Query 013679
Match_columns 438
No_of_seqs 179 out of 1058
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 15:05:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013679.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013679hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kae_A HDH, histidinol dehydro 100.0 2E-167 6E-172 1279.4 41.5 420 2-429 5-430 (434)
2 4gic_A HDH, histidinol dehydro 100.0 1E-162 5E-167 1240.9 35.6 410 1-415 7-423 (423)
3 3k9d_A LMO1179 protein, aldehy 97.5 0.031 1E-06 57.7 24.4 331 23-395 31-449 (464)
4 3my7_A Alcohol dehydrogenase/a 97.4 0.044 1.5E-06 56.3 23.8 327 24-392 27-446 (452)
5 4ghk_A Gamma-glutamyl phosphat 97.2 0.06 2E-06 55.3 22.6 330 26-392 48-436 (444)
6 3etf_A Putative succinate-semi 97.1 0.17 5.7E-06 52.1 24.9 318 24-392 49-458 (462)
7 2w8n_A Succinate-semialdehyde 97.0 0.42 1.4E-05 49.7 27.8 324 23-392 67-483 (487)
8 4e4g_A Methylmalonate-semialde 97.0 0.3 1E-05 51.4 25.9 322 25-393 85-503 (521)
9 1o04_A Aldehyde dehydrogenase, 96.9 0.3 1E-05 51.0 25.3 320 26-393 82-493 (500)
10 4dng_A Uncharacterized aldehyd 96.8 0.31 1E-05 50.5 24.2 324 24-392 64-475 (485)
11 1bxs_A Aldehyde dehydrogenase; 96.8 0.24 8.1E-06 51.8 23.2 321 27-393 84-494 (501)
12 3jz4_A Succinate-semialdehyde 96.7 0.7 2.4E-05 47.8 28.5 320 27-392 70-478 (481)
13 3r31_A BADH, betaine aldehyde 96.7 0.53 1.8E-05 49.4 24.8 318 26-393 74-486 (517)
14 3ros_A NAD-dependent aldehyde 96.7 0.23 7.7E-06 51.7 21.9 322 23-393 45-456 (484)
15 4h7n_A Aldehyde dehydrogenase; 96.6 0.61 2.1E-05 48.2 24.7 287 82-392 88-460 (474)
16 3k2w_A Betaine-aldehyde dehydr 96.6 0.63 2.2E-05 48.4 24.9 280 81-393 110-486 (497)
17 3v4c_A Aldehyde dehydrogenase 96.4 0.78 2.7E-05 48.1 24.4 334 24-397 83-520 (528)
18 1t90_A MMSDH, probable methylm 96.4 1.1 3.6E-05 46.6 26.5 323 24-393 63-478 (486)
19 2ve5_A BADH, betaine aldehyde 96.4 0.28 9.7E-06 50.8 20.6 281 82-392 106-480 (490)
20 3u4j_A NAD-dependent aldehyde 96.4 1.3 4.3E-05 46.7 27.4 322 25-393 84-496 (528)
21 3prl_A NADP-dependent glyceral 96.3 1.3 4.4E-05 46.3 28.2 324 24-393 69-481 (505)
22 3ifg_A Succinate-semialdehyde 96.3 1.3 4.3E-05 46.1 28.7 321 26-392 72-481 (484)
23 1o20_A Gamma-glutamyl phosphat 96.2 0.45 1.5E-05 48.6 20.6 329 23-393 33-420 (427)
24 4f3x_A Putative aldehyde dehyd 96.1 1.6 5.5E-05 45.5 25.7 320 24-392 82-494 (498)
25 3iwj_A Putative aminoaldehyde 96.0 1.5 5.1E-05 45.7 23.6 327 25-393 71-487 (503)
26 3ed6_A Betaine aldehyde dehydr 96.0 2 6.7E-05 45.1 28.8 322 24-392 92-507 (520)
27 2j6l_A Aldehyde dehydrogenase 95.9 1.9 6.6E-05 44.8 30.6 320 24-392 79-496 (500)
28 1vlu_A Gamma-glutamyl phosphat 95.9 0.71 2.4E-05 47.8 20.3 339 23-393 33-438 (468)
29 3lns_A Benzaldehyde dehydrogen 95.8 1.3 4.5E-05 45.4 21.8 326 24-393 48-455 (457)
30 3pqa_A Lactaldehyde dehydrogen 95.7 2.5 8.4E-05 43.9 24.7 328 25-396 55-465 (486)
31 3ek1_A Aldehyde dehydrogenase; 95.7 2.6 8.7E-05 44.1 29.4 280 81-392 130-499 (504)
32 3r64_A NAD dependent benzaldeh 95.7 2.5 8.6E-05 44.0 24.4 289 81-392 110-482 (508)
33 2d4e_A 5-carboxymethyl-2-hydro 95.6 2.3 7.9E-05 44.4 23.0 281 82-392 125-502 (515)
34 2imp_A Lactaldehyde dehydrogen 95.5 2.6 9E-05 43.4 27.5 318 26-393 66-477 (479)
35 3ju8_A Succinylglutamic semial 95.5 2.7 9.4E-05 43.5 29.8 255 110-390 132-466 (490)
36 1a4s_A ALDH, betaine aldehyde 95.4 3 0.0001 43.4 27.0 321 24-393 78-494 (503)
37 3i44_A Aldehyde dehydrogenase; 95.4 2.5 8.4E-05 44.1 22.2 318 24-391 83-494 (497)
38 2o2p_A Formyltetrahydrofolate 95.2 3.7 0.00013 43.0 23.7 323 24-392 96-514 (517)
39 3haz_A Proline dehydrogenase; 95.1 1.1 3.8E-05 51.0 19.8 285 79-392 608-984 (1001)
40 3sza_A Aldehyde dehydrogenase, 95.1 3.7 0.00013 42.3 22.6 326 23-393 37-446 (469)
41 3rh9_A Succinate-semialdehyde 94.5 5.3 0.00018 41.7 25.7 326 24-400 69-489 (506)
42 4f9i_A Proline dehydrogenase/d 94.4 3.6 0.00012 47.0 21.8 261 106-393 655-1008(1026)
43 3ty7_A Putative aldehyde dehyd 94.2 5.8 0.0002 40.8 25.2 318 26-392 67-474 (478)
44 3b4w_A Aldehyde dehydrogenase; 94.0 6.5 0.00022 40.8 27.1 322 23-392 67-479 (495)
45 3qan_A 1-pyrroline-5-carboxyla 94.0 7 0.00024 41.1 28.9 325 23-393 93-514 (538)
46 1uzb_A 1-pyrroline-5-carboxyla 93.9 7.2 0.00025 40.7 24.2 324 23-392 93-513 (516)
47 1ez0_A ALDH, aldehyde dehydrog 93.8 7.3 0.00025 40.5 23.5 261 111-394 130-482 (510)
48 1wnd_A Putative betaine aldehy 93.7 7.6 0.00026 40.3 28.2 315 24-392 80-492 (495)
49 2wme_A BADH, betaine aldehyde 90.7 17 0.0006 37.7 25.5 317 26-391 66-479 (490)
50 1uxt_A Glyceraldehyde-3-phosph 90.5 18 0.00062 37.5 25.1 320 26-393 77-490 (501)
51 1euh_A NADP dependent non phos 88.6 24 0.00081 36.2 26.1 321 26-392 62-471 (475)
52 2h5g_A Delta 1-pyrroline-5-car 82.3 2.6 8.9E-05 43.5 7.5 282 82-393 101-433 (463)
53 2y53_A Aldehyde dehydrogenase 69.4 6.6 0.00022 41.1 6.3 86 306-394 411-518 (534)
54 4e3x_A Delta-1-pyrroline-5-car 64.6 11 0.00037 40.0 6.9 257 111-393 193-549 (563)
55 3qfu_A 78 kDa glucose-regulate 44.8 24 0.00083 34.0 5.2 74 148-243 153-226 (394)
56 3i33_A Heat shock-related 70 k 34.3 41 0.0014 32.7 5.0 75 148-241 158-232 (404)
57 4gni_A Putative heat shock pro 31.2 45 0.0015 32.7 4.7 74 148-241 150-223 (409)
58 1dkg_D Molecular chaperone DNA 25.7 75 0.0026 30.6 5.1 75 148-244 135-209 (383)
59 1vr0_A Probable 2-phosphosulfo 22.8 48 0.0016 31.8 3.0 69 296-373 45-118 (247)
60 1jce_A ROD shape-determining p 22.3 1.1E+02 0.0037 29.0 5.4 74 147-243 94-167 (344)
61 3ohs_X Trans-1,2-dihydrobenzen 20.8 4.4E+02 0.015 24.8 9.4 38 294-331 80-122 (334)
No 1
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=100.00 E-value=1.6e-167 Score=1279.36 Aligned_cols=420 Identities=48% Similarity=0.776 Sum_probs=404.6
Q ss_pred eEEEcCCCCHHHHHHHhcCCCC-CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCC--CCCHHH
Q 013679 2 KSYRLSELTHAEVQSLKARPRI-DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDP--ELDAAV 78 (438)
Q Consensus 2 ~~~~~~~~~~~~~~~~l~R~~~-~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a--~l~~~~ 78 (438)
.+++|...+...+..++.|+.. +..++.++|++||++||++||+||++||+|||++++++|+||++||++| ++|+++
T Consensus 5 ~~~~~~~~~~~~~~~l~~r~~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~l~Vs~~ei~~A~~~~~~~~ 84 (434)
T 1kae_A 5 TIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDEL 84 (434)
T ss_dssp SEEEGGGSCHHHHHHHTCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSSCCCCSBCCHHHHHHHHHHSCHHH
T ss_pred hhhccccCCHHHHHHHhcCcccccHHHHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCccccccCHHHHHHHHHhCCHHH
Confidence 4667777777777777777655 5579999999999999999999999999999999999999999999998 999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCC
Q 013679 79 KEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPS 158 (438)
Q Consensus 79 ~~ai~~A~~nI~~fh~~q~~~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~ 158 (438)
++||+.|++||++||++|++++|.++..+|++|||||+||+|||||||||+++|||||||++||||||||++|||||||
T Consensus 85 ~~ai~~A~~nI~~fH~~Q~~~~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvLM~aiPAkVAGV~~Iv~~tPp- 163 (434)
T 1kae_A 85 KQAMAVAVKNIETFHTAQKLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPP- 163 (434)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCTHHHHHHHHHHHHHTCSEEEEEECS-
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEEecCCcEEEEEEeehheEEEEecCCCCCchhHHHHhhccHhhcCCCeEEEECCC-
Confidence 9999999999999999999999888888899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHcCCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHh---cCCCCcccccCCCCCc
Q 013679 159 QDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMIL---QNSEAMISIDMPAGPS 235 (438)
Q Consensus 159 ~~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v---~~~~~~VgID~~AGPS 235 (438)
++||.+|+||++|||||||++|||||||||||||||||||||||||||+||++|||+| ++ .|||||+||||
T Consensus 164 ---~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G---~VgIDm~AGPS 237 (434)
T 1kae_A 164 ---PIADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD---GAAIDMPAGPS 237 (434)
T ss_dssp ---SCCHHHHHHHHHTTCCEEEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTT---SCEESCCCCCC
T ss_pred ---CCCHHHHHHHHHcCCCEEeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcC---ccccCCCCCCc
Confidence 5999999999999999999999999999999999999999999999999999999988 55 59999999999
Q ss_pred eEEEEecCCCCHHHHHHhhhhccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCCHHHHHHhhcCCeEEEeCCHHHH
Q 013679 236 EVLVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALGHSFMVFARDMLEG 315 (438)
Q Consensus 236 EvlIiAD~~Anp~~vAaDLLaQAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~~g~ii~v~~l~ea 315 (438)
||+||||++|||+|||+||||||||||+|++||||+|++|+ ++|.++|++||+.|||++|+++||++..+|+|+|++||
T Consensus 238 EilViAD~tAnp~~vAaDLLsQAEHd~~a~aiLvT~s~~la-~~V~~ev~~ql~~lpr~~ia~~sl~~~~ii~v~~l~ea 316 (434)
T 1kae_A 238 EVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPAADMA-RRVAEAVERQLAELPRAETARQALNASRLIVTKDLAQC 316 (434)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHTTCTTCEEEEEESCHHHH-HHHHHHHHHHHTTCTTHHHHHHHHTTCEEEECSSHHHH
T ss_pred eEEEEeCCCCCHHHHHHHHHHHhccCCCCcEEEEECCHHHH-HHHHHHHHHHHHhCChHHHHHHHHHcCeEEEECCHHHH
Confidence 99999999999999999999999999999999999999996 99999999999999999999999985599999999999
Q ss_pred HHHhhhhccccceecccChHHHHhhcccccccccCCCCcccccccccCCCCCCCCCCccccccCcccccccceeeEEEeC
Q 013679 316 ISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQSLT 395 (438)
Q Consensus 316 ~~~~N~~APEHLel~~~~p~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~~s 395 (438)
++++|+||||||||+++||++|+++|+|||+||||+||||++|||++||||||||+|+|||+|||||+||||++|+|+||
T Consensus 317 ~~~~N~~APEHLel~~~dp~~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT~G~AR~~sgLsV~~F~K~~s~~~~s 396 (434)
T 1kae_A 317 VEISNQYGPEHLIIQTRNARELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTVQELS 396 (434)
T ss_dssp HHHHHHHCCSEEEEESTTHHHHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCCTTGGGTCCCSCGGGGEEEEEEEEEC
T ss_pred HHHHHHhhhHhhhhhhcCHHHHHhhcCcccchhcCCCCchhhcccccCCCcccCCCCceeccCCCcHHhccceeeEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHhhCCHHHHHHHHHHHHhh
Q 013679 396 EEGLKKLGPYVATMAEIEGLEAHKRAVTFRLQDI 429 (438)
Q Consensus 396 ~~~~~~~~~~~~~lA~~EGL~aHa~sv~~R~~~~ 429 (438)
++|++++++++.+||++|||++|++|+++|+++.
