....+.+.+|+.+++.++|+||     +++++++.+
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~  107 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV-----IRLLGVCIE  107 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTB-----CCCCEEEEC
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCe-----eeeeEEEee
Confidence            4789999999999999999998765   5568999998743   2344668899999999988777     999999876


Q ss_pred             CC-----eEEEEEccC-CCCHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 013678          165 RN-----HICIVFEKL-GPSLYDFLRKN----SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  234 (438)
Q Consensus       165 ~~-----~~~lv~e~~-~~~L~~~l~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  234 (438)
                      .+     ..++||||+ +++|.+++...    ....+++..++.++.||+.||.|||++||+||||||+|||++.++   
T Consensus       108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~---  184 (313)
T 3brb_A          108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDM---  184 (313)
T ss_dssp             -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTS---
T ss_pred             ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC---
Confidence            54     469999999 89999999542    235699999999999999999999999999999999999997655   


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHH
Q 013678          235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  309 (438)
Q Consensus       235 l~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  309 (438)
                                              .+||+|||++......     .....+++.|+|||++.+..++.++|||||||++|
T Consensus       185 ------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  240 (313)
T 3brb_A          185 ------------------------TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMW  240 (313)
T ss_dssp             ------------------------CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHH
T ss_pred             ------------------------cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHH
Confidence                                    4666666666543322     12245688999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhcc
Q 013678          310 ELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  388 (438)
Q Consensus       310 ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (438)
                      +|++ |..||.+.........+....                                                 .....
T Consensus       241 el~~~g~~p~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~  271 (313)
T 3brb_A          241 EIATRGMTPYPGVQNHEMYDYLLHGH-------------------------------------------------RLKQP  271 (313)
T ss_dssp             HHHTTSCCSSTTCCGGGHHHHHHTTC-------------------------------------------------CCCCB
T ss_pred             HHHhcCCCCCccCCHHHHHHHHHcCC-------------------------------------------------CCCCC
Confidence            9999 999998776654443332210                                                 00112


Q ss_pred             CCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          389 DHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       389 ~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      ..+++++.+||.+||+.||++|||+.+++++
T Consensus       272 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          272 EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            3456789999999999999999999999864

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=1.2e-45  Score=377.07  Aligned_cols=280  Identities=24%  Similarity=0.306  Sum_probs=206.1

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc---
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY---  164 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~---  164 (438)
                      ..++|++.++||+|+||.||+|.+..+|+.||||+++..  ....+.+.+|+.+++.++|+||     +++++++..   
T Consensus        12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnI-----V~l~~v~~~~~~   86 (676)
T 3qa8_A           12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV-----VSAREVPDGLQK   86 (676)
T ss_dssp             -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTB-----CCEEECCTTTCC
T ss_pred             CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCC-----Cceeeeeccccc
Confidence            347899999999999999999999999999999998643  3445678899999999998887     888888765   


Q ss_pred             ---CCeEEEEEccC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          165 ---RNHICIVFEKL-GPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       165 ---~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                         ++..|+||||| +++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+||+++.++        
T Consensus        87 ~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g--------  158 (676)
T 3qa8_A           87 LAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGP--------  158 (676)
T ss_dssp             CCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCS--------
T ss_pred             ccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCC--------
Confidence               67889999999 999999998643 23589999999999999999999999999999999999998654        


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                      ....++|+|||.+.......  ....||..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       159 ----------------~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~P  222 (676)
T 3qa8_A          159 ----------------QRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP  222 (676)
T ss_dssp             ----------------SSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSS
T ss_pred             ----------------CceeEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCC
Confidence                            23347899999887654432  345899999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+.........      ......    ...............+....                .........+++.+.+
T Consensus       223 f~~~~~~~~~~~------~i~~~~----~~~~~~~~~l~g~~~~~~~l----------------p~p~~l~~~ls~~L~d  276 (676)
T 3qa8_A          223 FLPNWQPVQWHG------KVREKS----NEHIVVYDDLTGAVKFSSVL----------------PTPNHLSGILAGKLER  276 (676)
T ss_dssp             CCSSCHHHHSST------TCC----------CCSCCCCSSSCCCCSSS----------------CCSCCCCGGGHHHHHH
T ss_pred             CCcccchhhhhh------hhhccc----chhhhhhhhhcccccccccc----------------CCchhhchhhhHHHHH
Confidence            976543221100      000000    00000000000001111000                0001122345788999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          398 LLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      ||.+||.+||++|||+.|+++||||+.
T Consensus       277 LI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          277 WLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             HHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             HHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence            999999999999999999999999864

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=2.1e-45  Score=350.87  Aligned_cols=270  Identities=19%  Similarity=0.228  Sum_probs=202.0

Q ss_pred             eeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCcceEEecc
Q 013678           83 VFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (438)
Q Consensus        83 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~  160 (438)
                      .+.......++|++.+.||+|+||.||+|.+ .+++.||||++.....  ....+.+|+.+++.+.|+||     +++++
T Consensus        21 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~   94 (326)
T 3uim_A           21 SLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL-----LRLRG   94 (326)
T ss_dssp             CTHHHHTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTB-----CCCCE
T ss_pred             cHHHHHHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCc-----cceEE
Confidence            3344456678999999999999999999985 4688999999875322  22357889999998888776     99999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCCCCcEEEecCcccc
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHEL---RLIHTDLKPENILLVSAEYVK  234 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIli~~~~~~k  234 (438)
                      ++.+.+..++||||+ +++|.+++....  ...+++..+..++.||+.||+|||++   ||+||||||+|||++.++   
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~---  171 (326)
T 3uim_A           95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF---  171 (326)
T ss_dssp             EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTC---
T ss_pred             EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCC---
Confidence            999999999999999 899999998653  23499999999999999999999999   999999999999997655   


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHH
Q 013678          235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE  310 (438)
Q Consensus       235 l~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e  310 (438)
                                              .+||+|||++.......    ....||+.|+|||++.+..++.++|||||||++|+
T Consensus       172 ------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~  227 (326)
T 3uim_A          172 ------------------------EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLE  227 (326)
T ss_dssp             ------------------------CEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHH
T ss_pred             ------------------------CEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHH
Confidence                                    56777777776543222    22468999999999999889999999999999999


Q ss_pred             HHhCCCCCCCCC-----hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhh
Q 013678          311 LCSGEALFQTHE-----NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  385 (438)
Q Consensus       311 lltg~~pf~~~~-----~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (438)
                      |++|..||....     .......+..                   ............                 .....
T Consensus       228 l~~g~~pf~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~-----------------~~~~~  271 (326)
T 3uim_A          228 LITGQRAFDLARLANDDDVMLLDWVKG-------------------LLKEKKLEALVD-----------------VDLQG  271 (326)
T ss_dssp             HHHCCCSBCHHHHTTTSCSBHHHHHTT-------------------TTSSCCSTTSSC-----------------TTCTT
T ss_pred             HHhCCCcccccccccccchhHHHHHHH-------------------HhhchhhhhhcC-----------------hhhcc
Confidence            999999995210     0000000000                   000000000000                 00001


Q ss_pred             hccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCC
Q 013678          386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF  421 (438)
Q Consensus       386 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~  421 (438)
                      ......+..+.+|+.+||+.||++|||+.|+++|-.
T Consensus       272 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          272 NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence            112234568999999999999999999999998754

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=8.4e-45  Score=357.73  Aligned_cols=251  Identities=18%  Similarity=0.188  Sum_probs=190.2

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcC-----------CCCcceE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHD-----------IGGTRCV  156 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~-----------i~~~~iv  156 (438)
                      ..|++.+.||+|+||.||+|++..+|+.||||+++...    ...+.+.+|+.++..+.|..           +....++
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            45889999999999999999999999999999987322    23467888999998887621           1111112


Q ss_pred             Ee------cceecc-----CCeEEEEEccCCCCHHHHHHh-----cCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Q 013678          157 QI------RNWFDY-----RNHICIVFEKLGPSLYDFLRK-----NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL  220 (438)
Q Consensus       157 ~~------~~~~~~-----~~~~~lv~e~~~~~L~~~l~~-----~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  220 (438)
                      .+      ..++..     ...++++|++++++|.+++..     .....+++..+..++.||+.||+|||++||+||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDi  237 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL  237 (413)
T ss_dssp             ECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence            21      111121     235789999999999999852     22345788899999999999999999999999999


Q ss_pred             CCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHH----------
Q 013678          221 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVI----------  290 (438)
Q Consensus       221 kp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~----------  290 (438)
                      ||+||||+.++                           .+||+|||++..........+| +.|+|||++          
T Consensus       238 Kp~NILl~~~~---------------------------~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~  289 (413)
T 3dzo_A          238 RPVDIVLDQRG---------------------------GVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQH  289 (413)
T ss_dssp             CGGGEEECTTC---------------------------CEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGG
T ss_pred             ccceEEEecCC---------------------------eEEEEeccceeecCCccccCCC-CceeCchhhhccccccccc
Confidence            99999997766                           4677777776655544445678 999999999          


Q ss_pred             hCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhh
Q 013678          291 LGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS  370 (438)
Q Consensus       291 ~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (438)
                      .+..++.++|||||||++|+|++|+.||...+.....                                           
T Consensus       290 ~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~-------------------------------------------  326 (413)
T 3dzo_A          290 HPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGS-------------------------------------------  326 (413)
T ss_dssp             CCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCS-------------------------------------------
T ss_pred             cCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhH-------------------------------------------
Confidence            4445889999999999999999999999764321100                                           


Q ss_pred             HHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          371 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                                 .........+++++.+||.+||+.||++|||+.++++||||++
T Consensus       327 -----------~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~  369 (413)
T 3dzo_A          327 -----------EWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  369 (413)
T ss_dssp             -----------GGGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             -----------HHHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence                       0011112345678999999999999999999999999999965

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-44  Score=349.69  Aligned_cols=246  Identities=16%  Similarity=0.218  Sum_probs=189.0

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCC---cEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec-cC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKK---ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD-YR  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~-~~  165 (438)
                      .+|++.+.||+|+||.||+|.+..++   ..||+|.++..  ....+.+.+|+.+++.++|+||     +++++++. .+
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~~~~~~~~~~  163 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV-----LSLLGICLRSE  163 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTB-----CCCCEEECCCS
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEEcCC
Confidence            46899999999999999999875433   46899998643  2345778899999999988777     99999854 55


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +..++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++             
T Consensus       164 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-------------  229 (373)
T 3c1x_A          164 GSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF-------------  229 (373)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-------------
T ss_pred             CCeEEEEECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCC-------------
Confidence            6889999999 899999997644 4689999999999999999999999999999999999997665             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC-------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEA  316 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~  316 (438)
                                    .+||+|||++......       .....+|..|+|||++.+..++.++|||||||++|||++ |.+
T Consensus       230 --------------~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~  295 (373)
T 3c1x_A          230 --------------TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP  295 (373)
T ss_dssp             --------------CEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             --------------CEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCC
Confidence                          4566666665533211       122356788999999999999999999999999999999 788


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||...+..+....+....                       .                          ...+..++..+.
T Consensus       296 p~~~~~~~~~~~~~~~~~-----------------------~--------------------------~~~p~~~~~~l~  326 (373)
T 3c1x_A          296 PYPDVNTFDITVYLLQGR-----------------------R--------------------------LLQPEYCPDPLY  326 (373)
T ss_dssp             SCTTSCSSCHHHHHHTTC-----------------------C--------------------------CCCCTTCCHHHH
T ss_pred             CCCCCCHHHHHHHHHcCC-----------------------C--------------------------CCCCCCCCHHHH
Confidence            887655443333222110                       0                          011234567899


Q ss_pred             HHHHHccccCCCCCCCHHHHhcC
Q 013678          397 DLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      +||.+||+.||++|||+.|++++
T Consensus       327 ~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          327 EVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999998864

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=4.8e-44  Score=335.76  Aligned_cols=246  Identities=20%  Similarity=0.294  Sum_probs=191.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECC-CC--cEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNE-KK--ELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~--~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      .++|++.+.||+|+||.||+|++.. ++  ..||||+++..    ....+.+.+|+.+++.++|+|+     +++++++.
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~   91 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL-----IRLYGVVL   91 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEC
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCc-----ccEEEEEc
Confidence            4789999999999999999998643 33  36899998643    2345678899999999988777     99999988


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      ... .++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.          
T Consensus        92 ~~~-~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~----------  159 (291)
T 1u46_A           92 TPP-MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL----------  159 (291)
T ss_dssp             SSS-CEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTE----------
T ss_pred             cCC-ceeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCC----------
Confidence            765 88999999 899999998653 36999999999999999999999999999999999999987764          


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE  315 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~  315 (438)
                                       +||+|||++.......      ....+|..|+|||++.+..++.++|||||||++|+|++ |.
T Consensus       160 -----------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~  222 (291)
T 1u46_A          160 -----------------VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ  222 (291)
T ss_dssp             -----------------EEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred             -----------------EEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence                             5666666555433221      12356788999999998889999999999999999999 99


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      .||.+.+..+....+......+                                                .....++.++
T Consensus       223 ~p~~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~l  254 (291)
T 1u46_A          223 EPWIGLNGSQILHKIDKEGERL------------------------------------------------PRPEDCPQDI  254 (291)
T ss_dssp             CTTTTCCHHHHHHHHHTSCCCC------------------------------------------------CCCTTCCHHH
T ss_pred             CCcccCCHHHHHHHHHccCCCC------------------------------------------------CCCcCcCHHH
Confidence            9998877666554443211100                                                1123456789


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q 013678          396 IDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      .++|.+||+.||++|||+.++++
T Consensus       255 ~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          255 YNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHccCCcccCcCHHHHHH
Confidence            99999999999999999999987

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=3.6e-44  Score=340.98  Aligned_cols=248  Identities=21%  Similarity=0.285  Sum_probs=194.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec----cC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD----YR  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~----~~  165 (438)
                      .++|++.+.||+|+||.||+|++..+++.||||++... ....+.+.+|+.+++.++|+||     +++++++.    ..
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~  102 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNI-----LRLVAYCLRERGAK  102 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTB-----CCCCEEEEEEETTE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCe-----eeEEEEEEeccCCC
Confidence            47899999999999999999999999999999988643 3456778899999999988777     99999886    34


Q ss_pred             CeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          166 NHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      ...++||||+ +++|.+++...  ....+++..++.++.||+.||.|||++||+||||||+|||++.++           
T Consensus       103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~-----------  171 (317)
T 2buj_A          103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEG-----------  171 (317)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTS-----------
T ss_pred             ceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC-----------
Confidence            5899999999 88999999762  235799999999999999999999999999999999999997655           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCCC------------cccccCCCcchhHHHhCCC---CCcchhHHHHHHH
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------------SYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCI  307 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------------~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~i  307 (438)
                                      .++|+|||++.......            ....||+.|+|||++.+..   ++.++|||||||+
T Consensus       172 ----------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~i  235 (317)
T 2buj_A          172 ----------------QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCV  235 (317)
T ss_dssp             ----------------CEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHH
T ss_pred             ----------------CEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHH
Confidence                            46777777665432110            1235799999999987654   6899999999999


Q ss_pred             HHHHHhCCCCCCCCChH--HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhh
Q 013678          308 LVELCSGEALFQTHENL--EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  385 (438)
Q Consensus       308 l~elltg~~pf~~~~~~--~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (438)
                      +|+|++|..||......  .....+..                                                 ....
T Consensus       236 l~el~~g~~p~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~  266 (317)
T 2buj_A          236 LYAMMFGEGPYDMVFQKGDSVALAVQN-------------------------------------------------QLSI  266 (317)
T ss_dssp             HHHHHHSSCTTHHHHHTTSCHHHHHHC-------------------------------------------------C--C
T ss_pred             HHHHHhCCCChhhhhcccchhhHHhhc-------------------------------------------------cCCC
Confidence            99999999999421000  00000000                                                 0001


Q ss_pred             hccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       386 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      .....++.++.+||.+||+.||.+|||+.+++++
T Consensus       267 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          267 PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            1123457789999999999999999999999986

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=5.3e-44  Score=346.69  Aligned_cols=211  Identities=20%  Similarity=0.260  Sum_probs=169.8

Q ss_pred             cCCceEEEeeeeeecceEEEEE-----EECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           90 LTPRCKILSKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~-----~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      ..++|++.++||+|+||.||+|     .+..+++.||||+++..  ....+.+|+.++..+.+.  .|++++.+++++..
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~--~~~~iv~~~~~~~~  138 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPS--MQHMFMKFYSAHLF  138 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGG--GGGGBCCEEEEEEC
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhh--hhhhhhhhheeeec
Confidence            3578999999999999999999     46778999999999753  345678888888888732  24566999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKN---SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                      .+..||||||| +++|.+++...   ....+++..++.++.||+.||+|||++||+||||||+|||++.+....      
T Consensus       139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~------  212 (365)
T 3e7e_A          139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQ------  212 (365)
T ss_dssp             SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------
T ss_pred             CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCc------
Confidence            99999999999 99999999752   235799999999999999999999999999999999999997621000      


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCC-----CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCC
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~  315 (438)
                                .........+||+|||+|.....     .....+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus       213 ----------~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  282 (365)
T 3e7e_A          213 ----------DDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGT  282 (365)
T ss_dssp             ----------------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSS
T ss_pred             ----------cccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCC
Confidence                      00011245789999999865321     123357999999999999999999999999999999999999


Q ss_pred             CCCCC
Q 013678          316 ALFQT  320 (438)
Q Consensus       316 ~pf~~  320 (438)
                      .||..
T Consensus       283 ~pf~~  287 (365)
T 3e7e_A          283 YMKVK  287 (365)
T ss_dssp             CCCEE
T ss_pred             Ccccc
Confidence            99954

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1.7e-43  Score=365.45  Aligned_cols=241  Identities=24%  Similarity=0.356  Sum_probs=193.3

Q ss_pred             eEEE-eeeeeecceEEEEEEE--CCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           94 CKIL-SKMGEGTFGQVVECFD--NEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        94 y~~~-~~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      +.+. ++||+|+||.||+|.+  ..+++.||||+++...   ...+.+.+|+.+++.++|+||     +++++++.. +.
T Consensus       370 ~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~l~~~~~~-~~  443 (635)
T 4fl3_A          370 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI-----VRMIGICEA-ES  443 (635)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTB-----CCEEEEEES-SS
T ss_pred             ccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEec-CC
Confidence            4443 4799999999999954  5667899999997532   335778999999999988877     999999875 45


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      .+|||||| +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+||||+.++.+             
T Consensus       444 ~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~-------------  508 (635)
T 4fl3_A          444 WMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA-------------  508 (635)
T ss_dssp             EEEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEE-------------
T ss_pred             EEEEEEccCCCCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCE-------------
Confidence            89999999 999999998754  79999999999999999999999999999999999999887754             


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQ  319 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~  319 (438)
                                    ||+|||++......      .....+|..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus       509 --------------kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~  574 (635)
T 4fl3_A          509 --------------KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR  574 (635)
T ss_dssp             --------------EECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred             --------------EEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                          55555555433221      112356788999999999999999999999999999998 999999


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      +.+..+....+....                       ..                          ..+..+++++.+||
T Consensus       575 ~~~~~~~~~~i~~~~-----------------------~~--------------------------~~p~~~~~~l~~li  605 (635)
T 4fl3_A          575 GMKGSEVTAMLEKGE-----------------------RM--------------------------GCPAGCPREMYDLM  605 (635)
T ss_dssp             TCCHHHHHHHHHTTC-----------------------CC--------------------------CCCTTCCHHHHHHH
T ss_pred             CCCHHHHHHHHHcCC-----------------------CC--------------------------CCCCCCCHHHHHHH
Confidence            887776655543321                       00                          11234577899999


Q ss_pred             HHccccCCCCCCCHHHHhc
Q 013678          400 QGLLRYDPAERLKAREALR  418 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~  418 (438)
                      .+||+.||++|||+.+|++
T Consensus       606 ~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          606 NLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             HHHTCSSTTTSCCHHHHHH
T ss_pred             HHHcCCCHhHCcCHHHHHH
Confidence            9999999999999999875

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=1.1e-43  Score=341.15  Aligned_cols=258  Identities=20%  Similarity=0.254  Sum_probs=196.6

Q ss_pred             ceeeecCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHH--HHhcCCCCcceEEe
Q 013678           81 HYVFAIGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR--LARHDIGGTRCVQI  158 (438)
Q Consensus        81 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~--l~~~~i~~~~iv~~  158 (438)
                      .+++..++.+.++|++.+.||+|+||.||+|.+  +++.||||++...  ....+.+|++++..  +.|+||     +++
T Consensus        31 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni-----~~~  101 (342)
T 1b6c_B           31 GLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENI-----LGF  101 (342)
T ss_dssp             SSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTB-----CCE
T ss_pred             CCceeecccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcE-----EEE
Confidence            455666778889999999999999999999987  5889999999753  34567788888887  566655     999


Q ss_pred             cceeccCC----eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCceecCCCCCcE
Q 013678          159 RNWFDYRN----HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH--------ELRLIHTDLKPENI  225 (438)
Q Consensus       159 ~~~~~~~~----~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH--------~~~ivHrDlkp~NI  225 (438)
                      ++++....    .+|+||||+ +++|.+++...   .+++..++.++.||+.||.|||        ++||+||||||+||
T Consensus       102 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NI  178 (342)
T 1b6c_B          102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNI  178 (342)
T ss_dssp             EEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGE
T ss_pred             EeeecccCCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHE
Confidence            99988765    899999999 88999999875   5999999999999999999999        89999999999999


Q ss_pred             EEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-------cccccCCCcchhHHHhCCC----
Q 013678          226 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-------SYVVSTRHYRAPEVILGLG----  294 (438)
Q Consensus       226 li~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~----  294 (438)
                      |++.++                           .+||+|||++.......       ....||+.|+|||++.+..    
T Consensus       179 ll~~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  231 (342)
T 1b6c_B          179 LVKKNG---------------------------TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH  231 (342)
T ss_dssp             EECTTS---------------------------CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTC
T ss_pred             EECCCC---------------------------CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccc
Confidence            997655                           46677777665433322       2347899999999998763    


Q ss_pred             --CCcchhHHHHHHHHHHHHhC----------CCCCCCCCh----HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCc
Q 013678          295 --WNYPCDLWSVGCILVELCSG----------EALFQTHEN----LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGAR  358 (438)
Q Consensus       295 --~~~~~DiwSlG~il~elltg----------~~pf~~~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~  358 (438)
                        ++.++|||||||++|+|++|          ..||.....    ...+...... ...                    +
T Consensus       232 ~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~--------------------~  290 (342)
T 1b6c_B          232 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE-QKL--------------------R  290 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT-SCC--------------------C
T ss_pred             cccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHH-HHh--------------------C
Confidence              33789999999999999999          778865321    1111111000 000                    0


Q ss_pred             ccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          359 LDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      ...+.                     .......+..+.+||.+||+.||++|||+.|+++|
T Consensus       291 ~~~~~---------------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          291 PNIPN---------------------RWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             CCCCG---------------------GGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             CCCcc---------------------cccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            00000                     00012335678999999999999999999999875

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.7e-43  Score=336.40  Aligned_cols=263  Identities=22%  Similarity=0.307  Sum_probs=197.0

Q ss_pred             cCCceEEEeeeeeecceEEEEEE----ECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           90 LTPRCKILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      ..++|++++.||+|+||.||+|+    +..+++.||||++.... ...+.+.+|+.+++.++|+||     +++++++..
T Consensus        39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~  113 (326)
T 2w1i_A           39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI-----VKYKGVCYS  113 (326)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTB-----CCEEEEECC
T ss_pred             CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCe-----eeEEEEEEe
Confidence            34679999999999999999998    46789999999997533 445678899999999988777     999998765


Q ss_pred             CC--eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          165 RN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       165 ~~--~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                      .+  .+++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.         
T Consensus       114 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~---------  183 (326)
T 2w1i_A          114 AGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR---------  183 (326)
T ss_dssp             ----CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTE---------
T ss_pred             cCCCceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCc---------
Confidence            43  789999999 899999998764 46999999999999999999999999999999999999987664         


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~  315 (438)
                                        +||+|||++.......      ....++..|+|||++.+..++.++|||||||++|+|++|.
T Consensus       184 ------------------~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~  245 (326)
T 2w1i_A          184 ------------------VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI  245 (326)
T ss_dssp             ------------------EEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTT
T ss_pred             ------------------EEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcC
Confidence                              5666666655433221      1235677899999999988999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      .||....  .   .+.+..+..+......  ..........                          ........++.++
T Consensus       246 ~~~~~~~--~---~~~~~~~~~~~~~~~~--~~~~~~~~~~--------------------------~~~~~~~~~~~~l  292 (326)
T 2w1i_A          246 EKSKSPP--A---EFMRMIGNDKQGQMIV--FHLIELLKNN--------------------------GRLPRPDGCPDEI  292 (326)
T ss_dssp             CGGGSHH--H---HHHHHHCTTCCTHHHH--HHHHHHHHTT--------------------------CCCCCCTTCCHHH
T ss_pred             CCCCCCH--H---HHHHhhccccchhhhH--HHHHHHhhcC--------------------------CCCCCCCcccHHH
Confidence            9985421  1   1111111111000000  0000000000                          0011234567899


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q 013678          396 IDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      .+||.+||+.||++|||+.|+++
T Consensus       293 ~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          293 YMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999985

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=4.6e-45  Score=350.14  Aligned_cols=270  Identities=20%  Similarity=0.266  Sum_probs=198.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---------hhHHHHHHHHHHHHHHH---------hcCCC-
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLA---------RHDIG-  151 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~---------~~~i~-  151 (438)
                      .++|++.++||+|+||.||+|++  +|+.||||++....         ...+.+.+|+.+++.++         |+|+. 
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            36899999999999999999997  68999999997532         22377889999999997         66653 


Q ss_pred             -----------CcceEEecceecc-------------CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Q 013678          152 -----------GTRCVQIRNWFDY-------------RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES  206 (438)
Q Consensus       152 -----------~~~iv~~~~~~~~-------------~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~a  206 (438)
                                 |+|+++++++|.+             .+.+||||||| +|++.+.+.+   ..+++..++.++.||+.|
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~a  173 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTAS  173 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHH
Confidence                       6777888888876             78999999999 8866666643   368999999999999999


Q ss_pred             HHHHH-hCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcc
Q 013678          207 VAFMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYR  285 (438)
Q Consensus       207 L~~LH-~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~  285 (438)
                      |+||| ++||+||||||+|||++.++... .++++.....      ........+||+|||+|+.....  ..+||+.|+
T Consensus       174 L~~lH~~~~ivHrDlKp~NILl~~~~~~~-~~~~~~~~~~------~~~~~~~~vkL~DFG~a~~~~~~--~~~gt~~y~  244 (336)
T 2vuw_A          174 LAVAEASLRFEHRDLHWGNVLLKKTSLKK-LHYTLNGKSS------TIPSCGLQVSIIDYTLSRLERDG--IVVFCDVSM  244 (336)
T ss_dssp             HHHHHHHHCCBCSCCCGGGEEEEECSCSE-EEEEETTEEE------EEECTTEEEEECCCTTCBEEETT--EEECCCCTT
T ss_pred             HHHHHHhCCEeECCCCHHHEEEeccCCcc-eeeeccCccc------cccCCCceEEEeeccccEecCCC--cEEEeeccc
Confidence            99999 99999999999999998875211 1111110000      00012337899999999876543  458999999


Q ss_pred             hhHHHhCCCCCcchhHHHHHHH-HHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCC
Q 013678          286 APEVILGLGWNYPCDLWSVGCI-LVELCSGEALFQTHENLE-HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPD  363 (438)
Q Consensus       286 aPE~~~~~~~~~~~DiwSlG~i-l~elltg~~pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  363 (438)
                      |||++.+.. +.++||||||++ .+++++|..||....... ....+....                         .+..
T Consensus       245 aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------~~~~  298 (336)
T 2vuw_A          245 DEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQM-------------------------TFKT  298 (336)
T ss_dssp             CSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTC-------------------------CCSS
T ss_pred             ChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhh-------------------------ccCc
Confidence            999998776 899999998777 778889999984311101 111111000                         0000


Q ss_pred             CCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHh-cCCCCC
Q 013678          364 GATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREAL-RHPFFT  423 (438)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell-~hp~f~  423 (438)
                      .                  ........+++++.+||++||++|     ||+|+| +||||+
T Consensus       299 ~------------------~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          299 K------------------CNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             C------------------CCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             c------------------cchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            0                  000111235778999999999987     999999 999996

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1.9e-43  Score=334.42  Aligned_cols=256  Identities=23%  Similarity=0.343  Sum_probs=194.0

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc-----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      |...++||+|+||.||+|.+  +++.||||++...     ....+.+.+|+.+++.++|+||     +++++++.+.+..
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~  105 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL-----VELLGFSSDGDDL  105 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTB-----CCEEEEECSSSSC
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCe-----EEEEEEEecCCce
Confidence            34458899999999999985  5788999998642     2345778899999999988877     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      ++||||+ +++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++.++               
T Consensus       106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~---------------  170 (307)
T 2nru_A          106 CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAF---------------  170 (307)
T ss_dssp             EEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC---------------
T ss_pred             EEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCC---------------
Confidence            9999999 999999997432 34699999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                  .++|+|||++.......     ....||+.|+|||++.+ .++.++|||||||++|+|++|..||...
T Consensus       171 ------------~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~  237 (307)
T 2nru_A          171 ------------TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEH  237 (307)
T ss_dssp             ------------CEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTT
T ss_pred             ------------cEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccC
Confidence                        56677777665433221     22478999999998865 4789999999999999999999999765


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      .....+..+.+........+        ..+..                           ..........+..+.+||.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~--------~~~~~---------------------------~~~~~~~~~~~~~l~~li~~  282 (307)
T 2nru_A          238 REPQLLLDIKEEIEDEEKTI--------EDYID---------------------------KKMNDADSTSVEAMYSVASQ  282 (307)
T ss_dssp             BSSSBTTHHHHHHHTTSCCH--------HHHSC---------------------------SSCSCCCHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHhhhhhhhh--------hhhcc---------------------------ccccccchHHHHHHHHHHHH
Confidence            44332222221110000000        00000                           00000112235678999999


Q ss_pred             ccccCCCCCCCHHHHhcC
Q 013678          402 LLRYDPAERLKAREALRH  419 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~h  419 (438)
                      ||+.||.+|||+.+++++
T Consensus       283 cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          283 CLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HTCSSTTTSCCHHHHHHH
T ss_pred             HcCCCcccCcCHHHHHHH
Confidence            999999999999999864

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=2.1e-42  Score=358.62  Aligned_cols=247  Identities=23%  Similarity=0.310  Sum_probs=199.9

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCC---CcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      ...++|++.+.||+|+||.||+|.+..+   +..||||+++..  ....+.+.+|+.+++.++|+||     +++++++.
T Consensus       387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnI-----v~l~~~~~  461 (656)
T 2j0j_A          387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI-----VKLIGVIT  461 (656)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEC
T ss_pred             cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEe
Confidence            3457899999999999999999998653   467999998643  3345778899999999988877     99999885


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      + +..|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.          
T Consensus       462 ~-~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~----------  529 (656)
T 2j0j_A          462 E-NPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC----------  529 (656)
T ss_dssp             S-SSCEEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE----------
T ss_pred             c-CceEEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCC----------
Confidence            4 5689999999 899999998654 46899999999999999999999999999999999999987764          


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEAL  317 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~p  317 (438)
                                       +||+|||++.......    ....+|+.|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       530 -----------------vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~P  592 (656)
T 2j0j_A          530 -----------------VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP  592 (656)
T ss_dssp             -----------------EEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             -----------------EEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCC
Confidence                             5666666665443221    12356789999999999999999999999999999997 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+.+..+....+.....                                                 ...+..+++.+.+
T Consensus       593 f~~~~~~~~~~~i~~~~~-------------------------------------------------~~~~~~~~~~l~~  623 (656)
T 2j0j_A          593 FQGVKNNDVIGRIENGER-------------------------------------------------LPMPPNCPPTLYS  623 (656)
T ss_dssp             TTTCCHHHHHHHHHHTCC-------------------------------------------------CCCCTTCCHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCC-------------------------------------------------CCCCccccHHHHH
Confidence            998877766555533210                                                 0112345678999


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 013678          398 LLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ||.+||+.||++|||+.|+++
T Consensus       624 li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          624 LMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999999985

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=1.9e-43  Score=330.85  Aligned_cols=231  Identities=16%  Similarity=0.058  Sum_probs=182.2

Q ss_pred             eecCC-ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEe
Q 013678           84 FAIGE-NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQI  158 (438)
Q Consensus        84 ~~~~~-~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~  158 (438)
                      +..|+ .+.++|++.+.||+|+||.||+|++..+++.||||++....    ...+.+.+|+.++..+.|+||     +++
T Consensus        22 ~~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i-----v~~   96 (286)
T 3uqc_A           22 LVPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGV-----ARV   96 (286)
T ss_dssp             CCTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTB-----CCE
T ss_pred             CCCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCc-----cee
Confidence            34466 67789999999999999999999999999999999997532    334678899999988888776     999


Q ss_pred             cceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 013678          159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       159 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      ++++.+.+..|+||||+ |++|.+++..    ......+..++.||+.||+|||++||+||||||+|||++.+|.     
T Consensus        97 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~-----  167 (286)
T 3uqc_A           97 LDVVHTRAGGLVVAEWIRGGSLQEVADT----SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGD-----  167 (286)
T ss_dssp             EEEEEETTEEEEEEECCCEEEHHHHHTT----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSC-----
T ss_pred             eEEEEECCcEEEEEEecCCCCHHHHHhc----CCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCC-----
Confidence            99999999999999999 8999999854    2456678999999999999999999999999999999987664     


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                            +||+++|                 |++       .++.++|||||||++|+|++|+.|
T Consensus       168 ----------------------~kl~~~~-----------------~~~-------~~~~~~Di~slG~il~elltg~~P  201 (286)
T 3uqc_A          168 ----------------------VVLAYPA-----------------TMP-------DANPQDDIRGIGASLYALLVNRWP  201 (286)
T ss_dssp             ----------------------EEECSCC-----------------CCT-------TCCHHHHHHHHHHHHHHHHHSEEC
T ss_pred             ----------------------EEEEecc-----------------ccC-------CCCchhHHHHHHHHHHHHHHCCCC
Confidence                                  5555332                 343       378999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+.+..+.+.....                           .. .               ............+++++.+
T Consensus       202 f~~~~~~~~~~~~~~---------------------------~~-~---------------~~~~~~~~~~~~~~~~l~~  238 (286)
T 3uqc_A          202 LPEAGVRSGLAPAER---------------------------DT-A---------------GQPIEPADIDRDIPFQISA  238 (286)
T ss_dssp             SCCCSBCCCSEECCB---------------------------CT-T---------------SCBCCHHHHCTTSCHHHHH
T ss_pred             CCcCCcchhhHHHHH---------------------------Hh-c---------------cCCCChhhcccCCCHHHHH
Confidence            987543210000000                           00 0               0000011223456789999


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 013678          398 LLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ||.+||+.||++| |+.|+++
T Consensus       239 li~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          239 VAARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             HHHHHHCTTSSCC-CHHHHHH
T ss_pred             HHHHHcccCCccC-CHHHHHH
Confidence            9999999999999 9999886

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=7e-43  Score=332.26  Aligned_cols=246  Identities=20%  Similarity=0.267  Sum_probs=194.6

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      +...++|++.+.||+|+||.||+|.+..   .||+|+++...   ...+.+.+|+.+++.++|+|+     +++++++.+
T Consensus        29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~  100 (319)
T 2y4i_B           29 DIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENV-----VLFMGACMS  100 (319)
T ss_dssp             SSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTB-----CCCCEEEEC
T ss_pred             cCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCE-----eEEEEEEec
Confidence            3445789999999999999999998754   39999986432   233456789999998888776     999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                      .+.+++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++ ++            
T Consensus       101 ~~~~~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~------------  166 (319)
T 2y4i_B          101 PPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NG------------  166 (319)
T ss_dssp             SSCEEEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---------------
T ss_pred             CCceEEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CC------------
Confidence            99999999999 899999997643 4699999999999999999999999999999999999996 34            


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccC--------CCCcccccCCCcchhHHHhC---------CCCCcchhHHHHHH
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEH--------QDHSYVVSTRHYRAPEVILG---------LGWNYPCDLWSVGC  306 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--------~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DiwSlG~  306 (438)
                                     .++|+|||++....        .......||..|+|||++.+         ..++.++|||||||
T Consensus       167 ---------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~  231 (319)
T 2y4i_B          167 ---------------KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGT  231 (319)
T ss_dssp             ---------------CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHH
T ss_pred             ---------------CEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHH
Confidence                           46666666654322        11223468999999999975         34789999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhh
Q 013678          307 ILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ  386 (438)
Q Consensus       307 il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (438)
                      ++|+|++|..||...........+.....+.                                                .
T Consensus       232 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------------------------~  263 (319)
T 2y4i_B          232 IWYELHAREWPFKTQPAEAIIWQMGTGMKPN------------------------------------------------L  263 (319)
T ss_dssp             HHHHHHHSSCSSSSCCHHHHHHHHHTTCCCC------------------------------------------------C
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHhccCCCCC------------------------------------------------C
Confidence            9999999999998877665544432211000                                                0


Q ss_pred             ccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       387 ~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ....++.++.+||.+||..||++|||+.++++
T Consensus       264 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          264 SQIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            01234668999999999999999999999987

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.3e-42  Score=359.99  Aligned_cols=244  Identities=24%  Similarity=0.343  Sum_probs=196.6

Q ss_pred             eecCCccCCceEEEeeeeeecceEEEEEEECC-CCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecc
Q 013678           84 FAIGENLTPRCKILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (438)
Q Consensus        84 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~  160 (438)
                      +..|+.+.++|++.+.||+|+||.||+|.+.. +++.||||++...  ......+.+|+.++..++|+||     +++++
T Consensus        72 ~~~g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~  146 (681)
T 2pzi_A           72 LNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSI-----VQIFN  146 (681)
T ss_dssp             SCTTCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTB-----CCEEE
T ss_pred             CCCCCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCc-----CeEee
Confidence            34677888999999999999999999999976 7899999998643  3445677899999999988777     99999


Q ss_pred             eeccCCe-----EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 013678          161 WFDYRNH-----ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  234 (438)
Q Consensus       161 ~~~~~~~-----~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  234 (438)
                      ++...+.     .||||||+ |++|.+++..    .+++..++.++.||+.||.|||++||+||||||+|||++.+    
T Consensus       147 ~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~----  218 (681)
T 2pzi_A          147 FVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE----  218 (681)
T ss_dssp             EEEEECTTSCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS----
T ss_pred             eEeecCCCCCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC----
Confidence            9886554     79999999 8999987654    59999999999999999999999999999999999999542    