T Consensus 397 ~~~l~~l~~~~~~lA~~EGL~aHa~av~~R~~~~ 430 (434)
T 1kae_A 397 KEGFSALASTIETLAAAERLTAHKNAVTLRVNAL 430 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999754
No 2
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=100.00 E-value=1.4e-162 Score=1240.92 Aligned_cols=410 Identities=35% Similarity=0.532 Sum_probs=357.0
Q ss_pred CeEEEcCCCCHH-HHHHHhcCCCCCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCC---ceeeCCCCCCCC--CC
Q 013679 1 MKSYRLSELTHA-EVQSLKARPRIDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLE---KVVENVSELPDP--EL 74 (438)
Q Consensus 1 m~~~~~~~~~~~-~~~~~l~R~~~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~---~l~V~~~e~~~a--~l 74 (438)
|++++..+.++. ++.+++.|+..++.++.++|++||++||++||+||++||+|||+++++ .|+||++||++| .+
T Consensus 7 ik~L~~~~~~f~~~l~~ll~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~~l 86 (423)
T 4gic_A 7 IKRLYTGDADFASQLDRLLAWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQAL 86 (423)
T ss_dssp CEEEETTCTTHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHHTS
T ss_pred eEEecCCCCCHHHHHHHHhcccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHhhC
Confidence 566777766654 468889998888999999999999999999999999999999999764 599999999998 99
Q ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCceEEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEe
Q 013679 75 DAAVKEAFDVAYNNIYAFHLAQKSAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLA 154 (438)
Q Consensus 75 ~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~ 154 (438)
|+++++||+.|++||++||++|++++|.+++.+|+++||||+||+|||||||||+|+|||||||++||||||||++||||
T Consensus 87 ~~~~~~ai~~A~~~I~~fh~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM~aiPAkVAGV~~Iv~~ 166 (423)
T 4gic_A 87 PAEQAKALREAAERIRAYAERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSVLMNAVPAKVAGVPELIMA 166 (423)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHHHHhhccHHHhCCCeEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCHHHHHHHHHcCCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCC
Q 013679 155 TPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGP 234 (438)
Q Consensus 155 TPP~~~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGP 234 (438)
||| ++|++||.+|+||++|||+|||++|||||||||||||||||||||||||||+||++|||+|++ .|||||+|||
T Consensus 167 tPp-~~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g---~VgIDm~AGP 242 (423)
T 4gic_A 167 VPA-PRGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG---QVGIDMVAGP 242 (423)
T ss_dssp CCC-GGGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT---TBEECCCCCC
T ss_pred cCC-CCCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC---CcCccccccc
Confidence 999 689999999999999999999999999999999999999999999999999999999998876 4999999999
Q ss_pred ceEEEEecCCCCHHHHHHhhhhccCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCCHHHHHHhhc-CCeEEEeCCHH
Q 013679 235 SEVLVIADIYASPVHIAADLLSQAEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPRGEFASKALG-HSFMVFARDML 313 (438)
Q Consensus 235 SEvlIiAD~~Anp~~vAaDLLaQAEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r~~ia~~sl~-~g~ii~v~~l~ 313 (438)
|||+||||++|||+|||+||||||||||+|++||||+|++++ ++|.++|++||+.|||++|+++||+ +|.+|+|+|++
T Consensus 243 SEilViAD~~a~p~~vAaDLlsQAEHd~~a~~iLvT~s~~la-~~V~~~i~~~l~~l~r~~i~~~sl~~~g~ii~v~~~~ 321 (423)
T 4gic_A 243 SEILVISDGRTDPDWIAMDLFSQAEHDEDAQAILISPDAAHL-EAVQASIERLLPGMERAEVIRTSLERRGGMILVDDLE 321 (423)
T ss_dssp CEEEEEECSCSCHHHHHHHHHHHHTTCTTCEEEEEESCHHHH-HHHHHHHHHHGGGCTTHHHHHHHHHHHCEEEECSSHH
T ss_pred ceEEEEeCCCCCHHHHHHHHHHhhccCCCCeEEEEeCcHHHH-HHHHHHHHHHHhhCccHHHHHHHHhcCceEEEEeehH
Confidence 999999999999999999999999999999999999999996 9999999999999999999999998 69999999999
Q ss_pred HHHHHhhhhccccceecccChHHHHhhcccccccccCCCCcccccccccCCCCCCCCCCccccccCcccccccceeeEEE
Q 013679 314 EGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 314 ea~~~~N~~APEHLel~~~~p~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
||++++|+||||||||+++||++|+++|+|||+||||+||||++|||++||||||||+|+|||+|||||+||||++|+|+
T Consensus 322 ea~~~~N~~APEHLel~~~~~~~~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~G~Ar~~sgLsv~~F~K~~s~~~ 401 (423)
T 4gic_A 322 QAAAVANRIAPEHLELSVESPEVLVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSLIY 401 (423)
T ss_dssp HHHHHHHHHCCSEEEEESSCHHHHGGGCCCCSEEEEC----------------CCCCTTGGGTCCCCCGGGGEEEEEEEC
T ss_pred HHHHHHHhhChHHhhhhhCCHHHHHhhCcEeceeecCCCCchhhhhcCcCCCccCCCCCcccccCCCCHHHeeeeeeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCHHHHHhhhHHHHHHHHhhCC
Q 013679 394 LTEEGLKKLGPYVATMAEIEGL 415 (438)
Q Consensus 394 ~s~~~~~~~~~~~~~lA~~EGL 415 (438)
+|++|++++++++.+||++|||
T Consensus 402 ~s~~~l~~l~~~~~~lA~~EgL 423 (423)
T 4gic_A 402 CSPDGADQLGRTASLLAWGEGL 423 (423)
T ss_dssp ----------------------
T ss_pred ECHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999998
No 3
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=97.47 E-value=0.031 Score=57.73 Aligned_cols=331 Identities=16% Similarity=0.143 Sum_probs=191.5
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS 102 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~ 102 (438)
.+.++..+.++.+-+.++++-|+=....++...+-. ......-...+.+++..+.+..+... .
T Consensus 31 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----------------~e~~~~~~~~~~~~~~~~~~~~~~~g-~ 93 (464)
T 3k9d_A 31 MSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGI----------------WQDKVIKNVFASKHVYNYIKDMKTIG-M 93 (464)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSC----------------HHHHHHHHHHHHHHHHHHHTTCCCSE-E
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCH----------------HHHHHHHHHHHHHHHHHhhhcccccc-e
Confidence 344555666777777777776665444454444210 01111124566677776665443322 1
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHHH--------HHHHHH
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKEV--------LYCAKK 173 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i--------L~AA~l 173 (438)
+...+|...-.++.|+.-|++..|- -||- +++..++||-.+|..= ++-|.. ..|.+ ..++..
T Consensus 94 ~~~~~~~~~~~~~~P~GVv~~I~P~---N~P~~~~~~~~~~ALaaGN~V--VlKps~----~ap~t~~~l~~ll~~~~~~ 164 (464)
T 3k9d_A 94 LKEDNEKKVMEVAVPLGVVAGLIPS---TNPTSTVIYKTLISIKAGNSI--VFSPHP----NALKAILETVRIISEAAEK 164 (464)
T ss_dssp EEEETTTTEEEEEEECCEEEEEECS---SSHHHHHHHHHHHHHHTTCEE--EEEECG----GGHHHHHHHHHHHHHHHHH
T ss_pred eccCCCceeEEEEecceEEEEECCC---cChHHHHHHHHHHHHHhCCeE--EEECCc----chHHHHHHHHHHHHHHHHH
Confidence 2223555666788999999999995 4664 4467888999999653 344431 33432 134566
Q ss_pred cCCch-hhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHh-cCCCCcccccCCCCCceEEEEecCCCCHH
Q 013679 174 AGVTH-ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMIL-QNSEAMISIDMPAGPSEVLVIADIYASPV 248 (438)
Q Consensus 174 ~Gv~e-Iy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v-~~~~~~VgID~~AGPSEvlIiAD~~Anp~ 248 (438)
+|+.+ ++.+ | |.+.-.+|.= -|.||+|.==|..-|. |... ... .| + -.|+.---+|-|++||.+
T Consensus 165 aG~P~gvv~vv~g~~~~~~~~L~~----~~~vd~I~fTGs~~v~--~~a~~~~k--pv-l--elG~G~~p~iV~~dADl~ 233 (464)
T 3k9d_A 165 AGCPKGAISCMTVPTIQGTDQLMK----HKDTAVILATGGSAMV--KAAYSSGT--PA-I--GVGPGNGPAFIERSANIP 233 (464)
T ss_dssp TTCCTTSEEECSSCCHHHHHHHHH----CTTEEEEEECSCHHHH--HHHTTSSS--CE-E--EBCCCCCEEEECTTSCHH
T ss_pred hCCCCCeEEEEeCCCHHHHHHHHh----CCCCCEEEEeCChHHH--HHHHhcCC--cE-E--eeCCCCCeEEECCCCCHH
Confidence 77764 3322 3 5666666652 4789999866665442 2222 111 13 3 344444556778889999
Q ss_pred HHHHhhhhccCcCC----CC-ceEEEecCchhhHHHHHHHHHHHHhcC---------------C-----------CHHHH
Q 013679 249 HIAADLLSQAEHGP----DS-QVVLVIVGDGVDLDAIEQEISKQCQSL---------------P-----------RGEFA 297 (438)
Q Consensus 249 ~vAaDLLaQAEHd~----~a-~~vLvt~s~~la~~~V~~ei~~ql~~l---------------~-----------r~~ia 297 (438)
..|-+++.-.=.+. .| +.+||- ++.. +++.+++.++...+ + ..+-+
T Consensus 234 ~Aa~~i~~~~~~n~Gq~C~a~~rvlV~--~~i~-d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i 310 (464)
T 3k9d_A 234 RAVKHILDSKTFDNGTICASEQSVVVE--RVNK-EAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHI 310 (464)
T ss_dssp HHHHHHHHHHTGGGGCSTTSCCEEEEE--HHHH-HHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCcEEEEe--HHHH-HHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHH
Confidence 98888775443332 12 345553 3453 67666666543110 0 11111
Q ss_pred HHhhc----C-----------------------C---eEEEeCCHHHHH----HHhhhhcccc-ceecccChH---HHHh
Q 013679 298 SKALG----H-----------------------S---FMVFARDMLEGI----SFSNLYAPEH-LIVNVKDAE---KWES 339 (438)
Q Consensus 298 ~~sl~----~-----------------------g---~ii~v~~l~ea~----~~~N~~APEH-Lel~~~~p~---~~l~ 339 (438)
.+-++ . | .++.++|+|||+ +++|..--=| ..|.++|.. .+..
T Consensus 311 ~~~~~~a~~~ga~vl~gg~~~v~~~~~~~~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~ 390 (464)
T 3k9d_A 311 ANLAGLTVPADARVLIAEETKVGAKIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFAL 390 (464)
T ss_dssp HHHTTCCCCTTCCEEEEECCCCSTTCGGGSCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHH
T ss_pred HHHhhhhhcCCCEEEEcCCCCCCCCCcccccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHH
Confidence 11111 1 2 245679999997 7888654434 677888865 4566
Q ss_pred hcccccccccCCCCc-ccccccccCCCCCCCCC----CccccccCcccccccceeeEEEeC
Q 013679 340 IIENAGSVFLGEWTP-ESVGDYASGTNHVLPTY----GYARMYGGVSLDSFLKYMTVQSLT 395 (438)
Q Consensus 340 ~i~nAGaiFlG~~sp-~a~GDY~aGpNHvLPT~----G~AR~~sgLsv~~FlK~~s~~~~s 395 (438)
+++ +|.||+..++. -..|+ ..+.+..||-+ |..++++.+++.+|+..-++.+-.
T Consensus 391 ~l~-~G~v~vN~~~~~~~~g~-~~~~~~~~~~G~G~~G~g~~~~~~~~~~~~~~k~v~~~~ 449 (464)
T 3k9d_A 391 KKP-VSRLLVNTPGALGGIGA-TTNLVPALTLGCGAVGGSSSSDNIGPENLFNIRRIATGV 449 (464)
T ss_dssp HSS-EEEEEESSCHHHHHTTS-SSSSCCCSCBBCTGGGTCSCCSBCCGGGSEEEEEEEECC
T ss_pred hCC-EeEEEEECCcccccccc-CCCCCccccccCcCCCCCcCCCCCCHHHheEEEEEEecC
Confidence 665 89999997654 23453 23344455554 667888888999999877776543
No 4
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=97.35 E-value=0.044 Score=56.34 Aligned_cols=327 Identities=15% Similarity=0.124 Sum_probs=168.5
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV 103 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~ 103 (438)
..++..+.++.+-+.++++.++=..-.++..-+- +.+....-+..+.+.++++...++... .+
T Consensus 27 ~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~----------------~~e~~~~~~~~a~~~~~~~~~~~~~~g-~~ 89 (452)
T 3my7_A 27 SQEQVDKIFRAASLAANQARIPLAQQAVEESGMG----------------IVEDKVIKNHFASEFIYNKYKDEQTCG-IL 89 (452)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCS----------------CHHHHHHHHHHHHHHHHHHHTTCCCSE-EC
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----------------HHHHHHHHHHHHHHHHHHHhhhccccc-cc
Confidence 3445556666666666666665444444433321 111111124567777765555443221 11
Q ss_pred EecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHH--------HHHHHHc
Q 013679 104 ENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV--------LYCAKKA 174 (438)
Q Consensus 104 ~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i--------L~AA~l~ 174 (438)
...++...-.++.|+.-|++.+|- -|| ++++..++||-.+|..=| +-|.. ..|.+ ..++..+
T Consensus 90 ~~~~~~~~~~~~~P~GVv~~I~P~---N~P~~~~~~k~~~ALaaGN~VV--lKps~----~tp~~~~~~~~~~~~a~~~a 160 (452)
T 3my7_A 90 EEDDNLGTMTIAEPVGIICGIVPT---TNPTSTAIFKSLISLKTRNGII--FSPHP----RAKNSTNDAAKLVLDAAVAA 160 (452)
T ss_dssp -------CEEEEEECCEEEEEECT---TSTTHHHHHHHHHHHHTTCEEE--EEECG----GGHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCceEEEecCceEEEEEcCC---CChHHHHHHHHHHHHhcCCeEE--EEcCC----CchHHHHHHHHHHHHHHHHc
Confidence 222333345678999999999995 355 455677889999996544 34431 23322 1233457
Q ss_pred CCch-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHH
Q 013679 175 GVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 250 (438)
Q Consensus 175 Gv~e-Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~v 250 (438)
|+.+ ++. -| |.+.-.+|.= -|.||+|.==|..=+. |..... +.--+ .-|+.---+|-|++||.+..