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhC
Q 013678          235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG  314 (438)
Q Consensus       235 l~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg  314 (438)
                                              .+||+|||++...... ....||+.|+|||++.+.. +.++|||||||++|+|++|
T Consensus       219 ------------------------~~kl~DFG~a~~~~~~-~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g  272 (681)
T 2pzi_A          219 ------------------------QLKLIDLGAVSRINSF-GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLD  272 (681)
T ss_dssp             ------------------------CEEECCCTTCEETTCC-SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSC
T ss_pred             ------------------------cEEEEecccchhcccC-CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhC
Confidence                                    5788888888765544 4468999999999998754 8999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      ..||.+....           ..+                        .    ..                 .....++.
T Consensus       273 ~~~~~~~~~~-----------~~~------------------------~----~~-----------------~~~~~~~~  296 (681)
T 2pzi_A          273 LPTRNGRYVD-----------GLP------------------------E----DD-----------------PVLKTYDS  296 (681)
T ss_dssp             CCEETTEECS-----------SCC------------------------T----TC-----------------HHHHHCHH
T ss_pred             CCCCcccccc-----------ccc------------------------c----cc-----------------cccccCHH
Confidence            9888642100           000                        0    00                 00012357


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCC
Q 013678          395 LIDLLQGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      +.+||.+||+.||++||+..+++.|+|+
T Consensus       297 l~~li~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          297 YGRLLRRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             HHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             HHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence            8999999999999999998888888776

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=100.00  E-value=3.5e-35  Score=299.10  Aligned_cols=182  Identities=20%  Similarity=0.118  Sum_probs=126.9

Q ss_pred             EEeeeeeecceEEEEEEECCCCcEEEEEEeecc-----------hhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceec
Q 013678           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-----------NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~  163 (438)
                      .....+.|++|.+..++....|+.||+|++.+.           ....+.+.+|+++|+++ .|+||     ++++++++
T Consensus       238 w~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i-----~~~~~~~e  312 (569)
T 4azs_A          238 WQNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDA-----PAVLAHGE  312 (569)
T ss_dssp             EECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCC-----CCEEEEEE
T ss_pred             hhhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCe-----eEEEEEEE
Confidence            344578888888888888888999999999642           23456788999999998 45555     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      +++.+||||||+ |++|.++|.+.+  .+++.   .|+.||+.||+|||++|||||||||+|||++.+|           
T Consensus       313 d~~~~yLVMEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg-----------  376 (569)
T 4azs_A          313 NAQSGWLVMEKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQ-----------  376 (569)
T ss_dssp             CSSEEEEEEECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTS-----------
T ss_pred             ECCEEEEEEecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCC-----------
Confidence            999999999999 999999998765  67654   5889999999999999999999999999997666           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~  315 (438)
                                      .+||+|||+|+.....   ..+.+||+.|||||++.+. +..++|+||+|++++++.++.
T Consensus       377 ----------------~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          377 ----------------HARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPW  435 (569)
T ss_dssp             ----------------CEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred             ----------------CEEEeecccCeeCCCCCccccCceechhhccHHHhCCC-CCCcccccccccchhhhcccc
Confidence                            5677777776654332   3346899999999998764 577899999999988876654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.95  E-value=1.1e-28  Score=249.76  Aligned_cols=179  Identities=19%  Similarity=0.174  Sum_probs=138.3

Q ss_pred             EEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---------hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           95 KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ...+.||+|+||.||+|.  ..++.+++|+.....         ...+.+.+|+.++++++|+||     +++..++...
T Consensus       339 ~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nI-----v~~~~~~~~~  411 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGI-----PAPYIFDVDL  411 (540)
T ss_dssp             ---------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTC-----CCCCEEEEET
T ss_pred             CCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCc-----CceEEEEEeC
Confidence            446789999999999994  457789999864211         123557899999999999988     7444444455


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +..||||||+ +++|.+++..          +..++.||+.||+|||++||+||||||+|||++.               
T Consensus       412 ~~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~---------------  466 (540)
T 3en9_A          412 DNKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK---------------  466 (540)
T ss_dssp             TTTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS---------------
T ss_pred             CccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC---------------
Confidence            6679999999 8999999864          5689999999999999999999999999999942               


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC----------cccccCCCcchhHHHhC--CCCCcchhHHHHHHHHHHHH
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----------SYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELC  312 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~ell  312 (438)
                                    .+||+|||+++......          ....||+.|||||++.+  ..|+..+|+||..+-..+-+
T Consensus       467 --------------~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v  532 (540)
T 3en9_A          467 --------------DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDV  532 (540)
T ss_dssp             --------------SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHH
T ss_pred             --------------eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                          58999999988765432          24689999999999987  56888899999999888888


Q ss_pred             hCCCCCC
Q 013678          313 SGEALFQ  319 (438)
Q Consensus       313 tg~~pf~  319 (438)
                      .++.+|.
T Consensus       533 ~~r~rY~  539 (540)
T 3en9_A          533 ERRARYV  539 (540)
T ss_dssp             HTCSCCC
T ss_pred             HhccccC
Confidence            7776663

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.93  E-value=8e-26  Score=210.35  Aligned_cols=144  Identities=24%  Similarity=0.319  Sum_probs=113.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-------------------hhHHHHHHHHHHHHHHHhcCCCC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------------------KYREAAMIEIDVLQRLARHDIGG  152 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------------------~~~~~~~~E~~~l~~l~~~~i~~  152 (438)
                      ..|.+.+.||+|+||.||+|.+ .+|+.||||+++...                   .....+.+|+.+++.+.|  +  
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~--~--  164 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG--L--  164 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT--S--
T ss_pred             eEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC--C--
Confidence            3466779999999999999999 889999999986422                   134568899999999983  2  


Q ss_pred             cceEEecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 013678          153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       153 ~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  231 (438)
                          ++.+++.. +..|+||||+ |++|.+ +.      .  .....++.||+.||.|||++||+||||||+|||++ +|
T Consensus       165 ----~v~~~~~~-~~~~lvmE~~~g~~L~~-l~------~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~  229 (282)
T 1zar_A          165 ----AVPKVYAW-EGNAVLMELIDAKELYR-VR------V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EE  229 (282)
T ss_dssp             ----SSCCEEEE-ETTEEEEECCCCEEGGG-CC------C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TT
T ss_pred             ----CcCeEEec-cceEEEEEecCCCcHHH-cc------h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CC
Confidence                23333333 4569999999 889987 42      1  23557999999999999999999999999999997 55


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC
Q 013678          232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG  292 (438)
Q Consensus       232 ~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~  292 (438)
                                                 .+||+|||+|.          .+..++|||++..
T Consensus       230 ---------------------------~vkl~DFG~a~----------~~~~~~a~e~l~r  253 (282)
T 1zar_A          230 ---------------------------GIWIIDFPQSV----------EVGEEGWREILER  253 (282)
T ss_dssp             ---------------------------EEEECCCTTCE----------ETTSTTHHHHHHH
T ss_pred             ---------------------------cEEEEECCCCe----------ECCCCCHHHHHHH
Confidence                                       57888888874          3556899999854

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.89  E-value=7.3e-23  Score=188.02  Aligned_cols=138  Identities=19%  Similarity=0.173  Sum_probs=109.9

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcE--EEEEEeecchh-------------------------hHHHHHHHHHHHHHH
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKEL--VAIKIVRSINK-------------------------YREAAMIEIDVLQRL  145 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~--vaiK~~~~~~~-------------------------~~~~~~~E~~~l~~l  145 (438)
                      -|++.+.||+|+||.||+|.+..+|+.  ||||+++....                         ....+.+|+.++..+
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            378999999999999999998778989  99999754211                         113578899999999


Q ss_pred             HhcCCCCcceEEecceeccCCeEEEEEccCC--C----CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCceec
Q 013678          146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLG--P----SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHT  218 (438)
Q Consensus       146 ~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~~--~----~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivHr  218 (438)
                      .|+++..+.++..       +..+|||||++  |    +|.++...     .++..+..++.||+.||.||| ++||+||
T Consensus       128 ~~~~i~~p~~~~~-------~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHr  195 (258)
T 1zth_A          128 KEAGVSVPQPYTY-------MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHA  195 (258)
T ss_dssp             HHTTCCCCCEEEE-------ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECS
T ss_pred             HhCCCCCCeEEEc-------CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence            9998755655542       24689999994  3    78776432     234567899999999999999 9999999


Q ss_pred             CCCCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCccc
Q 013678          219 DLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE  271 (438)
Q Consensus       219 Dlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  271 (438)
                      ||||+|||++.                             .++|+|||+|...
T Consensus       196 Dlkp~NILl~~-----------------------------~~~liDFG~a~~~  219 (258)
T 1zth_A          196 DLSEYNIMYID-----------------------------KVYFIDMGQAVTL  219 (258)
T ss_dssp             SCSTTSEEESS-----------------------------SEEECCCTTCEET
T ss_pred             CCCHHHEEEcC-----------------------------cEEEEECcccccC
Confidence            99999999942                             5889999988654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.80  E-value=3.5e-19  Score=170.13  Aligned_cols=145  Identities=19%  Similarity=0.167  Sum_probs=104.6

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-----------------------hhHHHHHHHHHHHHHHHhcCC
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------------------KYREAAMIEIDVLQRLARHDI  150 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------------------~~~~~~~~E~~~l~~l~~~~i  150 (438)
                      |++.++||.|+||.||+|.+. +|+.||||+++...                       ..+-.+.+|...|.++.+.++
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            899999999999999999974 68899999875210                       011223568899999988776


Q ss_pred             CCcceEEecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 013678          151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  229 (438)
Q Consensus       151 ~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~  229 (438)
                      ..+..+   +..    ..+|||||+ |++|.++.        ....+..++.||+.+|.+||++|||||||||.|||++.
T Consensus       176 ~vp~p~---~~~----~~~LVME~i~G~~L~~l~--------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~  240 (397)
T 4gyi_A          176 PVPEPI---AQS----RHTIVMSLVDALPMRQVS--------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIRE  240 (397)
T ss_dssp             SCCCEE---EEE----TTEEEEECCSCEEGGGCC--------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEE
T ss_pred             CCCeee---ecc----CceEEEEecCCccHhhhc--------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeC
Confidence            333322   211    137999999 77775432        22345678999999999999999999999999999988


Q ss_pred             CcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCccc
Q 013678          230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE  271 (438)
Q Consensus       230 ~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  271 (438)
                      +|...-.+                 .....+.|+||+.+...
T Consensus       241 dgd~~d~~-----------------~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          241 EKDAEDPS-----------------SITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             EECSSCTT-----------------SEEEEEEECCCTTCEET
T ss_pred             CCCccccc-----------------ccccceEEEEeCCcccC
Confidence            77321111                 01124789999987543

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.38  E-value=1.5e-12  Score=119.28  Aligned_cols=108  Identities=9%  Similarity=0.062  Sum_probs=82.6

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      +.|++...++.|+.+.||++...  ++.+++|+..... .....+.+|+.+++.+.. .+   .+.++++++.+.+..|+
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~-~~---~vP~v~~~~~~~~~~~l   87 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEG-KL---PVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT-TS---CCCCEEEEEEETTEEEE
T ss_pred             ccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhc-CC---CCCeEEEEEecCCceEE
Confidence            45889999999999999999743  6789999986422 223468899999999965 22   34677777778889999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE  212 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  212 (438)
                      |||++ |.+|.+.+.       +......++.+++.+|..||+
T Consensus        88 v~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           88 LMSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             EEECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhC
Confidence            99999 888887531       122345788899999999998

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.26  E-value=1.6e-11  Score=112.14  Aligned_cols=107  Identities=12%  Similarity=0.066  Sum_probs=73.6

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      ..|.+....+.|..+.||++.. .+|..+++|+....  ....+.+|+.+++.+.+.++   .+.+++.+...++..++|
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~---~vP~~~~~~~~~~~~~~v   93 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGV---PCAAVLDVVTEAGRDWLL   93 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTC---CBCCEEEEEECSSCEEEE
T ss_pred             CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCC---CCCeEEEeccCCCCCEEE
Confidence            3456654445666799999964 55677999997643  23457889999999987654   235566667777789999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR  214 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  214 (438)
                      |||+ |.+|.  ..     ..+   ...++.+++..|..||+..
T Consensus        94 ~e~i~G~~l~--~~-----~~~---~~~~~~~l~~~l~~lh~~~  127 (264)
T 1nd4_A           94 LGEVPGQDLL--SS-----HLA---PAEKVSIMADAMRRLHTLD  127 (264)
T ss_dssp             EECCSSEETT--TS-----CCC---HHHHHHHHHHHHHHHTTSC
T ss_pred             EEecCCcccC--cC-----cCC---HhHHHHHHHHHHHHHhCCC
Confidence            9999 77773  11     122   2356677778888888643

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=99.16  E-value=7.3e-11  Score=110.57  Aligned_cols=102  Identities=17%  Similarity=0.141  Sum_probs=71.5

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHh-cCCCCcceEEecceeccCC---eEEEEEc
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR-HDIGGTRCVQIRNWFDYRN---HICIVFE  173 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~-~~i~~~~iv~~~~~~~~~~---~~~lv~e  173 (438)
                      +.++.|....||++.     ..+++|+... ......+.+|..+++.+.. ..+..|.++   ......+   ..|+||+
T Consensus        26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~-~~~~~~~~~E~~~l~~l~~~~~v~vP~~~---~~~~~~~~~~~~~~vm~   96 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN-----RDFIFKFPKH-SRGSTNLFNEVNILKRIHNKLPLPIPEVV---FTGMPSETYQMSFAGFT   96 (304)
T ss_dssp             CEEEECSSEEEEEST-----TSEEEEEESS-HHHHHHHHHHHHHHHHHTTSSSSCCCCEE---EECCCCSSCSCSCEEEE
T ss_pred             EecCCCCcceEEEEC-----CEEEEEecCC-cchHHHHHHHHHHHHHHHhcCCCCCCceE---eecCCCCCCCcceEEEc
Confidence            458999999999863     3589998653 2345678899999999844 444334433   3322222   4588999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 013678          174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE  212 (438)
Q Consensus       174 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  212 (438)
                      ++ |.+|.+....    .++..+...++.|++..|..||+
T Consensus        97 ~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~  132 (304)
T 3sg8_A           97 KIKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHS  132 (304)
T ss_dssp             CCCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHc
Confidence            99 7777654332    47788888888899888888886

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.13  E-value=1.9e-10  Score=110.37  Aligned_cols=108  Identities=14%  Similarity=0.153  Sum_probs=76.7

Q ss_pred             EEeeeeeecceEEEEEEECCCCcEEEEEEee--cch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC---CeE
Q 013678           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR---NHI  168 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~--~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~---~~~  168 (438)
                      .++.|+.|.++.||++...  +..+++|+..  ...  .....+.+|+.+++.|...++   .+.+++.++.+.   +..
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~v---pvP~~~~~~~~~~~~g~~  116 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDV---PVAKMYALCEDESVIGRA  116 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSS---CCCCEEEEECCTTTTSSC
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCC---CCCcEEEECCCCCccCCe
Confidence            4678999999999999754  4568899875  322  234577889999999987554   345566666554   468


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE  212 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  212 (438)
                      |+||||+ |..+.+.    ....++......++.+++..|..||+
T Consensus       117 ~~vme~v~G~~l~~~----~~~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          117 FYIMEFVSGRVLWDQ----SLPGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             EEEEECCCCBCCCCT----TCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEecCCeecCCC----ccccCCHHHHHHHHHHHHHHHHHHhC
Confidence            9999999 7666431    11247788889999999999999997

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.74  E-value=1.9e-07  Score=87.25  Aligned_cols=103  Identities=17%  Similarity=0.117  Sum_probs=66.6

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhc-CCCCcceEEeccee-ccCCeEEEEEcc
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGGTRCVQIRNWF-DYRNHICIVFEK  174 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~~~iv~~~~~~-~~~~~~~lv~e~  174 (438)
                      ++.++.|....||+.     +..+++|+... ......+.+|..+|+.|.+. .+.   +.+++.+. ...+..++|||+
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~---VP~~~~~~~~~~g~~~~v~e~   94 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVN---IPQYVYIGKRSDGNPFVGYRK   94 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSB---CCCEEEEEECTTSCEEEEEEC
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCC---CCCeEeecccCCCceEEEEec
Confidence            456788999999988     45588998532 33456788999999999874 232   23333333 245667899999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 013678          175 L-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE  212 (438)
Q Consensus       175 ~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  212 (438)
                      + |.+|.+..-.    .++......++.++...|..||+
T Consensus        95 i~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~  129 (306)
T 3tdw_A           95 VQGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSA  129 (306)
T ss_dssp             CCSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhc
Confidence            9 7777653211    24555555555555555555553

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.56  E-value=5.5e-07  Score=82.35  Aligned_cols=102  Identities=12%  Similarity=0.145  Sum_probs=70.5

Q ss_pred             eeeeecce-EEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-C
Q 013678           99 KMGEGTFG-QVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-G  176 (438)
Q Consensus        99 ~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~  176 (438)
                      .+..|..+ .||+......+..+++|+-...  ....+.+|..+|+.|.. .+   .+.+++.++.+.+..++|||++ |
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~-~v---PVP~v~~~~~~~~~~~lvme~l~G  104 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTA-FM---PLPTIKHFIRTPDDAWLLTTAIPG  104 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTT-TS---CCCCEEEEEEETTEEEEEEECCCS
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhcc-CC---CcCeEEEEEEECCeEEEEEEeeCC
Confidence            34555554 6999887777788999986542  34567889999999964 44   2456677777888999999999 7


Q ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 013678          177 PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE  212 (438)
Q Consensus       177 ~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  212 (438)
                      .++.+.....      ......+..++...|..||+
T Consensus       105 ~~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~  134 (272)
T 4gkh_A          105 KTAFQVLEEY------PDSGENIVDALAVFLRRLHS  134 (272)
T ss_dssp             EEHHHHHHHC------GGGHHHHHHHHHHHHHHHHT
T ss_pred             ccccccccCC------HHHHHHHHHHHHHHHHHhcC
Confidence            7887765432      12233455666666666664

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.35  E-value=2.1e-06  Score=83.27  Aligned_cols=77  Identities=21%  Similarity=0.224  Sum_probs=48.7

Q ss_pred             EEeeeeeecceEEEEEEECCCCcEEEEEEeecch--------hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      -++.||.|.++.||++....+++.|+||......        ...+....|..+++.+....  ...+.+++.+  +.+.
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~--~~~vP~~~~~--d~~~  109 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHV--PHLVPRVFYS--DTEM  109 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTC--GGGSCCEEEE--ETTT
T ss_pred             EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhC--CCCcCeEEEE--cCCc
Confidence            3568999999999999766667889999864321        12245678999999886531  1122344433  2334


Q ss_pred             EEEEEccCC
Q 013678          168 ICIVFEKLG  176 (438)
Q Consensus       168 ~~lv~e~~~  176 (438)
                      .++|||++.
T Consensus       110 ~~lvmE~l~  118 (397)
T 2olc_A          110 AVTVMEDLS  118 (397)
T ss_dssp             TEEEECCCT
T ss_pred             cEEEEEeCC
Confidence            589999993

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.23  E-value=1.7e-05  Score=74.85  Aligned_cols=77  Identities=12%  Similarity=0.212  Sum_probs=46.9

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEec-c--eeccCCeEEEEEc
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR-N--WFDYRNHICIVFE  173 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~-~--~~~~~~~~~lv~e  173 (438)
                      ++.|+.|..+.||++... +| .+++|+....   ......|..+++.|...++..|.++... +  +....+..++||+
T Consensus        37 ~~~l~gG~~n~~~~v~~~-~~-~~vlk~~~~~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~  111 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTD-SG-AVCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD  111 (346)
T ss_dssp             EEECC----CEEEEEEET-TE-EEEEEEECSC---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred             eeeccccccCcEEEEEeC-CC-CEEEEecCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence            456666778899999753 33 4899998752   2345568888888887665334433321 1  1234567899999


Q ss_pred             cC-CCC
Q 013678          174 KL-GPS  178 (438)
Q Consensus       174 ~~-~~~  178 (438)
                      |+ |.+
T Consensus       112 ~i~G~~  117 (346)
T 2q83_A          112 WIEGRP  117 (346)
T ss_dssp             CCCCBC
T ss_pred             eecCcc
Confidence            99 643

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.19  E-value=3.7e-06  Score=80.17  Aligned_cols=82  Identities=7%  Similarity=0.058  Sum_probs=54.7

Q ss_pred             EEEeee-eeecceEEEEEEEC--C----CCcEEEEEEeecch---h-hHHHHHHHHHHHHHHHhc-CCCCcceEEeccee
Q 013678           95 KILSKM-GEGTFGQVVECFDN--E----KKELVAIKIVRSIN---K-YREAAMIEIDVLQRLARH-DIGGTRCVQIRNWF  162 (438)
Q Consensus        95 ~~~~~l-g~G~~g~V~~~~~~--~----~~~~vaiK~~~~~~---~-~~~~~~~E~~~l~~l~~~-~i~~~~iv~~~~~~  162 (438)
                      ..++.| +.|....+|+....  .    +++.+++|+.....   . ....+.+|+.+++.|... .+..   .+++.+.
T Consensus        23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpv---P~v~~~~   99 (357)
T 3ats_A           23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPV---PRVRWIE   99 (357)
T ss_dssp             EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCC---CCEEEEE
T ss_pred             EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCC---CcEEEEc
Confidence            445778 88889999988643  0    25678999865432   1 125678899999999875 5433   4444444


Q ss_pred             ccC---CeEEEEEccC-CCCH
Q 013678          163 DYR---NHICIVFEKL-GPSL  179 (438)
Q Consensus       163 ~~~---~~~~lv~e~~-~~~L  179 (438)
                      .+.   +..++|||++ |.++
T Consensus       100 ~~~~~~g~~~~v~e~l~G~~l  120 (357)
T 3ats_A          100 TTGDVLGTPFFLMDYVEGVVP  120 (357)
T ss_dssp             CSSTTTSSCEEEEECCCCBCC
T ss_pred             cCCCccCCceEEEEecCCCCh
Confidence            443   4578999999 6543

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.95  E-value=4.6e-05  Score=70.70  Aligned_cols=69  Identities=10%  Similarity=-0.018  Sum_probs=46.6

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-  175 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-  175 (438)
                      ++.|+.|....+|++      ..+++|+............+|+.+++.+...++. |.++   ....  +.-++|+||+ 
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~-P~~~---~~~~--~~~~~v~e~i~   90 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVS-PEVL---HVDP--ATGVMVTRYIA   90 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHTTSS-CCEE---EECT--TTCCEEEECCT
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCC-CceE---EEEC--CCCEEEEeecC
Confidence            577899999999998      4488998764322222345799999999888774 4443   3332  2346889999 


Q ss_pred             CC
Q 013678          176 GP  177 (438)
Q Consensus       176 ~~  177 (438)
                      +|
T Consensus        91 ~g   92 (301)
T 3dxq_A           91 GA   92 (301)
T ss_dssp             TC
T ss_pred             CC
Confidence            65

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.85  E-value=0.00012  Score=68.10  Aligned_cols=77  Identities=21%  Similarity=0.218  Sum_probs=58.0

Q ss_pred             EEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      -++.|+.|....+|+...  ++..+++|+....  ....+..|...|+.|....  ...+.+++.+....+..++|||++
T Consensus        40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~--~v~VP~vl~~~~~~g~~~lvme~l  113 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS--YRSMFRAEADQLALLAKTN--SINVPLVYGIGNSQGHSFLLLEAL  113 (312)
T ss_dssp             EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTT--SSBCCCEEEEEECSSEEEEEEECC
T ss_pred             eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhC--CCCcceEEEEeecCCceEEEEEec
Confidence            457799999999999974  4667889987643  3566889999999998652  124456666666678899999999


Q ss_pred             -CCC
Q 013678          176 -GPS  178 (438)
Q Consensus       176 -~~~  178 (438)
                       |..
T Consensus       114 ~G~~  117 (312)
T 3jr1_A          114 NKSK  117 (312)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence             654

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.67  E-value=0.00028  Score=60.94  Aligned_cols=97  Identities=13%  Similarity=0.003  Sum_probs=61.7

Q ss_pred             CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcccCCCC
Q 013678          178 SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK  256 (438)
Q Consensus       178 ~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~  256 (438)
                      +|.++|...+ .++++++++.++.|.+.+|.-+- .+.-..+=+.|..|++..+|.+...+                   
T Consensus        34 SL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-------------------   93 (229)
T 2yle_A           34 SLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-------------------   93 (229)
T ss_dssp             EHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-------------------
T ss_pred             cHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-------------------
Confidence            7999998766 68999999999999999988762 22212333446888888877553321                   


Q ss_pred             CCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh
Q 013678          257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  313 (438)
Q Consensus       257 ~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt  313 (438)
                               +.+.         .....+.|||... ...+.+.=|||||++||..+-
T Consensus        94 ---------~~s~---------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A           94 ---------AADD---------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             ---------C---------------------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred             ---------cccc---------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence                     0000         1122456777652 244678899999999999874

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.67  E-value=0.00015  Score=70.57  Aligned_cols=76  Identities=17%  Similarity=0.236  Sum_probs=44.0

Q ss_pred             EEeeeeeecceEEEEEEECCCCcEEEEEEeec-----chh---hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRS-----INK---YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~---~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      -++.||.|..+.||++..  +++.++||....     ...   .......|.+++..+....  ...+.+++.+.  .+.
T Consensus        38 ~i~~l~~G~~n~vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~--~~~vP~v~~~~--~~~  111 (420)
T 2pyw_A           38 VIKEVGDGNLNFVFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLS--PDHVPEVYHFD--RTM  111 (420)
T ss_dssp             EEEECCCSSSCEEEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHS--GGGSCCEEEEE--TTT
T ss_pred             EEEEccCCCcEEEEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhC--CCCCCeEEEEC--CCc
Confidence            457789999999999963  467799994221     011   0122334555554443221  12234555443  456


Q ss_pred             EEEEEccC-CC
Q 013678          168 ICIVFEKL-GP  177 (438)
Q Consensus       168 ~~lv~e~~-~~  177 (438)
                      .++|||++ .+
T Consensus       112 ~~lv~e~l~~g  122 (420)
T 2pyw_A          112 ALIGMRYLEPP  122 (420)
T ss_dssp             TEEEECCCCTT
T ss_pred             cEEEEeecCCc
Confidence            78999999 76

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.58  E-value=0.00079  Score=61.77  Aligned_cols=78  Identities=12%  Similarity=0.026  Sum_probs=54.0

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhc-CCCCcceEEecceeccCCeEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARH-DIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~-~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ....-++.+|.|..+.||+... .+|+.|++|+..... .....+..|...|+.|... .+..|   +++.+.    .-+
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP---~v~~~~----~~~   86 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVP---QVAGWD----DRT   86 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSC---CEEEEE----TTE
T ss_pred             CCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcc---eEEecc----Cce
Confidence            3456778999999999999985 578889999865322 2234577899999999654 33333   333332    236


Q ss_pred             EEEccC-CC
Q 013678          170 IVFEKL-GP  177 (438)
Q Consensus       170 lv~e~~-~~  177 (438)
                      +|||++ ++
T Consensus        87 lv~e~l~~~   95 (288)
T 3f7w_A           87 LAMEWVDER   95 (288)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEeeccc
Confidence            899998 44

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.58  E-value=0.00057  Score=63.77  Aligned_cols=80  Identities=10%  Similarity=0.066  Sum_probs=49.4

Q ss_pred             EEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecc---eeccCCeEEEEE
Q 013678           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN---WFDYRNHICIVF  172 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~---~~~~~~~~~lv~  172 (438)
                      -++.|+.|....+|++... +| .+++|+.... ...+.+..|+.++..|...++..|.++...+   +....+..++||
T Consensus        26 ~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~  102 (322)
T 2ppq_A           26 SYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALI  102 (322)
T ss_dssp             EEEEECC---EEEEEEEES-SC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEE
T ss_pred             EeeccCCCcccceEEEEeC-Cc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEE
Confidence            4567888888999999753 34 5889988652 1234566799999999887664444433211   112245679999


Q ss_pred             ccC-CCC
Q 013678          173 EKL-GPS  178 (438)
Q Consensus       173 e~~-~~~  178 (438)
                      +++ |..
T Consensus       103 ~~l~G~~  109 (322)
T 2ppq_A          103 SFLEGMW  109 (322)
T ss_dssp             ECCCCBC
T ss_pred             EeCCCcC
Confidence            999 543

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.51  E-value=0.00093  Score=62.46  Aligned_cols=77  Identities=14%  Similarity=0.191  Sum_probs=50.1

Q ss_pred             eeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecc--eeccCCeEEEEEccC
Q 013678           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN--WFDYRNHICIVFEKL  175 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~--~~~~~~~~~lv~e~~  175 (438)
                      ..|+ |....||++.. .+|+.+++|+.+........+..|..++..|...++..+.++..-+  +....+..++||+++
T Consensus        32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i  109 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV  109 (328)
T ss_dssp             EEEC-CSSSEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             Eeec-CcccceEEEEc-CCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence            3455 77788998864 3466799999864333456677899999999876653333332211  122345778999999


Q ss_pred             C
Q 013678          176 G  176 (438)
Q Consensus       176 ~  176 (438)
                      .
T Consensus       110 ~  110 (328)
T 1zyl_A          110 G  110 (328)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.48  E-value=0.00044  Score=64.94  Aligned_cols=79  Identities=10%  Similarity=0.026  Sum_probs=42.2

Q ss_pred             EeeeeeecceE-EEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678           97 LSKMGEGTFGQ-VVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus        97 ~~~lg~G~~g~-V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      ++.|+.|.... +|+... .+++.+++|......  ......|+.+++.+...++..|.++   .+....+  ++|||++
T Consensus        23 ~~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~---~~d~~~g--~ll~e~l   94 (333)
T 3csv_A           23 RTPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIY---AEEHARG--LLLIEDL   94 (333)
T ss_dssp             ECC--------CCEEEEC-TTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEE---EEETTTT--EEEECCC
T ss_pred             eeECCCCCCCceEEEEEc-CCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCcee---eecCCCC--EEEEeeC
Confidence            34565555444 667653 235667777654321  1345678999999987765444444   3333333  6899999


Q ss_pred             -CCCHHHHH
Q 013678          176 -GPSLYDFL  183 (438)
Q Consensus       176 -~~~L~~~l  183 (438)
                       +.++.+.+
T Consensus        95 ~~~~l~~~l  103 (333)
T 3csv_A           95 GDALFTEVI  103 (333)
T ss_dssp             CSCBHHHHH
T ss_pred             CCcchHHHh
Confidence             55665444

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.35  E-value=0.00037  Score=66.63  Aligned_cols=74  Identities=14%  Similarity=0.174  Sum_probs=46.7

Q ss_pred             EeeeeeecceEEEEEEECC-------CCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           97 LSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      ++.|..|-...+|++....       +++.|++|+............+|..+++.|...++.    .++++.+.+    .
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~----P~ll~~~~~----g  126 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLG----PQLYGVFPE----G  126 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSS----CCEEEEETT----E
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCC----CeEEEEcCC----c
Confidence            3567778888899987642       357899998644323345667899999999988773    344555554    2


Q ss_pred             EEEccC-CCC
Q 013678          170 IVFEKL-GPS  178 (438)
Q Consensus       170 lv~e~~-~~~  178 (438)
                      +||||+ |.+
T Consensus       127 ~v~e~i~G~~  136 (379)
T 3feg_A          127 RLEQYIPSRP  136 (379)
T ss_dssp             EEEECCSEEE
T ss_pred             cEEEEecCcc
Confidence            899999 543

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.31  E-value=0.00059  Score=66.56  Aligned_cols=71  Identities=14%  Similarity=0.187  Sum_probs=49.8

Q ss_pred             EEeeeeeecceEEEEEEECC-------CCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           96 ILSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      -++.|+.|....||++....       .++.|++|+.... ...+.+.+|..++..|...++. |   ++++.+.+    
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~-P---~l~~~~~~----  147 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLG-P---KLYGIFSG----  147 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSS-S---CEEEEETT----
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCC-C---cEEEEeCC----
Confidence            45678889899999998643       2577999998431 1114556899999999887762 3   34444443    


Q ss_pred             EEEEccC
Q 013678          169 CIVFEKL  175 (438)
Q Consensus       169 ~lv~e~~  175 (438)
                      .+||||+
T Consensus       148 g~v~e~l  154 (429)
T 1nw1_A          148 GRLEEYI  154 (429)
T ss_dssp             EEEECCC
T ss_pred             CEEEEEe
Confidence            2899998

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.28  E-value=0.00065  Score=64.80  Aligned_cols=74  Identities=19%  Similarity=0.164  Sum_probs=45.5

Q ss_pred             EEeeeeeecceEEEEEEECC--------CCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           96 ILSKMGEGTFGQVVECFDNE--------KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~--------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      -++.|+.|....+|++....        .++.+++|+.............|..+++.+...++ .|.+   ++.+.  + 
T Consensus        37 ~~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~-~P~~---~~~~~--~-  109 (369)
T 3c5i_A           37 RVKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKI-APQL---LNTFN--G-  109 (369)
T ss_dssp             EEEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTS-SCCE---EEEET--T-
T ss_pred             EEEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCC-CCce---EEecC--C-
Confidence            35678888888999997643        13678999876433222234679999999987765 3333   33332  2 


Q ss_pred             EEEEEccC-CC
Q 013678          168 ICIVFEKL-GP  177 (438)
Q Consensus       168 ~~lv~e~~-~~  177 (438)
                       ++||||+ |.
T Consensus       110 -~~v~e~i~G~  119 (369)
T 3c5i_A          110 -GRIEEWLYGD  119 (369)
T ss_dssp             -EEEEECCCSE
T ss_pred             -cEEEEEecCC
Confidence             6899999 54

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.96  E-value=0.0054  Score=57.65  Aligned_cols=72  Identities=15%  Similarity=0.150  Sum_probs=46.1

Q ss_pred             eeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCC-CcceEEec-c--eeccCCeEEEEEccC-
Q 013678          101 GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG-GTRCVQIR-N--WFDYRNHICIVFEKL-  175 (438)
Q Consensus       101 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~-~~~iv~~~-~--~~~~~~~~~lv~e~~-  175 (438)
                      |.|....||++.. .+| .+++|+.....     ...|+.+++.|...++. .+.++... +  +....+..++||+|+ 
T Consensus        32 G~g~~N~vy~v~~-~~g-~~vLK~~~~~~-----~~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~  104 (339)
T 3i1a_A           32 GADTNAFAYQADS-ESK-SYFIKLKYGYH-----DEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH  104 (339)
T ss_dssp             TSCSSCEEEEEEC-SSC-EEEEEEEECSS-----CCHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred             cCccccceEEEEe-CCC-CEEEEEecCcc-----chHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence            4444678999974 344 79999876533     24688889999877663 23323221 1  123357889999999 


Q ss_pred             CCCH
Q 013678          176 GPSL  179 (438)
Q Consensus       176 ~~~L  179 (438)
                      |..+
T Consensus       105 G~~~  108 (339)
T 3i1a_A          105 APNG  108 (339)
T ss_dssp             CCBT
T ss_pred             CCcC
Confidence            6544

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=96.94  E-value=0.0067  Score=59.45  Aligned_cols=74  Identities=15%  Similarity=0.089  Sum_probs=48.2

Q ss_pred             EEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC
Q 013678           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      -++.|+.|-...+|++.....+..+++|+........-...+|..++..|...++.    .++++.+..    .+||||+
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~----P~ll~~~~~----G~v~e~I  183 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIA----KKIYVFFTN----GRIEEFM  183 (458)
T ss_dssp             EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSB----CCEEEEETT----EEEEECC
T ss_pred             EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCC----CCEEEEeCC----eEEEEee
Confidence            45678889999999998754457899998754221111225799999999877662    345555532    2599998


Q ss_pred             -CC
Q 013678          176 -GP  177 (438)
Q Consensus       176 -~~  177 (438)
                       |.
T Consensus       184 ~G~  186 (458)
T 2qg7_A          184 DGY  186 (458)
T ss_dssp             CSE
T ss_pred             CCc
Confidence             53

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=96.22  E-value=0.006  Score=59.04  Aligned_cols=75  Identities=16%  Similarity=0.119  Sum_probs=49.8

Q ss_pred             EEeeeeeecceEEEEEEECCC-------CcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           96 ILSKMGEGTFGQVVECFDNEK-------KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      -++.|..|-...+|++.....       ++.|++|+........-...+|..+++.+...++ .|.   +++.+.  +  
T Consensus        74 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi-~P~---l~~~~~--~--  145 (424)
T 3mes_A           74 EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINI-APN---IIADFP--E--  145 (424)
T ss_dssp             EEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTS-SCC---EEEEET--T--
T ss_pred             EEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCC-CCC---EEEEcC--C--
Confidence            456777888889999976421       5779999875433222234679999999988776 233   333332  2  


Q ss_pred             EEEEccC-CCC
Q 013678          169 CIVFEKL-GPS  178 (438)
Q Consensus       169 ~lv~e~~-~~~  178 (438)
                      ++||||+ |.+
T Consensus       146 ~~I~efI~G~~  156 (424)
T 3mes_A          146 GRIEEFIDGEP  156 (424)
T ss_dssp             EEEEECCCSEE
T ss_pred             CEEEEEeCCcc
Confidence            6889999 644

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=95.37  E-value=0.058  Score=51.83  Aligned_cols=72  Identities=17%  Similarity=0.230  Sum_probs=42.0

Q ss_pred             EEeeeeeecceEEEEEEECC-------CCcEEEEEEeecchhh-------------------HHHHHHHHHHHHHHHhcC
Q 013678           96 ILSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSINKY-------------------REAAMIEIDVLQRLARHD  149 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~~~-------------------~~~~~~E~~~l~~l~~~~  149 (438)
                      -++.|+-|-.-.+|++....       ..+.|++++.......                   ......|..+...+...+
T Consensus        56 ~v~~lsGG~SN~~y~v~~~~~~~~~~~~~~~~llRi~g~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~ls~~g  135 (401)
T 3g15_A           56 HISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERS  135 (401)
T ss_dssp             EEEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCCccccceEEEEECCCCcccccCCCeEEEEeCCCCccchhhhhHHHHHHHHHHhccCCCCCcchhHHHHHHHhCC
Confidence            35678778888899997643       2356888876421110                   011224666777777666


Q ss_pred             CCCcceEEecceeccCCeEEEEEccC
Q 013678          150 IGGTRCVQIRNWFDYRNHICIVFEKL  175 (438)
Q Consensus       150 i~~~~iv~~~~~~~~~~~~~lv~e~~  175 (438)
                      ++    .++++.+..    .+|++|+
T Consensus       136 ~~----p~l~~~f~~----g~i~e~i  153 (401)
T 3g15_A          136 LG----PKLYGIFPQ----GRLEQFI  153 (401)
T ss_dssp             SS----CCEEEEETT----EEEEECC
T ss_pred             CC----CEEEEEECC----cEEEEec
Confidence            52    355565553    2566776

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	438
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	7e-54
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-49
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-49
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	8e-49
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	7e-48
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	9e-48
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-47
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-47
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-47
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-47
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-46
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-45
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-45
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-45
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-45
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-43
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-43
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-43
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	5e-43
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-42
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-42
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	7e-42
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	8e-41
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-40
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-40
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-40
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	7e-39
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-38
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-37
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	6e-37
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-36
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-36
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	5e-35
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-34
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-34
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	9e-34
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-33
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	7e-32
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-31
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	9e-30
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-29
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-29
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-28
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-28
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	8e-28
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-27
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-27
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-27
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-27
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-26
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-26
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	5e-26
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	8e-26
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-25
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	8e-25
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	8e-25
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-24
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	9e-24
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-23
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-23
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-23
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-22
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-13

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (458), Expect = 7e-54
 Identities = 68/335 (20%), Positives = 117/335 (34%), Gaps = 45/335 (13%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDIGG 152
           + +S++G G  G V +        ++A K++        R   + E+ VL          
Sbjct: 9   EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSP--- 64

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V     F     I I  E + G SL   L+K      P  ++ ++   +++ + ++ 
Sbjct: 65  -YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLR 121

Query: 212 E-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           E  +++H D+KP NIL+                 +  G           IKL DFG +  
Sbjct: 122 EKHKIMHRDVKPSNILV-----------------NSRGE----------IKLCDFGVSGQ 154

Query: 271 EHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
                +   V TR Y +PE + G  ++   D+WS+G  LVE+  G       +  E   M
Sbjct: 155 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214

Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
               +         R           G     P                +LP+ +     
Sbjct: 215 FGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSL-- 272

Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
               +  D +   L  +PAER   ++ + H F  R
Sbjct: 273 ----EFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  168 bits (427), Expect = 3e-49
 Identities = 71/343 (20%), Positives = 134/343 (39%), Gaps = 82/343 (23%)

Query: 95  KILSKM-GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           K+ S++ G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++      
Sbjct: 14  KVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCP---- 65

Query: 154 RCVQIRNWFDY----RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
             V+I + ++     R  + IV E L G  L+  ++    ++F      E+ + + E++ 
Sbjct: 66  HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 125

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++H + + H D+KPEN+L  S     +                        +KL DFG  
Sbjct: 126 YLHSINIAHRDVKPENLLYTSKRPNAI------------------------LKLTDFGFA 161

Query: 269 TF--EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
                H   +    T +Y APEV+    ++  CD+WS+G I+  L  G   F ++  L  
Sbjct: 162 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 221

Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
              M+                                        R        PN    
Sbjct: 222 SPGMKT---------------------------------------RIRMGQYEFPNPEWS 242

Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
            V     ++  L++ LL+ +P +R+   E + HP+  +  + P
Sbjct: 243 EVSE---EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 282

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  167 bits (423), Expect = 5e-49
 Identities = 86/341 (25%), Positives = 143/341 (41%), Gaps = 56/341 (16%)

Query: 95  KILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD- 149
           + ++++GEG +G+V +  D +     VA+K VR          + + E+ VL+ L   + 
Sbjct: 10  ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 69

Query: 150 --IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
             +     V   +  D    + +VFE +   L  +L K      P + ++++  QLL  +
Sbjct: 70  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 129

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
            F+H  R++H DLKP+NIL+ S+  +K+ D                              
Sbjct: 130 DFLHSHRVVHRDLKPQNILVTSSGQIKLAD-------------------------FGLAR 164

Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                   + VV T  YRAPEV+L   +  P DLWSVGCI  E+   + LF+   +++ L
Sbjct: 165 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 224

Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
             +  V+G                        DWP       ++       +    I + 
Sbjct: 225 GKILDVIGLPGEE-------------------DWPRDV----ALPRQAFHSKSAQPIEKF 261

Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
           V        DLL   L ++PA+R+ A  AL HP+F +D+ R
Sbjct: 262 VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF-QDLER 301

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  168 bits (425), Expect = 8e-49
 Identities = 79/339 (23%), Positives = 137/339 (40%), Gaps = 46/339 (13%)

Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA 146
           ++ PR   LS +GEG +G V   +DN  K  VAIK +       Y +  + EI +L R  
Sbjct: 5   DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 64

Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             +I G   +      +    + +V   +G  LY  L+    +    D +     Q+L  
Sbjct: 65  HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRG 121

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + ++H   ++H DLKP N+LL +   +K+ D+     +  D  +                
Sbjct: 122 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH---------------- 165

Query: 267 STTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
                    +  V+TR YRAPE++L   G+    D+WSVGCIL E+ S   +F     L+
Sbjct: 166 -----TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 220

Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
            L  +  +LG                        D       +     +    +      
Sbjct: 221 QLNHILGILGSPSQE-------------------DLNCIINLKARNYLLSLPHKNKVPWN 261

Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
           +   ++    +DLL  +L ++P +R++  +AL HP+  +
Sbjct: 262 RLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 300

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  165 bits (419), Expect = 7e-48
 Identities = 94/364 (25%), Positives = 156/364 (42%), Gaps = 47/364 (12%)

Query: 86  IGENLTP-RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR 144
            GE     R  ++ K+G G F  V    D      VA+KIVR    Y EAA  EI +LQR
Sbjct: 6   KGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQR 65

Query: 145 LARHDIGGTRCVQIRN----------WFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
           +   D      +   +                H+ +VFE LG +L   ++K  +R  P+ 
Sbjct: 66  VNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 125

Query: 195 LVRELGRQLLESVAFMHELR-LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
            V+++ +QLL  + +MH    +IHTD+KPEN+L+   +                      
Sbjct: 126 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSP-------------------- 165

Query: 254 LPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313
                 IK+ D G+  +  + ++  + TR YR+PEV+LG  W    D+WS  C++ EL +
Sbjct: 166 -ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 224

Query: 314 GEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 367
           G+ LF+  E      + +H+A +  +LG LP +++         +  RG   +       
Sbjct: 225 GDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISK---- 280

Query: 368 RDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVR 427
                  W L  +     +     A ++ D L  +L+ DP +R  A   + HP+    + 
Sbjct: 281 ----LKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG 336

Query: 428 RPTL 431
              +
Sbjct: 337 MEEI 340

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (415), Expect = 9e-48
 Identities = 73/340 (21%), Positives = 141/340 (41%), Gaps = 46/340 (13%)

Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
           + + L+K+G+GTFG+V +    +  + VA+K V   N    +   A+ EI +LQ L   +
Sbjct: 11  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 70

Query: 150 IG---GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           +         +   +   +  I +VF+     L   L  N    F +  ++ + + LL  
Sbjct: 71  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG-LLSNVLVKFTLSEIKRVMQMLLNG 129

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + ++H  +++H D+K  N+L+     +K+ D+                      +     
Sbjct: 130 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGL-------------------ARAFSLA 170

Query: 267 STTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
             +  ++  + VV T  YR PE++LG   +  P DLW  GCI+ E+ +   + Q +    
Sbjct: 171 KNSQPNRYTNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH 229

Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
            LA++ ++ G +   +    D           +                    ++ + + 
Sbjct: 230 QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKR----------------KVKDRLK 273

Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
            +V       +DL+  LL  DPA+R+ + +AL H FF  D
Sbjct: 274 AYVRDP--YALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 311

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  164 bits (417), Expect = 1e-47
 Identities = 70/340 (20%), Positives = 124/340 (36%), Gaps = 81/340 (23%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGT 153
            IL ++G G FG V  C +     +   K + +     +     EI ++ +L  H     
Sbjct: 32  DILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHP---- 86

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
           + + + + F+ +  + ++ E L G  L+D +    Y+      V    RQ  E +  MHE
Sbjct: 87  KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMHE 145

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
             ++H D+KPENI+                             K+S++K+IDFG  T  +
Sbjct: 146 HSIVHLDIKPENIMC-------------------------ETKKASSVKIIDFGLATKLN 180

Query: 273 QDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
            D       +T  + APE++      +  D+W++G +   L SG + F   ++LE L  +
Sbjct: 181 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV 240

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
           +R                                                          
Sbjct: 241 KRCDWEFDEDAFSSVSP------------------------------------------- 257

Query: 391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
              +  D ++ LL+ +P +RL   +AL HP+   D    T
Sbjct: 258 ---EAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLT 294

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (413), Expect = 1e-47
 Identities = 91/340 (26%), Positives = 150/340 (44%), Gaps = 55/340 (16%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIG 151
           + + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I 
Sbjct: 5   QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI- 63

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF H
Sbjct: 64  ----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
             R++H DLKP+N+L+ +   +K+ D+                                 
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--------------------- 158

Query: 272 HQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
              +++ V T  YRAPE++LG   ++   D+WS+GCI  E+ +  ALF     ++ L  +
Sbjct: 159 ---YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
            R LG                       + WP   +  D   +  K  R      + V  
Sbjct: 216 FRTLGTPD-------------------EVVWPGVTSMPDYKPSFPKWARQD--FSKVVPP 254

Query: 391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPT 430
              D   LL  +L YDP +R+ A+ AL HPFF +DV +P 
Sbjct: 255 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF-QDVTKPV 293

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (411), Expect = 2e-47
 Identities = 71/344 (20%), Positives = 132/344 (38%), Gaps = 88/344 (25%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGT 153
           +I+ ++G+G FG+V +  + E   L A K++ + + +  E  M+EID+L      +I   
Sbjct: 15  EIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI--- 71

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ + F Y N++ I+ E       D +     R      ++ + +Q L+++ ++H+ 
Sbjct: 72  --VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 129

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           ++IH DLK  NIL                  + DG           IKL DFG +    +
Sbjct: 130 KIIHRDLKAGNILF-----------------TLDGD----------IKLADFGVSAKNTR 162

Query: 274 DHSY---VVSTRHYRAPEVILGL-----GWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
                   + T ++ APEV++        ++Y  D+WS+G  L+E+   E          
Sbjct: 163 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH------ 216

Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
                                                      + MR + K+ +     +
Sbjct: 217 -----------------------------------------ELNPMRVLLKIAKSEPPTL 235

Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
                 + +  D L+  L  +   R    + L+HPF T D  +P
Sbjct: 236 AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 279

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (408), Expect = 3e-47
 Identities = 68/337 (20%), Positives = 120/337 (35%), Gaps = 90/337 (26%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDI 150
           +I   +G+G FG V    + + K ++A+K++                E+++   L   +I
Sbjct: 9   EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 68

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                +++  +F     + ++ E     ++Y  L+K     F          +L  ++++
Sbjct: 69  -----LRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSY 121

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 268
            H  R+IH D+KPEN+LL SA  +K                           + DFG S 
Sbjct: 122 CHSKRVIHRDIKPENLLLGSAGELK---------------------------IADFGWSV 154

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
                  + +  T  Y  PE+I G   +   DLWS+G +  E   G+  F+ +   E   
Sbjct: 155 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 214

Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            + RV    P                                                  
Sbjct: 215 RISRVEFTFP-------------------------------------------------- 224

Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
           D       DL+  LL+++P++R   RE L HP+ T +
Sbjct: 225 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 261

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  162 bits (410), Expect = 1e-46
 Identities = 75/337 (22%), Positives = 116/337 (34%), Gaps = 81/337 (24%)

Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIG 151
              I  ++G G FG V    +       A K V + +   +E    EI  +  L RH   
Sbjct: 27  HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHP-- 83

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               V + + F+  N + +++E + G  L++ +    +     D   E  RQ+ + +  M
Sbjct: 84  --TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHM 140

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           HE   +H DLKPENI+  +                          +S+ +KLIDFG T  
Sbjct: 141 HENNYVHLDLKPENIMFTT-------------------------KRSNELKLIDFGLTAH 175

Query: 271 --EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
               Q       T  + APEV  G    Y  D+WSVG +   L SG + F    + E L 
Sbjct: 176 LDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR 235

Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            ++     +                                                   
Sbjct: 236 NVKSCDWNMDDSAFSGISE----------------------------------------- 254

Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
                D  D ++ LL  DP  R+   +AL HP+ T  
Sbjct: 255 -----DGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 286

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (400), Expect = 2e-45
 Identities = 58/345 (16%), Positives = 115/345 (33%), Gaps = 80/345 (23%)

Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
           + L  +  I   +G G FG V  C +   K+    K V+     +     EI +L     
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH 60

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
            +I     + +   F+    + ++FE + G  +++ +  +++       +     Q+ E+
Sbjct: 61  RNI-----LHLHESFESMEELVMIFEFISGLDIFERINTSAFE-LNEREIVSYVHQVCEA 114

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG 266
           + F+H   + H D++PENI+  +     +                         K+I+FG
Sbjct: 115 LQFLHSHNIGHFDIRPENIIYQTRRSSTI-------------------------KIIEFG 149

Query: 267 STTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324
                    ++  + +   Y APEV      +   D+WS+G ++  L SG   F    N 
Sbjct: 150 QARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ 209

Query: 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLI 384
           + +  +                                                      
Sbjct: 210 QIIENIMNAEYTFDEEAFKEISI------------------------------------- 232

Query: 385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
                    + +D +  LL  +   R+ A EAL+HP+  + + R 
Sbjct: 233 ---------EAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERV 268

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  159 bits (402), Expect = 2e-45
 Identities = 82/344 (23%), Positives = 138/344 (40%), Gaps = 59/344 (17%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
                +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I   R
Sbjct: 23  TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVRLR 79

Query: 155 -CVQIRNWFDYRNHICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMH 211
                        ++ +V + +  ++Y   R    + ++ P+  V+    QL  S+A++H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF- 270
              + H D+KP+N+LL                           P ++ +KL DFGS    
Sbjct: 140 SFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDFGSAKQL 173

Query: 271 -EHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
              + +   + +R+YRAPE+I G   +    D+WS GC+L EL  G+ +F     ++ L 
Sbjct: 174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233

Query: 329 MMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            + +VLG P    +        E  F +     W      R                   
Sbjct: 234 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPP---------------- 277

Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
                 + I L   LL Y P  RL   EA  H FF  ++R P +
Sbjct: 278 ------EAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDPNV 314

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (397), Expect = 3e-45
 Identities = 85/341 (24%), Positives = 149/341 (43%), Gaps = 67/341 (19%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK------YREAAMIEIDVLQRLARHD 149
            L  +GEG F  V +  D    ++VAIK ++  ++          A+ EI +LQ L+  +
Sbjct: 2   KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPN 61

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     + + + F ++++I +VF+ +   L   ++ NS    P   ++      L+ + +
Sbjct: 62  I-----IGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTP-SHIKAYMLMTLQGLEY 115

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H+  ++H DLKP N+LL                  ++G           +KL DFG   
Sbjct: 116 LHQHWILHRDLKPNNLLL-----------------DENGV----------LKLADFGLAK 148

Query: 270 F---EHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE 325
                ++ +++ V TR YRAPE++ G   +    D+W+VGCIL EL           +L+
Sbjct: 149 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD 208

Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
            L  +   LG                         WPD      S+         P + +
Sbjct: 209 QLTRIFETLGTPTEE-------------------QWPDMC----SLPDYVTFKSFPGIPL 245

Query: 386 QHVDHSAG-DLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
            H+  +AG DL+DL+QGL  ++P  R+ A +AL+  +F+  
Sbjct: 246 HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 286

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  155 bits (394), Expect = 4e-45
 Identities = 78/349 (22%), Positives = 127/349 (36%), Gaps = 98/349 (28%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR----------SINKYREAAMIEIDVLQR 144
           +    +G G    V  C      +  A+KI+            + + REA + E+D+L++
Sbjct: 6   EPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRK 65

Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
           ++ H       +Q+++ ++      +VF+ +    L+D+L +    +      R++ R L
Sbjct: 66  VSGHP----NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRAL 119

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
           LE +  +H+L ++H DLKPENILL                   D +          IKL 
Sbjct: 120 LEVICALHKLNIVHRDLKPENILL-----------------DDDMN----------IKLT 152

Query: 264 DFGSTTFEHQDHSY--VVSTRHYRAPEVILG------LGWNYPCDLWSVGCILVELCSGE 315
           DFG +           V  T  Y APE+I         G+    D+WS G I+  L +G 
Sbjct: 153 DFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 212

Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
             F   + +  L M+                      F      D+ D            
Sbjct: 213 PPFWHRKQMLMLRMI----------------MSGNYQFGSPEWDDYSD------------ 244

Query: 376 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
                              + DL+   L   P +R  A EAL HPFF +
Sbjct: 245 ------------------TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  152 bits (384), Expect = 3e-43
 Identities = 74/344 (21%), Positives = 131/344 (38%), Gaps = 82/344 (23%)

Query: 87  GENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQR 144
            E++         +G G F +V+   D   ++LVAIK +   ++     +   EI VL +
Sbjct: 4   AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK 63

Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
           + +H       V + + ++   H+ ++ + + G  L+D + +  +  +       L  Q+
Sbjct: 64  I-KHP----NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQV 116

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
           L++V ++H+L ++H DLKPEN+L  S                        L + S I + 
Sbjct: 117 LDAVKYLHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMIS 152

Query: 264 DFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
           DFG +  E           T  Y APEV+    ++   D WS+G I   L  G   F   
Sbjct: 153 DFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 212

Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
            + +   + E++L             +AE  F      D  D                  
Sbjct: 213 NDAK---LFEQIL-------------KAEYEFDSPYWDDISD------------------ 238

Query: 382 NLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD 425
                          D ++ L+  DP +R    +AL+HP+   D
Sbjct: 239 ------------SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 270

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (381), Expect = 3e-43
 Identities = 59/338 (17%), Positives = 118/338 (34%), Gaps = 80/338 (23%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDIGG 152
            ++  +GEG +G+V    +   +E VA+KIV         E    EI + + L  H+   
Sbjct: 8   DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHE--- 63

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V+        N   +  E   G  L+D +  +     P    +    QL+  V ++H
Sbjct: 64  -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLH 120

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
            + + H D+KPEN+LL   + +K+ D+   +    +                        
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN----------------------R 158

Query: 272 HQDHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
            +  + +  T  Y APE++    ++  P D+WS G +L  + +GE               
Sbjct: 159 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL-------------- 204

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
                                           D  +      + WK  +      + +D 
Sbjct: 205 ------------------------------PWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 234

Query: 391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRR 428
                + LL  +L  +P+ R+   +  +  ++ + +++
Sbjct: 235 ---APLALLHKILVENPSARITIPDIKKDRWYNKPLKK 269

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (382), Expect = 4e-43
 Identities = 68/341 (19%), Positives = 124/341 (36%), Gaps = 81/341 (23%)

Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIG 151
           +     K+G+G  G V    D    + VAI+ +       +E  + EI V++   ++   
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNP-- 77

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               V   + +   + + +V E L G SL D + +          +  + R+ L+++ F+
Sbjct: 78  --NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCM---DEGQIAAVCRECLQALEFL 132

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H  ++IH D+K +NILL     VK+ D+ F ++ + + S                     
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-------------------- 172

Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
                S +V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  L ++
Sbjct: 173 ----RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
                P                      L  P+  ++                       
Sbjct: 229 ATNGTP---------------------ELQNPEKLSA----------------------- 244

Query: 391 SAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTL 431
                 D L   L  D  +R  A+E L+H F        +L
Sbjct: 245 ---IFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSL 282

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (385), Expect = 5e-43
 Identities = 74/335 (22%), Positives = 126/335 (37%), Gaps = 41/335 (12%)

Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
           R + L  +G G  G V   +D      VAIK +        + + A  E+ +++ +   +
Sbjct: 18  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77

Query: 150 IGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I         +   +    + +V E +  +L   ++         + +  L  Q+L  + 
Sbjct: 78  IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIK 133

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
            +H   +IH DLKP NI++ S   +K+ D                              T
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDCTLKILD-------------------------FGLART 168

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
                  +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + ++   
Sbjct: 169 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 228

Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
            +   LG      + +       Y     +                     L     +H 
Sbjct: 229 KVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK--------LFPDSLFPADSEHN 280

Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
              A    DLL  +L  DPA+R+   +AL+HP+  
Sbjct: 281 KLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  150 bits (380), Expect = 2e-42
 Identities = 68/336 (20%), Positives = 141/336 (41%), Gaps = 57/336 (16%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ K+G G + +V E  +    E V +KI++ + K +     EI +L+ L         
Sbjct: 38  QLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLRGGP----N 91

Query: 155 CVQIRNWF--DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
            + + +           +VFE +         +           +R    ++L+++ + H
Sbjct: 92  IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCH 146

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
            + ++H D+KP N+++                            +   ++LID+G   F 
Sbjct: 147 SMGIMHRDVKPHNVMIDH--------------------------EHRKLRLIDWGLAEFY 180

Query: 272 H--QDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGE-ALFQTHENLEHL 327
           H  Q+++  V++R+++ PE+++    ++Y  D+WS+GC+L  +   +   F  H+N + L
Sbjct: 181 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 240

Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
             + +VLG    +  I              + +        D +    +      +  ++
Sbjct: 241 VRIAKVLGTEDLYDYID-------------KYNIELDPRFNDILGRHSRKRWERFVHSEN 287

Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
               + + +D L  LLRYD   RL AREA+ HP+F 
Sbjct: 288 QHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 323

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  149 bits (378), Expect = 2e-42
 Identities = 70/352 (19%), Positives = 123/352 (34%), Gaps = 89/352 (25%)

Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQ 143
           ++       L ++G G+FG V    D    E+VAIK +       N+  +  + E+  LQ
Sbjct: 11  DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70

Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
           +L RH       +Q R  +   +   +V E    S  D L  +  +      +  +    
Sbjct: 71  KL-RHP----NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGA 124

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI 263
           L+ +A++H   +IH D+K  NILL                 S+ G           +KL 
Sbjct: 125 LQGLAYLHSHNMIHRDVKAGNILL-----------------SEPGL----------VKLG 157

Query: 264 DFGSTTFEHQDHSYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELCSGEALFQT 320
           DFGS +     +S+ V T ++ APEVIL +    ++   D+WS+G   +EL   +     
Sbjct: 158 DFGSASIMAPANSF-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216

Query: 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380
              +  L  + +   P                        W +                 
Sbjct: 217 MNAMSALYHIAQNESPALQSG------------------HWSE----------------- 241

Query: 381 PNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLL 432
                           + +   L+  P +R  +   L+H F  R+     ++
Sbjct: 242 -------------YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIM 280

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (377), Expect = 7e-42
 Identities = 80/354 (22%), Positives = 143/354 (40%), Gaps = 57/354 (16%)

Query: 78  KDGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KY 131
           + G Y   + +    +    + L  +G G +G V    D      VAIK +        +
Sbjct: 1   RSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELF 60

Query: 132 REAAMIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRS 190
            + A  E+ +L+ +   ++ G           D      +V   +G  L   ++      
Sbjct: 61  AKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH---EK 117

Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250
              D ++ L  Q+L+ + ++H   +IH DLKP N+ +                       
Sbjct: 118 LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV----------------------- 154

Query: 251 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILV 309
                +   +K++DFG       + +  V TR YRAPEVIL  + +    D+WSVGCI+ 
Sbjct: 155 ----NEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMA 210

Query: 310 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD 369
           E+ +G+ LF+  ++L+ L  + +V G  P   V R      K + +G     P+      
Sbjct: 211 EMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG----LPE------ 260

Query: 370 SMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                             + +++   ++LL+ +L  D  +R+ A EAL HP+F 
Sbjct: 261 ---------LEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 305

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (369), Expect = 8e-41
 Identities = 77/342 (22%), Positives = 145/342 (42%), Gaps = 56/342 (16%)

Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRL 145
            +  R + LS +G G +G V   FD +    VA+K +        + +    E+ +L+ +
Sbjct: 15  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74

Query: 146 ARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
              ++ G           +  N + +V   +G  L + ++    +    D V+ L  Q+L
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQIL 131

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLID 264
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLA---------------------------VNEDCELKILD 164

Query: 265 FGSTTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHEN 323
           FG       + +  V+TR YRAPE++L    +N   D+WSVGCI+ EL +G  LF   ++
Sbjct: 165 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224

Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
           ++ L ++ R++G     +                        +S  +   +  L ++P +
Sbjct: 225 IDQLKLILRLVGTPGAEL--------------------LKKISSESARNYIQSLTQMPKM 264

Query: 384 IMQHVDHSAG-DLIDLLQGLLRYDPAERLKAREALRHPFFTR 424
              +V   A    +DLL+ +L  D  +R+ A +AL H +F +
Sbjct: 265 NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (362), Expect = 3e-40
 Identities = 68/345 (19%), Positives = 125/345 (36%), Gaps = 86/345 (24%)

Query: 88  ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEID 140
           EN+        ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65

Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ + +H       + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 66  ILKEI-QHP----NVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 118

Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
            +Q+L  V ++H L++ H DLKPENI+L+                               
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLD-----------------------RNVPKPR 155

Query: 260 IKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 317
           IK+IDFG        + +  +  T  + APE++         D+WS+G I   L SG + 
Sbjct: 156 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215

Query: 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377
           F      E LA +  V                                            
Sbjct: 216 FLGDTKQETLANVSAVNYEFED-------------------------------------- 237

Query: 378 LRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
                   ++  +++    D ++ LL  DP +R+  +++L+HP+ 
Sbjct: 238 --------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (360), Expect = 3e-40
 Identities = 63/350 (18%), Positives = 130/350 (37%), Gaps = 93/350 (26%)

Query: 85  AIGENLTPR-CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEID 140
           A+G +   R  K   ++G G+F  V +  D E    VA   ++        R+    E +
Sbjct: 1   AVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAE 60

Query: 141 VLQRLARHDIGGTRCVQIRNWF----DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDL 195
           +L+ L +H       V+  + +      +  I +V E +   +L  +L++   +   I +
Sbjct: 61  MLKGL-QHP----NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKV 113

Query: 196 VRELGRQLLESVAFMHEL--RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253
           +R   RQ+L+ + F+H     +IH DLK +NI +                +   GS    
Sbjct: 114 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI----------------TGPTGS---- 153

Query: 254 LPKSSAIKLIDFGSTTFEHQDHSY-VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 312
                 +K+ D G  T +    +  V+ T  + APE+     ++   D+++ G  ++E+ 
Sbjct: 154 ------VKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMA 206

Query: 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372
           + E  +   +N   +                                            R
Sbjct: 207 TSEYPYSECQNAAQI-------------------------------------------YR 223

Query: 373 AVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
            V   ++  +        +  ++ ++++G +R +  ER   ++ L H FF
Sbjct: 224 RVTSGVKPASF----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 269

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  142 bits (359), Expect = 5e-40
 Identities = 81/335 (24%), Positives = 137/335 (40%), Gaps = 62/335 (18%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIG 151
             L K+GEGT+G V +  +N  +   A+K +R            + EI +L+ L   +I 
Sbjct: 5   HGLEKIGEGTYGVVYKAQNNYGET-FALKKIRLEKEDEGIPSTTIREISILKELKHSNI- 62

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               V++ +    +  + +VFE L   L   L             +    QLL  +A+ H
Sbjct: 63  ----VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCH 117

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
           + R++H DLKP+N+L+                 +++G           +K+ DFG     
Sbjct: 118 DRRVLHRDLKPQNLLI-----------------NREGE----------LKIADFGLARAF 150

Query: 272 HQD---HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
                 +++ + T  YRAP+V++G   ++   D+WSVGCI  E+ +G  LF      + L
Sbjct: 151 GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL 210

Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
             + R+LG                        +WP+                LP      
Sbjct: 211 MRIFRILGTPNSK-------------------NWPNVTELPKYDPNFTVYEPLP--WESF 249

Query: 388 VDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFF 422
           +       IDLL  +L+ DP +R+ A++AL H +F
Sbjct: 250 LKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (352), Expect = 7e-39
 Identities = 80/334 (23%), Positives = 136/334 (40%), Gaps = 56/334 (16%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIG 151
           + L K+GEGT+G V +  + E  E+VA+K VR  +       +A+ EI +L+ L   +I 
Sbjct: 5   EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI- 63

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               V++ +       + +VFE            +       ++V+    QLL+ + F H
Sbjct: 64  ----VRLHDVLHSDKKLTLVFEFCDQD-LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271
              ++H DLKP+N+L+     +K+ ++                                 
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV----------------------- 155

Query: 272 HQDHSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEA-LFQTHENLEHLAM 329
            + +S  V T  YR P+V+ G    +   D+WS GCI  EL +    LF  ++  + L  
Sbjct: 156 -RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR 214

Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
           + R+LG                         WP      D     + +      ++  V 
Sbjct: 215 IFRLLGTPTEE-------------------QWPSMTKLPDYKP--YPMYPATTSLVNVVP 253

Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFT 423
                  DLLQ LL+ +P +R+ A EAL+HP+F+
Sbjct: 254 KLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (348), Expect = 2e-38
 Identities = 61/343 (17%), Positives = 114/343 (33%), Gaps = 97/343 (28%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIG 151
           ++L  +G G++G+  +       +++  K +         ++  + E+++L+ L   +I 
Sbjct: 7   EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI- 65

Query: 152 GTRCVQIRNWFDYR--NHICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLES 206
               V+  +    R    + IV E   G  L   + K +   +    + V  +  QL  +
Sbjct: 66  ----VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 121

Query: 207 VAFMHEL-----RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
           +   H        ++H DLKP N+ L                     +          +K
Sbjct: 122 LKECHRRSDGGHTVLHRDLKPANVFL-----------------DGKQN----------VK 154

Query: 262 LIDFGSTTFEHQDHSY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
           L DFG     + D S+    V T +Y +PE +  + +N   D+WS+GC+L ELC+    F
Sbjct: 155 LGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 214

Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
                 E    +                       R G     P   +            
Sbjct: 215 TAFSQKELAGKI-----------------------REGKFRRIPYRYSD----------- 240

Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
                          +L +++  +L      R    E L +P 
Sbjct: 241 ---------------ELNEIITRMLNLKDYHRPSVEEILENPL 268

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (341), Expect = 4e-37
 Identities = 66/337 (19%), Positives = 112/337 (33%), Gaps = 92/337 (27%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHDI 150
            +   +G+G+FG+V      +  +  AIK ++     ++   E  M+E  VL     H  
Sbjct: 5   ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF 64

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                  +   F  + ++  V E L G  L   ++      F +        +++  + F
Sbjct: 65  ----LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQF 118

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H   +++ DLK +NIL                   KDG            K+ DFG   
Sbjct: 119 LHSKGIVYRDLKLDNIL-----------------LDKDGHI----------KIADFGMCK 151

Query: 270 F---EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
                    +    T  Y APE++LG  +N+  D WS G +L E+  G++ F   +  E 
Sbjct: 152 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 211

Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
              +                        R     +P                        
Sbjct: 212 FHSI------------------------RMDNPFYPRWLEK------------------- 228

Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLKAR-EALRHPFF 422
                  +  DLL  L   +P +RL  R +  +HP F
Sbjct: 229 -------EAKDLLVKLFVREPEKRLGVRGDIRQHPLF 258

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (338), Expect = 6e-37
 Identities = 67/339 (19%), Positives = 109/339 (32%), Gaps = 90/339 (26%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHDI 150
           K    +GEG+F  VV   +       AIKI+                E DV+ RL  H  
Sbjct: 11  KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP- 68

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                V++   F     +           L  ++RK    SF     R    +++ ++ +
Sbjct: 69  ---FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEY 123

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H   +IH DLKPENILL    ++++ D+      S +                      
Sbjct: 124 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--------------------- 162

Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
            +    +  V T  Y +PE++         DLW++GCI+ +L +G   F+          
Sbjct: 163 -KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK 221

Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
           + ++    P                      +P                           
Sbjct: 222 IIKLEYDFPEKF-------------------FP--------------------------- 235

Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREA------LRHPFF 422
                  DL++ LL  D  +RL   E         HPFF
Sbjct: 236 ----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 270

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  133 bits (336), Expect = 2e-36
 Identities = 58/335 (17%), Positives = 104/335 (31%), Gaps = 65/335 (19%)

Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           R ++  K+G G+FG +    D    E VAIK+   +        IE  + + +       
Sbjct: 8   RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLEC-VKTKHPQLHIESKIYKMMQGGVG-- 64

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
                IR      ++  +V E LGPSL D     S R F +  V  L  Q++  + ++H 
Sbjct: 65  --IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS 121

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
              IH D+KP+N L+   +   +           D    K    +              +
Sbjct: 122 KNFIHRDVKPDNFLMGLGKKGNLVYII-------DFGLAKKYRDAR-------THQHIPY 167

Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
           +++  +  T  Y +    LG+  +   DL S+G +L+    G   +Q  +        ER
Sbjct: 168 RENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYER 227

Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                                                         ++   I        
Sbjct: 228 ------------------------------------------ISEKKMSTPIEVLCKGYP 245

Query: 393 GDLIDLLQGLLRYDPAERLKA---REALRHPFFTR 424
            +    L         ++      R+  R+ F  +
Sbjct: 246 SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 280

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (334), Expect = 2e-36
 Identities = 65/344 (18%), Positives = 110/344 (31%), Gaps = 95/344 (27%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRLAR 147
           ++   +G G FG V           VAIK V                  +E+ +L++++ 
Sbjct: 7   QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
              G    +++ +WF+  +   ++ E+  P    F       +   +L R    Q+LE+V
Sbjct: 67  GFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG- 266
              H   ++H D+K ENIL+                                +KLIDFG 
Sbjct: 124 RHCHNCGVLHRDIKDENILIDL--------------------------NRGELKLIDFGS 157

Query: 267 STTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLE 325
               +   ++    TR Y  PE I           +WS+G +L ++  G+  F+  E   
Sbjct: 158 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-- 215

Query: 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM 385
                                                              ++R      
Sbjct: 216 ---------------------------------------------------IIRGQVFFR 224

Query: 386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRP 429
           Q V      LI   +  L   P++R    E   HP+  +DV  P
Sbjct: 225 QRVSSECQHLI---RWCLALRPSDRPTFEEIQNHPWM-QDVLLP 264

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  129 bits (325), Expect = 5e-35
 Identities = 52/252 (20%), Positives = 91/252 (36%), Gaps = 38/252 (15%)

Query: 93  RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
             K+  ++GEG+FG + E  +    + VAIK              E    + LA      
Sbjct: 6   HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPR-RSDAPQLRDEYRTYKLLAGCTG-- 62

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
                +  +     H  +V + LGPSL D L     R F +  V    +Q+L  V  +HE
Sbjct: 63  --IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHE 119

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG------ 266
             L++ D+KP+N L+                             ++ I ++DFG      
Sbjct: 120 KSLVYRDIKPDNFLIGRPNS----------------------KNANMIYVVDFGMVKFYR 157

Query: 267 ----STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322
                    +++   +  T  Y +    LG   +   DL ++G + +    G   +Q  +
Sbjct: 158 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 217

Query: 323 NLEHLAMMERVL 334
              +    ER+ 
Sbjct: 218 AATNKQKYERIG 229

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  129 bits (326), Expect = 1e-34
 Identities = 67/340 (19%), Positives = 123/340 (36%), Gaps = 90/340 (26%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHDI 150
            +   +G G FG+V  C   +  ++ A+K +      + +    A+ E  +L  ++  D 
Sbjct: 7   SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC 66

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                V +   F   + +  + + + G  L+  L ++    F    +R    +++  +  
Sbjct: 67  --PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEH 122

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFG-ST 268
           MH   +++ DLKP NILL    +V                           ++ D G + 
Sbjct: 123 MHNRFVVYRDLKPANILLDEHGHV---------------------------RISDLGLAC 155

Query: 269 TFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327
            F  +     V T  Y APEV+  G+ ++   D +S+GC+L +L  G + F+ H+  +  
Sbjct: 156 DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH 215

Query: 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQH 387
            +    L                        ++ PD  +                     
Sbjct: 216 EIDRMTLTM---------------------AVELPDSFSP-------------------- 234

Query: 388 VDHSAGDLIDLLQGLLRYDPAERLK-----AREALRHPFF 422
                 +L  LL+GLL+ D   RL      A+E    PFF
Sbjct: 235 ------ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 268

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (319), Expect = 2e-34
 Identities = 57/327 (17%), Positives = 110/327 (33%), Gaps = 85/327 (25%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K+L  +G+G FG V+      +   VA+K +++ +   +A + E  V+ +L   ++    
Sbjct: 10  KLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNL---- 62

Query: 155 CVQIRNWF-DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            VQ+     + +  + IV E +   SL D+LR         D + +    + E++ ++  
Sbjct: 63  -VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 121

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272
              +H DL   N+L+                 S+D             K+ DFG T    
Sbjct: 122 NNFVHRDLAARNVLV-----------------SEDNV----------AKVSDFGLTKEAS 154

Query: 273 QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332
                      + APE +    ++   D+WS G +L E+ S   +      L+ +     
Sbjct: 155 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV---- 210

Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                                 +G ++D PDG                            
Sbjct: 211 ------------------PRVEKGYKMDAPDGCPP------------------------- 227

Query: 393 GDLIDLLQGLLRYDPAERLKAREALRH 419
             + ++++     D A R    +    
Sbjct: 228 -AVYEVMKNCWHLDAAMRPSFLQLREQ 253

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  126 bits (318), Expect = 9e-34
 Identities = 69/337 (20%), Positives = 118/337 (35%), Gaps = 92/337 (27%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHDI 150
           +IL  +G G+FG+V            A+K+++       K  E    E  +L  +    I
Sbjct: 7   QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFI 66

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                +++   F     I ++ + +       L + S R FP  + +    ++  ++ ++
Sbjct: 67  -----IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEYL 120

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H   +I+ DLKPENILL                  K+G           IK+ DFG   +
Sbjct: 121 HSKDIIYRDLKPENILL-----------------DKNGH----------IKITDFGFAKY 153

Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
                  +  T  Y APEV+    +N   D WS G ++ E+ +G   F     ++     
Sbjct: 154 VPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK---TY 210

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
           E++L                      A L +P                            
Sbjct: 211 EKIL---------------------NAELRFPPFFNE----------------------- 226

Query: 391 SAGDLIDLLQGLLRYDPAERLK-----AREALRHPFF 422
              D+ DLL  L+  D ++RL        +   HP+F
Sbjct: 227 ---DVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 260

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (315), Expect = 3e-33
 Identities = 68/341 (19%), Positives = 117/341 (34%), Gaps = 97/341 (28%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHDI 150
             L  +G+GTFG+V+   +       A+KI+R             + E  VLQ      +
Sbjct: 8   DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67

Query: 151 GGTRCVQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                  ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ ++ +
Sbjct: 68  -----TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEY 120

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +H   +++ D+K EN++L                  KDG           IK+ DFG   
Sbjct: 121 LHSRDVVYRDIKLENLML-----------------DKDGH----------IKITDFGLCK 153