T Consensus 161 G~P~gvv~~v~g~~~~~~~~L~~----~p~v~~V~fTGs~~~~--~~a~~~--~kp~~--~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 161 GAPKDIIGWIDQPSVELSNALMK----HDDIALILATGGPGMV--KAAYSS--GKPAI--GVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp TCCTTSEEECSSCCHHHHHHHHH----CTTCCEEEECSCHHHH--HHHHTS--SSCEE--ECC--CEEEEECTTSCHHHH
T ss_pred CCCcCcEEEEcCCCHHHHHHHHh----CCCccEEEEECcHHHH--HHHHhc--CCCEE--ecCCCCCeEEEeCCCCHHHH
Confidence 7753 332 24 5665555542 5789998755554332 222111 00112 22333445667888999999
Q ss_pred HHhhhhccCcCCC----Cc-eEEEecCchhhHHHHHHHHHH----------------HHhcCC----------CHHHHHH
Q 013679 251 AADLLSQAEHGPD----SQ-VVLVIVGDGVDLDAIEQEISK----------------QCQSLP----------RGEFASK 299 (438)
Q Consensus 251 AaDLLaQAEHd~~----a~-~vLvt~s~~la~~~V~~ei~~----------------ql~~l~----------r~~ia~~ 299 (438)
+.+++.-+=++.- |. .++|-. +.. +++.+++.+ ++.... +..++..
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~--~i~-d~f~~~l~~~~gpli~~~~~~~v~~~i~~~~~~~a~v~G~~~~~~~~~ 307 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVD--EVY-DEVKERFASHKAHVLSKTDADKVRKVLLIDGALNAKIVGQPATAIAEM 307 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEG--GGH-HHHHHHHHTTTEEECCHHHHHHHHHHHEETTEECGGGTTCCHHHHHHH
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcH--HHH-HHHHHHHHHhCCCcCCHHHHHHHHHHHHhhcccCCeEecCccchhHHh
Confidence 9998876555442 22 344432 343 665555443 222110 0111110
Q ss_pred ------------------------hh--c-CC---eEEEeCCHHHHHHHhhhh-----ccccceecccChH---H---HH
Q 013679 300 ------------------------AL--G-HS---FMVFARDMLEGISFSNLY-----APEHLIVNVKDAE---K---WE 338 (438)
Q Consensus 300 ------------------------sl--~-~g---~ii~v~~l~ea~~~~N~~-----APEHLel~~~~p~---~---~l 338 (438)
.+ + .| .++.++|+|||++++|.. -+--..|+++|.. . +.
T Consensus 308 ~G~~v~pt~~vl~~~~~~~v~~~~~~~~E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a 387 (452)
T 3my7_A 308 AGVKVPADTKVLIGEGLGKVSYDDAFAHEKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFG 387 (452)
T ss_dssp HTCCCCTTCCEEEEECSSSCCTTCGGGSCCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHH
T ss_pred CCceeCCCeeEEeeccccCCCCcchhhcCccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHH
Confidence 01 1 13 345689999999999997 4566889998843 4 66
Q ss_pred hhcccccccccCCCCcccccccccCCCCCCC------CCCc--cccccCcccccccceeeEE
Q 013679 339 SIIENAGSVFLGEWTPESVGDYASGTNHVLP------TYGY--ARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 339 ~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLP------T~G~--AR~~sgLsv~~FlK~~s~~ 392 (438)
.+++ +|.|++.. |.++|-+-...|+.|| ++.+ --.+..+++.+||...++-
T Consensus 388 ~~l~-~G~V~VN~--~~~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~v~ 446 (452)
T 3my7_A 388 DKMK-TARILINI--PTTHGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKTVA 446 (452)
T ss_dssp HHCC-CSEEEESC--CCC----------------------------CCCCCGGGGEEEEEEE
T ss_pred HhCC-EEEEEECC--CCCCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeEEE
Confidence 6775 99999997 4556544444454443 3222 2335668999998665554
No 5
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=97.18 E-value=0.06 Score=55.31 Aligned_cols=330 Identities=13% Similarity=0.131 Sum_probs=178.5
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEE-
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE- 104 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~- 104 (438)
.+-.+..+.+.+.++++.|+=....++.+.+-.... +++...++..+. ..-+..+++.++.|...-.+......
T Consensus 48 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g--~~ea~~~~~~~~---~~~v~~~~~~l~~~a~~~~~~g~~~~~ 122 (444)
T 4ghk_A 48 AAKNAALEAVARAIERDAGALKAANARDVARAKDKG--LDAAFVDRLTLS---DKALKTMVEGLRQVATLPDPIGEMSNL 122 (444)
T ss_dssp HHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC--------CCSHHHHHCCC---TTHHHHHHHHHHHHHHSCCCTTCEEEE
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhcc--chHHHHHHhhcc---HHHHHHHHHHHHHHHhhccccCccCCc
Confidence 344555666667777777765555555554321000 111110000000 01366677778888654332221111
Q ss_pred --ecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHH---HHHH-----HHc
Q 013679 105 --NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEV---LYCA-----KKA 174 (438)
Q Consensus 105 --~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i---L~AA-----~l~ 174 (438)
..+|...-.++.|+.-|++..|- . |...++-.+||-.||+.= |+-|.. ..|.+ |+-. ..+
T Consensus 123 ~~~~~~~~~~~~~~P~GVV~~I~p~---n-P~~~~~~~~~ALaaGN~V--VlKps~----~tp~t~~~l~~l~~~~l~~a 192 (444)
T 4ghk_A 123 KYRPSGIQVGQMRVPLGVIGIIYES---R-PNVTIDAAALCLKSGNAT--ILRGGS----EALESNTALAKLIGEGLAEA 192 (444)
T ss_dssp EECTTSCEEEEEEEECSEEEEECCS---C-HHHHHHHHHHHHHTTCEE--EEECCG----GGHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCccceEEEeccEEEEEEeCC---C-cHHHHHHHHHHHHcCCEE--EEECCc----cchHHHHHHHHHHHHHHHHc
Confidence 13566677789999999999994 2 667778889999999753 344432 34432 2211 456
Q ss_pred CCc-hhhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhc--CCCCcccccCCCCCceEEEEecCCCCHH
Q 013679 175 GVT-HILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQ--NSEAMISIDMPAGPSEVLVIADIYASPV 248 (438)
Q Consensus 175 Gv~-eIy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~--~~~~~VgID~~AGPSEvlIiAD~~Anp~ 248 (438)
|+. .++.+ | |...++.+- .+-|+||+|.=-|..=|- |++.. .. .| +=-+-|=+= +|-|++||.+
T Consensus 193 GlP~gvv~vv~g~~~~~~~~~L---~~~p~vd~V~fTGs~~vg--~~v~~~a~~--pv-~lELGGk~p--~IV~~dADl~ 262 (444)
T 4ghk_A 193 GLPQDTVQVVETADRAAVGRLI---TMTEYVDVIVPRGGKSLI--ERLINEARV--PM-IKHLDGICH--VYVDDRASVT 262 (444)
T ss_dssp TCCGGGEEECCCCCTHHHHHHT---TCTTTCSEEEECSCHHHH--HHHHHHCCS--CB-CCCCCCCCE--EEECTTCCHH
T ss_pred CCCcccEEEEeCCCHHHHHHHH---hcCCCccEEEEECcHHHH--HHHHHhCCC--CE-EEEcCCcCe--EEECCCCCHH
Confidence 764 34432 3 554444322 134889999877765332 22111 00 01 111233333 4446679999
Q ss_pred HHHHhhhhccCcCC---CCceEEEecCchhhHHHHHHHHHHHHhcCCC--------HHHHHHh------------hc---
Q 013679 249 HIAADLLSQAEHGP---DSQVVLVIVGDGVDLDAIEQEISKQCQSLPR--------GEFASKA------------LG--- 302 (438)
Q Consensus 249 ~vAaDLLaQAEHd~---~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r--------~~ia~~s------------l~--- 302 (438)
..|..++.-+=... .|...++.. ++.. +++.+.+.+.++.+.- ...+..+ +.
T Consensus 263 ~Aa~~i~~~~~~n~G~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~~~~g~p~~~~~i~~a~~G~~~~~~~~~~~eEi 340 (444)
T 4ghk_A 263 KALTVCDNAKTHRYGTCNTMETLLVA-RGIA-PAVLSPLGRLYREKGVELRVDADARAVLEAAGVGPLVDATDEDWRTEY 340 (444)
T ss_dssp HHHHHCC---------CCCCCEEEEE-GGGH-HHHHHHHHHHHHHTTCEEEECHHHHHHHHHTTCCCCEECCSGGGTCC-
T ss_pred HHHHHHHHHhcCCCcccCcCceEEEe-HHHH-HHHHHHHHHHHHHcCCeecCCHHHHHHHHhcccCcccCCCchhhhccc
Confidence 88877664332222 222223332 2343 7777777776665532 2444444 21
Q ss_pred CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCCCCcc-
Q 013679 303 HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYA- 374 (438)
Q Consensus 303 ~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~A- 374 (438)
.| .|+.++|+|||++++|..--=| ..|.++|.. .+..++ .+|.|++..++.. +.-+|-+|..
T Consensus 341 FGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l-~aG~V~vN~~~~~---------~~~~pfGg~~~ 410 (444)
T 4ghk_A 341 LAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREV-DSASVMVNASTRF---------ADGFEFGLGAE 410 (444)
T ss_dssp --CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHC-CSSEEEEEECGGG---------CSTTTTTCSCC
T ss_pred cCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhC-CcceEEEcCCCcc---------CCCCCcCCccc
Confidence 13 3456899999999999863322 566777765 456666 4999999976541 1235655443
Q ss_pred --------ccccCcccccccceeeEE
Q 013679 375 --------RMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 375 --------R~~sgLsv~~FlK~~s~~ 392 (438)
|+.|..+++.|+..-++.
T Consensus 411 sG~g~~~~~~~G~~gl~~~t~~K~v~ 436 (444)
T 4ghk_A 411 IGISNDKLHARGPVGLEGLTSLKYVV 436 (444)
T ss_dssp SEEECCSSSCCEEECGGGGEEEEEEE
T ss_pred ccccCCcccCCChhHHHhhceEEEEE
Confidence 445677888888776654
No 6
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=97.09 E-value=0.17 Score=52.06 Aligned_cols=318 Identities=13% Similarity=0.146 Sum_probs=177.5
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc--CCCc
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQK--SAET 101 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~--~~~~ 101 (438)
...+-.+..+++-+.++++.|+=..-.++..-+. -.+.+.-+..+++.++.|.+... ....
T Consensus 49 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~~a~~ev~~~~~~~~~~a~~~~~~~~~~ 111 (462)
T 3etf_A 49 SVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP-----------------IKQARAEVTKSAALCDWYAEHGPAMLNPE 111 (462)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHHTSCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHhHHHhcCCc
Confidence 3445556677777777777776655555555431 01222234455555555443211 1111
Q ss_pred eEEecCceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHcCC
Q 013679 102 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGV 176 (438)
Q Consensus 102 ~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~Gv 176 (438)
....+|...-.++.|+.-|++..|- -||- ..+..++||-.||+.=|+ -|.. ..|. +......+|+
T Consensus 112 -~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~Vvl--Kps~----~tp~~~~~l~~~l~~agl 181 (462)
T 3etf_A 112 -PTLVENQQAVIEYRPLGVILAIMPW---NFPLWQVLRGAVPILLAGNSYLL--KHAP----NVTGCAQMIARILAEAGT 181 (462)
T ss_dssp -ECSSGGGCEEEEEEECSEEEEECCS---SSTTHHHHHHHHHHHHTTCEEEE--ECCT----TCHHHHHHHHHHHHHTTC
T ss_pred -ccCCCCceeEEEeecCcEEEEECCC---chHHHHHHHHHHHHHhcCCEEEE--ECCC----CCcHHHHHHHHHHHHhCC
Confidence 1223455566788999999999995 3443 344457899999985443 3432 3343 2234555676
Q ss_pred ch-hhh--cchHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCceEEEEecCCCCH
Q 013679 177 TH-ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASP 247 (438)
Q Consensus 177 ~e-Iy~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp 247 (438)
.. ++. -|+.....+|. +-|+||+|.=-|..=|- +|+.+- .|-..+ -|-+= +|-|++||.
T Consensus 182 P~gv~~vv~g~~~~~~~l~----~~~~v~~v~fTGS~~~g~~i~~~aa~~~~-----~v~lEl-GGk~p--~iV~~dADl 249 (462)
T 3etf_A 182 PAGVYGWVNANNEGVSQMI----NDPRIAAVTVTGSVRAGAAIGAQAGAALK-----KCVLEL-GGSDP--FIVLNDADL 249 (462)
T ss_dssp CBTTEEECCCCHHHHHHHH----TSTTEEEEEEESCHHHHHHHHHHHHHTTC-----CEEEEC-CCCEE--EEECTTSCH
T ss_pred CcCeEEEEECCHHHHHHHh----cCCCCCEEEEeCCchHHHHHHHHHhccCC-----ceEEEc-CCCCc--cEECCCCCH
Confidence 43 221 35555556654 35899999766654332 222110 022221 14443 444667999
Q ss_pred HHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhh
Q 013679 248 VHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKAL 301 (438)
Q Consensus 248 ~~vAaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl 301 (438)
+..+..++.-+=+ .-.+...++.. ++.. +++.+.+.+.++.+. . .+.++.+.
T Consensus 250 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~ 327 (462)
T 3etf_A 250 ELAVKAAVAGRYQNTGQVCAAAKRFIVE-EGIA-QAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASV 327 (462)
T ss_dssp HHHHHHHHHHHHGGGGCCTTCEEEEEEE-HHHH-HHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcccCCcEEEEe-hhHH-HHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHH
Confidence 9877776643322 22344444443 3453 666666666665432 0 12222222
Q ss_pred c--------------------------------------CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---H
Q 013679 302 G--------------------------------------HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---K 336 (438)
Q Consensus 302 ~--------------------------------------~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~ 336 (438)
+ .| .++.++|+|||++++|..--=| ..|.++|.. .
T Consensus 328 ~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~ 407 (462)
T 3etf_A 328 AEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAE 407 (462)
T ss_dssp HTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHH
T ss_pred HCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 1 12 2355789999999999864333 667788864 5
Q ss_pred HHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEE
Q 013679 337 WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 337 ~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 392 (438)
+..+++ +|.|++..+.. .+.-+|-+ |..|..|..+++.|+..-++.
T Consensus 408 ~~~~l~-aG~v~vN~~~~---------~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~ 458 (462)
T 3etf_A 408 MAARLE-CGGVFINGYSA---------SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVW 458 (462)
T ss_dssp HHHHCC-SSEEEESSCCC---------CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHhCC-cceEEECCCCC---------CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEE
Confidence 666765 99999997642 12345544 456677777888887766653
No 7
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=97.02 E-value=0.42 Score=49.66 Aligned_cols=324 Identities=16% Similarity=0.130 Sum_probs=176.9
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCc
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AET 101 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~-~~~ 101 (438)
....+-.+..+.+-+.++++.|+=..-.++..-+. +. +.+.-+..+++.++.|.+.... ...
T Consensus 67 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~-ea~~ev~~~~~~~~~~a~~~~~~~g~ 129 (487)
T 2w8n_A 67 VSAKERSSLLRKWYNLMIQNKDDLARIITAESGKP----------------LK-EAHGEILYSAFFLEWFSEEARRVYGD 129 (487)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HH-HHHHHHHHHHHHHHHHHHHGGGCCCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------HH-HHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 33445556667777777777776555555554321 01 1112266777777777653222 111
Q ss_pred eEEe-cCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch-
Q 013679 102 SVEN-MKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH- 178 (438)
Q Consensus 102 ~~~~-~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e- 178 (438)
.... .+|...-.++.|+.-|++..|- .+|+ ...+...+||-.||+.=|+ =|.. .-.... .+......+|...
T Consensus 130 ~~~~~~~~~~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~VVl--Kps~-~tp~t~~~l~~l~~~aGlP~g 204 (487)
T 2w8n_A 130 IIHTPAKDRRALVLKQPIGVAAVITPW-NFPS-AMITRKVGAALAAGCTVVV--KPAE-DTPFSALALAELASQAGIPSG 204 (487)
T ss_dssp EECCSCTTCEEEEEEEECCEEEEECCS-SSTT-HHHHHHHHHHHHHTCEEEE--ECCT-TCCHHHHHHHHHHHHHTCCTT
T ss_pred ccccCCCCceeEEEEecceEEEEECCC-cchH-HHHHHHHHHHHHcCCEEEE--ECCC-cchHHHHHHHHHHHHhCCCCC
Confidence 1111 2465666788999999999994 2333 3445678899999985443 3432 111222 2334555667653
Q ss_pred hhhc-----c-hHHHHHHHhhcCCCCCCceEEecCCcHH------HHHHHHHhcCCCCcccccCCCCCceEEEEecCCCC
Q 013679 179 ILKA-----G-GAQAISAMAWGTESCPKVEKIFGPGNQY------VTAAKMILQNSEAMISIDMPAGPSEVLVIADIYAS 246 (438)
Q Consensus 179 Iy~v-----G-GAQAIAAlAyGTetIp~VDkIvGPGN~y------V~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~An 246 (438)
++.+ | |.+.-.+|. .-|.||+|.==|..= -++|+.+. .|-.. +-|-+ -+|-|++||
T Consensus 205 vv~vv~~~~g~~~~~~~~L~----~~~~v~~V~fTGS~~~g~~i~~~aa~~~~-----pv~lE-lGGk~--p~iV~~dAD 272 (487)
T 2w8n_A 205 VYNVIPCSRKNAKEVGEAIC----TDPLVSKISFTGSTTTGKILLHHAANSVK-----RVSME-LGGLA--PFIVFDSAN 272 (487)
T ss_dssp SEEECCCCHHHHHHHHHHHT----TCTTEEEEEEEECHHHHHHHHHHHHTTTC-----EEEEE-ECEEE--EEEECTTSC
T ss_pred eEEEEecCCCCcHHHHHHHH----hCCCcCEEEEeCCHHHHHHHHHHHhccCC-----cEEEe-cCCCC--eEEECCCCC
Confidence 3221 5 555445554 358899997333322 22222111 01111 12333 355567799
Q ss_pred HHHHHHhhhhccCcCC----CCceEEEecCchhhHHHHHHHHHHHHhc-CC---------------CH-------HHHHH
Q 013679 247 PVHIAADLLSQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQS-LP---------------RG-------EFASK 299 (438)
Q Consensus 247 p~~vAaDLLaQAEHd~----~a~~vLvt~s~~la~~~V~~ei~~ql~~-l~---------------r~-------~ia~~ 299 (438)
.+..|-.++.-+=... .+...++.. ++.. ++..+.+.+.++. +. .. +.++.
T Consensus 273 l~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 350 (487)
T 2w8n_A 273 VDQAVAGAMASKFRNTGQTCVCSNQFLVQ-RGIH-DAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVND 350 (487)
T ss_dssp HHHHHHHHHHHHTCCCSCCCSEEEEEEEE-HHHH-HHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCccccCCEEEEc-ccHH-HHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHH
Confidence 9988777765332222 222333332 2233 5555555555544 31 00 11222
Q ss_pred hhc--------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccceecccChHH-
Q 013679 300 ALG--------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAEK- 336 (438)
Q Consensus 300 sl~--------------------------------------~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~~- 336 (438)
+.+ .| .++.++|+|||++++|..- +--..|.++|...
T Consensus 351 a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a 430 (487)
T 2w8n_A 351 AVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 430 (487)
T ss_dssp HHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHH
T ss_pred HHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHH
Confidence 210 01 2344789999999999852 2236677888754
Q ss_pred --HHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 337 --WESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 337 --~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
++.++ .+|.|++..++.. +..+|- +|..|+.|..+++.|+..-++.
T Consensus 431 ~~~~~~l-~aG~v~vN~~~~~---------~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~ 483 (487)
T 2w8n_A 431 WRVAEQL-EVGMVGVNEGLIS---------SVECPFGGVKQSGLGREGSKYGIDEYLELKYVC 483 (487)
T ss_dssp HHHHHHS-CSSEEEESCSCCC---------CTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEE
T ss_pred HHHHHhC-CeeeEEEcCCCCC---------CCCCCCCCCCCCCcCCCchHHHHHHhcCccEEE
Confidence 56666 5999999975432 112554 4567888888899998877764
No 8
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=96.98 E-value=0.3 Score=51.35 Aligned_cols=322 Identities=15% Similarity=0.100 Sum_probs=180.6
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc--cCCCce
Q 013679 25 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQ--KSAETS 102 (438)
Q Consensus 25 ~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q--~~~~~~ 102 (438)
..+-.+..+.+.+.++++.|+=..-.++..-+.. .+.+.-+..+++.++.|.... +...+.
T Consensus 85 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~ 147 (521)
T 4e4g_A 85 PQRRARVFMKFVQLLNDNMNELAEMLSREHGKTI-----------------DDAKGDIVRGLEVCEFVIGIPHLQKSEFT 147 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCH-----------------HHHHHHHHHHHHHHHHHHTHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 3444555666666667776665555555544321 111223566677777665421 111222
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHcCCch
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVTH 178 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~Gv~e 178 (438)
....+|...-.++.|+.-|++..|- .+|+- ..+.-.+||-.||+.=| +-|.. ..|. +......+|+.+
T Consensus 148 ~~~~~~~~~~~~~~P~GVV~~I~Pw-N~P~~-~~~~~~a~ALaaGN~VV--lKpse----~tp~t~~~l~~l~~eaGlP~ 219 (521)
T 4e4g_A 148 EGAGPGIDMYSIRQPVGIGAGITPF-NFPGM-IPMWMFAPAIACGNAFI--LKPSE----RDPSVPIRLAELMIEAGLPA 219 (521)
T ss_dssp EEEETTEEEEEEEEECCEEEEECCS-SCTTH-HHHHHHHHHHHTTCEEE--EECCT----TSTHHHHHHHHHHHHTTCCT
T ss_pred ccCCCCcceeEEEcCCcEEEEECCC-cchHH-HHHHHHHHHHHcCCEEE--EECCC----cchHHHHHHHHHHHHhCCCc
Confidence 2234577777889999999999994 33332 34456789999997544 33432 2332 223455666642
Q ss_pred -hhh--cchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 179 -ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 179 -Iy~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
++. -|+.....+|. .-|.||+|.==|..=| ++|+++.- |-.. +-|-+= +|-|++||.+.
T Consensus 220 gvv~vv~g~~~~~~~L~----~~p~vd~I~FTGS~~vG~~i~~~aa~~lkp-----v~lE-LGGk~p--~IV~~dADl~~ 287 (521)
T 4e4g_A 220 GILNVVNGDKGAVDAIL----THPDIAAVSFVGSTPIARYVYGTAAMNGKR-----AQCF-GGAKNH--MIIMPDADLDQ 287 (521)
T ss_dssp TSEEECCCCHHHHHHHH----TCTTCCEEEEESCHHHHHHHHHHHHHTTCE-----EEEE-CCCCEE--EEECTTSCHHH
T ss_pred CeEEEEeCChHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHHhhcCCC-----eeec-CCCCCe--EEEcCCCCHHH
Confidence 332 25555556665 2588999976665422 23332210 1111 123333 44566799998
Q ss_pred HHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcC
Q 013679 250 IAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH 303 (438)
Q Consensus 250 vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~ 303 (438)
.|-.++.-+ =.--.+...++....+.. +++.+.+.+.++.+.- .+.++.+.+.
T Consensus 288 Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~-d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~ 366 (521)
T 4e4g_A 288 AANALIGAGYGSAGERCMAISVAVPVGEETA-NRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQ 366 (521)
T ss_dssp HHHHHHHHHHGGGGCCTTSEEEEEEBSHHHH-HHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcccCeEEEEeCchHH-HHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHC
Confidence 777665322 122345555555444354 7777777777766531 1222222211
Q ss_pred ------------------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH--
Q 013679 304 ------------------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE-- 335 (438)
Q Consensus 304 ------------------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~-- 335 (438)
| .|+-++|+|||++++|..--=| ..|.++|..
T Consensus 367 Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a 446 (521)
T 4e4g_A 367 GAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAA 446 (521)
T ss_dssp TCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHH
T ss_pred CCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHH
Confidence 1 1233689999999999843222 556777764
Q ss_pred -HHHhhcccccccccCCCCcccccccccCCCCCCCC-----CCcc--ccccCcccccccceeeEEE
Q 013679 336 -KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYA--RMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 336 -~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~A--R~~sgLsv~~FlK~~s~~~ 393 (438)
.+..++ .+|.|++..++.. .+..+|= +|+. |..|..+++.|++.-++..
T Consensus 447 ~~~~~~l-~aG~V~vN~~~~~--------~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~ 503 (521)
T 4e4g_A 447 RDFASRI-NIGMVGVNVPIPV--------PLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITS 503 (521)
T ss_dssp HHHHHHC-CCSEEEESCSSCC--------CCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHHhC-CeeeEEECCCCCC--------CCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEE
Confidence 566666 5999999975432 1233554 4556 5667788889988777654
No 9
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=96.93 E-value=0.3 Score=51.03 Aligned_cols=320 Identities=16% Similarity=0.101 Sum_probs=175.2
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce---
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS--- 102 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~--- 102 (438)
.+-.+..+.+-+.++++.|+=..-.++..-+. +.+....-+..+++.++.|.+.- .+ |.