Query: 270 FEHQDHS---YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326
               D +       T  Y APEV+    +    D W +G ++ E+  G   F   ++   
Sbjct: 154 EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL 213

Query: 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQ 386
             ++                            + +P   +                    
Sbjct: 214 FELILM------------------------EEIRFPRTLSP------------------- 230

Query: 387 HVDHSAGDLIDLLQGLLRYDPAERLK-----AREALRHPFF 422
                  +   LL GLL+ DP +RL      A+E + H FF
Sbjct: 231 -------EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  122 bits (306), Expect = 7e-32
 Identities = 65/337 (19%), Positives = 112/337 (33%), Gaps = 92/337 (27%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHDI 150
             +  +G G+FG+V+     E     A+KI+        K  E  + E  +LQ +    +
Sbjct: 44  DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                    ++ D  N   ++    G  ++  LR+     F     R    Q++ +  ++
Sbjct: 104 ----VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYL 157

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H L LI+ DLKPEN+L+                  + G           I++ DFG    
Sbjct: 158 HSLDLIYRDLKPENLLI-----------------DQQGY----------IQVTDFGFAKR 190

Query: 271 EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330
                  +  T    APE+IL  G+N   D W++G ++ E+ +G   F   + ++    +
Sbjct: 191 VKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250

Query: 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDH 390
                  P H                      D                           
Sbjct: 251 VSGKVRFPSHF-------------------SSD--------------------------- 264

Query: 391 SAGDLIDLLQGLLRYDPAERLK-----AREALRHPFF 422
               L DLL+ LL+ D  +R         +   H +F
Sbjct: 265 ----LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (295), Expect = 5e-31
 Identities = 66/332 (19%), Positives = 119/332 (35%), Gaps = 81/332 (24%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           K++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L +H     R
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQL-QHQ----R 69

Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V++      +  I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 70  LVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL+  NIL+      K+ D+  L+R  +D  Y                       
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFG-LARLIEDNEYTA--------------------- 166

Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 333
                     + APE I    +    D+WS G +L E+ +   +         +      
Sbjct: 167 -REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI----- 220

Query: 334 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 393
                            +   RG R+  PD                              
Sbjct: 221 -----------------QNLERGYRMVRPDNCPE-------------------------- 237

Query: 394 DLIDLLQGLLRYDPAERLKAREALR--HPFFT 423
           +L  L++   +  P +R            FFT
Sbjct: 238 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (287), Expect = 9e-30
 Identities = 58/337 (17%), Positives = 114/337 (33%), Gaps = 93/337 (27%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIG 151
            +  ++G G+FG V +   +     VA+K++       +  +A   E+ VL++    +I 
Sbjct: 11  TVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI- 66

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               +    +      + IV +   G SLY  L     + F +  + ++ RQ  + + ++
Sbjct: 67  ----LLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMDYL 120

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270
           H   +IH DLK  NI L                  +D +          +K+ DFG  T 
Sbjct: 121 HAKSIIHRDLKSNNIFL-----------------HEDLT----------VKIGDFGLATV 153

Query: 271 EHQDHSY-----VVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHE 322
           + +         +  +  + APEVI     N   +  D+++ G +L EL +G+  +    
Sbjct: 154 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY---- 209

Query: 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
                                                       +RD +  +     L  
Sbjct: 210 ----------------------------------------SNINNRDQIIFMVGRGYLSP 229

Query: 383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH 419
            + +   +    +  L+   L+    ER    + L  
Sbjct: 230 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  114 bits (286), Expect = 1e-29
 Identities = 58/342 (16%), Positives = 104/342 (30%), Gaps = 83/342 (24%)

Query: 89  NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQR 144
           +L+ R ++   +G G   +V    D      VA+K++R        +      E      
Sbjct: 4   HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 63

Query: 145 LARHDIGGTRCVQIRNWFDYRNH----ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           L    I     V + +  +          IV E + G +L D +              E+
Sbjct: 64  LNHPAI-----VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEV 116

Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259
                +++ F H+  +IH D+KP NI++ +   VKV D+      +  G+          
Sbjct: 117 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS--------- 167

Query: 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319
                           + V+ T  Y +PE   G   +   D++S+GC+L E+ +GE  F 
Sbjct: 168 ------------VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 215

Query: 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379
               +                 V     R +                             
Sbjct: 216 GDSPVS----------------VAYQHVREDPIPPSARHEGLSA---------------- 243

Query: 380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPF 421
                         DL  ++   L  +P  R +    +R   
Sbjct: 244 --------------DLDAVVLKALAKNPENRYQTAAEMRADL 271

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (284), Expect = 3e-29
 Identities = 63/331 (19%), Positives = 109/331 (32%), Gaps = 79/331 (23%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++  K+G+G FG+V     N     VAIK ++      EA + E  V+++L    +    
Sbjct: 20  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL---- 74

Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
            VQ+           +       SL DFL+  + +   +  + ++  Q+   +A++  + 
Sbjct: 75  -VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN 133

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
            +H DL+  NIL+      KV D+  L+R  +D  Y                        
Sbjct: 134 YVHRDLRAANILVGENLVCKVADFG-LARLIEDNEYTA---------------------- 170

Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 334
                    + APE  L   +    D+WS G +L EL +   +         +  +++V 
Sbjct: 171 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--LDQV- 227

Query: 335 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 394
                               RG R+  P                                
Sbjct: 228 -------------------ERGYRMPCPPECPE--------------------------S 242

Query: 395 LIDLLQGLLRYDPAERLKAREALR--HPFFT 423
           L DL+    R +P ER            +FT
Sbjct: 243 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 273

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (278), Expect = 4e-28
 Identities = 54/355 (15%), Positives = 106/355 (29%), Gaps = 104/355 (29%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKEL-----VAIKIVR--SINKYREAAMIEIDVLQRLAR 147
           +    +G G FG+V+        +      VA+K+++  + +  REA M E+ ++ +L  
Sbjct: 40  EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 99

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYR----------------- 189
           H+      V +         I ++FE      L ++LR    +                 
Sbjct: 100 HE----NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 155

Query: 190 ----SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245
                   + +     Q+ + + F+     +H DL   N+L+   + VK+ D+       
Sbjct: 156 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 215

Query: 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305
            D +Y                                 + APE +    +    D+WS G
Sbjct: 216 SDSNYVV----------------------RGNARLPVKWMAPESLFEGIYTIKSDVWSYG 253

Query: 306 CILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDG 364
            +L E+ S G   +       +                        K  + G ++D P  
Sbjct: 254 ILLWEIFSLGVNPYPGIPVDANF----------------------YKLIQNGFKMDQPFY 291

Query: 365 ATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH 419
           AT                           ++  ++Q    +D  +R         
Sbjct: 292 ATE--------------------------EIYIIMQSCWAFDSRKRPSFPNLTSF 320

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (275), Expect = 4e-28
 Identities = 61/333 (18%), Positives = 122/333 (36%), Gaps = 86/333 (25%)

Query: 99  KMGEGTFGQVVECFDNEKK--ELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           ++G G FG V + +   KK  + VA+KI++   +    ++  + E +V+Q+L  +     
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNP---- 68

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++    +  + + ++       L  +L++N  R      + EL  Q+   + ++ E 
Sbjct: 69  YIVRMIGICEAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES 126

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             +H DL   N+LLV+  Y K+ D+  LS+                       +    ++
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDF-GLSK--------------------ALRADENYYK 165

Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE-LCSGEALFQTHENLEHLAMMER 332
             ++      + APE I    ++   D+WS G ++ E    G+  ++  +  E  AM+E 
Sbjct: 166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE- 224

Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                                 +G R+  P G                            
Sbjct: 225 ----------------------KGERMGCPAGCPR------------------------- 237

Query: 393 GDLIDLLQGLLRYDPAERLKARE---ALRHPFF 422
            ++ DL+     YD   R         LR+ ++
Sbjct: 238 -EMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 269

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (272), Expect = 8e-28
 Identities = 55/325 (16%), Positives = 105/325 (32%), Gaps = 77/325 (23%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
             + ++G G FG V   +    K+ VAIK +R      E  + E +V+ +L  H     +
Sbjct: 8   TFVQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHP----K 61

Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
            VQ+      +  IC+VFE +         +     F  + +  +   + E +A++ E  
Sbjct: 62  LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 121

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
           +IH DL   N L+   + +KV D+        D                       ++  
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-----------------------QYTS 158

Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVL 334
            +       + +PEV     ++   D+WS G ++ E+ S   +   + +   +       
Sbjct: 159 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED---- 214

Query: 335 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD 394
                                G RL  P  A++                           
Sbjct: 215 ------------------ISTGFRLYKPRLAST--------------------------H 230

Query: 395 LIDLLQGLLRYDPAERLKAREALRH 419
           +  ++    +  P +R      LR 
Sbjct: 231 VYQIMNHCWKERPEDRPAFSRLLRQ 255

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 3e-27
 Identities = 57/344 (16%), Positives = 104/344 (30%), Gaps = 96/344 (27%)

Query: 95  KILSKMGEGTFGQVVECFDNE--KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDI 150
           K    +GEG FGQV++    +   +   AIK ++             E++VL +L  H  
Sbjct: 13  KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP- 71

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSY--------------RSFPIDL 195
                + +    ++R ++ +  E     +L DFLRK+                 +     
Sbjct: 72  ---NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 128

Query: 196 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 255
           +      +   + ++ + + IH DL   NIL+      K+ D+  LSR  +         
Sbjct: 129 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADF-GLSRGQEV-------- 179

Query: 256 KSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315
                           +   +       + A E +    +    D+WS G +L E+ S  
Sbjct: 180 ----------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 223

Query: 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375
                      L                       +   +G RL+ P             
Sbjct: 224 GTPYCGMTCAELY----------------------EKLPQGYRLEKPLNCDD-------- 253

Query: 376 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH 419
                             ++ DL++   R  P ER    + L  
Sbjct: 254 ------------------EVYDLMRQCWREKPYERPSFAQILVS 279

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  107 bits (269), Expect = 3e-27
 Identities = 49/329 (14%), Positives = 113/329 (34%), Gaps = 85/329 (25%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
            +  K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++    
Sbjct: 20  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL---- 75

Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+           I+ E +   +L D+LR+ + +     ++  +  Q+  ++ ++ + 
Sbjct: 76  -VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 134

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             IH DL   N L+                  ++            +K+ DFG +     
Sbjct: 135 NFIHRDLAARNCLV-----------------GENHL----------VKVADFGLSRLMTG 167

Query: 274 D----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
           D    H+       + APE +    ++   D+W+ G +L E+ +         +L  +  
Sbjct: 168 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 227

Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
           +                        +  R++ P+G                         
Sbjct: 228 L----------------------LEKDYRMERPEGCPE---------------------- 243

Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALR 418
                + +L++   +++P++R    E  +
Sbjct: 244 ----KVYELMRACWQWNPSDRPSFAEIHQ 268

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 3e-27
 Identities = 61/348 (17%), Positives = 109/348 (31%), Gaps = 97/348 (27%)

Query: 95  KILSKMGEGTFGQVVEC-----FDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLAR 147
                +G G FG+VVE        ++    VA+K+++  +    REA M E+ VL  L  
Sbjct: 26  SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRK----------------NSYRS 190
           H       V +           ++ E      L +FLR+                +   +
Sbjct: 86  HM----NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141

Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250
             ++ +     Q+ + +AF+     IH DL   NILL      K+ D+        D +Y
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201

Query: 251 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 310
                                            + APE I    + +  D+WS G  L E
Sbjct: 202 VV----------------------KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 239

Query: 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 370
           L S  +       ++                         K  + G R+  P+ A +   
Sbjct: 240 LFSLGSSPYPGMPVDSKFY---------------------KMIKEGFRMLSPEHAPA--- 275

Query: 371 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
                                  ++ D+++     DP +R   ++ ++
Sbjct: 276 -----------------------EMYDIMKTCWDADPLKRPTFKQIVQ 300

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (267), Expect = 6e-27
 Identities = 64/334 (19%), Positives = 113/334 (33%), Gaps = 86/334 (25%)

Query: 99  KMGEGTFGQVVECFDNEKKE--LVAIKIVR--SINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++G G FG V +     +K+   VAIK+++  +     E  M E  ++ +L    I    
Sbjct: 16  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI---- 71

Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V++         + +V E   G  L+ FL        P+  V EL  Q+   + ++ E 
Sbjct: 72  -VRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK 128

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
             +H DL   N+LLV+  Y K+ D+        D SY                     + 
Sbjct: 129 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY---------------------YT 167

Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE-LCSGEALFQTHENLEHLAMMER 332
             S       + APE I    ++   D+WS G  + E L  G+  ++  +  E +A +E 
Sbjct: 168 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE- 226

Query: 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSA 392
                                 +G R++ P                              
Sbjct: 227 ----------------------QGKRMECPPECPP------------------------- 239

Query: 393 GDLIDLLQGLLRYDPAERLKARE---ALRHPFFT 423
            +L  L+     Y   +R         +R  +++
Sbjct: 240 -ELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 272

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 1e-26
 Identities = 56/335 (16%), Positives = 106/335 (31%), Gaps = 63/335 (18%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
           +   +G+G FG+V       + E VA+KI  S  +       EI     L   +I G   
Sbjct: 7   LQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIA 64

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSY-----RSFPIDLVRELGRQLLESVAF 209
              ++   +   + +V +     SL+D+L + +          +     L    +E V  
Sbjct: 65  ADNKDNGTW-TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 123

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
             +  + H DLK +NIL+       + D     R           P              
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH------------ 171

Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYP------CDLWSVGCILVELCSGEALFQTHEN 323
                    V T+ Y APEV+               D++++G +  E+    ++   HE+
Sbjct: 172 --------RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 223

Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
            +          P    M        +    +  R + P+   S +++R           
Sbjct: 224 YQLPYYDLVPSDPSVEEM-------RKVVCEQKLRPNIPNRWQSCEALR----------- 265

Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
                      +  +++     + A RL A    +
Sbjct: 266 ----------VMAKIMRECWYANGAARLTALRIKK 290

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  105 bits (262), Expect = 4e-26
 Identities = 53/294 (18%), Positives = 107/294 (36%), Gaps = 33/294 (11%)

Query: 95  KILSKMGEGTFGQVVECFD---NEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHD 149
           KI   +G G FG+V         +++  VAIK ++S    K R   + E  ++ +    +
Sbjct: 29  KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 88

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           +     + +         + I+ E +     D   + +   F +  +  + R +   + +
Sbjct: 89  V-----IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKY 143

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           + ++  +H DL   NIL+ S    KV D+  LSR  +D +       +   K+       
Sbjct: 144 LADMNYVHRDLAARNILVNSNLVCKVSDFG-LSRFLEDDTSDPTYTSALGGKI------- 195

Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA 328
                         + APE I    +    D+WS G ++ E+ S GE  +    N +   
Sbjct: 196 -----------PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD--- 241

Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN 382
           ++  +         +       +      + D          +  + K++R PN
Sbjct: 242 VINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPN 295

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 5e-26
 Identities = 63/344 (18%), Positives = 121/344 (35%), Gaps = 91/344 (26%)

Query: 95  KILSKMGEGTFGQV---VECFDNEKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLA 146
           ++L  +G G +G+V    +   ++  +L A+K+++        K  E    E  VL+ + 
Sbjct: 27  ELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR 86

Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +        V +   F     + ++ +   G  L+  L +     F    V+    +++ 
Sbjct: 87  QSPF----LVTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVL 140

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDF 265
           ++  +H+L +I+ D+K ENILL S  +V + D+                    + + +  
Sbjct: 141 ALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGL------------------SKEFVAD 182

Query: 266 GSTTFEHQDHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHEN 323
            +        +       Y AP+++ G   G +   D WS+G ++ EL +G + F     
Sbjct: 183 ETERAYDFCGTI-----EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE 237

Query: 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNL 383
               A + R +                          +P   ++                
Sbjct: 238 KNSQAEISRRILKSE--------------------PPYPQEMSA---------------- 261

Query: 384 IMQHVDHSAGDLIDLLQGLLRYDPAERLK-----AREALRHPFF 422
                        DL+Q LL  DP +RL      A E   H FF
Sbjct: 262 ----------LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 295

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (257), Expect = 8e-26
 Identities = 54/326 (16%), Positives = 106/326 (32%), Gaps = 79/326 (24%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
             L ++G G FG V       + + VAIK+++  +   +  + E  V+  L+   +    
Sbjct: 7   TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKL---- 61

Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
            VQ+      +  I I+ E +         +     F    + E+ + + E++ ++   +
Sbjct: 62  -VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 120

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274
            +H DL   N L+     VKV D+  LSR   D  Y  +                     
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFG-LSRYVLDDEYTSS--------------------- 158

Query: 275 HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERV 333
                    +  PEV++   ++   D+W+ G ++ E+ S G+  ++   N E    +   
Sbjct: 159 -VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI--- 214

Query: 334 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 393
                                +G RL  P  A+                           
Sbjct: 215 --------------------AQGLRLYRPHLASE-------------------------- 228

Query: 394 DLIDLLQGLLRYDPAERLKAREALRH 419
            +  ++         ER   +  L +
Sbjct: 229 KVYTIMYSCWHEKADERPTFKILLSN 254

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (254), Expect = 4e-25
 Identities = 51/308 (16%), Positives = 104/308 (33%), Gaps = 35/308 (11%)

Query: 89  NLTPRCKILSKM-GEGTFGQVVECF----DNEKKELVAIKIVR--SINKYREAAMIEIDV 141
            + P C    K+ G G FG+V +        +K+  VAIK ++     K R   + E  +
Sbjct: 3   EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 62

Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGR 201
           + + + H+I     +++         + I+ E +     D   +     F +  +  + R
Sbjct: 63  MGQFSHHNI-----IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR 117

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261
            +   + ++  +  +H DL   NIL+ S    KV D+        D              
Sbjct: 118 GIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT------- 170

Query: 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321
                         S       + APE I    +    D+WS G ++ E+ +        
Sbjct: 171 --------------SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE 216

Query: 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381
            +   +  M+ +         +       +   +  + +        D +  + KL+R P
Sbjct: 217 LSNHEV--MKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 274

Query: 382 NLIMQHVD 389
           + +    D
Sbjct: 275 DSLKTLAD 282

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (251), Expect = 8e-25
 Identities = 57/330 (17%), Positives = 98/330 (29%), Gaps = 82/330 (24%)

Query: 95  KILSKMGEGTFGQVVECFD---NEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHD 149
           ++   +GEG FG V +            VAIK  ++   +  RE  + E   +++   H 
Sbjct: 10  ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHP 68

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                 V++       N + I+ E           +    S  +  +     QL  ++A+
Sbjct: 69  ----HIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 123

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTT 269
           +   R +H D+   N+L+ S + VK+ D+  LSR  +D +Y+K                 
Sbjct: 124 LESKRFVHRDIAARNVLVSSNDCVKLGDF-GLSRYMEDSTYYK----------------- 165

Query: 270 FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329
                 S       + APE I    +    D+W  G  + E+               +  
Sbjct: 166 -----ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 220

Query: 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD 389
                                     G RL  P                           
Sbjct: 221 R----------------------IENGERLPMPPNCPP---------------------- 236

Query: 390 HSAGDLIDLLQGLLRYDPAERLKAREALRH 419
                L  L+     YDP+ R +  E    
Sbjct: 237 ----TLYSLMTKCWAYDPSRRPRFTELKAQ 262

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 8e-25
 Identities = 48/326 (14%), Positives = 91/326 (27%), Gaps = 77/326 (23%)

Query: 99  KMGEGTFGQVVECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT 153
            +G G FG V        + KK   A+K +  I         + E  +++  +  ++   
Sbjct: 34  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV--- 90

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
               +           +V   +         +N   +  +  +   G Q+ + + F+   
Sbjct: 91  -LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 149

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
           + +H DL   N +L     VKV D+  L+R   D  +     K+                
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADF-GLARDMYDKEFDSVHNKTG--------------- 193

Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 333
                     + A E +    +    D+WS G +L EL +  A      N   +      
Sbjct: 194 ----AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT----- 244

Query: 334 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG 393
                             Y  +G RL  P                          ++   
Sbjct: 245 -----------------VYLLQGRRLLQP--------------------------EYCPD 261

Query: 394 DLIDLLQGLLRYDPAERLKAREALRH 419
            L +++          R    E +  
Sbjct: 262 PLYEVMLKCWHPKAEMRPSFSELVSR 287

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  100 bits (250), Expect = 2e-24
 Identities = 57/354 (16%), Positives = 104/354 (29%), Gaps = 105/354 (29%)

Query: 95  KILSKMGEGTFGQVVEC-----FDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLAR 147
           + +  +GEG FG+V +         E   +VA+K+++  +    +     E  ++     
Sbjct: 16  EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN 75

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRS---------------- 190
                   V++         +C++FE +    L +FLR  S  +                
Sbjct: 76  P-----NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 130

Query: 191 ------FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244
                         + RQ+   +A++ E + +H DL   N L+     VK+ D+  LSR+
Sbjct: 131 SPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADF-GLSRN 189

Query: 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSV 304
                Y+K                               +  PE I    +    D+W+ 
Sbjct: 190 IYSADYYKA---------------------DGNDAIPIRWMPPESIFYNRYTTESDVWAY 228

Query: 305 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDG 364
           G +L E+ S           E +                          R G  L  P+ 
Sbjct: 229 GVVLWEIFSYGLQPYYGMAHEEVIYY----------------------VRDGNILACPEN 266

Query: 365 ATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR 418
                                        +L +L++      PA+R       R
Sbjct: 267 CPL--------------------------ELYNLMRLCWSKLPADRPSFCSIHR 294

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.4 bits (244), Expect = 9e-24
 Identities = 49/349 (14%), Positives = 107/349 (30%), Gaps = 98/349 (28%)

Query: 95  KILSKMGEGTFGQVVECFD-------NEKKELVAIKIVR--SINKYREAAMIEIDVLQRL 145
            +   +GEG FGQVV             +   VA+K+++  +  K     + E+++++ +
Sbjct: 16  VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 75

Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR--------------KNSYRS 190
            +H       + +         + ++ E     +L ++L+               N    
Sbjct: 76  GKHKN----IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 131

Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250
                +     Q+   + ++   + IH DL   N+L+     +K+ D+           Y
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191

Query: 251 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 310
            K                       +       + APE +    + +  D+WS G +L E
Sbjct: 192 KK----------------------TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE 229

Query: 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS 370
           + +          +E L                       K  + G R+D P   T+   
Sbjct: 230 IFTLGGSPYPGVPVEELF----------------------KLLKEGHRMDKPSNCTN--- 264

Query: 371 MRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH 419
                                  +L  +++      P++R   ++ +  
Sbjct: 265 -----------------------ELYMMMRDCWHAVPSQRPTFKQLVED 290

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.0 bits (243), Expect = 2e-23
 Identities = 53/350 (15%), Positives = 109/350 (31%), Gaps = 97/350 (27%)

Query: 95  KILSKMGEGTFGQVVECFD-----NEKKELVAIKIVR--SINKYREAAMIEIDVLQRLAR 147
            +  ++G+G+FG V E        +E +  VAIK V   +  + R   + E  V++    
Sbjct: 23  TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC 82

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKN--------SYRSFPIDLVRE 198
           H +     V++           ++ E +    L  +LR                +  + +
Sbjct: 83  HHV-----VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 137

Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSS 258
           +  ++ + +A+++  + +H DL   N ++     VK+ D+       +   Y K      
Sbjct: 138 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK------ 191

Query: 259 AIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318
                               +    + +PE +    +    D+WS G +L E+ +     
Sbjct: 192 ----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 235

Query: 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378
               + E +                       ++   G  LD PD               
Sbjct: 236 YQGLSNEQVL----------------------RFVMEGGLLDKPDNCPD----------- 262

Query: 379 RLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR------HPFF 422
                           L +L++   +Y+P  R    E +        P F
Sbjct: 263 ---------------MLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 297

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.7 bits (240), Expect = 3e-23
 Identities = 42/252 (16%), Positives = 95/252 (37%), Gaps = 35/252 (13%)

Query: 95  KILSKMGEGTFGQVVECF---DNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLAR 147
           ++L K+G+G+FG V        + K   VA+K ++    S  +  +  + E++ +  L  
Sbjct: 11  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            ++     +++         + +V E           +     F +  +     Q+ E +
Sbjct: 71  RNL-----IRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 124

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGS 267
            ++   R IH DL   N+LL + + VK+ D+  +    ++  +                 
Sbjct: 125 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH----------------- 167

Query: 268 TTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEH 326
               +    +      + APE +    +++  D W  G  L E+ + G+  +      + 
Sbjct: 168 ----YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 223

Query: 327 LAMMERVLGPLP 338
           L  +++    LP
Sbjct: 224 LHKIDKEGERLP 235

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.4 bits (239), Expect = 6e-23
 Identities = 52/331 (15%), Positives = 100/331 (30%), Gaps = 82/331 (24%)

Query: 95  KILSKMGEGTFGQVVECFDNEKKEL----VAIKIVRSIN--KYREAAMIEIDVLQRLARH 148
           K +  +G G FG V +     + E     VAIK +R     K  +  + E  V+  +   
Sbjct: 12  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNP 71

Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
            +      ++           I        L D++R++   +     +     Q+ + + 
Sbjct: 72  HV-----CRLLGICLTSTVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMN 125

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268
           ++ + RL+H DL   N+L+ + ++VK+ D+  L++                         
Sbjct: 126 YLEDRRLVHRDLAARNVLVKTPQHVKITDFG-LAKLLGAEEK------------------ 166

Query: 269 TFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328
                          + A E IL   + +  D+WS G  + EL +  +          ++
Sbjct: 167 ---EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 223

Query: 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV 388
                                     +G RL  P   T                      
Sbjct: 224 ----------------------SILEKGERLPQPPICTI--------------------- 240

Query: 389 DHSAGDLIDLLQGLLRYDPAERLKAREALRH 419
                D+  ++      D   R K RE +  
Sbjct: 241 -----DVYMIMVKCWMIDADSRPKFRELIIE 266

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.6 bits (234), Expect = 2e-22
 Identities = 58/348 (16%), Positives = 104/348 (29%), Gaps = 96/348 (27%)

Query: 95  KILSKMGEGTFGQVVECFD-----NEKKELVAIKIVR--SINKYREAAMIEIDVLQRLAR 147
           K+   +G G FGQV+E              VA+K+++  + +    A M E+ +L  +  
Sbjct: 16  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 75

Query: 148 HDIGGTRCVQIRN-WFDYRNHICIVFEKL-GPSLYDFLRKN--------------SYRSF 191
           H       V +          + ++ E     +L  +LR                     
Sbjct: 76  HLN----VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 131

Query: 192 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251
            ++ +     Q+ + + F+   + IH DL   NILL     VK+ D+       KD  Y 
Sbjct: 132 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 191

Query: 252 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311
           +                               + APE I    +    D+WS G +L E+
Sbjct: 192 R----------------------KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 229

Query: 312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM 371
            S  A       ++                         +  + G R+  PD  T     
Sbjct: 230 FSLGASPYPGVKIDEEFC---------------------RRLKEGTRMRAPDYTTP---- 264

Query: 372 RAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH 419
                                 ++   +      +P++R    E + H
Sbjct: 265 ----------------------EMYQTMLDCWHGEPSQRPTFSELVEH 290

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 66.3 bits (161), Expect = 2e-13
 Identities = 28/217 (12%), Positives = 60/217 (27%), Gaps = 31/217 (14%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD-IGGT 153
           I   MGEG    V  C+  +  E   +K  +     +++            +        
Sbjct: 4   IGKLMGEGKESAVFNCYSEKFGE-CVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSAR 62

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
              +            +   +    L + +         ++   E+   +LE VA  +  
Sbjct: 63  NEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHR 122

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273
            ++H DL   N+L+                                I +IDF  +    +
Sbjct: 123 GIVHGDLSQYNVLVSEEG----------------------------IWIIDFPQSVEVGE 154

Query: 274 DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 310
           +    +  R  R         +    D+ S    +++
Sbjct: 155 EGWREILERDVRNIITYFSRTYRTEKDINSAIDRILQ 191

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	438
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.93
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.43
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.07
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.88
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.77
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.44
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.95

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-62  Score=451.01  Aligned_cols=250  Identities=27%  Similarity=0.439  Sum_probs=217.2

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++.+.||+|+||+||+|+++.+++.||+|++.+..    ...+.+.+|+.+++.++|+||     +++++++.+++.
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~~~~~~~~~~~   80 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-----LRLYGYFHDATR   80 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTB-----CCEEEEEECSSE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCC-----CeEEEEEEECCE
Confidence            57999999999999999999999999999999997432    345678899999999988877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||||| +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|               
T Consensus        81 ~~ivmEy~~~g~L~~~l~~~~--~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~---------------  143 (263)
T d2j4za1          81 VYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG---------------  143 (263)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS---------------
T ss_pred             EEEEEeecCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCC---------------
Confidence            99999999 999999998765  799999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                  .+||+|||+|...... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+
T Consensus       144 ------------~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~  211 (263)
T d2j4za1         144 ------------ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE  211 (263)
T ss_dssp             ------------CEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             ------------CEeecccceeeecCCCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHH
Confidence                        5677777777655433 344689999999999999999999999999999999999999999887776


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..+.+....+                                                  +..+++++.+||.+||+.
T Consensus       212 ~~~~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~~L~~  241 (263)
T d2j4za1         212 TYKRISRVEFTF--------------------------------------------------PDFVTEGARDLISRLLKH  241 (263)
T ss_dssp             HHHHHHTTCCCC--------------------------------------------------CTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHcCCCCC--------------------------------------------------CccCCHHHHHHHHHHccC
Confidence            666554322111                                                  234577899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~  425 (438)
                      ||++|||++|+|+||||+++
T Consensus       242 dp~~R~t~~eil~hp~~~~~  261 (263)
T d2j4za1         242 NPSQRPMLREVLEHPWITAN  261 (263)
T ss_dssp             SGGGSCCHHHHHTCHHHHHH
T ss_pred             CHhHCcCHHHHHcCcCcCCc
Confidence            99999999999999999754

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-62  Score=451.95  Aligned_cols=257  Identities=22%  Similarity=0.373  Sum_probs=211.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .++|+++++||+|+||+||+|+++.+|+.||||+++...  ...+.+.+|+.+++.++|+||     +++++++.+++.+
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnI-----v~~~~~~~~~~~~   78 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV-----VKFYGHRREGNIQ   78 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTB-----CCEEEEEEETTEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCE-----eeEeeeeccCcee
Confidence            468999999999999999999999999999999987532  334678899999999988877     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      ||||||| +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|                
T Consensus        79 ~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~----------------  140 (271)
T d1nvra_          79 YLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD----------------  140 (271)
T ss_dssp             EEEEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC----------------
T ss_pred             EEEEeccCCCcHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCC----------------
Confidence            9999999 899999987554  799999999999999999999999999999999999997655                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCC-CcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                 .+||+|||+|......     ....+||+.|||||++.+..+ +.++|||||||++|||++|+.||...
T Consensus       141 -----------~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~  209 (271)
T d1nvra_         141 -----------NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP  209 (271)
T ss_dssp             -----------CEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSS
T ss_pred             -----------CEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCC
Confidence                       5777777777654322     234689999999999998876 57899999999999999999999765


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      ...............                                               .......+++++.+||.+
T Consensus       210 ~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~s~~~~~li~~  242 (271)
T d1nvra_         210 SDSCQEYSDWKEKKT-----------------------------------------------YLNPWKKIDSAPLALLHK  242 (271)
T ss_dssp             STTSHHHHHHHTTCT-----------------------------------------------TSTTGGGSCHHHHHHHHH
T ss_pred             ChHHHHHHHHhcCCC-----------------------------------------------CCCccccCCHHHHHHHHH
Confidence            543322221111000                                               001123457789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013678          402 LLRYDPAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f~~~~~~  428 (438)
                      ||+.||++|||++|+|+||||++..++
T Consensus       243 ~L~~dP~~R~t~~eil~hpwf~~~l~k  269 (271)
T d1nvra_         243 ILVENPSARITIPDIKKDRWYNKPLKK  269 (271)
T ss_dssp             HSCSSTTTSCCHHHHTTCTTTTCCCCC
T ss_pred             HcCCChhHCcCHHHHhcCHhhCcCCCC
Confidence            999999999999999999999987654

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-61  Score=450.40  Aligned_cols=254  Identities=26%  Similarity=0.403  Sum_probs=217.1

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      .++|+++++||+|+||+||+|+++.+|+.||||+++... ...+.+.+|+.+++.++|+||     +++++++.+++.+|
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~~~~~~~~~~~~~   93 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI-----VNYLDSYLVGDELW   93 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTB-----CCEEEEEEETTEEE
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCE-----eeEeEEEEECCEEE
Confidence            468999999999999999999999999999999997543 345678999999999998887     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      |||||| ||+|.+++.++   .+++..++.++.||+.||+|||++||+||||||+|||++.+|                 
T Consensus        94 ivmEy~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~-----------------  153 (293)
T d1yhwa1          94 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-----------------  153 (293)
T ss_dssp             EEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC-----------------
T ss_pred             EEEEecCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCC-----------------
Confidence            999999 99999988764   599999999999999999999999999999999999997655                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                                .+||+|||+|......   ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus       154 ----------~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~  223 (293)
T d1yhwa1         154 ----------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR  223 (293)
T ss_dssp             ----------CEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             ----------cEeeccchhheeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH
Confidence                      5677777777654322   234589999999999999999999999999999999999999999888776


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..+.......                                               ...+..+++++++||.+||+.
T Consensus       224 ~~~~~~~~~~~~-----------------------------------------------~~~~~~~s~~~~~li~~~L~~  256 (293)
T d1yhwa1         224 ALYLIATNGTPE-----------------------------------------------LQNPEKLSAIFRDFLNRCLDM  256 (293)
T ss_dssp             HHHHHHHHCSCC-----------------------------------------------CSSGGGSCHHHHHHHHHHTCS
T ss_pred             HHHHHHhCCCCC-----------------------------------------------CCCcccCCHHHHHHHHHHccC
Confidence            665554321100                                               011234577899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~  426 (438)
                      ||++|||++|+|+||||+...
T Consensus       257 dP~~R~s~~eil~Hp~~~~~~  277 (293)
T d1yhwa1         257 DVEKRGSAKELLQHQFLKIAK  277 (293)
T ss_dssp             STTTSCCHHHHTTCGGGGGCC
T ss_pred             ChhHCcCHHHHhcCHhhCCCC
Confidence            999999999999999997644

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.8e-61  Score=451.65  Aligned_cols=264  Identities=26%  Similarity=0.434  Sum_probs=211.0

Q ss_pred             cCCccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           86 IGENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      ..+.+.++|++.+.||+|+||+||+|+++.+++.||||++.+..  .....+.+|+.+|+.++|+||     +++++++.
T Consensus         3 ~~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnI-----v~l~~~~~   77 (307)
T d1a06a_           3 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNI-----VALDDIYE   77 (307)
T ss_dssp             ECSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTB-----CCEEEEEE
T ss_pred             CCCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCC-----CcEEEEEE
Confidence            35667889999999999999999999999999999999997532  234567789999999988877     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      +++.+||||||| ||+|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||+...            
T Consensus        78 ~~~~~~lvmE~~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~------------  143 (307)
T d1a06a_          78 SGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL------------  143 (307)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHTCS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS------------
T ss_pred             ECCEEEEEEeccCCCcHHHhhhccc--CCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeeccc------------
Confidence            999999999999 899999998754  79999999999999999999999999999999999999542            


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                  +.++.+||+|||+|......  ....+||+.|||||++.+..++.++|||||||++|+|++|..||.+
T Consensus       144 ------------~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~  211 (307)
T d1a06a_         144 ------------DEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD  211 (307)
T ss_dssp             ------------STTCCEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ------------CCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCC
Confidence                        23457899999988765433  2346899999999999999999999999999999999999999998


Q ss_pred             CChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHH
Q 013678          321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQ  400 (438)
Q Consensus       321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  400 (438)
                      .+..+....+.+....++                                              ......+++++.+||.
T Consensus       212 ~~~~~~~~~i~~~~~~~~----------------------------------------------~~~~~~~s~~~~~li~  245 (307)
T d1a06a_         212 ENDAKLFEQILKAEYEFD----------------------------------------------SPYWDDISDSAKDFIR  245 (307)
T ss_dssp             SSHHHHHHHHHTTCCCCC----------------------------------------------TTTTTTSCHHHHHHHH
T ss_pred             CCHHHHHHHHhccCCCCC----------------------------------------------CccccCCCHHHHHHHH
Confidence            877776665544221111                                              1122356789999999


Q ss_pred             HccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          401 GLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       401 ~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      +||+.||++|||++|+|+||||++..
T Consensus       246 ~~L~~dP~~R~s~~eil~hp~~~~~~  271 (307)
T d1a06a_         246 HLMEKDPEKRFTCEQALQHPWIAGDT  271 (307)
T ss_dssp             HHSCSSGGGSCCHHHHHHSTTTTSSC
T ss_pred             HHccCCHhHCcCHHHHhcCHhhCCCC
Confidence            99999999999999999999998654

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-60  Score=444.63  Aligned_cols=264  Identities=25%  Similarity=0.448  Sum_probs=226.4

Q ss_pred             CccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-------hhHHHHHHHHHHHHHHHhcCCCCcceEEecc
Q 013678           88 ENLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (438)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~  160 (438)
                      +.+.++|++.+.||+|+||+||+|+++.+|+.||||++++..       ...+.+.+|+.+|+.++|+||     |++++
T Consensus         6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~~~~   80 (293)
T d1jksa_           6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV-----ITLHE   80 (293)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTB-----CCEEE
T ss_pred             CCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCC-----CcEEE
Confidence            456789999999999999999999999999999999996422       235778999999999998877     99999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                      ++.+.+++||||||| +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|.       
T Consensus        81 ~~~~~~~~~iv~E~~~gg~L~~~i~~~~--~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~-------  151 (293)
T d1jksa_          81 VYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV-------  151 (293)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSS-------
T ss_pred             EEEECCEEEEEEEcCCCccccchhcccc--ccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCC-------
Confidence            999999999999999 999999998765  7999999999999999999999999999999999999977652       


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                      ....+||+|||+|......  .....||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus       152 ----------------~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~P  215 (293)
T d1jksa_         152 ----------------PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP  215 (293)
T ss_dssp             ----------------SSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ----------------cccceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCC
Confidence                            2346899999999775433  3346899999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+.+..+.+..+......++.                                              .....+++++++
T Consensus       216 f~~~~~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~~  249 (293)
T d1jksa_         216 FLGDTKQETLANVSAVNYEFED----------------------------------------------EYFSNTSALAKD  249 (293)
T ss_dssp             SCCSSHHHHHHHHHTTCCCCCH----------------------------------------------HHHTTSCHHHHH
T ss_pred             CCCCCHHHHHHHHHhcCCCCCc----------------------------------------------hhcCCCCHHHHH
Confidence            9998887777666543322221                                              122356778999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          398 LLQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      ||++||+.||++|||++|+|+||||+....
T Consensus       250 li~~~L~~dP~~R~s~~eil~hp~~~~~~~  279 (293)
T d1jksa_         250 FIRRLLVKDPKKRMTIQDSLQHPWIKPKDT  279 (293)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHHSTTTCC---
T ss_pred             HHHHHccCChhHCcCHHHHhcCcccCCCCh
Confidence            999999999999999999999999986443