T Consensus 82 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~ea~~~ev~~~~~~~~~~a~~~-~~-~~g~~ 143 (500)
T 1o04_A 82 SHRGRLLNRLADLIERDRTYLAALETLDNGKP----------------YVISYLVDLDMVLKCLRYYAGWA-DK-YHGKT 143 (500)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HHHHHHTHHHHHHHHHHHHHHHT-TT-CCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----------------HHHHHHHHHHHHHHHHHHHHHHH-HH-hhCcc
Confidence 33445566666666666665555455444321 11111222556667777665432 21 21
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch-h
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-I 179 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e-I 179 (438)
+...+|...-.++.|+.-|++..|- -|| ...+.-.+||-.||+. ||+=|.. .-.... .+......+|+.+ +
T Consensus 144 ~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGN~--VVlKps~-~tp~t~~~l~~l~~~aGlP~gv 217 (500)
T 1o04_A 144 IPIDGDFFSYTRHEPVGVCGQIIPW---NFPLLMQAWKLGPALATGNV--VVMKVAE-QTPLTALYVANLIKEAGFPPGV 217 (500)
T ss_dssp ECCSSSEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCE--EEEECCT-TSCHHHHHHHHHHHHHTCCTTS
T ss_pred eecCCCceEEEEEecCCcEEEECCC---CchHHHHHHHHHHHHHcCCE--EEEECCc-cChHHHHHHHHHHHHhCCCcCe
Confidence 1223465666788999999999995 477 4555678899999986 3344442 111112 2233455666542 3
Q ss_pred hhc--c-hHHHHHHHhhcCCCCCCceEEe--cCCc----HHHHHH-HHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 180 LKA--G-GAQAISAMAWGTESCPKVEKIF--GPGN----QYVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 180 y~v--G-GAQAIAAlAyGTetIp~VDkIv--GPGN----~yV~~A-K~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
+.+ | |.+.-.+|. .-|+||+|. |--. ++.++| +.+. .|-.. +-|-+= +|-|++||.+.
T Consensus 218 v~vv~g~~~~~g~~L~----~~p~v~~I~FTGS~~~G~~i~~~aa~~~l~-----pv~lE-LGGk~p--~iV~~dADl~~ 285 (500)
T 1o04_A 218 VNIVPGFGPTAGAAIA----SHEDVDKVAFTGSTEIGRVIQVAAGSSNLK-----RVTLE-LGGKSP--NIIMSDADMDW 285 (500)
T ss_dssp EEECCBCTTTHHHHHH----TCTTCCEEEEESCHHHHHHHHHHHHHTTCC-----EEEEE-CCCCEE--EEECTTSCHHH
T ss_pred EEEEecCcHHHHHHHH----hCCCcCEEEEECCHHHHHHHHHhhhhhcCc-----eEEEE-cCCcCe--EEECCCCCHHH
Confidence 322 4 555445554 258899997 4322 133444 2111 01111 124443 44456689988
Q ss_pred HHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhhc-
Q 013679 250 IAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKALG- 302 (438)
Q Consensus 250 vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl~- 302 (438)
.|-.++.-+ =.--.+...++... +.. +++.+.+.+.++.+. . .+.++.+.+
T Consensus 286 Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~ 363 (500)
T 1o04_A 286 AVEQAHFALFFNQGQCSCAGSRTFVQE-DIY-DEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQE 363 (500)
T ss_dssp HHHHHHHHHHGGGGCCTTCEEEEEEEH-HHH-HHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCCCCCCCEEEEeh-hHH-HHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhC
Confidence 777765422 11223444444433 343 666666665555441 0 011111110
Q ss_pred -------------------------------------CC---eEEEeCCHHHHHHHhhhhcc-ccceecccChH---HHH
Q 013679 303 -------------------------------------HS---FMVFARDMLEGISFSNLYAP-EHLIVNVKDAE---KWE 338 (438)
Q Consensus 303 -------------------------------------~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~p~---~~l 338 (438)
.| .|+.++|+|||++++|..-- --..|.++|.. .++
T Consensus 364 Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~ 443 (500)
T 1o04_A 364 GAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLS 443 (500)
T ss_dssp TCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred CCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHH
Confidence 11 24457899999999998522 23567788864 466
Q ss_pred hhcccccccccCCCCcccccccccCCCCCCC-----CCCccccccCcccccccceeeEEE
Q 013679 339 SIIENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 339 ~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
.++ .+|.|++..++.. . .-+| .+|..|+.|..+++.|+..-++..
T Consensus 444 ~~l-~aG~V~iN~~~~~-------~--~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~ 493 (500)
T 1o04_A 444 QAL-QAGTVWVNCYDVF-------G--AQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTV 493 (500)
T ss_dssp HHC-CSSEEEESCSSCC-------C--TTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEE
T ss_pred HhC-CeeEEEECCCCCC-------C--CCCCCCCcCCCCCCccchHHHHHHhcceEEEEE
Confidence 666 4899999976431 1 1244 456678878888999998887653
No 10
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=96.82 E-value=0.31 Score=50.48 Aligned_cols=324 Identities=13% Similarity=0.085 Sum_probs=172.6
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-C-c
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-E-T 101 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~-~ 101 (438)
...+-.+..+.+.+.++++.|+=..-.++..-+. + .+.+.-+..+++.++.|.+...+- . +
T Consensus 64 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~-~~a~~ev~~~~~~~~~~a~~~~~~~~~~ 126 (485)
T 4dng_A 64 TTEDRKAVLQKARGYLHENRDDIIMMIARETGGT----------------I-IKSTIELEQTIAILDEAMTYTGELGGVK 126 (485)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------H-HHHHHHHHHHHHHHHHHHHHGGGCSCEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------H-HHHHHHHHHHHHHHHHHHHHHHHhCCee
Confidence 3445556667777777777776555555554421 1 122223666777777766543221 1 1
Q ss_pred e-EEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHH-----HHHHHHc
Q 013679 102 S-VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-----LYCAKKA 174 (438)
Q Consensus 102 ~-~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i-----L~AA~l~ 174 (438)
. ....+|...-.++.|+.-|++..|- -|| ...+...+||-.||+.=| +-|.. ..|.+ ..+...+
T Consensus 127 ~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VV--lKps~----~tp~~~~~~l~~~l~~a 197 (485)
T 4dng_A 127 EVPSDIEGKTNKIYRLPLGVISSISPF---NFPMNLSMRSIAPAIALGNSVV--HKPDI----QTAISGGTIIAKAFEHA 197 (485)
T ss_dssp CCCCSSTTEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCEEE--EECCG----GGHHHHTHHHHHHHHHT
T ss_pred ccccCCCCceEEEEEecceEEEEECCC---ccHHHHHHHHHHHHHHcCCEEE--EECCC----cChHHHHHHHHHHHHHh
Confidence 1 1123567788889999999999995 466 344557789999997544 34431 34432 2355667
Q ss_pred CCch-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCC
Q 013679 175 GVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIY 244 (438)
Q Consensus 175 Gv~e-Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~ 244 (438)
|+.+ ++. -| |.+.-.+|. .-|+||+|.==|..=| .+|+.+-- |-.. +-|-+= +|-|++
T Consensus 198 GlP~gvv~vv~g~~~~~~~~L~----~~p~v~~v~fTGS~~~g~~i~~~aa~~~~~-----v~lE-lGGk~p--~iV~~d 265 (485)
T 4dng_A 198 GLPAGVLNVMLTDVKEIGDGML----TNPIPRLISFTGSTAVGRHIGEIAGRAFKR-----MALE-LGGNNP--FAVLSD 265 (485)
T ss_dssp TCCTTSEEECCCCHHHHTTHHH----HCSSCSEEEEEECHHHHHHHHHHHHHHTCE-----EEEE-ECCCEE--EEECTT
T ss_pred CcCCCeEEEEeCCChhHHHHHH----hCCCCCEEEEECCcHHHHHHHHHHhhhccc-----hhhh-cCCCCc--eEEcCC
Confidence 6642 222 13 333334443 2478999874444322 22332210 1111 114443 444667
Q ss_pred CCHHHHHHhhhhccCcCC----CCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHH
Q 013679 245 ASPVHIAADLLSQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFAS 298 (438)
Q Consensus 245 Anp~~vAaDLLaQAEHd~----~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~ 298 (438)
||.+..|-.++.-+=... .|...++.. ++.. +++.+.+.+.++.+. . .+.++
T Consensus 266 ADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~ 343 (485)
T 4dng_A 266 ADVDRAVDAAIFGKFIHQGQICMIINRIIVH-QDVY-DEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIE 343 (485)
T ss_dssp SCHHHHHHHHHHHHTTCC----CCEEEEEEE-HHHH-HHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCccccCCEEEEe-HHHH-HHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHH
Confidence 999987777665442222 233334333 3453 777777766665541 0 12223
Q ss_pred HhhcC-----------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---H
Q 013679 299 KALGH-----------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---K 336 (438)
Q Consensus 299 ~sl~~-----------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~ 336 (438)
.+.+. | .++.++|+|||++++|..--=| ..|.++|.. .
T Consensus 344 ~a~~~Ga~v~~gg~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~ 423 (485)
T 4dng_A 344 QAKTDGIELAVEGKRVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEK 423 (485)
T ss_dssp HHHHTTCEEEECCCEETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHH
T ss_pred HHHHCCCEEEeCCCCCCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 22211 2 2455889999999999964333 557788875 4
Q ss_pred HHhhcccccccccCCCCccccccc-ccCCCCCCCCCCccccccCcccccccceeeEE
Q 013679 337 WESIIENAGSVFLGEWTPESVGDY-ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 337 ~l~~i~nAGaiFlG~~sp~a~GDY-~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
+..++ .+|.|++..++....... +.| ...+|+.|+.+..+++.|++.-++.
T Consensus 424 ~~~~l-~~G~v~vN~~~~~~~~~~pfGG----~~~SG~G~~~g~~~l~~~t~~k~v~ 475 (485)
T 4dng_A 424 FALQI-DSGMTHVNDQSVNDSPNIAFGG----NKASGVGRFGNPWVVEEFTVTKWIS 475 (485)
T ss_dssp HHTTS-CSSEEEESCC--------------------------CHHHHHHHEEEEEEE
T ss_pred HHHhc-CcceEEECCCCCCCCCCCCcCC----cCCCCCCccchHHHHHHhhceEEEE
Confidence 56666 589999998653211111 111 1356778888888899998876654
No 11
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=96.79 E-value=0.24 Score=51.81 Aligned_cols=321 Identities=13% Similarity=0.082 Sum_probs=172.5
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CceEEe
Q 013679 27 SIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETSVEN 105 (438)
Q Consensus 27 ~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~~~~~ 105 (438)
+-.+..+.+.+.++++.|+=..-.++..-+. +.+....-+..+++.++.|.+.-..- .-.+..
T Consensus 84 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~ 147 (501)
T 1bxs_A 84 ERGRLLNKLADLIERDRLLLATMEAMNGGKL----------------FSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM 147 (501)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHTCC----------------HHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------HHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec
Confidence 3445566666666666665554445444321 11111222455666666554422110 001122
Q ss_pred cCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch-hhhc
Q 013679 106 MKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-ILKA 182 (438)
Q Consensus 106 ~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e-Iy~v 182 (438)
.+|...-.++.|+.-|++..|- -|| ...+.-.+||-.||+.= |+=|.. .-.... .+......+|+.. ++.+
T Consensus 148 ~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~V--VlKps~-~tp~t~~~l~~l~~~aGlP~gv~~v 221 (501)
T 1bxs_A 148 DGNFFTYTRSEPVGVCGQIIPW---NFPLLMFLWKIGPALSCGNTV--VVKPAE-QTPLTALHMGSLIKEAGFPPGVVNI 221 (501)
T ss_dssp SSSEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCEE--EEECCT-TCCHHHHHHHHHHHHHTCCTTSEEE
T ss_pred cCCcceeEEecCCceEEEECCC---cchHHHHHHHHHHHHHcCCee--eccCCC-ccHHHHHHHHHHHHHhCCCcceEEE
Confidence 3466667789999999999995 467 44556789999999963 344432 111111 2223455666542 2222
Q ss_pred --c-hHHHHHHHhhcCCCCCCceEEecCCcHH------HHHH-HHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHH
Q 013679 183 --G-GAQAISAMAWGTESCPKVEKIFGPGNQY------VTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAA 252 (438)
Q Consensus 183 --G-GAQAIAAlAyGTetIp~VDkIvGPGN~y------V~~A-K~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAa 252 (438)
| |.+.-.+|. .-|+||+|.==|..- -++| +.+. .|-.. +-|-+= +|-|++||.+..|-
T Consensus 222 v~g~~~~~g~~L~----~~~~v~~I~FTGS~~~G~~i~~~aa~~~l~-----~v~lE-LGGk~p--~iV~~dADl~~Aa~ 289 (501)
T 1bxs_A 222 VPGYGPTAGAAIS----SHMDVDKVAFTGSTEVGKLIKEAAGKSNLK-----RVSLE-LGGKSP--CIVFADADLDNAVE 289 (501)
T ss_dssp CCSCTTTHHHHHH----TCTTCSEEEEESCHHHHHHHHHHHHHTTCC-----EEEEE-CCCCCE--EEECTTSCHHHHHH
T ss_pred EecCchHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHhhhccCC-----cEEEe-cCCcCe--EEECCCCCHHHHHH
Confidence 4 555445554 258899997333322 2333 1111 01111 124443 44456689988777
Q ss_pred hhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhhc----
Q 013679 253 DLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKALG---- 302 (438)
Q Consensus 253 DLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl~---- 302 (438)
.++.-+=. --.+...++.. ++.. ++..+.+.+.++.+. . ...++.+.+
T Consensus 290 ~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~ 367 (501)
T 1bxs_A 290 FAHQGVFYHQGQCCIAASRLFVE-ESIY-DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAK 367 (501)
T ss_dssp HHHHHHHTTTTCCTTCCCEEEEE-HHHH-HHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhcCCCCCCCCCEEEEc-hhHH-HHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCE
Confidence 76642211 12233333332 2343 777777776665542 0 011222210
Q ss_pred ----------------------------------CC---eEEEeCCHHHHHHHhhhhcc-ccceecccChH---HHHhhc
Q 013679 303 ----------------------------------HS---FMVFARDMLEGISFSNLYAP-EHLIVNVKDAE---KWESII 341 (438)
Q Consensus 303 ----------------------------------~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~p~---~~l~~i 341 (438)
.| .++.++|+|||++++|..-- --..|.++|.. .++.++
T Consensus 368 ~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l 447 (501)
T 1bxs_A 368 LECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSAL 447 (501)
T ss_dssp ECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHS
T ss_pred EEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhc
Confidence 01 23447899999999998532 22567788865 466666
Q ss_pred ccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEEE
Q 013679 342 ENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 342 ~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
.+|.|++..++.. + .-+|- +|..|+.|..+++.|+..-++..
T Consensus 448 -~aG~V~iN~~~~~-------~--~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~ 494 (501)
T 1bxs_A 448 -QSGTVWVNCYSVV-------S--AQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTI 494 (501)
T ss_dssp -CCSEEEESCCCCC-------C--TTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred -CeeEEEECCCCCC-------C--CCCCCCCcCcCCcCccchHHHHHHhhCeeEEEE
Confidence 4899999976431 1 12454 45667777778889988877653
No 12
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=96.72 E-value=0.7 Score=47.79 Aligned_cols=320 Identities=19% Similarity=0.151 Sum_probs=176.3
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CceEE-
Q 013679 27 SIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETSVE- 104 (438)
Q Consensus 27 ~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~~~~- 104 (438)
+-.+..+.+.+.++++.|+=..-.++..-+. ..+.+.-+..+++.++.|....... .....
T Consensus 70 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~-----------------~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~ 132 (481)
T 3jz4_A 70 ERATILRNWFNLMMEHQDDLARLMTLEQGKP-----------------LAEAKGEISYAASFIEWFAEEGKRIYGDTIPG 132 (481)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHGGGCCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 3344455555666666655444444444321 1122334667777887665432221 11111
Q ss_pred ecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch-hhhc
Q 013679 105 NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-ILKA 182 (438)
Q Consensus 105 ~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e-Iy~v 182 (438)
..+|...-.++.|+.-|++..|- .+|+ ...+.-.+||-.||+.=|+ -|.... .... .+......+|+.+ ++.+
T Consensus 133 ~~~~~~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~VVl--Kps~~t-p~~~~~l~~l~~~aGlP~gvv~v 207 (481)
T 3jz4_A 133 HQADKRLIVIKQPIGVTAAITPW-NFPA-AMITRKAGPALAAGCTMVL--KPASQT-PFSALALAELAIRAGVPAGVFNV 207 (481)
T ss_dssp SSTTEEEEEEEEECCEEEEECCS-SSTT-HHHHHHHHHHHHHTCEEEE--ECCTTS-CHHHHHHHHHHHHHTCCTTTEEE
T ss_pred cCCCceEEEEEcCccEEEEECCC-cchH-HHHHHHHHHHHHcCCEEEE--ECCCCC-cHHHHHHHHHHHHhCcCCCeEEE
Confidence 13466677888999999999995 3333 3445567899999975443 343211 1111 2223456667643 3332
Q ss_pred --c-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHh
Q 013679 183 --G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAAD 253 (438)
Q Consensus 183 --G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaD 253 (438)
| |...-.+|.- -|+||+|.==|..=| ++|+.+. .|-. -+-|-+= +|-|++||.+..|-.
T Consensus 208 v~g~~~~~g~~L~~----~p~v~~I~fTGS~~~g~~i~~~aa~~~~-----~v~l-ElGGk~p--~iV~~dADl~~Aa~~ 275 (481)
T 3jz4_A 208 VTGSAGAVGNELTS----NPLVRKLSFTGSTEIGRQLMEQCAKDIK-----KVSL-ELGGNAP--FIVFDDADLDKAVEG 275 (481)
T ss_dssp CCBCTHHHHHHHHH----CTTEEEEEEESCHHHHHHHHHHHTTTTC-----EEEE-ECCCCEE--EEECTTSCHHHHHHH
T ss_pred EeCCChHHHHHHHh----CCCcCEEEEECCHHHHHHHHHHHhhcCC-----ceEE-ecCCCCe--EEEcCCCCHHHHHHH
Confidence 3 5555555542 588999976665432 2221110 0111 1124333 444667999887766
Q ss_pred hhhccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHHHhhcC----
Q 013679 254 LLSQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKALGH---- 303 (438)
Q Consensus 254 LLaQAE----Hd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~~sl~~---- 303 (438)
++.-+= .--.+...++.. ++.. +++.+.+.+.++.+. . .+.++.+.+.
T Consensus 276 i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v 353 (481)
T 3jz4_A 276 ALASKFRNAGQTCVCANRLYVQ-DGVY-DRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARV 353 (481)
T ss_dssp HHHHHHGGGGCSTTSEEEEEEE-GGGH-HHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHhCCCcccCCcEEEEe-HHHH-HHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEE
Confidence 654221 122344444443 3353 777777777777661 0 1122222111
Q ss_pred ----------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhcc
Q 013679 304 ----------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIE 342 (438)
Q Consensus 304 ----------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~ 342 (438)
| .|+.++|+|||++++|..--=| ..|.++|.. .+..+++
T Consensus 354 ~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~ 433 (481)
T 3jz4_A 354 VCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALE 433 (481)
T ss_dssp EECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCC
T ss_pred EeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCC
Confidence 1 2345789999999999854333 557787865 4666664
Q ss_pred cccccccCCCCcccccccccCCCCCCCCCC-----ccccccCcccccccceeeEE
Q 013679 343 NAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 343 nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~~s~~ 392 (438)
+|.|++..++. .++-+|-+| ..|..+..+++.|.+.-++.
T Consensus 434 -~G~v~iN~~~~---------~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~ 478 (481)
T 3jz4_A 434 -YGIVGINTGII---------SNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMC 478 (481)
T ss_dssp -CSEEEESCSCC---------CCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred -eeeEEECCCCC---------CCCCCCcCCcccCcCCCCchHHHHHHhhceeEEE
Confidence 99999997543 134466655 45666777788888766653
No 13
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=96.67 E-value=0.53 Score=49.43 Aligned_cols=318 Identities=14% Similarity=0.101 Sum_probs=174.9
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-----CC
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-----AE 100 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~-----~~ 100 (438)
.+-.+..+.+-+.++++.|+=..-.++...+...+. -+..+++.++.|.+...+ ..
T Consensus 74 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-------------------ev~~~~~~~~~~a~~~~~~~~~~~g 134 (517)
T 3r31_A 74 MARGRILKRAADIMRERNDALSTLETLDTGKPIQET-------------------IVADPTSGADAFEFFGGIAPSALNG 134 (517)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-------------------HHHSHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-------------------HHHHHHHHHHHHHHHhhhccccccC
Confidence 344455666666666666665555555444321010 133344444444332111 12
Q ss_pred ceEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCch
Q 013679 101 TSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH 178 (438)
Q Consensus 101 ~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~e 178 (438)
......+|. .-.++.|+.-|++..|- -|| ...+.-++||-.||+.=|+ =|.. .-..... +......+|+..
T Consensus 135 ~~~~~~~~~-~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~VVl--Kps~-~tp~t~~~l~~ll~eaGlP~ 207 (517)
T 3r31_A 135 DYIPLGGDF-AYTKRVPLGVCVGIGAW---NYPQQIACWKAAPALVAGNAMVF--KPSE-NTPLGALKIAEILIEAGLPK 207 (517)
T ss_dssp CEEECSSSE-EEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEEE--ECCT-TSCSHHHHHHHHHHHTTCCT
T ss_pred cccccCCCc-ceEEEcCccEEEEECCC---cchHHHHHHHHHHHHHcCCEEEE--EcCc-ccHHHHHHHHHHHHHhCcCc
Confidence 222334566 77889999999999994 456 3445567899999975444 3432 1112222 333556677642
Q ss_pred -hhh--cchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 179 -ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 179 -Iy~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
++. .||...-.+|. .-|.||+|.==|..=| ++|+.+-- |-.. +-|-+= +|-|++||.+.
T Consensus 208 gvv~vv~g~~~~g~~L~----~~p~vd~I~FTGS~~~G~~i~~~aa~~lk~-----v~lE-lGGk~p--~IV~~dADl~~ 275 (517)
T 3r31_A 208 GLFNVIQGDRDTGPLLV----NHPDVAKVSLTGSVPTGRKVAAAAAGHLKH-----VTME-LGGKSP--MIVFDDADIES 275 (517)
T ss_dssp TSEEECCCCTTHHHHHH----TCTTEEEEEEESCHHHHHHHHHHHHHTTCE-----EEEE-CCCCEE--EEECTTSCHHH
T ss_pred ccEEEEECCHHHHHHHH----hCCCcCEEeccCCHHHHHHHHHHhhcCCCc-----EEEE-cCCcCe--EEEecCCCHHH
Confidence 332 25655555665 2588999976664322 22322210 1111 123333 44466799998
Q ss_pred HHHhhhhccCcCC----CCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhh--
Q 013679 250 IAADLLSQAEHGP----DSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKAL-- 301 (438)
Q Consensus 250 vAaDLLaQAEHd~----~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl-- 301 (438)
.|..++.-+=... .|...++... +.. +++.+.+.+.++.+.- .+.++.+.
T Consensus 276 Aa~~i~~~~f~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~ 353 (517)
T 3r31_A 276 AVGGAMLGNFYSSGQVCSNGTRVFVQK-KAK-ARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAE 353 (517)
T ss_dssp HHHHHHHHHTSCCHHHHTTCEEEEEEG-GGH-HHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCceeccCceEEEeH-HHH-HHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhC
Confidence 8877765433322 2333333322 243 6666666555544320 01111111
Q ss_pred -------------------------------------c--CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---
Q 013679 302 -------------------------------------G--HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE--- 335 (438)
Q Consensus 302 -------------------------------------~--~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~--- 335 (438)
+ .| .|+.++|+|||++++|..--=| ..|.++|..
T Consensus 354 Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~ 433 (517)
T 3r31_A 354 GATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAH 433 (517)
T ss_dssp TCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHH
T ss_pred CCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHH
Confidence 1 12 2455789999999999853222 567788864
Q ss_pred HHHhhcccccccccCCCCcccccccccCCCCCCC-----CCCccccccCcccccccceeeEEE
Q 013679 336 KWESIIENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 336 ~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
.++.++ .+|.|++..++.. +.-+| -+|..|+.|..+++.|+..-++..
T Consensus 434 ~~~~~l-~aG~V~iN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~ 486 (517)
T 3r31_A 434 RVVDGL-EAGTLWINTYNLC---------PVEIPFGGSKQSGFGRENSAAALEHYSELKTVYV 486 (517)
T ss_dssp HHHHHS-CCSEEEESSCCCC---------CTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEE
T ss_pred HHHHHC-CcceEEECCCCCC---------CCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEE
Confidence 567777 5999999985421 22344 456778889999999998877653
No 14
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=96.66 E-value=0.23 Score=51.73 Aligned_cols=322 Identities=17% Similarity=0.140 Sum_probs=180.3
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS 102 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~ 102 (438)
....+-.+..+.+-+.++++.|+=..-.++..-+...+ +..|+ ....+.|+..+++++++...+.+
T Consensus 45 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e----a~~ev------~~~~~~~~~~a~~~~~~~~~~~~---- 110 (484)
T 3ros_A 45 EEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE----SKEEV------ELCVSICNYYADHGPEMLKPTKL---- 110 (484)
T ss_dssp SCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH----HHHHH------HHHHHHHHHHHHHHHHHTSCEEE----
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH----HHHHH------HHHHHHHHHHHHHHHHhcCCeec----
Confidence 34445566677777777888777666666655532100 00010 02233344444444444322221
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHcCCc
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVT 177 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~Gv~ 177 (438)
..+|...-.++.|+.-|++..|- -|| ...+.-.+||-.||+.=|+= |.. ..|. +......+|+.
T Consensus 111 --~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~VVlK--ps~----~tp~t~~~l~~l~~~aGlP 179 (484)
T 3ros_A 111 --NSDLGNAYYLKQSTGVIMACEPW---NFPLYQVIRVFAPNFIVGNPILLK--HAH----NVPGSAALTAKIIKRAGAP 179 (484)
T ss_dssp --CCTTSEEEEEEECCCEEEEECCS---SSTTHHHHHHHHHHHHHTCCEEEE--CCT----TCHHHHHHHHHHHHHHTCC
T ss_pred --cCCCceeEEEecCCceEEEECCC---chHHHHHHHHHHHHHHcCCEEEEE--CCC----CChHHHHHHHHHHHHhCcC
Confidence 12455677889999999999995 355 34445678999999865543 431 3342 22345566664
Q ss_pred h-hhh--cchHHHHHHHhhcCCCCCCceEEecCCcHH------HHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHH
Q 013679 178 H-ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQY------VTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPV 248 (438)
Q Consensus 178 e-Iy~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~y------V~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~ 248 (438)
+ ++. .|+...++.|. .-|+||+|.==|..= -++|+.+- .|-.. +-|-+= +|-|++||.+
T Consensus 180 ~gvv~vv~g~~~~~~~L~----~~p~vd~I~fTGS~~~G~~i~~~aa~~lk-----~v~lE-LGGk~p--~iV~~dADl~ 247 (484)
T 3ros_A 180 EGSLINLYPSYDQLADII----ADPRIQGVALTGSERGGSAVAEAAGKNLK-----KSTME-LGGNDA--FIVLDDADPQ 247 (484)
T ss_dssp TTSEEEECCCHHHHHHHH----TSTTEEEEEEESCHHHHHHHHHHHHHTTC-----EEEEE-CCCCCE--EEECTTCCHH
T ss_pred cCeEEEEeCChHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHHhccCC-----ceEee-cCCCCc--ceeCCCCCHH
Confidence 2 222 24344444454 258899997555432 23332221 01111 124443 4446679999
Q ss_pred HHHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------------C-HHHHHHhhc
Q 013679 249 HIAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------------R-GEFASKALG 302 (438)
Q Consensus 249 ~vAaDLLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------------r-~~ia~~sl~ 302 (438)
..|-.++.-+=.. -.|...++.. ++.. +++.+.+.+.++.+. | .+.++.+.+
T Consensus 248 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~ 325 (484)
T 3ros_A 248 VLRNVLNDARTYNDGQVCTSSKRIIVE-KSRY-DEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAID 325 (484)
T ss_dssp HHHHHHTTTTTGGGGCCTTSCCEEEEE-GGGH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCccCCceEEEc-HHHH-HHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHH
Confidence 8887776533222 2233333333 2353 777777777666542 0 112222211
Q ss_pred C--------------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HH
Q 013679 303 H--------------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KW 337 (438)
Q Consensus 303 ~--------------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~ 337 (438)
. | .|+.++|+|||++++|..--=| ..|.++|.. .+
T Consensus 326 ~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~ 405 (484)
T 3ros_A 326 AGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKV 405 (484)
T ss_dssp TTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHH
T ss_pred cCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHH
Confidence 1 2 2345789999999999864322 567788864 46
Q ss_pred HhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEEE
Q 013679 338 ESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 338 l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
..++ .+|.|++..++. .+.-+|-+ |..|..|..+++.|+..-++..