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=5.3e-60  Score=451.36  Aligned_cols=260  Identities=28%  Similarity=0.428  Sum_probs=224.2

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      +-++|++++.||+|+||.||+|+++.+|+.||||++.... ...+.+.+|+.+|+.++|+||     |++++++.+++.+
T Consensus        24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnI-----v~~~~~~~~~~~~   98 (350)
T d1koaa2          24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL-----VNLHDAFEDDNEM   98 (350)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTB-----CCEEEEEEETTEE
T ss_pred             CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCC-----CcEEEEEEECCEE
Confidence            4478999999999999999999999999999999997543 345678899999999998887     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      ||||||| ||+|.+++.... ..+++..++.|+.||+.||+|||++|||||||||+|||++.+                 
T Consensus        99 ~ivmE~~~gg~L~~~l~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~-----------------  160 (350)
T d1koaa2          99 VMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-----------------  160 (350)
T ss_dssp             EEEECCCCSCBHHHHHTCTT-SCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-----------------
T ss_pred             EEEEEcCCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccC-----------------
Confidence            9999999 999999996543 469999999999999999999999999999999999999542                 


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                              .++.+||+|||+|.......  ....||+.|||||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus       161 --------~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~  232 (350)
T d1koaa2         161 --------RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE  232 (350)
T ss_dssp             --------TSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             --------CCCeEEEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHH
Confidence                    23468999999988765433  34689999999999999999999999999999999999999999888887


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..+......++.                                              .....+++++++||.+||+.
T Consensus       233 ~~~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~L~~  266 (350)
T d1koaa2         233 TLRNVKSCDWNMDD----------------------------------------------SAFSGISEDGKDFIRKLLLA  266 (350)
T ss_dssp             HHHHHHHTCCCSCC----------------------------------------------GGGGGCCHHHHHHHHHHCCS
T ss_pred             HHHHHHhCCCCCCc----------------------------------------------ccccCCCHHHHHHHHHHccC
Confidence            77777654332221                                              11234577899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~  426 (438)
                      ||++|||++|+|+||||++..
T Consensus       267 dP~~R~t~~eil~hp~~~~~~  287 (350)
T d1koaa2         267 DPNTRMTIHQALEHPWLTPGN  287 (350)
T ss_dssp             SGGGSCCHHHHHHSTTTSCTT
T ss_pred             ChhHCcCHHHHhcCcccCCCC
Confidence            999999999999999998753

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-61  Score=445.29  Aligned_cols=258  Identities=26%  Similarity=0.476  Sum_probs=217.2

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      +.|+++++||+|+||+||+|+++.+++.||||+++.. ....+.+.+|+.+|+.++|+||     |++++++.+.+.+||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnI-----v~l~~~~~~~~~~~l   86 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI-----VKLLDAFYYENNLWI   86 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTB-----CCEEEEEEETTEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEeeCCeEEE
Confidence            5699999999999999999999999999999999753 3445778899999999988877     999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||| +|+|.+++.+.. ..+++..++.++.||+.||+|||++||+||||||+|||++.+|                  
T Consensus        87 vmEy~~~g~L~~~~~~~~-~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~------------------  147 (288)
T d2jfla1          87 LIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG------------------  147 (288)
T ss_dssp             EEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS------------------
T ss_pred             EEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCC------------------
Confidence            99999 999999987643 4699999999999999999999999999999999999997655                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHh-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                               .+||+|||+|......   ....+||+.|+|||++.     +..|+.++|||||||++|||++|+.||.+.
T Consensus       148 ---------~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~  218 (288)
T d2jfla1         148 ---------DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL  218 (288)
T ss_dssp             ---------CEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             ---------CEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCC
Confidence                     5788888887654322   23468999999999985     345899999999999999999999999988


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +..+.+..+.....+.                                               ...+..+++++.+||.+
T Consensus       219 ~~~~~~~~i~~~~~~~-----------------------------------------------~~~~~~~s~~~~~li~~  251 (288)
T d2jfla1         219 NPMRVLLKIAKSEPPT-----------------------------------------------LAQPSRWSSNFKDFLKK  251 (288)
T ss_dssp             CGGGHHHHHHHSCCCC-----------------------------------------------CSSGGGSCHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCC-----------------------------------------------CCccccCCHHHHHHHHH
Confidence            7766665554321100                                               01123457799999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          402 LLRYDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      ||+.||++|||++|+|+||||+.....|
T Consensus       252 ~L~~dp~~R~t~~ell~hp~~~~~~~~p  279 (288)
T d2jfla1         252 CLEKNVDARWTTSQLLQHPFVTVDSNKP  279 (288)
T ss_dssp             HSCSSTTTSCCHHHHTTSGGGCCCCCHH
T ss_pred             HccCChhHCcCHHHHhcCcccCCCCCCC
Confidence            9999999999999999999998765544

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-60  Score=442.32  Aligned_cols=250  Identities=26%  Similarity=0.386  Sum_probs=214.2

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++.+.||+|+||+||+|+++.+|+.||||++++..    ...+.+.+|+.++++++|+||     +++++++.+++.
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~l~~~~~~~~~   82 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF-----VKLYFTFQDDEK   82 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTB-----CCEEEEEECSSE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCe-----eEEEEEEEECCE
Confidence            57999999999999999999999999999999997532    334678899999999998887     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||||| ||+|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||++.+|               
T Consensus        83 ~~ivmEy~~gg~L~~~~~~~~--~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~---------------  145 (288)
T d1uu3a_          83 LYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM---------------  145 (288)
T ss_dssp             EEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS---------------
T ss_pred             EEEEEEccCCCCHHHhhhccC--CCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCc---------------
Confidence            99999999 899999998765  799999999999999999999999999999999999997665               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                  .+||+|||+|......     ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus       146 ------------~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~  213 (288)
T d1uu3a_         146 ------------HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG  213 (288)
T ss_dssp             ------------CEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ------------eEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCc
Confidence                        5677777777654321     22357999999999999999999999999999999999999999988


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +..+....+.+....                                                  .+..+++++++||.+
T Consensus       214 ~~~~~~~~i~~~~~~--------------------------------------------------~p~~~s~~~~~li~~  243 (288)
T d1uu3a_         214 NEYLIFQKIIKLEYD--------------------------------------------------FPEKFFPKARDLVEK  243 (288)
T ss_dssp             SHHHHHHHHHTTCCC--------------------------------------------------CCTTCCHHHHHHHHT
T ss_pred             CHHHHHHHHHcCCCC--------------------------------------------------CCccCCHHHHHHHHH
Confidence            777766655432111                                                  123457789999999


Q ss_pred             ccccCCCCCCCHHH------HhcCCCCCCC
Q 013678          402 LLRYDPAERLKARE------ALRHPFFTRD  425 (438)
Q Consensus       402 ~L~~dP~~Rpta~e------ll~hp~f~~~  425 (438)
                      ||+.||++|||++|      +++||||++-
T Consensus       244 ~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i  273 (288)
T d1uu3a_         244 LLVLDATKRLGCEEMEGYGPLKAHPFFESV  273 (288)
T ss_dssp             TSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             HccCCHhHCcCHHHHcCCHHHHcCCccCCC
Confidence            99999999999988      5899999874

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=7.7e-60  Score=450.53  Aligned_cols=261  Identities=26%  Similarity=0.454  Sum_probs=224.9

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      .++|++++.||+|+||.||+|++..+|+.||||+++... ...+.+.+|+.+|+.++|+||     ++++++|.+++.+|
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnI-----v~~~~~~~~~~~~~  102 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL-----INLHDAFEDKYEMV  102 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTB-----CCEEEEEECSSEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCC-----CcEEEEEEECCEEE
Confidence            468999999999999999999999999999999997543 345667889999999988877     99999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      |||||| ||+|.+++.... ..+++..++.|+.||+.||+|||++||+||||||+|||++..                  
T Consensus       103 ivmE~~~gg~L~~~~~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~------------------  163 (352)
T d1koba_         103 LILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK------------------  163 (352)
T ss_dssp             EEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST------------------
T ss_pred             EEEEcCCCChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccccccccccccc------------------
Confidence            999999 999999876543 469999999999999999999999999999999999999632                  


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                             ..+.+||+|||+|.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.
T Consensus       164 -------~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~  236 (352)
T d1koba_         164 -------KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET  236 (352)
T ss_dssp             -------TCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH
T ss_pred             -------CCCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                   23478999999988765443  346899999999999999999999999999999999999999999888888


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      +..+......+|.                                              .....+++++.+||.+||+.|
T Consensus       237 ~~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~L~~d  270 (352)
T d1koba_         237 LQNVKRCDWEFDE----------------------------------------------DAFSSVSPEAKDFIKNLLQKE  270 (352)
T ss_dssp             HHHHHHCCCCCCS----------------------------------------------STTTTSCHHHHHHHHTTSCSS
T ss_pred             HHHHHhCCCCCCc----------------------------------------------ccccCCCHHHHHHHHHHccCC
Confidence            7777654333221                                              112356789999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCCCC
Q 013678          407 PAERLKAREALRHPFFTRDVRR  428 (438)
Q Consensus       407 P~~Rpta~ell~hp~f~~~~~~  428 (438)
                      |.+|||++|+|+||||+.....
T Consensus       271 p~~R~s~~eil~Hp~~~~~~~~  292 (352)
T d1koba_         271 PRKRLTVHDALEHPWLKGDHSN  292 (352)
T ss_dssp             GGGSCCHHHHHTSTTTSSCCTT
T ss_pred             hhHCcCHHHHhcCHhhCCCcch
Confidence            9999999999999999876543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-61  Score=455.46  Aligned_cols=298  Identities=22%  Similarity=0.304  Sum_probs=214.7

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ...++|+++++||+|+||+||+|+++.+|+.||+|+++..  ....+.+.+|+.+|+.++|+||     |+++++|.+.+
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnI-----v~l~~~~~~~~   77 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI-----VGFYGAFYSDG   77 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTB-----CCEEEEEECSS
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCC-----CcEEEEEEECC
Confidence            3467899999999999999999999999999999999753  3445778899999999988877     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      ++||||||| ||+|.+++.+.+  .+++..++.++.||+.||+|||+ +||+||||||+||||+.+|             
T Consensus        78 ~~~iVmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~-------------  142 (322)
T d1s9ja_          78 EISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-------------  142 (322)
T ss_dssp             EEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTC-------------
T ss_pred             EEEEEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCC-------------
Confidence            999999999 899999998765  69999999999999999999997 5999999999999997655             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCC-CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                    .+||+|||+|..... .....+||+.|+|||++.+..|+.++|||||||++|||++|+.||.+.+.
T Consensus       143 --------------~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~  208 (322)
T d1s9ja_         143 --------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA  208 (322)
T ss_dssp             --------------CEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCT
T ss_pred             --------------CEEEeeCCCccccCCCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence                          578888888775432 23456999999999999999999999999999999999999999987654


Q ss_pred             HHH-HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          324 LEH-LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       324 ~~~-~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      .+. ...+....+........ ........      .................................+.++.+||.+|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~  281 (322)
T d1s9ja_         209 KELELMFGCQVEGDAAETPPR-PRTPGRPL------SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKC  281 (322)
T ss_dssp             THHHHHC-------------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCcccCCcc-cccccccc------cccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHH
Confidence            332 22222222221110000 00000000      00000000000000000000000000001123578999999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      |++||++||||+|+|+||||++...
T Consensus       282 L~~dP~~R~ta~e~L~Hpf~~~~~~  306 (322)
T d1s9ja_         282 LIKNPAERADLKQLMVHAFIKRSDA  306 (322)
T ss_dssp             TCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred             cCCChhHCcCHHHHhhCHhhCcCCc
Confidence            9999999999999999999986433

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-59  Score=432.93  Aligned_cols=253  Identities=23%  Similarity=0.406  Sum_probs=207.3

Q ss_pred             cCCce-EEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc-
Q 013678           90 LTPRC-KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-  164 (438)
Q Consensus        90 ~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-  164 (438)
                      ..+|| ++.++||+|+||+||+|++..+++.||+|++...   ....+.+.+|+++|++++|+||     +++++++++ 
T Consensus         6 ~~gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~~~~~~~~~   80 (270)
T d1t4ha_           6 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI-----VRFYDSWEST   80 (270)
T ss_dssp             TTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEEE
T ss_pred             CCCCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCe-----eeEEEEEeec
Confidence            34555 7788999999999999999999999999998653   2345678899999999988887     999999864 


Q ss_pred             ---CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEecCcccccCCc
Q 013678          165 ---RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDY  238 (438)
Q Consensus       165 ---~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIli~~~~~~kl~df  238 (438)
                         +..+||||||| +|+|.+++.+..  .+++..++.++.||+.||+|||++|  |+||||||+|||++.         
T Consensus        81 ~~~~~~~~ivmE~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~---------  149 (270)
T d1t4ha_          81 VKGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG---------  149 (270)
T ss_dssp             SSSCEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS---------
T ss_pred             cccCCEEEEEEeCCCCCcHHHHHhccc--cccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeC---------
Confidence               45789999999 999999998765  7999999999999999999999999  999999999999953         


Q ss_pred             cccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC
Q 013678          239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL  317 (438)
Q Consensus       239 ~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  317 (438)
                                       .+..+||+|||+|...... ....+||+.|||||++.+ .++.++|||||||++|||++|+.|
T Consensus       150 -----------------~~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~P  211 (270)
T d1t4ha_         150 -----------------PTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYP  211 (270)
T ss_dssp             -----------------TTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             -----------------CCCCEEEeecCcceeccCCccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCC
Confidence                             2236788888888764443 345689999999998865 599999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |.+..+...+..... .+..|.                                              ......++++.+
T Consensus       212 f~~~~~~~~~~~~i~-~~~~~~----------------------------------------------~~~~~~~~~~~~  244 (270)
T d1t4ha_         212 YSECQNAAQIYRRVT-SGVKPA----------------------------------------------SFDKVAIPEVKE  244 (270)
T ss_dssp             TTTCSSHHHHHHHHT-TTCCCG----------------------------------------------GGGGCCCHHHHH
T ss_pred             CCCcccHHHHHHHHH-cCCCCc----------------------------------------------ccCccCCHHHHH
Confidence            987655443322111 011110                                              112345678999


Q ss_pred             HHHHccccCCCCCCCHHHHhcCCCCC
Q 013678          398 LLQGLLRYDPAERLKAREALRHPFFT  423 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~hp~f~  423 (438)
                      ||.+||+.||++|||++|+|+||||+
T Consensus       245 li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         245 IIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHHHccCCHhHCcCHHHHhCCcccC
Confidence            99999999999999999999999996

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2e-59  Score=441.67  Aligned_cols=250  Identities=26%  Similarity=0.405  Sum_probs=220.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++++.||+|+||+||+|+++.+|+.||||++++..    ...+.+.+|+.+++.++||||     +++++++.+.+.
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~~~~~~~~~~~   78 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFI-----IRMWGTFQDAQQ   78 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTB-----CCEEEEEECSSE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcCh-----hheeeeEeeCCe
Confidence            57999999999999999999999999999999997532    335678899999999998887     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|+||||| |++|.+++....  .+++..++.++.||+.||+|||++||+||||||+||||+.+|               
T Consensus        79 ~~ivmE~~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g---------------  141 (316)
T d1fota_          79 IFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG---------------  141 (316)
T ss_dssp             EEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTS---------------
T ss_pred             eeeEeeecCCccccccccccc--cccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCC---------------
Confidence            99999999 999999998765  789999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                                  .+||+|||+|..........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus       142 ------------~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  209 (316)
T d1fota_         142 ------------HIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT  209 (316)
T ss_dssp             ------------CEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             ------------CEEEecCccceEeccccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH
Confidence                        67888888888777777778999999999999999999999999999999999999999998887776


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      ...+......+                                                  +..+++++.++|.+||+.|
T Consensus       210 ~~~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~~L~~d  239 (316)
T d1fota_         210 YEKILNAELRF--------------------------------------------------PPFFNEDVKDLLSRLITRD  239 (316)
T ss_dssp             HHHHHHCCCCC--------------------------------------------------CTTSCHHHHHHHHHHTCSC
T ss_pred             HHHHHcCCCCC--------------------------------------------------CCCCCHHHHHHHHHHhhhC
Confidence            66654432111                                                  2345778999999999999


Q ss_pred             CCCCC-----CHHHHhcCCCCCCC
Q 013678          407 PAERL-----KAREALRHPFFTRD  425 (438)
Q Consensus       407 P~~Rp-----ta~ell~hp~f~~~  425 (438)
                      |.+|+     |++|+++||||++.
T Consensus       240 p~~R~~~~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         240 LSQRLGNLQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             TTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             HHhccccchhhHHHHHcCcccccC
Confidence            99996     99999999999874

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-59  Score=443.42  Aligned_cols=261  Identities=23%  Similarity=0.399  Sum_probs=228.0

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .+-++|++.+.||+|+||+||+|+++.+++.||||+++........+.+|+.+|+.++|+||     ++++++|++++++
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnI-----v~~~~~~~~~~~~   76 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNI-----LHLHESFESMEEL   76 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTB-----CCEEEEEEETTEE
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCC-----CeEEEEEEECCEE
Confidence            35689999999999999999999999999999999998776666778899999999998877     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      ||||||| |++|.+++...+ ..+++.+++.|+.||+.||+|||++||+||||||+|||++.++                
T Consensus        77 ~lvmE~~~gg~L~~~i~~~~-~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~----------------  139 (321)
T d1tkia_          77 VMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRR----------------  139 (321)
T ss_dssp             EEEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS----------------
T ss_pred             EEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCC----------------
Confidence            9999999 899999997654 4699999999999999999999999999999999999996533                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                               ...+||+|||++.......  ....||+.|+|||.+.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus       140 ---------~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~  210 (321)
T d1tkia_         140 ---------SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ  210 (321)
T ss_dssp             ---------CCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             ---------ceEEEEcccchhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHH
Confidence                     3468999999987755433  34588999999999999999999999999999999999999999988888


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..+.+....+|..                                              ....+++++++||.+||+.
T Consensus       211 ~~~~i~~~~~~~~~~----------------------------------------------~~~~~s~~~~~li~~~L~~  244 (321)
T d1tkia_         211 IIENIMNAEYTFDEE----------------------------------------------AFKEISIEAMDFVDRLLVK  244 (321)
T ss_dssp             HHHHHHHTCCCCCHH----------------------------------------------HHTTSCHHHHHHHHTTSCS
T ss_pred             HHHHHHhCCCCCChh----------------------------------------------hccCCCHHHHHHHHHHccC
Confidence            777776644333321                                              1234577899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~  426 (438)
                      ||++|||++|+|+||||++..
T Consensus       245 dp~~R~s~~eil~hp~~~~~~  265 (321)
T d1tkia_         245 ERKSRMTASEALQHPWLKQKI  265 (321)
T ss_dssp             SGGGSCCHHHHHHSHHHHSCG
T ss_pred             ChhHCcCHHHHhcCHhhccCc
Confidence            999999999999999998653

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-59  Score=442.64  Aligned_cols=250  Identities=25%  Similarity=0.414  Sum_probs=217.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++++.||+|+||.||+|+++.+|+.||||++++.    ....+.+.+|+.+|+.++|+||     ++++++|++.+.
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~I-----v~l~~~~~~~~~   79 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL-----TALKYAFQTHDR   79 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTB-----CCEEEEEECSSE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCE-----EEEEeeeccccc
Confidence            5799999999999999999999999999999999753    2345678899999999988877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +|+||||| ||+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|               
T Consensus        80 ~~iv~ey~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g---------------  142 (337)
T d1o6la_          80 LCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG---------------  142 (337)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS---------------
T ss_pred             cccceeccCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCC---------------
Confidence            99999999 999999998865  799999999999999999999999999999999999997665               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCh
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN  323 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  323 (438)
                                  .+||+|||+|+....   .....+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.+.
T Consensus       143 ------------~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~  210 (337)
T d1o6la_         143 ------------HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH  210 (337)
T ss_dssp             ------------CEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ------------CEEEeecccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCH
Confidence                        567777777765332   22346899999999999999999999999999999999999999999887


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .+....+......+                                                  +..+++++++||.+||
T Consensus       211 ~~~~~~i~~~~~~~--------------------------------------------------p~~~s~~~~dli~~~L  240 (337)
T d1o6la_         211 ERLFELILMEEIRF--------------------------------------------------PRTLSPEAKSLLAGLL  240 (337)
T ss_dssp             HHHHHHHHHCCCCC--------------------------------------------------CTTSCHHHHHHHHHHT
T ss_pred             HHHHHHHhcCCCCC--------------------------------------------------CccCCHHHHHHHHhhc
Confidence            77666554422111                                                  2346789999999999


Q ss_pred             ccCCCCCC-----CHHHHhcCCCCCCC
Q 013678          404 RYDPAERL-----KAREALRHPFFTRD  425 (438)
Q Consensus       404 ~~dP~~Rp-----ta~ell~hp~f~~~  425 (438)
                      ++||++|+     +++|+++||||++.
T Consensus       241 ~~dP~~R~~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         241 KKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             CSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             cCCchhhcccccccHHHHHcCcccccC
Confidence            99999999     49999999999763

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-59  Score=441.76  Aligned_cols=254  Identities=24%  Similarity=0.347  Sum_probs=213.0

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ..+|+++++||+|+||+||+|++..+++.||||+++...    ...+.+.+|+.+|+.++|+||     |++++++.+++
T Consensus        14 ~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnI-----v~~~~~~~~~~   88 (309)
T d1u5ra_          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT-----IQYRGCYLREH   88 (309)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEETT
T ss_pred             HHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCE-----eeEEEEEEECC
Confidence            457999999999999999999999999999999997532    334568899999999988877     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      .+||||||| +|+|..++..+.  .+++..++.++.||+.||.|||++||+||||||+|||++.+|              
T Consensus        89 ~~~iv~E~~~~g~l~~~~~~~~--~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~--------------  152 (309)
T d1u5ra_          89 TAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--------------  152 (309)
T ss_dssp             EEEEEEECCSEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT--------------
T ss_pred             EEEEEEEecCCCchHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCC--------------
Confidence            999999999 788876666543  799999999999999999999999999999999999998766              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                   .+||+|||+|...... ...+||+.|||||++.+   ..|+.++|||||||++|||++|..||.+.+
T Consensus       153 -------------~~Kl~DFG~a~~~~~~-~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~  218 (309)
T d1u5ra_         153 -------------LVKLGDFGSASIMAPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  218 (309)
T ss_dssp             -------------EEEECCCTTCBSSSSB-CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             -------------CEEEeecccccccCCC-CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCC
Confidence                         4677777777654432 34589999999999975   358999999999999999999999999887


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ..+.+..+.....+.                                                .....+++++.+||.+|
T Consensus       219 ~~~~~~~i~~~~~~~------------------------------------------------~~~~~~s~~~~~li~~~  250 (309)
T d1u5ra_         219 AMSALYHIAQNESPA------------------------------------------------LQSGHWSEYFRNFVDSC  250 (309)
T ss_dssp             HHHHHHHHHHSCCCC------------------------------------------------CSCTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCC------------------------------------------------CCCCCCCHHHHHHHHHH
Confidence            776665554321100                                                01124577999999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      |+.||++|||++|+|+||||.+...
T Consensus       251 L~~dP~~Rpt~~ell~Hp~~~~~~~  275 (309)
T d1u5ra_         251 LQKIPQDRPTSEVLLKHRFVLRERP  275 (309)
T ss_dssp             TCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred             CcCChhHCcCHHHHHhCHHhcCCCC
Confidence            9999999999999999999987643

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-60  Score=434.09  Aligned_cols=250  Identities=22%  Similarity=0.369  Sum_probs=199.5

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc--CC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RN  166 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--~~  166 (438)
                      ++|++++.||+|+||+||+|+++.+|+.||||+++..   ....+.+.+|+.++++++|+||     +++++++.+  ++
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~~~~~~~~~~~~   78 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI-----VRYYDRIIDRTNT   78 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTB-----CCEEEEEEC----
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCE-----eeEEEEEEeCCCC
Confidence            6799999999999999999999999999999998653   2345668899999999988877     999998864  46


Q ss_pred             eEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-----ceecCCCCCcEEEecCcccccCCc
Q 013678          167 HICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELR-----LIHTDLKPENILLVSAEYVKVPDY  238 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~-----ivHrDlkp~NIli~~~~~~kl~df  238 (438)
                      .+||||||| +|+|.+++.+.  ....+++..++.++.||+.||+|||++|     |+||||||+||||+.+|.      
T Consensus        79 ~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~------  152 (269)
T d2java1          79 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN------  152 (269)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSC------
T ss_pred             EEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCc------
Confidence            799999999 99999998642  2347999999999999999999999976     999999999999977664      


Q ss_pred             cccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCC
Q 013678          239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       239 ~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~  315 (438)
                                           +||+|||+|......   ....+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus       153 ---------------------vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~  211 (269)
T d2java1         153 ---------------------VKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM  211 (269)
T ss_dssp             ---------------------EEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             ---------------------EEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCC
Confidence                                 555555555443222   23358999999999999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      .||.+.+..+....+....  .+                                               ..+..+++++
T Consensus       212 ~Pf~~~~~~~~~~~i~~~~--~~-----------------------------------------------~~~~~~s~~l  242 (269)
T d2java1         212 PPFTAFSQKELAGKIREGK--FR-----------------------------------------------RIPYRYSDEL  242 (269)
T ss_dssp             CSCCCSSHHHHHHHHHHTC--CC-----------------------------------------------CCCTTSCHHH
T ss_pred             CCCCCCCHHHHHHHHHcCC--CC-----------------------------------------------CCCcccCHHH
Confidence            9999887776665554321  00                                               1123467799


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcCCCC
Q 013678          396 IDLLQGLLRYDPAERLKAREALRHPFF  422 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~hp~f  422 (438)
                      .+||.+||+.||++|||++|+|+|||+
T Consensus       243 ~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         243 NEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            999999999999999999999999996

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.2e-59  Score=444.24  Aligned_cols=250  Identities=26%  Similarity=0.416  Sum_probs=220.7

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++++.||+|+||.||+|+++.+|+.||||++.+..    ...+.+.+|+.+|+.++|+||     +++++++.+.+.
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~~~~~~~~~~~  115 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL-----VKLEFSFKDNSN  115 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTB-----CCEEEEEECSSE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcE-----eecccccccccc
Confidence            68999999999999999999999999999999997432    334678899999999988877     999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +++||||+ +|+|.+++.+..  .+++..++.++.||+.||.|||++|||||||||+|||++.+|               
T Consensus       116 ~~~v~e~~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g---------------  178 (350)
T d1rdqe_         116 LYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG---------------  178 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS---------------
T ss_pred             cccccccccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCC---------------
Confidence            99999999 999999998765  799999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH  326 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~  326 (438)
                                  .+||+|||+|+..........||+.|||||++.+..++.++|||||||++|||++|..||.+.+....
T Consensus       179 ------------~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  246 (350)
T d1rdqe_         179 ------------YIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI  246 (350)
T ss_dssp             ------------CEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ------------CEEeeeceeeeecccccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHH
Confidence                        67888888888777666677999999999999999999999999999999999999999998887776


Q ss_pred             HHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccC
Q 013678          327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYD  406 (438)
Q Consensus       327 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~d  406 (438)
                      +..+......+                                                  +..+++++.+||++||+.|
T Consensus       247 ~~~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~~L~~d  276 (350)
T d1rdqe_         247 YEKIVSGKVRF--------------------------------------------------PSHFSSDLKDLLRNLLQVD  276 (350)
T ss_dssp             HHHHHHCCCCC--------------------------------------------------CTTCCHHHHHHHHHHSCSC
T ss_pred             HHHHhcCCCCC--------------------------------------------------CccCCHHHHHHHHHHhhhC
Confidence            66664432211                                                  2345779999999999999


Q ss_pred             CCCCC-----CHHHHhcCCCCCCC
Q 013678          407 PAERL-----KAREALRHPFFTRD  425 (438)
Q Consensus       407 P~~Rp-----ta~ell~hp~f~~~  425 (438)
                      |.+|+     |++|+++||||++.
T Consensus       277 P~kR~~~~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         277 LTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             TTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             HHhccccccccHHHHHcCccccCC
Confidence            99995     99999999999864

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=4.3e-58  Score=424.43  Aligned_cols=255  Identities=29%  Similarity=0.492  Sum_probs=215.7

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----------hhHHHHHHHHHHHHHHH-hcCCCCcceEEe
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----------KYREAAMIEIDVLQRLA-RHDIGGTRCVQI  158 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~  158 (438)
                      +.++|++.+.||+|+||+||+|++..+|+.||||++++..          ...+.+.+|+.+++++. |+||     +++
T Consensus         1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnI-----v~~   75 (277)
T d1phka_           1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNI-----IQL   75 (277)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTB-----CCE
T ss_pred             CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCe-----EEE
Confidence            3578999999999999999999999999999999986532          23356789999999997 7777     999


Q ss_pred             cceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 013678          159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       159 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      ++++.+++++||||||| +|+|.+++..++  .+++..++.++.||+.||+|||++||+||||||+|||++.++      
T Consensus        76 ~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~------  147 (277)
T d1phka_          76 KDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM------  147 (277)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC------
T ss_pred             EeecccCcceEEEEEcCCCchHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCC------
Confidence            99999999999999999 999999998765  799999999999999999999999999999999999997655      


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhC------CCCCcchhHHHHHHHHH
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILG------LGWNYPCDLWSVGCILV  309 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~  309 (438)
                                           .+||+|||++......  ....+||..|+|||++.+      ..++.++||||+||++|
T Consensus       148 ---------------------~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvily  206 (277)
T d1phka_         148 ---------------------NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY  206 (277)
T ss_dssp             ---------------------CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHH
T ss_pred             ---------------------CeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhh
Confidence                                 5677777777654432  234689999999999974      34788999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccC
Q 013678          310 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVD  389 (438)
Q Consensus       310 elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (438)
                      +|++|+.||.+.+.......+......++                                              .....
T Consensus       207 eml~g~~Pf~~~~~~~~~~~i~~~~~~~~----------------------------------------------~~~~~  240 (277)
T d1phka_         207 TLLAGSPPFWHRKQMLMLRMIMSGNYQFG----------------------------------------------SPEWD  240 (277)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHTCCCCC----------------------------------------------TTTGG
T ss_pred             hhccCCCCCCCCCHHHHHHHHHhCCCCCC----------------------------------------------Ccccc
Confidence            99999999999887776666554321111                                              01123


Q ss_pred             CchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCC
Q 013678          390 HSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       390 ~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      .+++++++||.+||+.||++|||++|||+||||++
T Consensus       241 ~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         241 DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             GSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence            46789999999999999999999999999999986

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-58  Score=438.31  Aligned_cols=292  Identities=27%  Similarity=0.484  Sum_probs=235.7

Q ss_pred             CCceeeecCCc---cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCC
Q 013678           79 DGHYVFAIGEN---LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGG  152 (438)
Q Consensus        79 ~~~~~~~~~~~---~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~  152 (438)
                      .|+|...++..   +.++|+++++||+|+||+||+|+++.+|+.||||++++.   ....+.+.+|+.+|+.++|+|+  
T Consensus         2 ~~~~~~~~~~~~~~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpni--   79 (346)
T d1cm8a_           2 SGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV--   79 (346)
T ss_dssp             CSBCCEECSSSEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTB--
T ss_pred             CCcEEEeccCceeecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCe--
Confidence            47788888876   789999999999999999999999999999999999743   2345678899999999998887  


Q ss_pred             cceEEecceeccCC------eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEE
Q 013678          153 TRCVQIRNWFDYRN------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL  226 (438)
Q Consensus       153 ~~iv~~~~~~~~~~------~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  226 (438)
                         |+++++|...+      ++|||||||+.+|..+++..   .+++..++.++.||+.||+|||++||+||||||+|||
T Consensus        80 ---v~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL  153 (346)
T d1cm8a_          80 ---IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLA  153 (346)
T ss_dssp             ---CCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred             ---eEEEEEeccCccccccceEEEEEecccccHHHHHHhc---cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhh
Confidence               99999987654      68999999988999888764   5999999999999999999999999999999999999


Q ss_pred             EecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCC-CCCcchhHHHHH
Q 013678          227 LVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVG  305 (438)
Q Consensus       227 i~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG  305 (438)
                      ++.++                           .+||+|||+|..........+||+.|+|||++.+. .++.++||||||
T Consensus       154 ~~~~~---------------------------~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG  206 (346)
T d1cm8a_         154 VNEDC---------------------------ELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVG  206 (346)
T ss_dssp             ECTTC---------------------------CEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHH
T ss_pred             ccccc---------------------------ccccccccceeccCCccccccccccccCHHHHcCCCCCCccchhhcch
Confidence            97655                           67888888888777777778999999999999875 468999999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccc-hhhh
Q 013678          306 CILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL-PNLI  384 (438)
Q Consensus       306 ~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  384 (438)
                      |++|+|++|+.||.+.+..+.+..+....+.+|..+...........+.                    ...... ....
T Consensus       207 vil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~  266 (346)
T d1cm8a_         207 CIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYM--------------------KGLPELEKKDF  266 (346)
T ss_dssp             HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHH--------------------HHSCCCCCCCG
T ss_pred             HHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhh--------------------ccCCcccccch
Confidence            9999999999999999999999999999999987765432211111000                    000000 0111


Q ss_pred             hhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          385 MQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       385 ~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .......++++.+||.+||++||++||||+|+|+||||++-
T Consensus       267 ~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         267 ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             HHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence            12234567899999999999999999999999999999863

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-58  Score=430.75  Aligned_cols=281  Identities=32%  Similarity=0.513  Sum_probs=224.9

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      ++|+++++||+|+||+||+|++..+|+.||||+++...   ...+.+.+|+.++++++|+||     +++++++.+++++
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~I-----v~~~~~~~~~~~~   76 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----VKLLDVIHTENKL   76 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTB-----CCEEEEEEETTEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcE-----EEeccccccccce
Confidence            58999999999999999999999999999999996532   235678899999999988877     9999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      |+|||||++++.+++.......+++..++.++.||+.||+|||++|||||||||+|||++.++                 
T Consensus        77 ~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~-----------------  139 (298)
T d1gz8a_          77 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG-----------------  139 (298)
T ss_dssp             EEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS-----------------
T ss_pred             eEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccC-----------------
Confidence            999999977888877766556799999999999999999999999999999999999997655                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                .+||+|||.|......   .....||+.|+|||++.... ++.++|||||||++|+|++|+.||.+.+..
T Consensus       140 ----------~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~  209 (298)
T d1gz8a_         140 ----------AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI  209 (298)
T ss_dssp             ----------CEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             ----------cceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHH
Confidence                      5677777766554332   23358999999999988776 579999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +.+..+....+.+++..+........      ....++...               ...........+.++.+||.+||+
T Consensus       210 ~~~~~i~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~---------------~~~~~~~~~~~s~~~~dll~~mL~  268 (298)
T d1gz8a_         210 DQLFRIFRTLGTPDEVVWPGVTSMPD------YKPSFPKWA---------------RQDFSKVVPPLDEDGRSLLSQMLH  268 (298)
T ss_dssp             HHHHHHHHHHCCCCTTTSTTGGGSTT------CCTTSCCCC---------------CCCHHHHSTTCCHHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCCchhhccccccccc------ccccccccc---------------ccchhhhccCCCHHHHHHHHHHcc
Confidence            99998888887766433221111000      000011000               011112234667899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~~  425 (438)
                      .||++|||++|+|+||||++-
T Consensus       269 ~dP~~R~t~~ell~H~ff~~~  289 (298)
T d1gz8a_         269 YDPNKRISAKAALAHPFFQDV  289 (298)
T ss_dssp             SSTTTSCCHHHHHTSGGGTTC
T ss_pred             CChhHCcCHHHHhCCHhhccC
Confidence            999999999999999999864

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-58  Score=434.70  Aligned_cols=276  Identities=27%  Similarity=0.458  Sum_probs=213.6

Q ss_pred             EEeeeeeecceEEEEEEECCCCcEEEEEEeecchh------hHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK------YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      .+++||+|+||+||+|+++.+|+.||||+++....      ..+.+.+|+.+++.++|+||     |++++++.+++++|
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnI-----v~~~~~~~~~~~~~   76 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI-----IGLLDAFGHKSNIS   76 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTB-----CCEEEEECCTTCCE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCE-----eEEEeeeccCCcee
Confidence            46899999999999999999999999999864322      12467899999999998877     99999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||||.+++...+.... ..+++..++.+++||+.||+|||++||+||||||+|||++.++                  
T Consensus        77 ivmE~~~~~~~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~------------------  137 (299)
T d1ua2a_          77 LVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG------------------  137 (299)
T ss_dssp             EEEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC------------------
T ss_pred             ehhhhhcchHHhhhhhcc-cCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCC------------------
Confidence            999999444444443322 4799999999999999999999999999999999999997766                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                               .+||+|||+|......   ....+||+.|+|||++.+. .++.++|||||||++|||++|..||.+.++.+
T Consensus       138 ---------~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~  208 (299)
T d1ua2a_         138 ---------VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD  208 (299)
T ss_dssp             ---------CEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ---------ccccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH
Confidence                     4566666666543332   2235799999999999765 58999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ++..|.+.+|.++...+......       .....+..   .            ............++++.+||.+||++
T Consensus       209 ~l~~i~~~~~~~~~~~~~~~~~~-------~~~~~~~~---~------------~~~~~~~~~~~~s~~~~dll~~~L~~  266 (299)
T d1ua2a_         209 QLTRIFETLGTPTEEQWPDMCSL-------PDYVTFKS---F------------PGIPLHHIFSAAGDDLLDLIQGLFLF  266 (299)
T ss_dssp             HHHHHHHHHCCCCTTTSSSTTSS-------TTCCCCCC---C------------CCCCHHHHCTTCCHHHHHHHHHHHCS
T ss_pred             HHHHHHHhcCCCChhhccchhcc-------chhhhhcc---C------------CCCChHHhcccCCHHHHHHHHHHccC
Confidence            99999998887764321111000       00000000   0            00001122345678999999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCC
Q 013678          406 DPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       406 dP~~Rpta~ell~hp~f~~~~  426 (438)
                      ||++||||+|+|+||||++..
T Consensus       267 dP~~R~sa~e~L~Hp~f~~~p  287 (299)
T d1ua2a_         267 NPCARITATQALKMKYFSNRP  287 (299)
T ss_dssp             STTTSCCHHHHHTSGGGTSSS
T ss_pred             ChhhCcCHHHHhCCHhhCCCC
Confidence            999999999999999998754