T Consensus 406 ~~~l-~aG~V~vN~~~~---------~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~ 456 (484)
T 3ros_A 406 SAQI-ETGMTVINGRWI---------TSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVID 456 (484)
T ss_dssp HHHS-CSSCCEETSCCC---------CCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEE
T ss_pred HHhC-ccceEEECCCCC---------CCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEE
Confidence 6666 589999997432 12334544 5678888889999998877654
No 15
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=96.63 E-value=0.61 Score=48.17 Aligned_cols=287 Identities=15% Similarity=0.154 Sum_probs=153.9
Q ss_pred HHHHHHHHHHHHHh--cc-CCCceEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCC
Q 013679 82 FDVAYNNIYAFHLA--QK-SAETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPP 157 (438)
Q Consensus 82 i~~A~~nI~~fh~~--q~-~~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP 157 (438)
+..+++.++.|... ++ .........++....+++.|+.-||+..|= -|| ...+...+||-.||+.=|+=.+|-
T Consensus 88 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw---NfP~~~~~~~~~~ALaaGN~VVlKps~~ 164 (474)
T 4h7n_A 88 IDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPW---NFPLTLSMIDTIPALLAGCAVVVKPSEI 164 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECS---SSHHHHHHTTHHHHHHHTCEEEEEECTT
T ss_pred HHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCC---CcHHHHHhcccCcchhcCCceeeccccc
Confidence 55566666666432 11 222222335677788889999999999884 477 445556789999998655443332
Q ss_pred CCCCCCCHHHHHHHHHcCCc-hhhh--cchHHHHHHHhhcCCCCCCceEEecCCcHH------HHHHHHHhcCCCCcccc
Q 013679 158 SQDGSICKEVLYCAKKAGVT-HILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQY------VTAAKMILQNSEAMISI 228 (438)
Q Consensus 158 ~~~G~i~p~iL~AA~l~Gv~-eIy~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~y------V~~AK~~v~~~~~~VgI 228 (438)
.+ ...-.++.++..+|.- .++. -||.....+|. +.||+|.==|..- -.+|+++.- |-.
T Consensus 165 tp--~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~------~~v~~v~FTGS~~~G~~i~~~aa~~~~~-----v~l 231 (474)
T 4h7n_A 165 AP--RFVAPLLMALNTVPELRDVLIFVEGGGETGANLI------NYVDFVCFTGSVATGREVAETAARRFIP-----AYL 231 (474)
T ss_dssp SC--TTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHH------TTCSEEEEESCHHHHHHHHHHHHHHTCC-----EEE
T ss_pred Cc--hHHHHHHhhhhhhcccccceeeccccchhhhhhh------hccceEEeccccchhhhhhhhhhccccc-----ccc
Confidence 11 1112233344445431 2322 36666666664 4588886445432 233444320 111
Q ss_pred cCCCCCceEEEEecCCCCHHHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C-------
Q 013679 229 DMPAGPSEVLVIADIYASPVHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------- 293 (438)
Q Consensus 229 D~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------- 293 (438)
. +-|=+ -+|-+++||.+..|..++.-+=. --.+...++... +.. ++..+.+.+.+..+. .
T Consensus 232 E-lGGk~--p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~g 306 (474)
T 4h7n_A 232 E-LGGKD--PAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAE-SKF-EEFYHQLIAKAHRLQLAYPLVEDGAIG 306 (474)
T ss_dssp E-CCCCE--EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEG-GGH-HHHHHHHHHHHHHCCBCCSSGGGCSBC
T ss_pred c-CCCcC--ccccCchhhHHHHHHHHHhhhccCCCCceeecccccchH-HHH-HHHHHHHHHHhhccccCCCcccccccC
Confidence 1 12222 24456779999888776542211 122333333332 232 444444443333221 0
Q ss_pred -------H----HHHHHhhc---------------------------------------CC---eEEEeCCHHHHHHHhh
Q 013679 294 -------G----EFASKALG---------------------------------------HS---FMVFARDMLEGISFSN 320 (438)
Q Consensus 294 -------~----~ia~~sl~---------------------------------------~g---~ii~v~~l~ea~~~~N 320 (438)
. +.+..+.+ .| .|+.++|+|||++++|
T Consensus 307 pli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN 386 (474)
T 4h7n_A 307 PIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLAN 386 (474)
T ss_dssp CCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHH
Confidence 0 11112211 11 3566899999999999
Q ss_pred hhc-cccceecccChHH---HHhhcccccccccCCCCcccccccccCCCCCCCCCCcc-ccccCcccccccceeeEE
Q 013679 321 LYA-PEHLIVNVKDAEK---WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYGYA-RMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 321 ~~A-PEHLel~~~~p~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G~A-R~~sgLsv~~FlK~~s~~ 392 (438)
.-- +=-..|.++|... +..+++ +|.|++..++...+ --.||--=.|.+|.. |..|.-+++.|++.-++.
T Consensus 387 ~~~~GL~a~v~t~d~~~a~~~a~~l~-aG~v~iN~~~~~~~--~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~ 460 (474)
T 4h7n_A 387 DTIYGLSAAVFAGSEDEALKVARQLN-AGAISINDAALTAM--MHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFL 460 (474)
T ss_dssp CSSCCSEEEEECSSHHHHHHHHTTSC-CSEEEESSSCGGGT--CCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEE
T ss_pred cCCCCCeEEEEeCCHHHHHHHHHhCC-eeEEEECCCCccCC--cCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEE
Confidence 742 2235677888754 555664 89999997543211 012333334455554 667777899999887764
No 16
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=96.62 E-value=0.63 Score=48.44 Aligned_cols=280 Identities=19% Similarity=0.139 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHHHHhccCCCce-EEe-cCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCC
Q 013679 81 AFDVAYNNIYAFHLAQKSAETS-VEN-MKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPP 157 (438)
Q Consensus 81 ai~~A~~nI~~fh~~q~~~~~~-~~~-~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP 157 (438)
-+..+++.++.|.+.-..-... ... .+|...-.++.|+.-|++..|- -|| ...+.-.+||-.||+.=|+ -|.
T Consensus 110 ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVl--Kps 184 (497)
T 3k2w_A 110 EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAW---NFPLALAGRKIGPALITGNTMVL--KPT 184 (497)
T ss_dssp HHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEEE--ECC
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCC---ccHHHHHHHHHHHHHHcCCEEEE--ECC
Confidence 4667777787775532221111 111 3566777889999999999995 577 4555778899999975444 343
Q ss_pred CCCCCCCH-HHHHHHHHcCCch-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------HH---HHHhcCCC
Q 013679 158 SQDGSICK-EVLYCAKKAGVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AA---KMILQNSE 223 (438)
Q Consensus 158 ~~~G~i~p-~iL~AA~l~Gv~e-Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~A---K~~v~~~~ 223 (438)
. .-.... .+......+|+.. ++. -| |...-.+|. .-|.||+|.==|..=|- +| |+++.
T Consensus 185 ~-~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~----~~p~vd~I~fTGS~~~G~~i~~~aa~~l~pv~l--- 256 (497)
T 3k2w_A 185 Q-ETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLC----ESPITKMITMTGSTVAGKQIYKTSAEYMTPVML--- 256 (497)
T ss_dssp S-SSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHH----HCSSEEEEEEESCHHHHHHHHHHHTTTTCCEEE---
T ss_pred C-CChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHH----hCCCcCEEEEECcHHHHHHHHHHhhhcCCCeEE---
Confidence 2 111111 2223455666542 221 13 444444554 25889999766654321 12 22211
Q ss_pred CcccccCCCCCceEEEEecCCCCHHHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCCC------
Q 013679 224 AMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR------ 293 (438)
Q Consensus 224 ~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r------ 293 (438)
. +-|-+= +|-|++||.+..|-.++.-+=. --.|...++... +.. +++.+.+.+.++.+.-
T Consensus 257 -----E-lGGk~p--~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~vg~p~~~ 326 (497)
T 3k2w_A 257 -----E-LGGKAP--MVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHA-SVY-DEFMAKFLPLVKGLKVGDPMDA 326 (497)
T ss_dssp -----E-CCCCEE--EEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEET-TTH-HHHHHHHHHHHHTCCBSCTTST
T ss_pred -----E-cCCCCc--eEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeH-HHH-HHHHHHHHHHHHhccCCCCCCC
Confidence 1 123333 4456679999877776532211 123444444433 243 6777666666655520
Q ss_pred ----------------HHHHHHh---------------------------------------h--c-CC---eEEEeCCH
Q 013679 294 ----------------GEFASKA---------------------------------------L--G-HS---FMVFARDM 312 (438)
Q Consensus 294 ----------------~~ia~~s---------------------------------------l--~-~g---~ii~v~~l 312 (438)
.+.++.+ + + .| .|+.++|+
T Consensus 327 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 406 (497)
T 3k2w_A 327 DSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSM 406 (497)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCH
T ss_pred CCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCH
Confidence 0111111 1 1 13 34568999
Q ss_pred HHHHHHhhhhcccc-ceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccc
Q 013679 313 LEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLD 383 (438)
Q Consensus 313 ~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~ 383 (438)
|||++++|..--=| ..|.++|.. .++.++ .+|.|++..++.. ++-+|-+ |..|..|..+++
T Consensus 407 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~v~vN~~~~~---------~~~~PfGG~k~SG~G~~~G~~gl~ 476 (497)
T 3k2w_A 407 EQAIEFCNDSIYGLSAYVHTQSFANINQAISDL-EVGEVYINRGMGE---------QHQGFHNGWKQSGFGGEDGKFGLE 476 (497)
T ss_dssp HHHHHHHTCSSEESEEEEECSBHHHHHHHHHHC-CSSEEEESCCSCC---------CTTSCBCCEETSEESCBSHHHHHH
T ss_pred HHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhC-CeeEEEEcCCCCC---------CCCCCcCCcCCCcCCccchHHHHH
Confidence 99999999864433 567787864 566676 4999999976432 1345544 567777778889
Q ss_pred cccceeeEEE
Q 013679 384 SFLKYMTVQS 393 (438)
Q Consensus 384 ~FlK~~s~~~ 393 (438)
.|+..-++..
T Consensus 477 ~ft~~k~v~~ 486 (497)
T 3k2w_A 477 QYLEKKTVYI 486 (497)
T ss_dssp TTEEEEEEEE
T ss_pred HhcceEEEEE
Confidence 9987776544
No 17
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=96.45 E-value=0.78 Score=48.07 Aligned_cols=334 Identities=15% Similarity=0.171 Sum_probs=171.7
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce-
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS- 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~- 102 (438)
...+-.+..+.+-+.++++.|+=..-.++..-+.. .+.+.-+..+++.++.|.+.-....|.