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-57  Score=428.49  Aligned_cols=285  Identities=30%  Similarity=0.483  Sum_probs=220.4

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCC-CcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceec--
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD--  163 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~--  163 (438)
                      ..++|+++++||+|+||+||+|++..+ ++.||||+++...   .....+.+|+.+++.|...  .|+||++++++|.  
T Consensus         5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~--~HpnIv~~~~~~~~~   82 (305)
T d1blxa_           5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF--EHPNVVRLFDVCTVS   82 (305)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHT--CCTTBCCEEEEEEEE
T ss_pred             CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhc--CCCCcceeeeeeccc
Confidence            357999999999999999999999765 6789999986432   2234567899998888522  2344499999885  


Q ss_pred             ---cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          164 ---YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       164 ---~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                         ...+++++||||.+++..+........+++..++.++.||+.||+|||++||+||||||+|||++.++         
T Consensus        83 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~---------  153 (305)
T d1blxa_          83 RTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG---------  153 (305)
T ss_dssp             ECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC---------
T ss_pred             ccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCC---------
Confidence               34589999999955555555555556799999999999999999999999999999999999997665         


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCC--CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                        .+||+|||++.....  ......||+.|+|||++.+..|+.++|||||||++|||++|+.||
T Consensus       154 ------------------~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf  215 (305)
T d1blxa_         154 ------------------QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF  215 (305)
T ss_dssp             ------------------CEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ------------------CeeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCC
Confidence                              466777776654332  223468999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      .+.+..+++..+.+..+.++...+..........+..                       .............++.+.+|
T Consensus       216 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~s~~~~dl  272 (305)
T d1blxa_         216 RGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHS-----------------------KSAQPIEKFVTDIDELGKDL  272 (305)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCC-----------------------CCCCCGGGTCCSCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHhhCCCchhcccccccchhhhhcc-----------------------ccccchhhccccCCHHHHHH
Confidence            9999999999999988876643221111000000000                       01111223345678899999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          399 LQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      |.+||++||++||||+|+|+||||++-.
T Consensus       273 i~~mL~~dP~~R~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         273 LLKCLTFNPAKRISAYSALSHPYFQDLE  300 (305)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHHHCcCChhHCcCHHHHhcChhhcCch
Confidence            9999999999999999999999998753

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-57  Score=429.58  Aligned_cols=249  Identities=25%  Similarity=0.386  Sum_probs=211.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHH-HHHhcCCCCcceEEecceeccCC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQ-RLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~-~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ++|++.+.||+|+||+||+|+++.+++.||||++++.    ....+.+.+|..++. .++|+||     +++++++.+++
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~I-----v~~~~~~~~~~   76 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL-----THMFCTFQTKE   76 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTB-----CCEEEEEECSS
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcE-----EEEEEEEccCC
Confidence            5799999999999999999999999999999999753    233455677777765 5677776     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      .+||||||| +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|              
T Consensus        77 ~~yivmEy~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~--------------  140 (320)
T d1xjda_          77 NLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG--------------  140 (320)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS--------------
T ss_pred             ceeEEEeecCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCC--------------
Confidence            999999999 999999998765  799999999999999999999999999999999999997665              


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCC---CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE  322 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  322 (438)
                                   .+||+|||++.....   ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+
T Consensus       141 -------------~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~  207 (320)
T d1xjda_         141 -------------HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD  207 (320)
T ss_dssp             -------------CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             -------------ceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCC
Confidence                         566777776654322   2233589999999999999999999999999999999999999999888


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ..+....+......                                                  .+..+++++.+||.+|
T Consensus       208 ~~~~~~~i~~~~~~--------------------------------------------------~p~~~s~~~~dli~~~  237 (320)
T d1xjda_         208 EEELFHSIRMDNPF--------------------------------------------------YPRWLEKEAKDLLVKL  237 (320)
T ss_dssp             HHHHHHHHHHCCCC--------------------------------------------------CCTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCC--------------------------------------------------CCccCCHHHHHHHHHh
Confidence            77766665432111                                                  1224577899999999


Q ss_pred             cccCCCCCCCHH-HHhcCCCCCC
Q 013678          403 LRYDPAERLKAR-EALRHPFFTR  424 (438)
Q Consensus       403 L~~dP~~Rpta~-ell~hp~f~~  424 (438)
                      |+.||++|||+. |+++||||++
T Consensus       238 L~~dP~~R~s~~~~l~~hpff~~  260 (320)
T d1xjda_         238 FVREPEKRLGVRGDIRQHPLFRE  260 (320)
T ss_dssp             SCSSGGGSBTTBSCGGGSGGGTT
T ss_pred             cccCCCCCcCHHHHHHhCchhcc
Confidence            999999999995 8999999986

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3e-57  Score=434.78  Aligned_cols=256  Identities=24%  Similarity=0.372  Sum_probs=206.5

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      ++|++++.||+|+||.||+|++..+|+.||||++.+..    .....+.+|...++.+.+.  .||||+++++++.+.+.
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~--~hpnIv~l~~~~~~~~~   81 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG--DCPFIVCMSYAFHTPDK   81 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSS--CCTTBCCEEEEEECSSE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcC--CCCcEEEEEEEEEECCE
Confidence            57999999999999999999999999999999996432    2234455665555555432  34555999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      +||||||| ||+|.+++.+..  .+++..++.++.||+.||+|||++|||||||||+|||++.+|               
T Consensus        82 ~~ivmE~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g---------------  144 (364)
T d1omwa3          82 LSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG---------------  144 (364)
T ss_dssp             EEEEECCCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSS---------------
T ss_pred             EEEEEEecCCCcHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCC---------------
Confidence            99999999 999999998765  789999999999999999999999999999999999997655               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                  .+||+|||+|...... ....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..
T Consensus       145 ------------~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~  212 (364)
T d1omwa3         145 ------------HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK  212 (364)
T ss_dssp             ------------CEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSS
T ss_pred             ------------cEEEeeeceeeecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHH
Confidence                        5677777777654333 334689999999999975 56899999999999999999999999875543


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +............                                               ...+..+++++.+||.+||+
T Consensus       213 ~~~~~~~~~~~~~-----------------------------------------------~~~~~~~s~~~~~li~~~L~  245 (364)
T d1omwa3         213 DKHEIDRMTLTMA-----------------------------------------------VELPDSFSPELRSLLEGLLQ  245 (364)
T ss_dssp             CHHHHHHHSSSCC-----------------------------------------------CCCCSSSCHHHHHHHHHHTC
T ss_pred             HHHHHHHhcccCC-----------------------------------------------CCCCCCCCHHHHHHHHHHcc
Confidence            3222221111110                                               11223567899999999999


Q ss_pred             cCCCCCCC-----HHHHhcCCCCCCC
Q 013678          405 YDPAERLK-----AREALRHPFFTRD  425 (438)
Q Consensus       405 ~dP~~Rpt-----a~ell~hp~f~~~  425 (438)
                      .||++|||     |+|+++||||++-
T Consensus       246 ~dP~~R~t~~~~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         246 RDVNRRLGCLGRGAQEVKESPFFRSL  271 (364)
T ss_dssp             SSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred             cCHHHhCCCcccCHHHHHcCccccCC
Confidence            99999999     8999999999863

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-58  Score=437.01  Aligned_cols=266  Identities=25%  Similarity=0.462  Sum_probs=211.5

Q ss_pred             ccCCceEEEee-eeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceecc--
Q 013678           89 NLTPRCKILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDY--  164 (438)
Q Consensus        89 ~~~~~y~~~~~-lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~--  164 (438)
                      .+.++|+++++ ||+|+||+||+|++..+++.||||+++..    ....+|+.++.++ +|+||     ++++++|++  
T Consensus         8 ~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~----~~~~~E~~~~~~~~~hpnI-----v~l~~~~~~~~   78 (335)
T d2ozaa1           8 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHI-----VRIVDVYENLY   78 (335)
T ss_dssp             CGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTB-----CCEEEEEEEEE
T ss_pred             CcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc----HHHHHHHHHHHHhcCCCCC-----CeEEEEEeecc
Confidence            34578999865 99999999999999999999999999753    4567899987766 56666     999999865  


Q ss_pred             --CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 013678          165 --RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL  241 (438)
Q Consensus       165 --~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~  241 (438)
                        +.++||||||| ||+|.+++..++...+++..++.|+.||+.||+|||++||+||||||+|||++..+          
T Consensus        79 ~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~----------  148 (335)
T d2ozaa1          79 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR----------  148 (335)
T ss_dssp             TTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSS----------
T ss_pred             cCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccc----------
Confidence              46899999999 89999999876656799999999999999999999999999999999999997533          


Q ss_pred             ccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                                    ....+||+|||+|+.....  ....+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.
T Consensus       149 --------------~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~  214 (335)
T d2ozaa1         149 --------------PNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY  214 (335)
T ss_dssp             --------------TTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCE
T ss_pred             --------------ccccccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCC
Confidence                          3456899999998765432  344689999999999999899999999999999999999999998


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      +.+.......+.....                    .....+|.                      .....+++++.+||
T Consensus       215 ~~~~~~~~~~~~~~i~--------------------~~~~~~~~----------------------~~~~~~s~~~~~li  252 (335)
T d2ozaa1         215 SNHGLAISPGMKTRIR--------------------MGQYEFPN----------------------PEWSEVSEEVKMLI  252 (335)
T ss_dssp             ETTCC--------CCC--------------------SCSSSCCT----------------------THHHHSCHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHh--------------------cCCCCCCC----------------------cccccCCHHHHHHH
Confidence            7654443332221100                    00000110                      01123577899999


Q ss_pred             HHccccCCCCCCCHHHHhcCCCCCCCCCCc
Q 013678          400 QGLLRYDPAERLKAREALRHPFFTRDVRRP  429 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~hp~f~~~~~~~  429 (438)
                      .+||+.||++|||+.|+|+||||.+....+
T Consensus       253 ~~~L~~dP~~R~s~~eil~hp~~~~~~~~~  282 (335)
T d2ozaa1         253 RNLLKTEPTQRMTITEFMNHPWIMQSTKVP  282 (335)
T ss_dssp             HHHSCSSTTTSCCHHHHHHSHHHHTTTSSC
T ss_pred             HHHccCChhHCcCHHHHHcCHHhhCCCCCC
Confidence            999999999999999999999998765544

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-57  Score=418.25  Aligned_cols=250  Identities=24%  Similarity=0.419  Sum_probs=206.3

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-------hhHHHHHHHHHHHHHHHhcCCCCcceEEeccee
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~  162 (438)
                      +.++|++.+.||+|+||+||+|++..+|+.||||++++..       .....+.+|+.+++++++.   |+||+++++++
T Consensus         2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~---h~nIv~~~~~~   78 (273)
T d1xwsa_           2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG---FSGVIRLLDWF   78 (273)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSS---SCSBCCEEEEE
T ss_pred             CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccC---CCCccEEEEEE
Confidence            4678999999999999999999999999999999987432       1123456899999999731   34559999999


Q ss_pred             ccCCeEEEEEccC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 013678          163 DYRNHICIVFEKL-G-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF  240 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~-~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l  240 (438)
                      .+.+.+|+||||+ + +++.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+          
T Consensus        79 ~~~~~~~lv~e~~~~~~~l~~~~~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~----------  146 (273)
T d1xwsa_          79 ERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN----------  146 (273)
T ss_dssp             ECSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETT----------
T ss_pred             eeCCeEEEEEEeccCcchHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecC----------
Confidence            9999999999999 5 58888887765  79999999999999999999999999999999999999743          


Q ss_pred             cccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-CcccccCCCcchhHHHhCCCC-CcchhHHHHHHHHHHHHhCCCCC
Q 013678          241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf  318 (438)
                                      ...+||+|||+|...... .....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||
T Consensus       147 ----------------~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf  210 (273)
T d1xwsa_         147 ----------------RGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF  210 (273)
T ss_dssp             ----------------TTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ----------------CCeEEECccccceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCC
Confidence                            235788888888764433 345689999999999988765 67899999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      .+.+.      +.+..                                                  ......+++++.+|
T Consensus       211 ~~~~~------i~~~~--------------------------------------------------~~~~~~~s~~~~~l  234 (273)
T d1xwsa_         211 EHDEE------IIRGQ--------------------------------------------------VFFRQRVSSECQHL  234 (273)
T ss_dssp             CSHHH------HHHCC--------------------------------------------------CCCSSCCCHHHHHH
T ss_pred             CCchH------Hhhcc--------------------------------------------------cCCCCCCCHHHHHH
Confidence            65211      11100                                                  01123467899999


Q ss_pred             HHHccccCCCCCCCHHHHhcCCCCCCCC
Q 013678          399 LQGLLRYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      |.+||+.||++|||++|+|+||||++..
T Consensus       235 i~~~L~~dp~~R~s~~eil~hp~~~~~~  262 (273)
T d1xwsa_         235 IRWCLALRPSDRPTFEEIQNHPWMQDVL  262 (273)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             HHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence            9999999999999999999999998753

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2e-56  Score=416.98  Aligned_cols=278  Identities=28%  Similarity=0.464  Sum_probs=217.6

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      +||+++++||+|+||+||+|+++ +|+.||||+++...   ...+.+.+|+.+|++++|+||     +++++++.+.+..
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~~~~~~~~~~~~   75 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI-----VKLYDVIHTKKRL   75 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTB-----CCEEEEEECSSCE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcE-----EeeeeecccCCce
Confidence            58999999999999999999985 78899999996532   235678899999999988877     9999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      |++||++++++...+.... ..+++..++.++.||+.||+|||++|||||||||+|||++.++                 
T Consensus        76 ~i~~e~~~~~~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~-----------------  137 (286)
T d1ob3a_          76 VLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG-----------------  137 (286)
T ss_dssp             EEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS-----------------
T ss_pred             eEEEEeehhhhHHHHHhhc-CCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCC-----------------
Confidence            9999999555555554433 4799999999999999999999999999999999999997665                 


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC---CcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCChH
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENL  324 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~  324 (438)
                                .+||+|||.|......   .....|++.|+|||.+.+. .++.++|||||||++|||++|+.||.+.+..
T Consensus       138 ----------~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~  207 (286)
T d1ob3a_         138 ----------ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA  207 (286)
T ss_dssp             ----------CEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             ----------CEEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHH
Confidence                      5677777776554322   2334789999999999865 4689999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +++..+.+..+.++...+..........      ..+..               .............++++.|||++||+
T Consensus       208 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~~---------------~~~~~~~~~~~~~s~~~~dli~~~L~  266 (286)
T d1ob3a_         208 DQLMRIFRILGTPNSKNWPNVTELPKYD------PNFTV---------------YEPLPWESFLKGLDESGIDLLSKMLK  266 (286)
T ss_dssp             HHHHHHHHHHCCCCTTTSTTGGGSTTCC------TTCCC---------------CCCCCGGGTCCSCCHHHHHHHHHHTC
T ss_pred             HHHHHHHHhhCCCChhhccchhhhhhcc------ccccc---------------ccCcchhhhcccCCHHHHHHHHHHcc
Confidence            9999888888876643322111100000      00000               00011122345667899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCC
Q 013678          405 YDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       405 ~dP~~Rpta~ell~hp~f~~  424 (438)
                      +||++|||++|+|+||||++
T Consensus       267 ~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         267 LDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             SSTTTSCCHHHHHTSGGGGC
T ss_pred             CChhHCcCHHHHhcCcccCc
Confidence            99999999999999999975

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-56  Score=425.38  Aligned_cols=302  Identities=26%  Similarity=0.425  Sum_probs=228.0

Q ss_pred             CceeeecCC-c--cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCc
Q 013678           80 GHYVFAIGE-N--LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGT  153 (438)
Q Consensus        80 ~~~~~~~~~-~--~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~  153 (438)
                      .+|++.+|+ .  +.++|+++++||+|+||+||+|+++.+|+.||||++++.   ......+.+|+.++++++|+||   
T Consensus         2 ~~~~~~~~~~~f~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnI---   78 (355)
T d2b1pa1           2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI---   78 (355)
T ss_dssp             CEEEEEETTEEEEEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTB---
T ss_pred             CCEEEEeCCcceeecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCe---
Confidence            478999999 3  448999999999999999999999999999999999753   2344568899999999988877   


Q ss_pred             ceEEecceec------cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEE
Q 013678          154 RCVQIRNWFD------YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL  227 (438)
Q Consensus       154 ~iv~~~~~~~------~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli  227 (438)
                        ++++++|.      +..++|+|||||.+++.+.+.    ..+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus        79 --v~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~  152 (355)
T d2b1pa1          79 --ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV  152 (355)
T ss_dssp             --CCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             --eEEEEEEecccccccCceeEEEEeccchHHHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccc
Confidence              99999885      347899999999767766663    259999999999999999999999999999999999999


Q ss_pred             ecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC--CcccccCCCcchhHHHhCCCCCcchhHHHHH
Q 013678          228 VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVG  305 (438)
Q Consensus       228 ~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  305 (438)
                      +.++                           .++++|||.+......  ....+||+.|+|||++.+..++.++||||+|
T Consensus       153 ~~~~---------------------------~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG  205 (355)
T d2b1pa1         153 KSDC---------------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG  205 (355)
T ss_dssp             CTTC---------------------------CEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHH
T ss_pred             cccc---------------------------ceeeechhhhhccccccccccccccccccChhhhcCCCCCCCccccccc
Confidence            7766                           4566666665543322  2345789999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhh
Q 013678          306 CILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIM  385 (438)
Q Consensus       306 ~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (438)
                      |++|+|++|+.||.+.+.......+....+.++..++.........+...........       ....... .......
T Consensus       206 ~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~  277 (355)
T d2b1pa1         206 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT-------FPKLFPD-SLFPADS  277 (355)
T ss_dssp             HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCC-------HHHHSCG-GGSCCSS
T ss_pred             chHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccc-------ccccccc-ccccccc
Confidence            9999999999999999999999999988888877776655444444433321111000       0000000 0000001


Q ss_pred             hccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       386 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      ......++++.+||++||++||++||||+|||+||||+..
T Consensus       278 ~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~  317 (355)
T d2b1pa1         278 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  317 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             cccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence            1112346789999999999999999999999999999864

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-55  Score=422.67  Aligned_cols=278  Identities=28%  Similarity=0.480  Sum_probs=221.0

Q ss_pred             ceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec------cCC
Q 013678           93 RCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD------YRN  166 (438)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~------~~~  166 (438)
                      +|+.+++||+|+||+||+|++..+|+.||||++.....   ...+|+.+|++++|+||     ++++++|.      +..
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h~ni-----v~~~~~~~~~~~~~~~~   92 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNI-----VRLRYFFYSSGEKKDEV   92 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---SCCHHHHHHHHCCCTTB-----CCEEEEEEEC--CCSCC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch---HHHHHHHHHHhcCCCCC-----CcEEEEEEecCccCCce
Confidence            69999999999999999999999999999999976432   23479999999988877     99988874      334


Q ss_pred             eEEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          167 HICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       167 ~~~lv~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      ++|||||||++++.+.+..  .....+++..++.++.||+.||+|||++||+||||||+|||++.++             
T Consensus        93 ~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~-------------  159 (350)
T d1q5ka_          93 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT-------------  159 (350)
T ss_dssp             EEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTT-------------
T ss_pred             EEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCC-------------
Confidence            7899999996666555532  2335799999999999999999999999999999999999996543             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCC--CCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHHHhCCCCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTH  321 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~  321 (438)
                                   ..+||+|||++.....  .....+||..|+|||.+.+. .++.++|||||||++|||++|..||...
T Consensus       160 -------------~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~  226 (350)
T d1q5ka_         160 -------------AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD  226 (350)
T ss_dssp             -------------CCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred             -------------CceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCC
Confidence                         2578888888876433  33446899999999998765 6899999999999999999999999999


Q ss_pred             ChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHH
Q 013678          322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQG  401 (438)
Q Consensus       322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~  401 (438)
                      +..+++..+.+.+|.++.+.+........       ...++.....              ..........++++.+||.+
T Consensus       227 ~~~~~l~~i~~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~--------------~~~~~~~~~~s~~~~dLl~~  285 (350)
T d1q5ka_         227 SGVDQLVEIIKVLGTPTREQIREMNPNYT-------EFKFPQIKAH--------------PWTKVFRPRTPPEAIALCSR  285 (350)
T ss_dssp             SHHHHHHHHHHHHCCCCHHHHHHHCC----------CCCCCCCCCC--------------CGGGTSCTTSCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhCCChHHhhhhhccchh-------hccccccccC--------------chhhhcccCCCHHHHHHHHH
Confidence            99999999999999988776554322111       1111110000              00111223567889999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCC
Q 013678          402 LLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       402 ~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      ||++||++||||.|+|+||||++-
T Consensus       286 mL~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         286 LLEYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             HSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             HccCChhHCcCHHHHhcCHhhccc
Confidence            999999999999999999999763

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.7e-56  Score=412.32  Aligned_cols=248  Identities=19%  Similarity=0.282  Sum_probs=207.9

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      .++|++.++||+|+||+||+|++..+++.||||+++......+.+.+|+.+|+.++|+||     |++++++.+++.++|
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnI-----v~~~~~~~~~~~~~i   90 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL-----VQLLGVCTREPPFYI   90 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTB-----CCEEEEECSSSSCEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCE-----ecCCccEeeCCeeEE
Confidence            368999999999999999999999999999999998776677889999999999998887     999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||| +|+|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++                  
T Consensus        91 v~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~------------------  152 (287)
T d1opja_          91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH------------------  152 (287)
T ss_dssp             EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG------------------
T ss_pred             EeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCC------------------
Confidence            99999 99999999877667899999999999999999999999999999999999997766                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCCCc----ccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQDHS----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE  325 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  325 (438)
                               .+||+|||+|+.......    ...||+.|+|||++.+..++.++|||||||++|||++|..||....+..
T Consensus       153 ---------~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~  223 (287)
T d1opja_         153 ---------LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS  223 (287)
T ss_dssp             ---------CEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHH
T ss_pred             ---------cEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHH
Confidence                     567777777765443321    2358899999999999999999999999999999999766654444333


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..+...- .                     +                          ...+..+++++.+||.+||+.
T Consensus       224 ~~~~~i~~~-~---------------------~--------------------------~~~~~~~~~~l~~li~~cl~~  255 (287)
T d1opja_         224 QVYELLEKD-Y---------------------R--------------------------MERPEGCPEKVYELMRACWQW  255 (287)
T ss_dssp             HHHHHHHTT-C---------------------C--------------------------CCCCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHhcC-C---------------------C--------------------------CCCCccchHHHHHHHHHHcCC
Confidence            332221110 0                     0                          112235677899999999999


Q ss_pred             CCCCCCCHHHHhc
Q 013678          406 DPAERLKAREALR  418 (438)
Q Consensus       406 dP~~Rpta~ell~  418 (438)
                      ||++|||++|+++
T Consensus       256 dP~~Rps~~ei~~  268 (287)
T d1opja_         256 NPSDRPSFAEIHQ  268 (287)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             CHhHCcCHHHHHH
Confidence            9999999999976

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-55  Score=414.63  Aligned_cols=284  Identities=26%  Similarity=0.436  Sum_probs=212.8

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc---
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY---  164 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~---  164 (438)
                      .+||+++++||+|+||+||+|++..+|+.||||++...   ......+.+|+.+|+.++|+|+     +++++++..   
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~ni-----i~~~~~~~~~~~   83 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV-----VNLIEICRTKAS   83 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTB-----CCEEEEEEC---
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCc-----cceEeeeecccc
Confidence            37999999999999999999999999999999998643   2344678899999999999887     777777643   


Q ss_pred             -----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          165 -----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       165 -----~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                           ++++|+|||||++.+...+... ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+      
T Consensus        84 ~~~~~~~~~~iv~e~~~~~~~~~~~~~-~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~------  156 (318)
T d3blha1          84 PYNRCKGSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVL------  156 (318)
T ss_dssp             -------CEEEEEECCCEEHHHHHTCT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCE------
T ss_pred             cccccCceEEEEEeccCCCccchhhhc-ccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcE------
Confidence                 4579999999965555554433 3579999999999999999999999999999999999999877654      


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCC-------CCcccccCCCcchhHHHhCC-CCCcchhHHHHHHHHHHH
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-------DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVEL  311 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~el  311 (438)
                                           ||+|||++.....       .....+||+.|+|||++.+. .++.++|||||||++|||
T Consensus       157 ---------------------kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el  215 (318)
T d3blha1         157 ---------------------KLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM  215 (318)
T ss_dssp             ---------------------EECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             ---------------------EeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeH
Confidence                                 5555555433221       12234799999999999876 689999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCc
Q 013678          312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHS  391 (438)
Q Consensus       312 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (438)
                      ++|+.||.+.++......+.+..+.++.............       ..+..............           .....
T Consensus       216 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-----------~~~~~  277 (318)
T d3blha1         216 WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY-------EKLELVKGQKRKVKDRL-----------KAYVR  277 (318)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC--------------CCSSCCBCHHHHH-----------HHHHC
T ss_pred             hhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhh-------hhhcccccccccchhhh-----------ccccC
Confidence            9999999999999999999999888775432211100000       00000000000000000           00122


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          392 AGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       392 ~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      +++++|||.+||++||++||||+|+|+||||+..
T Consensus       278 ~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~  311 (318)
T d3blha1         278 DPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  311 (318)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence            5678999999999999999999999999999965

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-55  Score=402.12  Aligned_cols=245  Identities=25%  Similarity=0.380  Sum_probs=199.2

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      ++|++.++||+|+||+||+|++. +++.||||+++......+.+.+|+.++++++|+||     +++++++..++.++||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnI-----v~~~g~~~~~~~~~lv   78 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL-----VQLYGVCLEQAPICLV   78 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTB-----CCEEEEECSSSSCEEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCc-----ccccceeccCCceEEE
Confidence            57999999999999999999975 56789999998777777889999999999998887     9999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||| +|+|.+++.... ..+++..+..++.||+.||+|||+++|+||||||+|||++.++                   
T Consensus        79 ~E~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~-------------------  138 (263)
T d1sm2a_          79 FEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ-------------------  138 (263)
T ss_dssp             EECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGG-------------------
T ss_pred             EEecCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCC-------------------
Confidence            9999 999999987654 4689999999999999999999999999999999999998766                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  325 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~  325 (438)
                              .+||+|||+|+......    ....||..|+|||++.+..++.++|||||||++|||+| |.+||...+..+
T Consensus       139 --------~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~  210 (263)
T d1sm2a_         139 --------VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE  210 (263)
T ss_dssp             --------CEEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHH
T ss_pred             --------CeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHH
Confidence                    45666666665433221    22478999999999999999999999999999999999 566776666665


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..+.....                       .                          ..+...++++.+||.+||+.
T Consensus       211 ~~~~i~~~~~-----------------------~--------------------------~~p~~~~~~l~~li~~cl~~  241 (263)
T d1sm2a_         211 VVEDISTGFR-----------------------L--------------------------YKPRLASTHVYQIMNHCWKE  241 (263)
T ss_dssp             HHHHHHHTCC-----------------------C--------------------------CCCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHhcCC-----------------------C--------------------------CCccccCHHHHHHHHHHccC
Confidence            5555443210                       0                          11224567899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q 013678          406 DPAERLKAREALRH  419 (438)
Q Consensus       406 dP~~Rpta~ell~h  419 (438)
                      ||++|||++||++|
T Consensus       242 ~p~~Rps~~~il~~  255 (263)
T d1sm2a_         242 RPEDRPAFSRLLRQ  255 (263)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             CHhHCcCHHHHHHH
Confidence            99999999999986

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-55  Score=417.96  Aligned_cols=291  Identities=26%  Similarity=0.480  Sum_probs=226.9

Q ss_pred             CceeeecCC---ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCc
Q 013678           80 GHYVFAIGE---NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGT  153 (438)
Q Consensus        80 ~~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~  153 (438)
                      ++|...++.   .+.+||+++++||+|+||+||+|++..+|+.||||++++..   ...+.+.+|+.+|+.++|+|+   
T Consensus         3 ~~~~~~~~~~~~~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~i---   79 (348)
T d2gfsa1           3 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---   79 (348)
T ss_dssp             CEEEEECSSSEEEEETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTB---
T ss_pred             CcEEEecCCccccCCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCe---
Confidence            456666544   23589999999999999999999999999999999997532   344567899999999998887   


Q ss_pred             ceEEecceecc------CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEE
Q 013678          154 RCVQIRNWFDY------RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL  227 (438)
Q Consensus       154 ~iv~~~~~~~~------~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli  227 (438)
                        +++++++..      ....++++++++++|.+++..+   .+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus        80 --v~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~~---~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi  154 (348)
T d2gfsa1          80 --IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV  154 (348)
T ss_dssp             --CCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred             --eeEEEEEeeccccccCceEEEEEeecCCchhhhcccc---cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccc
Confidence              888888753      2345555554499999998654   59999999999999999999999999999999999999


Q ss_pred             ecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCC-CCcchhHHHHHH
Q 013678          228 VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGC  306 (438)
Q Consensus       228 ~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~  306 (438)
                      +.+|                           .+|++|||.+...........||+.|+|||++.+.. ++.++|||||||
T Consensus       155 ~~~~---------------------------~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv  207 (348)
T d2gfsa1         155 NEDC---------------------------ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC  207 (348)
T ss_dssp             CTTC---------------------------CEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHH
T ss_pred             cccc---------------------------cccccccchhcccCcccccccccccccCchhhcCCccCCcccchhhhhH
Confidence            7655                           577888888777666666678999999999988765 689999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccch-hhhh
Q 013678          307 ILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP-NLIM  385 (438)
Q Consensus       307 il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  385 (438)
                      ++|+|++|+.||.+.+.......+.+..+..+..............+...                    ..... ....
T Consensus       208 ~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~  267 (348)
T d2gfsa1         208 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS--------------------LTQMPKMNFA  267 (348)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTT--------------------SCCCCCCCHH
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhh--------------------cccCCCcchh
Confidence            99999999999999999999999999888877665432221111111000                    00000 0011


Q ss_pred             hccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCC
Q 013678          386 QHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRD  425 (438)
Q Consensus       386 ~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~  425 (438)
                      ......++++++||.+||++||++||||+|+|+||||++-
T Consensus       268 ~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~  307 (348)
T d2gfsa1         268 NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  307 (348)
T ss_dssp             HHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             hhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCC
Confidence            1234567899999999999999999999999999999864

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-54  Score=411.73  Aligned_cols=283  Identities=29%  Similarity=0.532  Sum_probs=217.5

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC--
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--  165 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~--  165 (438)
                      +++||+++++||+|+||+||+|+++.+|+.||||++++..  ...+.+.+|+.+|+.++|+++     +++++++...  
T Consensus         6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~i-----v~~~~~~~~~~~   80 (345)
T d1pmea_           6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI-----IGINDIIRAPTI   80 (345)
T ss_dssp             CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTB-----CCCCEEECCSST
T ss_pred             cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCC-----CcEEEEEeeccc
Confidence            4588999999999999999999999999999999997532  345678899999999999887     8888877643  


Q ss_pred             ---CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          166 ---NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       166 ---~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                         ..+|++|++++++|.+++..+   .+++..++.++.||+.||+|||++|||||||||+|||++.++           
T Consensus        81 ~~~~~~~l~~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~-----------  146 (345)
T d1pmea_          81 EQMKDVYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----------  146 (345)
T ss_dssp             TTCCCEEEEEECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-----------
T ss_pred             cccceEEEEEeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCC-----------
Confidence               357777776699999999765   599999999999999999999999999999999999997666           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCC------CCcccccCCCcchhHHHhC-CCCCcchhHHHHHHHHHHHHhCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGE  315 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~  315 (438)
                                      .+||+|||+|.....      .....+||+.|+|||++.. ..++.++||||+||++|+|++|+
T Consensus       147 ----------------~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~  210 (345)
T d1pmea_         147 ----------------DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR  210 (345)
T ss_dssp             ----------------CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSS
T ss_pred             ----------------CEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCC
Confidence                            456666666644322      1233579999999999854 46789999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhh-hhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADR-RAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGD  394 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (438)
                      .||.+.+..+....+....+.++......... ....+...     .+.               .............+.+
T Consensus       211 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---------------~~~~~~~~~~~~~s~~  270 (345)
T d1pmea_         211 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS-----LPH---------------KNKVPWNRLFPNADSK  270 (345)
T ss_dssp             CSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHT-----SCC---------------CCCCCHHHHCTTSCHH
T ss_pred             CCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhccccc-----CCc---------------cCCCCHHHhCCCCCHH
Confidence            99999998888888888777766543221110 00000000     000               0000111233456788


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhcCCCCCCCCC
Q 013678          395 LIDLLQGLLRYDPAERLKAREALRHPFFTRDVR  427 (438)
Q Consensus       395 l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~  427 (438)
                      +++||.+||++||++||||+|+|+||||++...
T Consensus       271 ~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~  303 (345)
T d1pmea_         271 ALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD  303 (345)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred             HHHHHHHHccCChhHCcCHHHHhcCHhhccCCC
Confidence            999999999999999999999999999996543

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-55  Score=407.11  Aligned_cols=251  Identities=25%  Similarity=0.387  Sum_probs=205.9

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      .++|++.++||+|+||.||+|+++ +++.||||+++......+.+.+|+.++.+++|+||     |++++++.+ +.++|
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnI-----v~~~g~~~~-~~~~i   84 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL-----VRLYAVVTQ-EPIYI   84 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTB-----CCEEEEECS-SSCEE
T ss_pred             HHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCE-----eEEEeeecc-CCeEE
Confidence            368999999999999999999975 67789999998766677889999999999998887     999998765 56799


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||| +|+|.+++.......+++..+..|+.||+.||+|||++||+||||||+|||++.++                  
T Consensus        85 v~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~------------------  146 (272)
T d1qpca_          85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL------------------  146 (272)
T ss_dssp             EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS------------------
T ss_pred             EEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeeccc------------------
Confidence            99999 99999987654434699999999999999999999999999999999999997665                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhC-CCCCCCCChH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG-EALFQTHENL  324 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg-~~pf~~~~~~  324 (438)
                               .+||+|||+|+......    ....||+.|+|||++.+..++.++|||||||++|||+|| .+||...+..
T Consensus       147 ---------~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~  217 (272)
T d1qpca_         147 ---------SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP  217 (272)
T ss_dssp             ---------CEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             ---------ceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHH
Confidence                     56677777766543322    235789999999999998999999999999999999995 5556655555


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +....+....                       +                          ...+..+++++.+||.+||+
T Consensus       218 ~~~~~i~~~~-----------------------~--------------------------~~~p~~~~~~l~~li~~cl~  248 (272)
T d1qpca_         218 EVIQNLERGY-----------------------R--------------------------MVRPDNCPEELYQLMRLCWK  248 (272)
T ss_dssp             HHHHHHHTTC-----------------------C--------------------------CCCCTTCCHHHHHHHHHHTC
T ss_pred             HHHHHHHhcC-----------------------C--------------------------CCCcccChHHHHHHHHHHcC
Confidence            5444443211                       0                          01123457789999999999


Q ss_pred             cCCCCCCCHHHHhc--CCCCCC
Q 013678          405 YDPAERLKAREALR--HPFFTR  424 (438)
Q Consensus       405 ~dP~~Rpta~ell~--hp~f~~  424 (438)
                      .||++|||++||++  |+||+.
T Consensus       249 ~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         249 ERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCHhHCcCHHHHHHHhhhhhhc
Confidence            99999999999998  788853

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-54  Score=404.89  Aligned_cols=278  Identities=29%  Similarity=0.463  Sum_probs=220.0

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      +||+++++||+|+||+||+|++..+++.||||+++...   .....+.+|+.+++.++|+||     +++++++.+....
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~ni-----v~~~~~~~~~~~~   76 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI-----VRLHDVLHSDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTB-----CCEEEEEECSSEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCE-----Eeeccccccccce
Confidence            58999999999999999999999999999999996432   345778899999999988877     9999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      ++||+++ +++|..++...  ..+++..++.++.|++.||+|||++||+||||||+|||++.++                
T Consensus        77 ~iv~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~----------------  138 (292)
T d1unla_          77 TLVFEFCDQDLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG----------------  138 (292)
T ss_dssp             EEEEECCSEEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC----------------
T ss_pred             eEEeeeccccccccccccc--cccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCC----------------
Confidence            9999999 77777777655  3789999999999999999999999999999999999996654                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCCC---cccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHhCCCCC-CCCC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALF-QTHE  322 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf-~~~~  322 (438)
                                 .+||+|||.|.......   ....++..|+|||++.+.. ++.++|||||||++|||++|..|| .+.+
T Consensus       139 -----------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~  207 (292)
T d1unla_         139 -----------ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND  207 (292)
T ss_dssp             -----------CEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS
T ss_pred             -----------ceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCC
Confidence                       57777777776544332   2346788999999998765 689999999999999999999885 5666


Q ss_pred             hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHc
Q 013678          323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGL  402 (438)
Q Consensus       323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~  402 (438)
                      ..+.+..+....+.++.............       ...+.              ..............++.+.+||.+|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~--------------~~~~~~~~~~~~~~s~~~~dll~~m  266 (292)
T d1unla_         208 VDDQLKRIFRLLGTPTEEQWPSMTKLPDY-------KPYPM--------------YPATTSLVNVVPKLNATGRDLLQNL  266 (292)
T ss_dssp             HHHHHHHHHHHHCCCCTTTCTTGGGSTTC-------CCCCC--------------CCTTCCCTTTSTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcCCCChhhhhhhhhcccc-------ccccc--------------ccccchhhhccccCCHHHHHHHHHH
Confidence            67778888887777654322111110000       00000              0000111223345678899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCC
Q 013678          403 LRYDPAERLKAREALRHPFFTR  424 (438)
Q Consensus       403 L~~dP~~Rpta~ell~hp~f~~  424 (438)
                      |++||.+||||+|+|+||||++
T Consensus       267 L~~dP~~R~sa~e~L~Hp~f~~  288 (292)
T d1unla_         267 LKCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             SCSSGGGSCCHHHHTTSGGGSS
T ss_pred             ccCChhHCcCHHHHhcChhhcC
Confidence            9999999999999999999986

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.8e-54  Score=401.59  Aligned_cols=253  Identities=23%  Similarity=0.300  Sum_probs=200.8

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      .+.++|++.+.||+|+||+||+|++..+|+.||||+++..    ....+.+.+|+.+++.++|+||     +++++++..
T Consensus         4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpni-----v~~~~~~~~   78 (277)
T d1o6ya_           4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI-----VAVYDTGEA   78 (277)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEEEE
T ss_pred             CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCC-----Ccccceeee
Confidence            4678999999999999999999999999999999999743    2344568899999999988887     999998875


Q ss_pred             CC----eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 013678          165 RN----HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (438)
Q Consensus       165 ~~----~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~  239 (438)
                      .+    .+||||||| |++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||++.++..      
T Consensus        79 ~~~~~~~~~lvmE~~~g~~L~~~~~~~~--~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~------  150 (277)
T d1o6ya_          79 ETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV------  150 (277)
T ss_dssp             ECSSSEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCE------
T ss_pred             ccCCCceEEEEEECCCCCEehhhhcccC--CCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccc------
Confidence            43    589999999 899999998765  79999999999999999999999999999999999999877754      


Q ss_pred             ccccCCCCCCcccCCCCCCCeEEecCCCCcccCC------CCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh
Q 013678          240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS  313 (438)
Q Consensus       240 l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt  313 (438)
                                           +|+|||.+.....      .....+||+.|+|||++.+..++.++|||||||++|+|+|
T Consensus       151 ---------------------~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyellt  209 (277)
T d1o6ya_         151 ---------------------KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT  209 (277)
T ss_dssp             ---------------------EECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ---------------------eeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHh
Confidence                                 5555554433211      2233589999999999999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchh
Q 013678          314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAG  393 (438)
Q Consensus       314 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (438)
                      |+.||.+.+..+....+......+|                                              ......+++
T Consensus       210 G~~Pf~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~s~  243 (277)
T d1o6ya_         210 GEPPFTGDSPVSVAYQHVREDPIPP----------------------------------------------SARHEGLSA  243 (277)
T ss_dssp             SSCSCCCSSHHHHHHHHHHCCCCCG----------------------------------------------GGTSSSCCH
T ss_pred             CCCCCCCcCHHHHHHHHHhcCCCCC----------------------------------------------chhccCCCH
Confidence            9999998877766555443211111                                              112245678


Q ss_pred             HHHHHHHHccccCCCCCC-CHHHHhcCCCC
Q 013678          394 DLIDLLQGLLRYDPAERL-KAREALRHPFF  422 (438)
Q Consensus       394 ~l~~ll~~~L~~dP~~Rp-ta~ell~hp~f  422 (438)
                      ++.+||.+||+.||++|| |+++++ |+|.
T Consensus       244 ~l~~li~~~L~~dp~~R~~sa~~l~-~~l~  272 (277)
T d1o6ya_         244 DLDAVVLKALAKNPENRYQTAAEMR-ADLV  272 (277)
T ss_dssp             HHHHHHHHHTCSSGGGSCSSHHHHH-HHHH
T ss_pred             HHHHHHHHHccCCHhHCHhHHHHHH-HHHH
Confidence            999999999999999999 566654 5553

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-54  Score=397.63  Aligned_cols=245  Identities=20%  Similarity=0.321  Sum_probs=208.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      ++|++.++||+|+||+||+|+++ +++.||||+++......+.+.+|+.++.+++|+||     +++++++.+.+.+++|
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnI-----v~~~g~~~~~~~~~iv   77 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKL-----VQLYGVCTKQRPIFII   77 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTB-----CCEEEEECCSSSEEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCce-----eeEEEEEeeCCceEEE
Confidence            46889999999999999999984 77889999998877777889999999999998877     9999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||+ +|+|.+++.... ..+++..+.+++.||++||+|||++||+||||||+|||++.++                   
T Consensus        78 ~Ey~~~g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~-------------------  137 (258)
T d1k2pa_          78 TEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG-------------------  137 (258)
T ss_dssp             EECCTTEEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTC-------------------
T ss_pred             EEccCCCcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCC-------------------
Confidence            9999 899999976544 4689999999999999999999999999999999999997665                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCCC----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE  325 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~  325 (438)
                              .+||+|||++.......    ....||..|+|||++.+..++.++|||||||++|||+| |+.||.+.+..+
T Consensus       138 --------~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~  209 (258)
T d1k2pa_         138 --------VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE  209 (258)
T ss_dssp             --------CEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH
T ss_pred             --------cEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH
Confidence                    46666666665433221    22468999999999999999999999999999999998 899999888777


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      ....+.+....                                                 ..+...++++.+||.+||+.
T Consensus       210 ~~~~i~~~~~~-------------------------------------------------~~p~~~~~~l~~li~~cl~~  240 (258)
T d1k2pa_         210 TAEHIAQGLRL-------------------------------------------------YRPHLASEKVYTIMYSCWHE  240 (258)
T ss_dssp             HHHHHHTTCCC-------------------------------------------------CCCTTCCHHHHHHHHHTTCS
T ss_pred             HHHHHHhCCCC-------------------------------------------------CCcccccHHHHHHHHHHccC
Confidence            66555432110                                                 11234567899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q 013678          406 DPAERLKAREALRH  419 (438)
Q Consensus       406 dP~~Rpta~ell~h  419 (438)
                      ||++|||++|+++|
T Consensus       241 dP~~RPt~~eil~~  254 (258)
T d1k2pa_         241 KADERPTFKILLSN  254 (258)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             CHhHCcCHHHHHHH
Confidence            99999999999987

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-55  Score=402.28  Aligned_cols=248  Identities=23%  Similarity=0.325  Sum_probs=197.9

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCe
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~  167 (438)
                      .++|++.++||+|+||+||+|+..   ..||||+++.   .....+.+.+|+.++.+++|+||     +++++++.. +.
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnI-----v~~~~~~~~-~~   77 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI-----LLFMGYSTA-PQ   77 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTB-----CCEEEEECS-SS
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCE-----eeeeEEEec-cE
Confidence            467899999999999999999753   3599999864   23455778899999999988887     999998754 56


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCC
Q 013678          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK  246 (438)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~  246 (438)
                      ++|||||| +|+|.+++.... ..+++..+..++.||+.||+|||++|||||||||+|||++.++               
T Consensus        78 ~~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~---------------  141 (276)
T d1uwha_          78 LAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL---------------  141 (276)
T ss_dssp             CEEEEECCCEEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTS---------------
T ss_pred             EEEEEecCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCC---------------
Confidence            89999999 899999997654 4699999999999999999999999999999999999997766               


Q ss_pred             CCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCC---CCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                                  .+||+|||+|......     .....||+.|||||++.+.   .++.++|||||||++|||+||+.||
T Consensus       142 ------------~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf  209 (276)
T d1uwha_         142 ------------TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY  209 (276)
T ss_dssp             ------------SEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ------------CEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCC
Confidence                        4666777766554321     2235799999999999753   4899999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      .+.+....+..+.......|.                                            .......+++++.+|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~p~--------------------------------------------~~~~~~~~~~~l~~l  245 (276)
T d1uwha_         210 SNINNRDQIIFMVGRGYLSPD--------------------------------------------LSKVRSNCPKAMKRL  245 (276)
T ss_dssp             TTCCCHHHHHHHHHHTSCCCC--------------------------------------------GGGSCTTCCHHHHHH
T ss_pred             CCCChHHHHHHHHhcCCCCCc--------------------------------------------chhccccchHHHHHH
Confidence            887766555444332111110                                            112234567899999


Q ss_pred             HHHccccCCCCCCCHHHHhcC
Q 013678          399 LQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~h  419 (438)
                      |.+||+.||++|||++||++|
T Consensus       246 i~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         246 MAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCHhHCcCHHHHHHH
Confidence            999999999999999999976

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.2e-54  Score=404.48  Aligned_cols=247  Identities=23%  Similarity=0.334  Sum_probs=196.6

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCc---EEEEEEeec--chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .++|++.+.||+|+||+||+|+++.+++   .||||.+..  .....+.+.+|+.+|++++|+||     |++++++.++
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnI-----v~l~g~~~~~   99 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV-----IHLEGVVTKS   99 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEECSS
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCC-----ccEEEEEeeC
Confidence            3679999999999999999999887664   588998864  23455678999999999988887     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.++|||||| +|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++             
T Consensus       100 ~~~~iv~Ey~~~g~L~~~~~~~~-~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~-------------  165 (299)
T d1jpaa_         100 TPVMIITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNL-------------  165 (299)
T ss_dssp             SSCEEEEECCTTEEHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-------------
T ss_pred             CEEEEEEEecCCCcceeeecccc-CCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCC-------------
Confidence            9999999999 999999887654 4699999999999999999999999999999999999997766             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC--------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE  315 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~  315 (438)
                                    .+||+|||+|+......        ....||+.|||||++.+..++.++|||||||++|||+| |.
T Consensus       166 --------------~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~  231 (299)
T d1jpaa_         166 --------------VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE  231 (299)
T ss_dssp             --------------CEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             --------------cEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCC
Confidence                          45666666655432211        11357899999999999999999999999999999998 89


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      .||.+.+..+.+..+......                                                 ..+..+++++
T Consensus       232 ~Pf~~~~~~~~~~~i~~~~~~-------------------------------------------------~~~~~~~~~l  262 (299)
T d1jpaa_         232 RPYWDMTNQDVINAIEQDYRL-------------------------------------------------PPPMDCPSAL  262 (299)
T ss_dssp             CTTTTCCHHHHHHHHHTTCCC-------------------------------------------------CCCTTCCHHH
T ss_pred             CCCCCCCHHHHHHHHHcCCCC-------------------------------------------------CCCccchHHH
Confidence            999988877666555331100                                                 1123457789


Q ss_pred             HHHHHHccccCCCCCCCHHHHhcC
Q 013678          396 IDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      .+||.+||+.||++|||+.||+++
T Consensus       263 ~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         263 HQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHcCCCHhHCcCHHHHHHH
Confidence            999999999999999999998764

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5e-53  Score=407.42  Aligned_cols=324  Identities=28%  Similarity=0.461  Sum_probs=248.1

Q ss_pred             ceeeecCCccC-CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCC------CCc
Q 013678           81 HYVFAIGENLT-PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI------GGT  153 (438)
Q Consensus        81 ~~~~~~~~~~~-~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i------~~~  153 (438)
                      +|++.+|+.+. +||+++++||+|+||+||+|++..+|+.||||++++.....+...+|+.+++.+.|+++      .++
T Consensus         1 ~~p~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~   80 (362)
T d1q8ya_           1 YHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGAN   80 (362)
T ss_dssp             CCCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHT
T ss_pred             CCCCCCCCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcC
Confidence            46788899887 68999999999999999999999999999999998876667788999999999999875      357


Q ss_pred             ceEEecceecc--CCeEEEEEccC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEe
Q 013678          154 RCVQIRNWFDY--RNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLV  228 (438)
Q Consensus       154 ~iv~~~~~~~~--~~~~~lv~e~~--~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIli~  228 (438)
                      |++++++++..  ....+++|+++  +++............+++..++.++.||+.||+|||+ +||+||||||+||||+
T Consensus        81 ~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~  160 (362)
T d1q8ya_          81 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME  160 (362)
T ss_dssp             TBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEE
T ss_pred             ceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeee
Confidence            88999998864  34566666665  5566666665555789999999999999999999998 8999999999999998


Q ss_pred             cCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHH
Q 013678          229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL  308 (438)
Q Consensus       229 ~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il  308 (438)
                      .++..                     .....++++|||.|..........+||+.|+|||++.+..++.++||||+||++
T Consensus       161 ~~~~~---------------------~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il  219 (362)
T d1q8ya_         161 IVDSP---------------------ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLI  219 (362)
T ss_dssp             EEETT---------------------TTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHH
T ss_pred             ccCcc---------------------cccceeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHH
Confidence            76521                     112358999999998877777778999999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCC------hHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchh
Q 013678          309 VELCSGEALFQTHE------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN  382 (438)
Q Consensus       309 ~elltg~~pf~~~~------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (438)
                      ++|++|+.||...+      ..+.+..+...+|..|..+..........+................ ......       
T Consensus       220 ~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------  291 (362)
T d1q8ya_         220 FELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWP-LEDVLT-------  291 (362)
T ss_dssp             HHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCC-HHHHHH-------
T ss_pred             HHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCc-hhhhcc-------
Confidence            99999999996543      3456777788899999877655443333332222222222211111 111110       


Q ss_pred             hhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcCCCCCCCCCCceeee
Q 013678          383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRHPFFTRDVRRPTLLV  433 (438)
Q Consensus       383 ~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~hp~f~~~~~~~~~~~  433 (438)
                      .........++++.|||.+||++||.+||||+|+|+||||++.......-+
T Consensus       292 ~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~~~~~~~~  342 (362)
T d1q8ya_         292 EKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV  342 (362)
T ss_dssp             HTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTCTTCCC
T ss_pred             cccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCCCcccCCC
Confidence            011222345678999999999999999999999999999997655444333

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=4.9e-54  Score=408.63  Aligned_cols=284  Identities=25%  Similarity=0.480  Sum_probs=212.5

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHH-hcCCCCcceEEecceecc--CCeE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDY--RNHI  168 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~--~~~~  168 (438)
                      ++|+++++||+|+||+||+|++..+|+.||||+++...  .+.+.+|+.+|+.+. |+||     ++++++|..  ...+
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~Ei~il~~l~~hpnI-----v~~~~~~~~~~~~~~  107 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLRGGPNI-----ITLADIVKDPVSRTP  107 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC--HHHHHHHHHHHHHHTTSTTB-----CCEEEEEECTTTCSE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH--HHHHHHHHHHHHhccCCCCC-----cEEEEEEEecCCCce
Confidence            68999999999999999999999999999999997533  466889999999996 6666     999999874  4679


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      ++||||| +++|.++.     +.+++..++.++.||+.||+|||++||+||||||+||||+.++                
T Consensus       108 ~~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~----------------  166 (328)
T d3bqca1         108 ALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH----------------  166 (328)
T ss_dssp             EEEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT----------------
T ss_pred             eEEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCC----------------
Confidence            9999999 88887653     3699999999999999999999999999999999999997543                


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCC--CCcccccCCCcchhHHHhCCC-CCcchhHHHHHHHHHHHHhCCCCCCCC-Ch
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTH-EN  323 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~-~~  323 (438)
                                ..+||+|||+|.....  .....+||+.|+|||.+.+.. ++.++||||+||++|+|++|..||... +.
T Consensus       167 ----------~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~  236 (328)
T d3bqca1         167 ----------RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN  236 (328)
T ss_dssp             ----------TEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred             ----------CeeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchh
Confidence                      2467777777765433  234468899999999988764 799999999999999999999999654 45


Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcc
Q 013678          324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLL  403 (438)
Q Consensus       324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L  403 (438)
                      .++...+...+|............     ...................        ...........+++++.|||++||
T Consensus       237 ~~~~~~i~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~s~~~~dli~~mL  303 (328)
T d3bqca1         237 YDQLVRIAKVLGTEDLYDYIDKYN-----IELDPRFNDILGRHSRKRW--------ERFVHSENQHLVSPEALDFLDKLL  303 (328)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHTT-----CCCCGGGGGTCCCCCCCCG--------GGGCCTTTGGGCCHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHCCchhhhhhhhcc-----cccCcccchhcccccccch--------hhcccccccccCCHHHHHHHHHHc
Confidence            566666777666432211111000     0000000000000000000        000011122345788999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCC
Q 013678          404 RYDPAERLKAREALRHPFFTRDV  426 (438)
Q Consensus       404 ~~dP~~Rpta~ell~hp~f~~~~  426 (438)
                      ++||++||||+|+|+||||++..
T Consensus       304 ~~dP~~R~ta~e~L~Hp~F~~v~  326 (328)
T d3bqca1         304 RYDHQSRLTAREAMEHPYFYTVV  326 (328)
T ss_dssp             CSSGGGSCCHHHHHTSGGGTTSC
T ss_pred             cCChhHCcCHHHHhcCcccCCCC
Confidence            99999999999999999999754

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-54  Score=408.29  Aligned_cols=248  Identities=19%  Similarity=0.290  Sum_probs=200.4

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCc-----EEEEEEeecc--hhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceec
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKE-----LVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~  163 (438)
                      ++|++.++||+|+||+||+|++..+++     .||+|++...  ......+.+|+.++.++ +|+||     |++++++.
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnI-----v~l~~~~~  111 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI-----VNLLGACT  111 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTB-----CCEEEEEC
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcE-----eEEEEEEe
Confidence            689999999999999999999876543     6999998642  33456788999999999 77777     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSY---------------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLK  221 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk  221 (438)
                      +.+.+||||||| +|+|.+++..+..                     ..+++..++.|+.||+.||+|||++||||||||
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlK  191 (325)
T d1rjba_         112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA  191 (325)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred             eCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCc
Confidence            999999999999 9999999976431                     358999999999999999999999999999999


Q ss_pred             CCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCC
Q 013678          222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWN  296 (438)
Q Consensus       222 p~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~  296 (438)
                      |+|||++.++.                           +||+|||+|+......     ....||+.|||||++.+..++
T Consensus       192 p~Nill~~~~~---------------------------~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  244 (325)
T d1rjba_         192 ARNVLVTHGKV---------------------------VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYT  244 (325)
T ss_dssp             GGGEEEETTTE---------------------------EEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCC
T ss_pred             hhccccccCCe---------------------------EEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCC
Confidence            99999987765                           5555555554432221     234689999999999999999


Q ss_pred             cchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHH
Q 013678          297 YPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW  375 (438)
Q Consensus       297 ~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (438)
                      .++|||||||++|||+| |..||.+.+....+..+...-.                      +.                
T Consensus       245 ~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~----------------------~~----------------  286 (325)
T d1rjba_         245 IKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGF----------------------KM----------------  286 (325)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTC----------------------CC----------------
T ss_pred             cceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC----------------------CC----------------
Confidence            99999999999999998 8999988766555444432110                      11                


Q ss_pred             HhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          376 KLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                                ..+..+++++.+||.+||+.||++|||++||++|
T Consensus       287 ----------~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         287 ----------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             ----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                      1223457789999999999999999999999976

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-54  Score=399.20  Aligned_cols=249  Identities=25%  Similarity=0.356  Sum_probs=201.8

Q ss_pred             CceEEEe-eeeeecceEEEEEEECC--CCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC
Q 013678           92 PRCKILS-KMGEGTFGQVVECFDNE--KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        92 ~~y~~~~-~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ++|.+.+ +||+|+||.||+|.++.  ++..||||+++..  ....+.+.+|+.+|++++|+||     |++++++.+ +
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~l~g~~~~-~   81 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI-----VRLIGVCQA-E   81 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEES-S
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCE-----eeEeeeecc-C
Confidence            5678888 49999999999998754  4557999999753  3445778999999999998887     999999875 4


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS  245 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~  245 (438)
                      .+||||||| +|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.             
T Consensus        82 ~~~lvmE~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~-------------  147 (285)
T d1u59a_          82 ALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHY-------------  147 (285)
T ss_dssp             SEEEEEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTE-------------
T ss_pred             eEEEEEEeCCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCc-------------
Confidence            689999999 899999986543 46999999999999999999999999999999999999988775             


Q ss_pred             CCCCcccCCCCCCCeEEecCCCCcccCCC------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCC
Q 013678          246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALF  318 (438)
Q Consensus       246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf  318 (438)
                                    +||+|||+|+.....      .....||+.|+|||++.+..++.++|||||||++|||+| |..||
T Consensus       148 --------------~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf  213 (285)
T d1u59a_         148 --------------AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPY  213 (285)
T ss_dssp             --------------EEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             --------------eeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCC
Confidence                          455555555443222      123468999999999999999999999999999999998 99999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      .+.+..+....+.+..                       +.                          ..+..+++++.+|
T Consensus       214 ~~~~~~~~~~~i~~~~-----------------------~~--------------------------~~p~~~~~~l~~l  244 (285)
T d1u59a_         214 KKMKGPEVMAFIEQGK-----------------------RM--------------------------ECPPECPPELYAL  244 (285)
T ss_dssp             TTCCTHHHHHHHHTTC-----------------------CC--------------------------CCCTTCCHHHHHH
T ss_pred             CCCCHHHHHHHHHcCC-----------------------CC--------------------------CCCCcCCHHHHHH
Confidence            9887766655543211                       11                          1223567799999


Q ss_pred             HHHccccCCCCCCCHHHH---hcCCCCC
Q 013678          399 LQGLLRYDPAERLKAREA---LRHPFFT  423 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~el---l~hp~f~  423 (438)
                      |.+||+.||++|||+.+|   |+|+|++
T Consensus       245 i~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         245 MSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             HHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            999999999999999888   6777763

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-54  Score=398.52  Aligned_cols=241  Identities=25%  Similarity=0.390  Sum_probs=193.8

Q ss_pred             eeeeeecceEEEEEEEC--CCCcEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEE
Q 013678           98 SKMGEGTFGQVVECFDN--EKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (438)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~  172 (438)
                      ++||+|+||+||+|.+.  .+++.||||+++..   ....+.+.+|+.+|++++|+||     |++++++++ +..+|||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~~~g~~~~-~~~~lvm   86 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI-----VRMIGICEA-ESWMLVM   86 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTB-----CCEEEEEES-SSEEEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCC-----ceEEEEecc-CCEEEEE
Confidence            46999999999999754  45678999999642   2345678999999999988887     999999875 4578999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCcc
Q 013678          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF  251 (438)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~~  251 (438)
                      ||| +|+|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++.+                  
T Consensus        87 E~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~------------------  146 (277)
T d1xbba_          87 EMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA------------------  146 (277)
T ss_dssp             ECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEE------------------
T ss_pred             EcCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcc------------------
Confidence            999 999999998765  79999999999999999999999999999999999999887754                  


Q ss_pred             cCCCCCCCeEEecCCCCcccCCC------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 013678          252 KNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL  324 (438)
Q Consensus       252 ~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~  324 (438)
                               ||+|||+|+.....      .....||+.|+|||++.+..++.++|||||||++|||++ |+.||.+.+..
T Consensus       147 ---------kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~  217 (277)
T d1xbba_         147 ---------KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS  217 (277)
T ss_dssp             ---------EECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             ---------cccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH
Confidence                     55555555433221      122468999999999999999999999999999999998 89999988776


Q ss_pred             HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccc
Q 013678          325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLR  404 (438)
Q Consensus       325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  404 (438)
                      +....+.+.  .                     +.                          ..+..+++++.+||.+||+
T Consensus       218 ~~~~~i~~~--~---------------------~~--------------------------~~p~~~~~~~~~li~~cl~  248 (277)
T d1xbba_         218 EVTAMLEKG--E---------------------RM--------------------------GCPAGCPREMYDLMNLCWT  248 (277)
T ss_dssp             HHHHHHHTT--C---------------------CC--------------------------CCCTTCCHHHHHHHHHHTC
T ss_pred             HHHHHHHcC--C---------------------CC--------------------------CCCcccCHHHHHHHHHHcC
Confidence            655544321  0                     11                          1123457789999999999


Q ss_pred             cCCCCCCCHHHH---hcCCCC
Q 013678          405 YDPAERLKAREA---LRHPFF  422 (438)
Q Consensus       405 ~dP~~Rpta~el---l~hp~f  422 (438)
                      .||++|||+++|   |+|+|+
T Consensus       249 ~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         249 YDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             SSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCHhHCcCHHHHHHHhhCHHh
Confidence            999999999998   456554

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-54  Score=397.18  Aligned_cols=252  Identities=26%  Similarity=0.347  Sum_probs=204.3

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv  171 (438)
                      ++|++.++||+|+||.||+|++..+ +.||||+++......+.+.+|+.++++++|+||     |++++++.+ +.+++|
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nI-----v~~~g~~~~-~~~~lv   89 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL-----VQLYAVVSE-EPIYIV   89 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTB-----CCEEEEECS-SSCEEE
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCCHHHHHHHHHHHHhcccCCE-----eEEEEEEec-CCeEEE
Confidence            6899999999999999999998655 569999998776677889999999999999887     999999865 567899


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCCc
Q 013678          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY  250 (438)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~~  250 (438)
                      |||| +|+|.+++.......+++..+..++.||+.||+|||++||+||||||+||||+.++                   
T Consensus        90 ~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~-------------------  150 (285)
T d1fmka3          90 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL-------------------  150 (285)
T ss_dssp             ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-------------------
T ss_pred             EEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCC-------------------
Confidence            9999 99999998765445799999999999999999999999999999999999998766                   


Q ss_pred             ccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCC-CCCCCCChHH
Q 013678          251 FKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE-ALFQTHENLE  325 (438)
Q Consensus       251 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~-~pf~~~~~~~  325 (438)
                              .+||+|||+|+.....    .....||+.|+|||++.+..++.++|||||||++|||++|. +|+.+....+
T Consensus       151 --------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~  222 (285)
T d1fmka3         151 --------VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE  222 (285)
T ss_dssp             --------CEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred             --------cEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHH
Confidence                    4666666666543222    12257899999999999999999999999999999999965 4555555555


Q ss_pred             HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHcccc
Q 013678          326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRY  405 (438)
Q Consensus       326 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~  405 (438)
                      .+..+.+...                                                 ...+..+++++.+||.+||+.
T Consensus       223 ~~~~i~~~~~-------------------------------------------------~~~~~~~~~~l~~li~~cl~~  253 (285)
T d1fmka3         223 VLDQVERGYR-------------------------------------------------MPCPPECPESLHDLMCQCWRK  253 (285)
T ss_dssp             HHHHHHTTCC-------------------------------------------------CCCCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHhcCC-------------------------------------------------CCCCcccCHHHHHHHHHHccc
Confidence            5544432110                                                 112235677899999999999


Q ss_pred             CCCCCCCHHHHhc--CCCCCCCC
Q 013678          406 DPAERLKAREALR--HPFFTRDV  426 (438)
Q Consensus       406 dP~~Rpta~ell~--hp~f~~~~  426 (438)
                      ||++|||+++|++  |+||+...
T Consensus       254 dP~~Rps~~~i~~~L~~~~~~~~  276 (285)
T d1fmka3         254 EPEERPTFEYLQAFLEDYFTSTE  276 (285)
T ss_dssp             SGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             CHhHCcCHHHHHHHHhhhhcCCC
Confidence            9999999999998  99997753

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-53  Score=401.88  Aligned_cols=254  Identities=26%  Similarity=0.392  Sum_probs=206.3

Q ss_pred             CceEEEeeeeeecceEEEEEEE---CCCCcEEEEEEeecc-----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           92 PRCKILSKMGEGTFGQVVECFD---NEKKELVAIKIVRSI-----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~---~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      ++|+++++||+|+||+||+|++   ..+|+.||||++++.     ....+.+.+|+.++++++|+    +||++++++++
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~----pnIv~~~~~~~   99 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS----PFLVTLHYAFQ   99 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTC----TTBCCEEEEEE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCC----CeEEEeeeeec
Confidence            6799999999999999999987   447899999998642     23456678999999999984    23499999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS  242 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~  242 (438)
                      +...+++||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|           
T Consensus       100 ~~~~~~~v~e~~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~-----------  166 (322)
T d1vzoa_         100 TETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG-----------  166 (322)
T ss_dssp             ETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS-----------
T ss_pred             cCCceeeeeecccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCC-----------
Confidence            999999999999 999999998775  688999999999999999999999999999999999997766           


Q ss_pred             cCCCCCCcccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCCC--CCcchhHHHHHHHHHHHHhCCC
Q 013678          243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLG--WNYPCDLWSVGCILVELCSGEA  316 (438)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltg~~  316 (438)
                                      .+||+|||++......    .....|++.|+|||.+.+..  ++.++|||||||+||+|++|..
T Consensus       167 ----------------~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~  230 (322)
T d1vzoa_         167 ----------------HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS  230 (322)
T ss_dssp             ----------------CEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSC
T ss_pred             ----------------CEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCC
Confidence                            4666666666543221    23357899999999998654  6889999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||.+.+..+....+.+...                                              ......+..+++++.
T Consensus       231 PF~~~~~~~~~~~i~~~~~----------------------------------------------~~~~~~~~~~s~~~~  264 (322)
T d1vzoa_         231 PFTVDGEKNSQAEISRRIL----------------------------------------------KSEPPYPQEMSALAK  264 (322)
T ss_dssp             TTSCTTSCCCHHHHHHHHH----------------------------------------------HCCCCCCTTSCHHHH
T ss_pred             CCCCCCHHHHHHHHHHhcc----------------------------------------------cCCCCCcccCCHHHH
Confidence            9987655443333322110                                              000112235678999


Q ss_pred             HHHHHccccCCCCCC-----CHHHHhcCCCCCC
Q 013678          397 DLLQGLLRYDPAERL-----KAREALRHPFFTR  424 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rp-----ta~ell~hp~f~~  424 (438)
                      +||.+||++||++||     ||+|+++||||++
T Consensus       265 ~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~  297 (322)
T d1vzoa_         265 DLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  297 (322)
T ss_dssp             HHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             HHHHHHcccCHHHcCCCCcccHHHHHcCHhhcC
Confidence            999999999999999     5999999999986

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-52  Score=388.54  Aligned_cols=246  Identities=24%  Similarity=0.327  Sum_probs=195.7

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCC---CcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      .++|++.+.||+|+||.||+|++..+   +..||||.++..  ....+.+.+|+.++++++||||     +++++++.+ 
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnI-----v~l~~~~~~-   79 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI-----VKLIGVITE-   79 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEECS-
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEec-
Confidence            36899999999999999999998654   356899988642  3445678899999999988877     999999864 


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +.+|+||||| +|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.            
T Consensus        80 ~~~~iv~E~~~~g~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~------------  146 (273)
T d1mp8a_          80 NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC------------  146 (273)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE------------
T ss_pred             CeEEEEEEeccCCcHHhhhhccC-CCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCc------------
Confidence            6789999999 999999887654 47999999999999999999999999999999999999987764            


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQ  319 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~  319 (438)
                                     +||+|||+|+.....    .....||+.|+|||++.+..++.++|||||||++|||++ |.+||.
T Consensus       147 ---------------~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~  211 (273)
T d1mp8a_         147 ---------------VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ  211 (273)
T ss_dssp             ---------------EEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred             ---------------EEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCC
Confidence                           556666665543221    123468999999999999999999999999999999998 899998


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      +.+..+....+....                       +                          ...+..+++++.+||
T Consensus       212 ~~~~~~~~~~i~~~~-----------------------~--------------------------~~~~~~~~~~~~~li  242 (273)
T d1mp8a_         212 GVKNNDVIGRIENGE-----------------------R--------------------------LPMPPNCPPTLYSLM  242 (273)
T ss_dssp             TCCGGGHHHHHHTTC-----------------------C--------------------------CCCCTTCCHHHHHHH
T ss_pred             CCCHHHHHHHHHcCC-----------------------C--------------------------CCCCCCCCHHHHHHH
Confidence            877766555443210                       0                          012235678999999


Q ss_pred             HHccccCCCCCCCHHHHhcC
Q 013678          400 QGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~h  419 (438)
                      .+||+.||++|||+.||++|
T Consensus       243 ~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         243 TKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             HHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCHhHCcCHHHHHHH
Confidence            99999999999999999875

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-51  Score=383.63  Aligned_cols=245  Identities=21%  Similarity=0.307  Sum_probs=193.4

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCC----cEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKK----ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      +.|++.+.||+|+||.||+|.++.++    ..||||+++..  ......+.+|+.++++++|+||     |++++++.+.
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nI-----v~~~g~~~~~   81 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI-----IRLEGVISKY   81 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEECSS
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCE-----eeeeEEEecC
Confidence            56899999999999999999887654    47999998643  3345568899999999988887     9999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      +..++||||| +++|.+++.... ..+++..+..++.||+.||+|||+++|+||||||+||||+.++             
T Consensus        82 ~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~-------------  147 (283)
T d1mqba_          82 KPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL-------------  147 (283)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-------------
T ss_pred             CceEEEEEecccCcchhhhhccc-ccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCC-------------
Confidence            9999999999 889999887654 4799999999999999999999999999999999999997665             


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCC-
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL-  317 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p-  317 (438)
                                    .+||+|||+|+......      ....||+.|+|||++.+..++.++|||||||++|||++|..| 
T Consensus       148 --------------~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~  213 (283)
T d1mqba_         148 --------------VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP  213 (283)
T ss_dssp             --------------CEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             --------------eEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCc
Confidence                          46666677665533221      124689999999999999999999999999999999996555 


Q ss_pred             CCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHH
Q 013678          318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLID  397 (438)
Q Consensus       318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  397 (438)
                      |...+..+.+..+....                       +                          ...+..++.++.+
T Consensus       214 ~~~~~~~~~~~~i~~~~-----------------------~--------------------------~~~~~~~~~~l~~  244 (283)
T d1mqba_         214 YWELSNHEVMKAINDGF-----------------------R--------------------------LPTPMDCPSAIYQ  244 (283)
T ss_dssp             TTTCCHHHHHHHHHTTC-----------------------C--------------------------CCCCTTCBHHHHH
T ss_pred             cccCCHHHHHHHHhccC-----------------------C--------------------------CCCchhhHHHHHH
Confidence            55445444443332210                       0                          0112345678999


Q ss_pred             HHHHccccCCCCCCCHHHHhc
Q 013678          398 LLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       398 ll~~~L~~dP~~Rpta~ell~  418 (438)
                      ||.+||+.||++|||+.||++
T Consensus       245 li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         245 LMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHCcCCHhHCcCHHHHHH
Confidence            999999999999999999976

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-53  Score=387.29  Aligned_cols=244  Identities=22%  Similarity=0.321  Sum_probs=194.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec-cCCeEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD-YRNHICI  170 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~-~~~~~~l  170 (438)
                      ++|++.++||+|+||.||+|++  +|..||||+++.. ...+.+.+|++++++++|+||     +++++++. ..+.+||
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~-~~~~~~~~E~~~l~~l~HpnI-----v~~~g~~~~~~~~~~l   78 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNL-----VQLLGVIVEEKGGLYI   78 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC-C--HHHHHTHHHHTTCCCTTB-----CCEEEEECCC--CCEE
T ss_pred             HHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcH-HHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEecCCcEEE
Confidence            5799999999999999999987  4778999999753 445778999999999988877     99999875 4567899


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      ||||+ +|+|.+++..+....+++..++.++.||+.||.|||+++|+||||||+|||++.+|                  
T Consensus        79 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~------------------  140 (262)
T d1byga_          79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN------------------  140 (262)
T ss_dssp             EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS------------------
T ss_pred             EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCC------------------
Confidence            99999 99999999765434689999999999999999999999999999999999997655                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA  328 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~  328 (438)
                               .+||+|||+++..........+|..|+|||++.+..++.++|||||||++|||+| |.+||...+..+...
T Consensus       141 ---------~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~  211 (262)
T d1byga_         141 ---------VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP  211 (262)
T ss_dssp             ---------CEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHH
T ss_pred             ---------CEeecccccceecCCCCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHH
Confidence                     5788888888776666666788999999999999999999999999999999998 788888776655544


Q ss_pred             HHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHHHHccccCCC
Q 013678          329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPA  408 (438)
Q Consensus       329 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~  408 (438)
                      .+...  .                     +                          .+.+...++++.+||.+||+.||+
T Consensus       212 ~i~~~--~---------------------~--------------------------~~~~~~~~~~~~~li~~cl~~dP~  242 (262)
T d1byga_         212 RVEKG--Y---------------------K--------------------------MDAPDGCPPAVYEVMKNCWHLDAA  242 (262)
T ss_dssp             HHTTT--C---------------------C--------------------------CCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHHcC--C---------------------C--------------------------CCCCccCCHHHHHHHHHHcccCHh
Confidence            43210  0                     1                          112335567999999999999999


Q ss_pred             CCCCHHHHhcC
Q 013678          409 ERLKAREALRH  419 (438)
Q Consensus       409 ~Rpta~ell~h  419 (438)
                      +|||+.|++++
T Consensus       243 ~Rps~~~l~~~  253 (262)
T d1byga_         243 MRPSFLQLREQ  253 (262)
T ss_dssp             GSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999999874

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-51  Score=390.09  Aligned_cols=245  Identities=21%  Similarity=0.281  Sum_probs=194.7

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCc----EEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~  165 (438)
                      ..|++++.||+|+||+||+|.+..+|+    .||+|.++..  ....+.+.+|+.++++++|+||     |++++++.++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnI-----v~l~g~~~~~   83 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV-----CRLLGICLTS   83 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTB-----CCEEEEEESS
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEecC
Confidence            469999999999999999999988876    5888887642  3456778999999999998887     9999999875


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccC
Q 013678          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS  244 (438)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~  244 (438)
                      + .+++|||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+           
T Consensus        84 ~-~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~-----------  150 (317)
T d1xkka_          84 T-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHV-----------  150 (317)
T ss_dssp             S-EEEEEECCTTCBHHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEE-----------
T ss_pred             C-eeEEEEeccCCcccccccccc-cCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCe-----------
Confidence            4 56777777 999999887654 579999999999999999999999999999999999999887755           


Q ss_pred             CCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCCCC
Q 013678          245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALF  318 (438)
Q Consensus       245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf  318 (438)
                                      ||+|||+|......     .....||+.|+|||++.+..++.++|||||||++|||+| |..||
T Consensus       151 ----------------kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~  214 (317)
T d1xkka_         151 ----------------KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY  214 (317)
T ss_dssp             ----------------EECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             ----------------EeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCC
Confidence                            55555554433221     122468999999999999999999999999999999998 89999


Q ss_pred             CCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHH
Q 013678          319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDL  398 (438)
Q Consensus       319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  398 (438)
                      .+.+..+....+....                       +                          ...+..+++++.+|
T Consensus       215 ~~~~~~~~~~~i~~~~-----------------------~--------------------------~~~p~~~~~~~~~l  245 (317)
T d1xkka_         215 DGIPASEISSILEKGE-----------------------R--------------------------LPQPPICTIDVYMI  245 (317)
T ss_dssp             TTSCGGGHHHHHHHTC-----------------------C--------------------------CCCCTTBCHHHHHH
T ss_pred             CCCCHHHHHHHHHcCC-----------------------C--------------------------CCCCcccCHHHHHH
Confidence            8776655544443211                       0                          01123457789999


Q ss_pred             HHHccccCCCCCCCHHHHhcC
Q 013678          399 LQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       399 l~~~L~~dP~~Rpta~ell~h  419 (438)
                      |.+||+.||++|||+.|+++|
T Consensus       246 i~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         246 MVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhCCCChhhCcCHHHHHHH
Confidence            999999999999999999987

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-51  Score=384.98  Aligned_cols=249  Identities=23%  Similarity=0.324  Sum_probs=190.3

Q ss_pred             CceEEEeeeeeecceEEEEEEECC-----CCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      ++|++.++||+|+||.||+|++..     +++.||||+++..  ....+.+.+|..++.++.|+    +|++.+++++..
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h----~~iv~~~~~~~~   88 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH----LNVVNLLGACTK   88 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCC----TTBCCEEEEECS
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCC----CeEEEeeeeecc
Confidence            689999999999999999999754     4578999998643  33456677888888888654    344888887654


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe
Q 013678          165 -RNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  228 (438)
Q Consensus       165 -~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~  228 (438)
                       ++.+++||||| +|+|.+++....              ...+++..+..++.||+.||+|||++|||||||||+|||++
T Consensus        89 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~  168 (299)
T d1ywna1          89 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS  168 (299)
T ss_dssp             TTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred             CCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeEC
Confidence             56799999999 999999997542              13588999999999999999999999999999999999998


Q ss_pred             cCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchhHHH
Q 013678          229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWS  303 (438)
Q Consensus       229 ~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwS  303 (438)
                      .++.                           +||+|||+|+.....     .....||+.|+|||++.+..++.++||||
T Consensus       169 ~~~~---------------------------~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS  221 (299)
T d1ywna1         169 EKNV---------------------------VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS  221 (299)
T ss_dssp             GGGC---------------------------EEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHH
T ss_pred             CCCc---------------------------EEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceee
Confidence            7764                           555555555432221     22357999999999999999999999999


Q ss_pred             HHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchh
Q 013678          304 VGCILVELCSG-EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPN  382 (438)
Q Consensus       304 lG~il~elltg-~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (438)
                      |||++|||++| ..||.+.+..+.+..+... +.                     +                        
T Consensus       222 ~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~-~~---------------------~------------------------  255 (299)
T d1ywna1         222 FGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GT---------------------R------------------------  255 (299)
T ss_dssp             HHHHHHHHHTTSCCSSTTCCCSHHHHHHHHH-TC---------------------C------------------------
T ss_pred             hHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc-CC---------------------C------------------------
Confidence            99999999986 5678776544433332221 00                     0                        


Q ss_pred             hhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          383 LIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       383 ~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                        ...+..+++++.+||.+||+.||++|||++|+++|
T Consensus       256 --~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         256 --MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence              11223457789999999999999999999999986

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.4e-51  Score=383.09  Aligned_cols=264  Identities=23%  Similarity=0.285  Sum_probs=206.2

Q ss_pred             cCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEE
Q 013678           90 LTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (438)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~  169 (438)
                      +.++|++.++||+|+||.||+|++..+|+.||||++.... ....+.+|+++++.+.|+++    ++.+.+++.+++..+
T Consensus         5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l~~~~~----i~~~~~~~~~~~~~~   79 (299)
T d1ckia_           5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVG----IPTIRWCGAEGDYNV   79 (299)
T ss_dssp             ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHSTTSTT----CCCEEEEEEETTEEE
T ss_pred             ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHccCCCc----ccEEEEEEecCCEEE
Confidence            4578999999999999999999999999999999987533 33457889999999988754    356667778888999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCCC
Q 013678          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS  249 (438)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~~  249 (438)
                      +||||++++|.+.+.... ..+++..+..++.|++.||+|||++||+||||||+|||++..+                  
T Consensus        80 ivme~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~------------------  140 (299)
T d1ckia_          80 MVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK------------------  140 (299)
T ss_dssp             EEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGG------------------
T ss_pred             EEEEEcCCchhhhhhhcc-CCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccC------------------
Confidence            999999889888876544 5799999999999999999999999999999999999986533                  


Q ss_pred             cccCCCCCCCeEEecCCCCcccCCC----------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 013678          250 YFKNLPKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ  319 (438)
Q Consensus       250 ~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~  319 (438)
                            .+..++|+|||+|+.....          .....||+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus       141 ------~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~  214 (299)
T d1ckia_         141 ------KGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ  214 (299)
T ss_dssp             ------GTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             ------CCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCccc
Confidence                  2346888888888764322          223579999999999999999999999999999999999999998


Q ss_pred             CCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      ..........+.....                                          .............+++++.+||
T Consensus       215 ~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~~~~p~~~~~li  252 (299)
T d1ckia_         215 GLKAATKRQKYERISE------------------------------------------KKMSTPIEVLCKGYPSEFATYL  252 (299)
T ss_dssp             CCC-------HHHHHH------------------------------------------HHHHSCHHHHTTTSCHHHHHHH
T ss_pred             ccchHHHHHHHHHhhc------------------------------------------ccCCCChhHhccCCCHHHHHHH
Confidence            7665444333322100                                          0000001122345678999999


Q ss_pred             HHccccCCCCCCCHH---HHhcCCCCCCC
Q 013678          400 QGLLRYDPAERLKAR---EALRHPFFTRD  425 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~---ell~hp~f~~~  425 (438)
                      .+||+.||++||++.   ++|+|+|.+..
T Consensus       253 ~~cl~~~p~~RP~~~~i~~~l~~~~~~~~  281 (299)
T d1ckia_         253 NFCRSLRFDDKPDYSYLRQLFRNLFHRQG  281 (299)
T ss_dssp             HHHHHSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             HHHccCChhHCcCHHHHHHHHHHHHHHcC
Confidence            999999999999986   55778776543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-51  Score=379.19  Aligned_cols=245  Identities=20%  Similarity=0.294  Sum_probs=192.2

Q ss_pred             CceEEEeeeeeecceEEEEEEECC-CC--cEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNE-KK--ELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~-~~--~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~  164 (438)
                      ++|++++.||+|+||.||+|+... ++  ..||||++++.    ....+.+.+|+.++++++|+||     +++++++.+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nI-----v~~~g~~~~   82 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL-----IRLYGVVLT   82 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTB-----CCEEEEECS
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCE-----EEEEEEEee
Confidence            579999999999999999998643 33  46899998642    3345678999999999998887     999999976


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 013678          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR  243 (438)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~  243 (438)
                       +.+++||||| +++|.+++..+. ..+++..+..++.||+.||+|||++||+||||||+|||++.++.           
T Consensus        83 -~~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~-----------  149 (273)
T d1u46a_          83 -PPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-----------  149 (273)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTE-----------
T ss_pred             -cchheeeeeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccc-----------
Confidence             4678999999 999999887654 36999999999999999999999999999999999999987664           


Q ss_pred             CCCCCCcccCCCCCCCeEEecCCCCcccCCCC------cccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHh-CCC
Q 013678          244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEA  316 (438)
Q Consensus       244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~  316 (438)
                                      +||+|||+++......      ....||..|+|||++.+..++.++|||||||++|||+| |..
T Consensus       150 ----------------vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~  213 (273)
T d1u46a_         150 ----------------VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE  213 (273)
T ss_dssp             ----------------EEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ----------------eeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCC
Confidence                            5666666665433221      22467889999999999999999999999999999998 899


Q ss_pred             CCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHH
Q 013678          317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLI  396 (438)
Q Consensus       317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  396 (438)
                      ||.+.+..+....+.+....                                                .+.+..+++++.
T Consensus       214 Pf~~~~~~~~~~~i~~~~~~------------------------------------------------~~~~~~~~~~l~  245 (273)
T d1u46a_         214 PWIGLNGSQILHKIDKEGER------------------------------------------------LPRPEDCPQDIY  245 (273)
T ss_dssp             TTTTCCHHHHHHHHHTSCCC------------------------------------------------CCCCTTCCHHHH
T ss_pred             CCCCcCHHHHHHHHHhCCCC------------------------------------------------CCCcccccHHHH
Confidence            99988887776655432100                                                012235577899


Q ss_pred             HHHHHccccCCCCCCCHHHHhc
Q 013678          397 DLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       397 ~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      +||.+||+.||++|||+.||++
T Consensus       246 ~li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         246 NVMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHH
Confidence            9999999999999999999874

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.4e-51  Score=381.90  Aligned_cols=247  Identities=20%  Similarity=0.297  Sum_probs=202.1

Q ss_pred             CCceEEEeeeeeecceEEEEEEEC-----CCCcEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      .++|+++++||+|+||+||+|+.+     .+++.||||+++..  ....+.+.+|+.+++.++|+|+     +++++++.
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~ni-----v~~~~~~~   86 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI-----VKLLGVCA   86 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEEC
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCc-----ccceeeec
Confidence            367999999999999999999875     35688999998743  2345678999999999998887     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNS----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDL  220 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  220 (438)
                      ..+..++||||+ +|+|.+++....                      ...+++..+..|+.||+.||+|||++|||||||
T Consensus        87 ~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDl  166 (301)
T d1lufa_          87 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL  166 (301)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEE
Confidence            999999999999 999999997532                      124889999999999999999999999999999


Q ss_pred             CCCcEEEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCC-----CCcccccCCCcchhHHHhCCCC
Q 013678          221 KPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGLGW  295 (438)
Q Consensus       221 kp~NIli~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~  295 (438)
                      ||+|||++.++                           .+||+|||+|+....     ......||+.|+|||++.+..+
T Consensus       167 Kp~NILld~~~---------------------------~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  219 (301)
T d1lufa_         167 ATRNCLVGENM---------------------------VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRY  219 (301)
T ss_dssp             SGGGEEECGGG---------------------------CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCC
T ss_pred             cccceEECCCC---------------------------cEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCC
Confidence            99999997766                           466666666653321     1223578899999999999999


Q ss_pred             CcchhHHHHHHHHHHHHhCC-CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHH
Q 013678          296 NYPCDLWSVGCILVELCSGE-ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV  374 (438)
Q Consensus       296 ~~~~DiwSlG~il~elltg~-~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (438)
                      +.++|||||||++|||++|. +||.+.+..+....+.+.  ..|                                    
T Consensus       220 t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~--~~~------------------------------------  261 (301)
T d1lufa_         220 TTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDG--NIL------------------------------------  261 (301)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT--CCC------------------------------------
T ss_pred             ChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcC--CCC------------------------------------
Confidence            99999999999999999985 678887777666554321  110                                    


Q ss_pred             HHhccchhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          375 WKLLRLPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       375 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                                 ..+..+++++.+||.+||+.||++|||+.||++
T Consensus       262 -----------~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         262 -----------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                       112355778999999999999999999999975

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-50  Score=378.89  Aligned_cols=247  Identities=19%  Similarity=0.309  Sum_probs=197.1

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCC-------cEEEEEEeecch--hhHHHHHHHHHHHHHH-HhcCCCCcceEEecc
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKK-------ELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRN  160 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-------~~vaiK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~  160 (438)
                      .++|++.+.||+|+||.||+|++..++       ..||||+++...  .....+.+|...+.++ +|+||     +++++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnI-----v~~~~   86 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNI-----INLLG   86 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCEEE
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeE-----Eeccc
Confidence            368999999999999999999876554       479999996533  3457788899999888 57766     99999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 013678          161 WFDYRNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  225 (438)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  225 (438)
                      ++.+++.+++||||| +|+|.+++....              ...+++..++.++.||+.||+|||++|||||||||+||
T Consensus        87 ~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~Ni  166 (299)
T d1fgka_          87 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV  166 (299)
T ss_dssp             EECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             ccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccce
Confidence            999999999999999 999999997543              23589999999999999999999999999999999999


Q ss_pred             EEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-----CcccccCCCcchhHHHhCCCCCcchh
Q 013678          226 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCD  300 (438)
Q Consensus       226 li~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~D  300 (438)
                      |++.++                           .+||+|||++......     .....||+.|+|||.+.+..|+.++|
T Consensus       167 Ll~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~D  219 (299)
T d1fgka_         167 LVTEDN---------------------------VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD  219 (299)
T ss_dssp             EECTTC---------------------------CEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHH
T ss_pred             eecCCC---------------------------CeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhh
Confidence            997766                           4566666666543322     12357899999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhcc
Q 013678          301 LWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR  379 (438)
Q Consensus       301 iwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (438)
                      ||||||++|||++ |..||.+.+..+....+...  .                     +.                    
T Consensus       220 iwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~--~---------------------~~--------------------  256 (299)
T d1fgka_         220 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG--H---------------------RM--------------------  256 (299)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT--C---------------------CC--------------------
T ss_pred             hHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcC--C---------------------CC--------------------
Confidence            9999999999998 78999887766554443321  0                     11                    


Q ss_pred             chhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       380 ~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                            ..+..+++++.+||.+||+.||++|||+.||++
T Consensus       257 ------~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         257 ------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             ------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------CCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence                  112345778999999999999999999999986

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=4.6e-50  Score=374.39  Aligned_cols=257  Identities=20%  Similarity=0.229  Sum_probs=205.0

Q ss_pred             ccCCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           89 NLTPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .+.++|++.++||+|+||+||+|++..+|+.||||++.... ....+.+|+++++.|.|+    +|++.+++++..+...
T Consensus         2 vig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~e~~~~~~l~~~----~~i~~~~~~~~~~~~~   76 (293)
T d1csna_           2 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGC----TGIPNVYYFGQEGLHN   76 (293)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTC----TTCCCEEEEEEETTEE
T ss_pred             CCCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-CcHHHHHHHHHHHHhcCC----CCCCEEEEEeecCCcc
Confidence            46789999999999999999999999999999999986532 334577899999999874    3448888999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCCC
Q 013678          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG  248 (438)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~~  248 (438)
                      ++||||++++|.+++.... ..++...+..++.|++.||+|||++||+||||||+|||++....                
T Consensus        77 ~~vme~~~~~l~~~~~~~~-~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~----------------  139 (293)
T d1csna_          77 VLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNS----------------  139 (293)
T ss_dssp             EEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSS----------------
T ss_pred             EEEEEecCCCHHHHHHhhc-cchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCccc----------------
Confidence            9999999999999987654 57999999999999999999999999999999999999965321                


Q ss_pred             CcccCCCCCCCeEEecCCCCcccCCC----------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 013678          249 SYFKNLPKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF  318 (438)
Q Consensus       249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf  318 (438)
                            .....+||+|||+|+.....          ....+||+.|||||++.+..++.++|||||||++|||++|..||
T Consensus       140 ------~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf  213 (293)
T d1csna_         140 ------KNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW  213 (293)
T ss_dssp             ------TTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ------ccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcC
Confidence                  12446888888888754321          22357999999999999999999999999999999999999999


Q ss_pred             CCCChHH---HHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHH
Q 013678          319 QTHENLE---HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDL  395 (438)
Q Consensus       319 ~~~~~~~---~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  395 (438)
                      .+.....   ....+.......                                             ...+....+++++
T Consensus       214 ~~~~~~~~~~~~~~i~~~~~~~---------------------------------------------~~~~l~~~~p~~l  248 (293)
T d1csna_         214 QGLKAATNKQKYERIGEKKQST---------------------------------------------PLRELCAGFPEEF  248 (293)
T ss_dssp             SSCCSCCHHHHHHHHHHHHHHS---------------------------------------------CHHHHTTTSCHHH
T ss_pred             CCccchhHHHHHHHHHhccCCC---------------------------------------------ChHHhcCCCCHHH
Confidence            7654322   222221110000                                             0111224567789


Q ss_pred             HHHHHHccccCCCCCCCHHHHhc
Q 013678          396 IDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       396 ~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                      .+++..|+..+|++||+.+.+.+
T Consensus       249 ~~ii~~~~~~~~~~rP~y~~l~~  271 (293)
T d1csna_         249 YKYMHYARNLAFDATPDYDYLQG  271 (293)
T ss_dssp             HHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHhcCCcccCcCHHHHHH
Confidence            99999999999999998766543

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-51  Score=383.76  Aligned_cols=247  Identities=21%  Similarity=0.277  Sum_probs=199.1

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcE--EEEEEeecc--hhhHHHHHHHHHHHHHH-HhcCCCCcceEEecceeccCC
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKEL--VAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRN  166 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~--vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~  166 (438)
                      ++|++.++||+|+||.||+|+++.++..  ||||.++..  ....+.+.+|+.+|.++ +|+||     +++++++.+++
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnI-----v~~~~~~~~~~   84 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI-----INLLGACEHRG   84 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTB-----CCEEEEEEETT
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCE-----eeEEEEEecCC
Confidence            6789999999999999999999888864  677777532  23456789999999998 57776     99999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhc--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 013678          167 HICIVFEKL-GPSLYDFLRKN--------------SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~--------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~  231 (438)
                      .++|||||| +|+|.+++...              ....+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus        85 ~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~  164 (309)
T d1fvra_          85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  164 (309)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred             eeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCC
Confidence            999999999 99999999754              235799999999999999999999999999999999999997665


Q ss_pred             ccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC--cccccCCCcchhHHHhCCCCCcchhHHHHHHHHH
Q 013678          232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  309 (438)
Q Consensus       232 ~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  309 (438)
                                                 .+||+|||+|+......  ....||..|+|||.+.+..++.++|||||||++|
T Consensus       165 ---------------------------~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~  217 (309)
T d1fvra_         165 ---------------------------VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW  217 (309)
T ss_dssp             ---------------------------CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred             ---------------------------ceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHH
Confidence                                       56777777765433222  2346899999999999999999999999999999


Q ss_pred             HHHhCC-CCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhcc
Q 013678          310 ELCSGE-ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  388 (438)
Q Consensus       310 elltg~-~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (438)
                      ||++|. +||.+.+..+....+.+.  .                     +                          ...+
T Consensus       218 ell~~~~~p~~~~~~~~~~~~i~~~--~---------------------~--------------------------~~~~  248 (309)
T d1fvra_         218 EIVSLGGTPYCGMTCAELYEKLPQG--Y---------------------R--------------------------LEKP  248 (309)
T ss_dssp             HHHTTSCCTTTTCCHHHHHHHGGGT--C---------------------C--------------------------CCCC
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHhc--C---------------------C--------------------------CCCC
Confidence            999965 578777666554433221  0                     0                          1122


Q ss_pred             CCchhHHHHHHHHccccCCCCCCCHHHHhcC
Q 013678          389 DHSAGDLIDLLQGLLRYDPAERLKAREALRH  419 (438)
Q Consensus       389 ~~~~~~l~~ll~~~L~~dP~~Rpta~ell~h  419 (438)
                      ..+++++.+||.+||+.||++|||+.||++|
T Consensus       249 ~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         249 LNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            3467799999999999999999999999986

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-49  Score=374.21  Aligned_cols=248  Identities=24%  Similarity=0.342  Sum_probs=199.2

Q ss_pred             CCceEEEeeeeeecceEEEEEEE-----CCCCcEEEEEEeecc--hhhHHHHHHHHHHHHHH-HhcCCCCcceEEeccee
Q 013678           91 TPRCKILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWF  162 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~  162 (438)
                      .++|++.++||+|+||.||+|+.     ..+++.||||+++..  ......+.+|+.++..+ +|+||     |++++++
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnI-----v~~~g~~   96 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI-----VNLLGAC   96 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEE
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCE-----EEEEEEE
Confidence            36899999999999999999985     346788999999753  33456788999999999 47666     9999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 013678          163 DYRNHICIVFEKL-GPSLYDFLRKNS----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  225 (438)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~----------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  225 (438)
                      .+.+.++|||||| +|+|.+++....                ...+++..+..++.||+.||+|||++|||||||||+||
T Consensus        97 ~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NI  176 (311)
T d1t46a_          97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI  176 (311)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             eeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccc
Confidence            9999999999999 999999997643                13589999999999999999999999999999999999


Q ss_pred             EEecCcccccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchh
Q 013678          226 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCD  300 (438)
Q Consensus       226 li~~~~~~kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D  300 (438)
                      |++.++.++++|||                           .++......     ....||+.|+|||++.+..++.++|
T Consensus       177 l~~~~~~~ki~DfG---------------------------~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  229 (311)
T d1t46a_         177 LLTHGRITKICDFG---------------------------LARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD  229 (311)
T ss_dssp             EEETTTEEEECCCG---------------------------GGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHH
T ss_pred             cccccCcccccccc---------------------------hheeccCCCcceEeeecccChHHcCHHHhcCCCCCCccc
Confidence            99877755555555                           444332211     2247899999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhcc
Q 013678          301 LWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR  379 (438)
Q Consensus       301 iwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (438)
                      ||||||++|||+| |.+||.+.+..+.+..+...-.                                            
T Consensus       230 IwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~--------------------------------------------  265 (311)
T d1t46a_         230 VWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF--------------------------------------------  265 (311)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTC--------------------------------------------
T ss_pred             ccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC--------------------------------------------
Confidence            9999999999998 6666766655554444332110                                            


Q ss_pred             chhhhhhccCCchhHHHHHHHHccccCCCCCCCHHHHhc
Q 013678          380 LPNLIMQHVDHSAGDLIDLLQGLLRYDPAERLKAREALR  418 (438)
Q Consensus       380 ~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~Rpta~ell~  418 (438)
                          ....+...++++.+||.+||+.||++|||+.||++
T Consensus       266 ----~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         266 ----RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             ----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----CCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                00112345678999999999999999999999985

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-50  Score=376.70  Aligned_cols=253  Identities=21%  Similarity=0.325  Sum_probs=207.5

Q ss_pred             CCceEEEeeeeeecceEEEEEEECC-----CCcEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCcceEEecceec
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~  163 (438)
                      .++|++.++||+|+||+||+|.+..     ++..||||+++...  .....+.+|+.++++++|+||     +++++++.
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nI-----v~~~~~~~   93 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV-----VRLLGVVS   93 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTB-----CCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCE-----eeeeeEEe
Confidence            4789999999999999999998753     35789999997532  334567899999999988877     99999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 013678          164 YRNHICIVFEKL-GPSLYDFLRKNS--------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  234 (438)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~k  234 (438)
                      .++..++||||| +|+|.+++....        ...+++..+..++.|++.||.|||+++|+||||||+|||++.++   
T Consensus        94 ~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~---  170 (308)
T d1p4oa_          94 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF---  170 (308)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTC---
T ss_pred             cCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCc---
Confidence            999999999999 999999986421        13478999999999999999999999999999999999996654   


Q ss_pred             cCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCC-----cccccCCCcchhHHHhCCCCCcchhHHHHHHHHH
Q 013678          235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV  309 (438)
Q Consensus       235 l~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  309 (438)
                                              .+||+|||+|+......     ....||+.|+|||.+.+..++.++|||||||++|
T Consensus       171 ------------------------~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~  226 (308)
T d1p4oa_         171 ------------------------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW  226 (308)
T ss_dssp             ------------------------CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             ------------------------eEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHH
Confidence                                    57777777776543322     2246899999999999999999999999999999


Q ss_pred             HHHhC-CCCCCCCChHHHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhcc
Q 013678          310 ELCSG-EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHV  388 (438)
Q Consensus       310 elltg-~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (438)
                      ||+|| ..||.+.+..+.+..+.+..  .                                               ...+
T Consensus       227 El~t~~~~p~~~~~~~~~~~~i~~~~--~-----------------------------------------------~~~p  257 (308)
T d1p4oa_         227 EIATLAEQPYQGLSNEQVLRFVMEGG--L-----------------------------------------------LDKP  257 (308)
T ss_dssp             HHHHTSCCTTTTSCHHHHHHHHHTTC--C-----------------------------------------------CCCC
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHhCC--C-----------------------------------------------CCCc
Confidence            99998 57888877776665543211  0                                               1112


Q ss_pred             CCchhHHHHHHHHccccCCCCCCCHHHHhc------CCCCCC
Q 013678          389 DHSAGDLIDLLQGLLRYDPAERLKAREALR------HPFFTR  424 (438)
Q Consensus       389 ~~~~~~l~~ll~~~L~~dP~~Rpta~ell~------hp~f~~  424 (438)
                      ..+++.+.+||.+||+.||++|||+.||++      +|+|++
T Consensus       258 ~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~  299 (308)
T d1p4oa_         258 DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE  299 (308)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred             ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcC
Confidence            345678999999999999999999999998      777653

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-48  Score=367.09  Aligned_cols=249  Identities=17%  Similarity=0.213  Sum_probs=192.7

Q ss_pred             EEEeeeeeecceEEEEEEECCCC---cEEEEEEeec--chhhHHHHHHHHHHHHHHHhcCCCCcceEEecceecc-CCeE
Q 013678           95 KILSKMGEGTFGQVVECFDNEKK---ELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-RNHI  168 (438)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-~~~~  168 (438)
                      .+.++||+|+||+||+|++..++   ..||||+++.  .....+.+.+|++++.+++|+||     +++++++.. ++..
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnI-----v~~~g~~~~~~~~~  104 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV-----LSLLGICLRSEGSP  104 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTB-----CCCCEEEEETTTEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCE-----eEEeEEEEecCCce
Confidence            34678999999999999986643   3689999864  33455778999999999988887     999998754 5689


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccCCCC
Q 013678          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD  247 (438)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~kl~df~l~~~~~~~  247 (438)
                      ++||||| +++|.+++.... ..+++..+..++.|++.||.|||+.+|+||||||+|||++.++.+              
T Consensus       105 ~lv~E~~~~g~l~~~~~~~~-~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~--------------  169 (311)
T d1r0pa_         105 LVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTV--------------  169 (311)
T ss_dssp             EEEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCE--------------
T ss_pred             EEEEEEeecCchhhhhcccc-ccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCE--------------
Confidence            9999999 999999987654 468889999999999999999999999999999999999776655              


Q ss_pred             CCcccCCCCCCCeEEecCCCCcccCCC-------CcccccCCCcchhHHHhCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Q 013678          248 GSYFKNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT  320 (438)
Q Consensus       248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  320 (438)
                                   ||+|||+++.....       .....||..|+|||.+.+..++.++|||||||++|||++|..||..
T Consensus       170 -------------kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~  236 (311)
T d1r0pa_         170 -------------KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP  236 (311)
T ss_dssp             -------------EECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC
T ss_pred             -------------EEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCC
Confidence                         55555544432211       1224689999999999999999999999999999999998887765


Q ss_pred             CChH-HHHHHHHHHhCCCChHHHHHHhhhhhhhhcCCCcccCCCCCCChhhHHHHHHhccchhhhhhccCCchhHHHHHH
Q 013678          321 HENL-EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPNLIMQHVDHSAGDLIDLL  399 (438)
Q Consensus       321 ~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll  399 (438)
                      .... +....+..  |.                     +.                          ..+..+++++.+||
T Consensus       237 ~~~~~~~~~~i~~--g~---------------------~~--------------------------~~p~~~~~~l~~li  267 (311)
T d1r0pa_         237 DVNTFDITVYLLQ--GR---------------------RL--------------------------LQPEYCPDPLYEVM  267 (311)
T ss_dssp             ------CHHHHHT--TC---------------------CC--------------------------CCCTTCCHHHHHHH
T ss_pred             CCCHHHHHHHHHc--CC---------------------CC--------------------------CCcccCcHHHHHHH
Confidence            3322 21211111  00                     00                          11234567899999


Q ss_pred             HHccccCCCCCCCHHHHhcC------CCCCCC
Q 013678          400 QGLLRYDPAERLKAREALRH------PFFTRD  425 (438)
Q Consensus       400 ~~~L~~dP~~Rpta~ell~h------p~f~~~  425 (438)
                      .+||+.||++|||+.||++|      .|..++
T Consensus       268 ~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~~~  299 (311)
T d1r0pa_         268 LKCWHPKAEMRPSFSELVSRISAIFSTFIGEH  299 (311)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred             HHHcCCCHhHCcCHHHHHHHHHHHHHhhhhhh
Confidence            99999999999999999998      666654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-49  Score=367.47  Aligned_cols=193  Identities=22%  Similarity=0.257  Sum_probs=153.8

Q ss_pred             CCceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCC----
Q 013678           91 TPRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN----  166 (438)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~----  166 (438)
                      +.+|.+.++||+|+||.||+|+.  +|+.||||+++...........|+..+..++|+||     +++++++.+.+    
T Consensus         2 ~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnI-----v~~~~~~~~~~~~~~   74 (303)
T d1vjya_           2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI-----LGFIAADNKDNGTWT   74 (303)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTB-----CCEEEEEEEECSSSE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcC-----cceEEEEEeCCCcce
Confidence            46789999999999999999985  68899999997544333323344444455666665     99999987543    


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh--------CCceecCCCCCcEEEecCcccccCC
Q 013678          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE--------LRLIHTDLKPENILLVSAEYVKVPD  237 (438)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~--------~~ivHrDlkp~NIli~~~~~~kl~d  237 (438)
                      .+||||||| +|+|.+++++.   .+++..+..++.|++.||.|||+        +||+||||||+||||+.++      
T Consensus        75 ~~~lv~Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~------  145 (303)
T d1vjya_          75 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG------  145 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTS------
T ss_pred             EEEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCC------
Confidence            789999999 99999999875   49999999999999999999996        5999999999999997666      


Q ss_pred             ccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCC-------CcccccCCCcchhHHHhCCC------CCcchhHHHH
Q 013678          238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILGLG------WNYPCDLWSV  304 (438)
Q Consensus       238 f~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~------~~~~~DiwSl  304 (438)
                                           .+||+|||++......       ....+||+.|+|||++.+..      ++.++|||||
T Consensus       146 ---------------------~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~  204 (303)
T d1vjya_         146 ---------------------TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM  204 (303)
T ss_dssp             ---------------------CEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHH
T ss_pred             ---------------------CeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhh
Confidence                                 4566666665543221       22357999999999988653      5678999999


Q ss_pred             HHHHHHHHhCCCCCCC
Q 013678          305 GCILVELCSGEALFQT  320 (438)
Q Consensus       305 G~il~elltg~~pf~~  320 (438)
                      ||+||||+||..||..
T Consensus       205 Gvvl~el~tg~~~~~~  220 (303)
T d1vjya_         205 GLVFWEIARRCSIGGI  220 (303)
T ss_dssp             HHHHHHHHHTBCBTTB
T ss_pred             HHHHHHHhhCCCCCCc
Confidence            9999999999988754

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.93  E-value=3.8e-26  Score=198.15  Aligned_cols=162  Identities=21%  Similarity=0.230  Sum_probs=114.8

Q ss_pred             eEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-------------------hhHHHHHHHHHHHHHHHhcCCCCcc
Q 013678           94 CKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------------------KYREAAMIEIDVLQRLARHDIGGTR  154 (438)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------------------~~~~~~~~E~~~l~~l~~~~i~~~~  154 (438)
                      |.+.++||+|+||+||+|++. +|+.||||+++...                   .......+|...+.++.|.++    
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v----   76 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAV----   76 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSS----
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCc----
Confidence            457899999999999999984 68899999875211                   112334568888888877765    


Q ss_pred             eEEecceeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccc
Q 013678          155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  233 (438)
Q Consensus       155 iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIli~~~~~~  233 (438)
                       +..+++..    .++||||+ +..+.         .++...+..++.||+.||+|||++||+||||||+|||++.++  
T Consensus        77 -~~~~~~~~----~~lvme~~~~~~~~---------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~--  140 (191)
T d1zara2          77 -PKVYAWEG----NAVLMELIDAKELY---------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG--  140 (191)
T ss_dssp             -CCEEEEET----TEEEEECCCCEEGG---------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTE--
T ss_pred             -ceEEEecC----CEEEEEeecccccc---------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCCC--
Confidence             55554332    27999999 44332         255566788999999999999999999999999999997543  


Q ss_pred             ccCCccccccCCCCCCcccCCCCCCCeEEecCCCCcccCCCCcccccCCCcchh--HH---HhCCCCCcchhHHHHHHH
Q 013678          234 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAP--EV---ILGLGWNYPCDLWSVGCI  307 (438)
Q Consensus       234 kl~df~l~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aP--E~---~~~~~~~~~~DiwSlG~i  307 (438)
                                                ++|+|||.|.....+...     .|...  +.   +....|+.++|+||+.--
T Consensus       141 --------------------------~~liDFG~a~~~~~~~~~-----~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~  188 (191)
T d1zara2         141 --------------------------IWIIDFPQSVEVGEEGWR-----EILERDVRNIITYFSRTYRTEKDINSAIDR  188 (191)
T ss_dssp             --------------------------EEECCCTTCEETTSTTHH-----HHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred             --------------------------EEEEECCCcccCCCCCcH-----HHHHHHHHHHHHHHcCCCCCcccHHHHHHH
Confidence                                      788999988665433211     11111  10   113457889999997543

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.43  E-value=4.5e-07  Score=80.26  Aligned_cols=85  Identities=9%  Similarity=0.044  Sum_probs=58.8

Q ss_pred             CceEEEeeeeeecceEEEEEEECCCCcEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEE
Q 013678           92 PRCKILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (438)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l  170 (438)
                      +.|++++..+-++.+.||+..  .++..+++|+..... .....+.+|...+..+.. .+.   +.+++.+..+++..++
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~-~vp---vP~vl~~~~~~~~~~l   87 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKGTTYDVEREKDMMLWLEG-KLP---VPKVLHFERHDGWSNL   87 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT-TSC---CCCEEEEEEETTEEEE
T ss_pred             hceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhc-cCC---CCcEEEEEecCCceEE
Confidence            567777766555667899885  455567889875432 233456789999888853 232   3556666777889999


Q ss_pred             EEccC-CCCHHHH
Q 013678          171 VFEKL-GPSLYDF  182 (438)
Q Consensus       171 v~e~~-~~~L~~~  182 (438)
                      ||+++ |.++.+.
T Consensus        88 v~~~l~G~~~~~~  100 (263)
T d1j7la_          88 LMSEADGVLCSEE  100 (263)
T ss_dssp             EEECCSSEEHHHH
T ss_pred             EEEeccccccccc
Confidence            99999 7777554

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.07  E-value=7.8e-06  Score=76.64  Aligned_cols=75  Identities=21%  Similarity=0.221  Sum_probs=47.4

Q ss_pred             EeeeeeecceEEEEEEECCCCcEEEEEEeecc--------hhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      .+.||.|....||++.+..+++.|+||.-...        .........|...|..+....  ...+.+++.+.  ....
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~--p~~vP~v~~~d--~~~~  106 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHV--PHLVPRVFYSD--TEMA  106 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTC--GGGSCCEEEEE--TTTT
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhC--CCCcceEEEEc--CCCC
Confidence            56789999999999998888888999974321        112234567999988776431  12335555433  3445


Q ss_pred             EEEEccC
Q 013678          169 CIVFEKL  175 (438)
Q Consensus       169 ~lv~e~~  175 (438)
                      ++|||++
T Consensus       107 ~lvmE~L  113 (392)
T d2pula1         107 VTVMEDL  113 (392)
T ss_dssp             EEEECCC
T ss_pred             EEEEecc
Confidence            7899999

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.88  E-value=1.2e-05  Score=70.30  Aligned_cols=75  Identities=15%  Similarity=0.126  Sum_probs=52.8

Q ss_pred             eeeeec-ceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeEEEEEccC-C
Q 013678           99 KMGEGT-FGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-G  176 (438)
Q Consensus        99 ~lg~G~-~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~  176 (438)
                      .+..|. .+.||+... .++..+++|......  ...+..|...++.+....+.   +.+++.+..+++..++||+++ |
T Consensus        17 ~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~gvp---vP~v~~~~~~~~~~~~v~~~i~G   90 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA--LNELQDEAARLSWLATTGVP---CAAVLDVVTEAGRDWLLLGEVPG   90 (255)
T ss_dssp             ECSCTTSSCEEEEEEC-TTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTTTCC---BCCEEEEEECSSCEEEEEECCSS
T ss_pred             EcCCcccCCeEEEEEe-CCCCEEEEEeCCccC--HhHHHHHHHHHHHHHhcCCC---CCceeeecccccceEEEEEeeec
Confidence            344454 367898875 456668899865432  34577899999999887663   455566667778899999999 6


Q ss_pred             CCH
Q 013678          177 PSL  179 (438)
Q Consensus       177 ~~L  179 (438)
                      .++
T Consensus        91 ~~~   93 (255)
T d1nd4a_          91 QDL   93 (255)
T ss_dssp             EET
T ss_pred             ccc
Confidence            554

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=5e-05  Score=69.08  Aligned_cols=70  Identities=16%  Similarity=0.216  Sum_probs=50.7

Q ss_pred             eEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecc--eeccCCeEEEEEccCC
Q 013678          106 GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN--WFDYRNHICIVFEKLG  176 (438)
Q Consensus       106 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~--~~~~~~~~~lv~e~~~  176 (438)
                      -.||++.. .+|+.|++|+.+......+++..|+..+..|...++..+..+..-+  .+...+..+.++++++
T Consensus        36 N~vy~v~~-~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~  107 (325)
T d1zyla1          36 NRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG  107 (325)
T ss_dssp             SEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred             ceeEEEEc-CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecC
Confidence            57999975 5678899999876655667788999999999988764333332221  2344667889999983

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.44  E-value=0.00022  Score=66.49  Aligned_cols=73  Identities=14%  Similarity=0.179  Sum_probs=52.0

Q ss_pred             EEeeeeeecceEEEEEEECC-------CCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecceeccCCeE
Q 013678           96 ILSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (438)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~  168 (438)
                      -++.|+.|-.-.+|++....       ..+.|++++... ........+|..+++.+...+++    .++++++.+    
T Consensus        46 ~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-~~~~idr~~E~~i~~~ls~~gl~----Pkll~~~~~----  116 (395)
T d1nw1a_          46 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-PETESHLVAESVIFTLLSERHLG----PKLYGIFSG----  116 (395)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-CCCHHHHHHHHHHHHHHHHTTSS----SCEEEEETT----
T ss_pred             EEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-cchhhHHHHHHHHHHHHHhCCCC----CeEEEEcCC----
Confidence            45789899999999998643       345688888753 23334566899999999887762    456666654    


Q ss_pred             EEEEccC-CC
Q 013678          169 CIVFEKL-GP  177 (438)
Q Consensus       169 ~lv~e~~-~~  177 (438)
                      .+||||+ |.
T Consensus       117 g~I~efi~g~  126 (395)
T d1nw1a_         117 GRLEEYIPSR  126 (395)
T ss_dssp             EEEECCCCEE
T ss_pred             ceEEEEeccc
Confidence            5789998 53

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.95  E-value=0.0021  Score=57.52  Aligned_cols=78  Identities=9%  Similarity=0.072  Sum_probs=45.6

Q ss_pred             EEEeeeeeecceEEEEEEECCCCcEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCcceEEecc---eeccCCeEEEE
Q 013678           95 KILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN---WFDYRNHICIV  171 (438)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~---~~~~~~~~~lv  171 (438)
                      .-.+.|..|---+.|+.... +|+ +++|++... ...+.+..|+.++..|...++..|..+...+   +.........+
T Consensus        21 ~~~~~i~~G~~N~ny~v~t~-~g~-yVLri~~~~-~~~~~l~~~~~~l~~L~~~g~pvp~pi~~~~g~~~~~~~~~~~~~   97 (316)
T d2ppqa1          21 TSYKGIAEGVENSNFLLHTT-KDP-LILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAAL   97 (316)
T ss_dssp             EEEEEECC---EEEEEEEES-SCC-EEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEE
T ss_pred             eEeecCCCCcccCeEEEEEC-CCc-EEEEEcCCC-CCHHHHHHHHHHHHhhhhccccccccceecCCCcceeeeccccee
Confidence            34456777777889998754 344 899998643 2345566789999999998875544433222   11123455666


Q ss_pred             EccC
Q 013678          172 FEKL  175 (438)
Q Consensus       172 ~e~~  175 (438)
                      +.++
T Consensus        98 ~~~~  101 (316)
T d2ppqa1          98 ISFL  101 (316)
T ss_dssp             EECC
T ss_pred             eeec
Confidence            6665