T Consensus 83 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~~a~~ev~~~~~~l~~~a~~~~~~~~~~ 145 (528)
T 3v4c_A 83 SRKERAAFLRAIADEIEARAEAITEIGSQETGLPE-----------------ARLNGERGRTTGQLRLFADHIEKGDYLD 145 (528)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHCGGGC
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 34444555666666677776665544444443210 111122445555555554322111111
Q ss_pred --EE-------ecCceEEEEEEEecceeeEeecCCCCCCchHhh---hhcccceecCCCeEEEecCCCCCCCCCHHH---
Q 013679 103 --VE-------NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTAL---MLSVPAQIAGCKTVVLATPPSQDGSICKEV--- 167 (438)
Q Consensus 103 --~~-------~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvL---M~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i--- 167 (438)
.. ..+|...-.++.|+.-|++..|- -||-... .-++||-.||+.=| +-|.. ..|.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~a~ALaaGN~VV--lKps~----~tp~t~~~ 216 (528)
T 3v4c_A 146 RRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGAS---NFPLAFSTAGGDTAAALAAGCPVV--VKGHS----AHPGTGEI 216 (528)
T ss_dssp CEEECCBTTCSSSCBCCEEEEEEECSCEEEECCS---SSTTTTSTTSHHHHHHHHHTCCEE--EECCT----TCHHHHHH
T ss_pred cccccccccccCCCCCcceeEeeCCcEEEEECCC---cchHHHhhhhhhhHHHHhcCCEEE--EECCC----CCcHHHHH
Confidence 00 01233345788999999999884 3554432 47899999997544 33432 34432
Q ss_pred HH-----HHHHcCCch-hhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcH----HH--HHHHHHhcCCCCcccccCCC
Q 013679 168 LY-----CAKKAGVTH-ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQ----YV--TAAKMILQNSEAMISIDMPA 232 (438)
Q Consensus 168 L~-----AA~l~Gv~e-Iy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~----yV--~~AK~~v~~~~~~VgID~~A 232 (438)
|+ +...+|+.+ ++.+ | |...-.+|.= -|.||+|.==|.. .| ++|+++--. .| +=-+-
T Consensus 217 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~----~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~---pv-~lElG 288 (528)
T 3v4c_A 217 VAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQ----HPHIKAVGFTGSLAGGRALFDLCAARPEPI---PF-FGELG 288 (528)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHHHSSSCC---CE-EEECC
T ss_pred HHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHh----CCCCCEEEEECChHHHHHHHHHHhhccCCC---ce-EEecC
Confidence 22 233467643 3322 3 5554455542 4889999755543 22 223222000 00 00122
Q ss_pred CCceEEEEecCCC---CHHHHHHhhhhc----cCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC------------
Q 013679 233 GPSEVLVIADIYA---SPVHIAADLLSQ----AEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR------------ 293 (438)
Q Consensus 233 GPSEvlIiAD~~A---np~~vAaDLLaQ----AEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r------------ 293 (438)
|-+=++| |++| |.+.+|..++.- +=.--.|...++....... +++.+.+.+.++.+.-
T Consensus 289 Gk~p~iV--~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~-d~f~~~l~~~~~~~~~~~~~gp~~~~~~ 365 (528)
T 3v4c_A 289 SVNPMFL--LPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA-DRFTTAAVEALAKVAPQTMLTDGIAKAY 365 (528)
T ss_dssp CCCCEEE--CHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH-HHHHHHHHHHHHTCCCEECSCHHHHHHH
T ss_pred CCCeEEE--CCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH-HHHHHHHHHHHHhcccCCCCCHHHHHHH
Confidence 4343444 4456 444444444321 1112234444444332232 5555555555544310
Q ss_pred HHHHH------------------------------------Hhhc---CC---eEEEeCCHHHHHHHhhhhcccc-ceec
Q 013679 294 GEFAS------------------------------------KALG---HS---FMVFARDMLEGISFSNLYAPEH-LIVN 330 (438)
Q Consensus 294 ~~ia~------------------------------------~sl~---~g---~ii~v~~l~ea~~~~N~~APEH-Lel~ 330 (438)
.+.+. ..+. .| .|+.++|+|||++++|..--=| ..|.
T Consensus 366 ~~~v~~~~~~~Ga~v~~gG~~~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~ 445 (528)
T 3v4c_A 366 RDGQARFATRNAVKPLLATESSGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIH 445 (528)
T ss_dssp HHHHHHHHTCTTCEEEECCCCCTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEE
T ss_pred HHHHHHHHHhCCCEEEeCCCcCCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEE
Confidence 00000 1121 13 3455789999999999853222 5566
Q ss_pred cc--Ch---HHHHhhcc-cccccccCCCCccc-cccc--ccCCCCCCCCCCccccc--cCcccccccceeeEEEeCHH
Q 013679 331 VK--DA---EKWESIIE-NAGSVFLGEWTPES-VGDY--ASGTNHVLPTYGYARMY--GGVSLDSFLKYMTVQSLTEE 397 (438)
Q Consensus 331 ~~--~p---~~~l~~i~-nAGaiFlG~~sp~a-~GDY--~aGpNHvLPT~G~AR~~--sgLsv~~FlK~~s~~~~s~~ 397 (438)
++ |. +.+..+++ .+|.|++..++... .++. +.|| .+-+|..|+. |..+++.|++..++|.+...
T Consensus 446 t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~---~~~Sg~gr~~~~G~~gl~~~~~~k~~q~~p~~ 520 (528)
T 3v4c_A 446 MDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGP---YPASTNFGATSVGTMSIRRFLRPVAYQNMPED 520 (528)
T ss_dssp CCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCT---TTTBSCTTCCSSSGGGGGGGEEEEEEESCCGG
T ss_pred cCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCC---CCCCCCCCCCCCcHHHHHHhchhHHhhcCCcc
Confidence 77 44 45777777 79999999865522 1111 1111 2344567875 78899999999999987654
No 18
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=96.45 E-value=1.1 Score=46.57 Aligned_cols=323 Identities=13% Similarity=0.127 Sum_probs=172.5
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--ccCCCc
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLA--QKSAET 101 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~--q~~~~~ 101 (438)
...+-.+..+.+.+.++++.|+=..-.++...+.. .+.+.-+..+++.++.|... .+...+
T Consensus 63 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~~a~~ev~~~~~~~~~~a~~~~~~~g~~ 125 (486)
T 1t90_A 63 AVPRRARILFNFQQLLSQHKEELAHLITIENGKNT-----------------KEALGEVGRGIENVEFAAGAPSLMMGDS 125 (486)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCH-----------------HHHHHHHHHHHHHHHHHTTHHHHHCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 33444555666666666666655555555443210 01112245556666655321 111111
Q ss_pred eEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch-
Q 013679 102 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH- 178 (438)
Q Consensus 102 ~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e- 178 (438)
.....+|...-.++.|+.-|++..|- -|| ...+...+||-.||+.=|+= |.. .-.... .+......+|...
T Consensus 126 ~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVlK--ps~-~tp~t~~~l~~l~~~aGlP~g 199 (486)
T 1t90_A 126 LASIATDVEAANYRYPIGVVGGIAPF---NFPMMVPCWMFPMAIALGNTFILK--PSE-RTPLLTEKLVELFEKAGLPKG 199 (486)
T ss_dssp EEEEETTEEEEEEEEECSEEEEECCS---SCTTHHHHHHHHHHHHTTCEEEEE--CCS-SSCHHHHHHHHHHHHTTCCTT
T ss_pred cccCCCCceeEEEecccCEEEEECCC---chhHHHHHHHHHHHHHcCCEEEEE--CCC-CChHHHHHHHHHHHHhCCCCC
Confidence 11123566667788999999999995 355 33456778999999865443 432 111112 2233455666642
Q ss_pred hhh--cchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHH
Q 013679 179 ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 250 (438)
Q Consensus 179 Iy~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~v 250 (438)
++. -||.+.-.+|.= -|.||+|.==|..=| ++|+.+. .|-.. +-|-+= +|-|++||.+..
T Consensus 200 vv~vv~g~~~~~~~L~~----~~~v~~I~fTGS~~~g~~i~~~aa~~~~-----pv~lE-lGGk~p--~iV~~dADl~~A 267 (486)
T 1t90_A 200 VFNVVYGAHDVVNGILE----HPEIKAISFVGSKPVGEYVYKKGSENLK-----RVQSL-TGAKNH--TIVLNDANLEDT 267 (486)
T ss_dssp SEEECCCSHHHHHHHHH----CTTEEEEEEESCHHHHHHHHHHHHHTTC-----EEEEE-CCCCEE--EEECTTSCHHHH
T ss_pred EEEEEECCHHHHHHHHh----CCCCCEEEEeCCHHHHHHHHHHHhccCC-----cEEec-cCCCCc--EEECCCCCHHHH
Confidence 222 255554445542 488999984444222 2222211 01111 134432 344566898887
Q ss_pred HHhhhhcc----CcCCCCceE-EEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHh---
Q 013679 251 AADLLSQA----EHGPDSQVV-LVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKA--- 300 (438)
Q Consensus 251 AaDLLaQA----EHd~~a~~v-Lvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~s--- 300 (438)
|-.++.-+ =.--.+... ++.... . ++..+.+.+.++.+.- .+.++.+
T Consensus 268 a~~i~~~~~~n~GQ~C~a~~rvv~v~~~--~-d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 344 (486)
T 1t90_A 268 VTNIVGAAFGSAGERCMACAVVTVEEGI--A-DEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEE 344 (486)
T ss_dssp HHHHHHHHHGGGGCCTTCEEEEEEEHHH--H-HHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcccCCeeEEecCC--H-HHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhC
Confidence 76665422 112334444 444332 3 6666666666555430 0111111
Q ss_pred ---------------------------------hc---CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH---HH
Q 013679 301 ---------------------------------LG---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KW 337 (438)
Q Consensus 301 ---------------------------------l~---~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~---~~ 337 (438)
+. .| .++.++|+|||++++|..- +--..|.++|.. .+
T Consensus 345 Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~ 424 (486)
T 1t90_A 345 GARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYF 424 (486)
T ss_dssp TCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHH
T ss_pred CCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHH
Confidence 10 12 3455789999999999842 223667788874 46
Q ss_pred HhhcccccccccCCCCcccccccccCCCCCCCCCC-----cc--ccccCcccccccceeeEEE
Q 013679 338 ESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YA--RMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 338 l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~A--R~~sgLsv~~FlK~~s~~~ 393 (438)
..++ .+|.|++..++. .++.-+|-+| +. |+.|.-+++.|+..-++..
T Consensus 425 ~~~l-~aG~v~vN~~~~--------~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~ 478 (486)
T 1t90_A 425 RENI-DAGMLGINLGVP--------APMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTA 478 (486)
T ss_dssp HHHC-CCSEEEESCSCC--------CCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEE
T ss_pred HHhC-CcCeEEECCCCC--------CCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEE
Confidence 6666 699999996432 1223466555 44 6666677888988777643
No 19
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=96.40 E-value=0.28 Score=50.78 Aligned_cols=281 Identities=16% Similarity=0.135 Sum_probs=157.9
Q ss_pred HHHHHHHHHHHHHhccC-CCceEEecCceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCC
Q 013679 82 FDVAYNNIYAFHLAQKS-AETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQ 159 (438)
Q Consensus 82 i~~A~~nI~~fh~~q~~-~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~ 159 (438)
+..+.+.++.|.+.-.. ........+|...-.++.|+.-|++..|- -||-.. +.-.+||-.||+.=|+=.+|-.
T Consensus 106 v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pw---N~P~~~~~~~~~~ALaaGN~vVlKps~~t- 181 (490)
T 2ve5_A 106 IVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAW---NYPVQIALWKSAPALAAGNAMIFKPSEVT- 181 (490)
T ss_dssp HHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEEEECCTTS-
T ss_pred HHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECCC---cchHHHHHHHHHHHHHcCCEEEEECCCcc-
Confidence 45566667766543221 11112224566677889999999999985 466443 4567899999976555433211
Q ss_pred CCCCCH-HHHHHHHHcCCch-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HH-HHHHhcCCCCccc
Q 013679 160 DGSICK-EVLYCAKKAGVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TA-AKMILQNSEAMIS 227 (438)
Q Consensus 160 ~G~i~p-~iL~AA~l~Gv~e-Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~-AK~~v~~~~~~Vg 227 (438)
.... .+....+.+|+.+ ++. -| |...-.+|. .-|.||+|.==|..-| ++ |+.+-- |-
T Consensus 182 --p~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~----~~p~vd~v~fTGS~~~g~~i~~~a~a~~l~~-----v~ 250 (490)
T 2ve5_A 182 --PLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLT----EHPLIEKISFTGGTSTGKKVMASASSSSLKE-----VT 250 (490)
T ss_dssp --CHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHHHHHCCE-----EE
T ss_pred --hHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHH----hCCCcCEEEEeCCcHHHHHHHHhchhccccc-----eE
Confidence 1111 2223445566542 221 13 544444554 2588999976666533 12 222110 11
Q ss_pred ccCCCCCceEEEEecCCCCHHHHHHhhhhccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------
Q 013679 228 IDMPAGPSEVLVIADIYASPVHIAADLLSQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR---------- 293 (438)
Q Consensus 228 ID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAE----Hd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r---------- 293 (438)
.. +-|-+= +|-|++||.+..|-.++.-+= .--.+...++.. ++.. +++.+.+.+.++.+.-
T Consensus 251 lE-lGGk~p--~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~g~p~d~~~~~ 325 (490)
T 2ve5_A 251 ME-LGGKSP--LIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIH-RSQQ-ARFEAKVLERVQRIRLGDPQDENTNF 325 (490)
T ss_dssp EE-CCCCCE--EEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEE-GGGH-HHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred EE-cCCCce--eEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEc-HHHH-HHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 10 114333 455667899887776654221 122333333333 2353 7777777776665520
Q ss_pred ------------HHHHHHhhcC------------------------------------------C---eEEEeCCHHHHH
Q 013679 294 ------------GEFASKALGH------------------------------------------S---FMVFARDMLEGI 316 (438)
Q Consensus 294 ------------~~ia~~sl~~------------------------------------------g---~ii~v~~l~ea~ 316 (438)
.+.++.+.+. | .++-++|+|||+
T Consensus 326 gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~~~~deAi 405 (490)
T 2ve5_A 326 GPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAI 405 (490)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEeCCHHHHH
Confidence 1222322211 2 245579999999
Q ss_pred HHhhhhcccc-ceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccc
Q 013679 317 SFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLK 387 (438)
Q Consensus 317 ~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK 387 (438)
+++|..--=| ..|.++|.. .+..++ .+|.|++..+... ++-+|-+ |..|..|..+++.|++
T Consensus 406 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~v~vN~~~~~---------~~~~pfGG~k~SG~G~~~G~~~~~~f~~ 475 (490)
T 2ve5_A 406 RRANDTEYGLAAGVVTQDLARAHRAIHRL-EAGICWINTWGES---------PAEMPVGGYKQSGVGRENGLTTLAHYTR 475 (490)
T ss_dssp HHHHCSSCCSEEEEECSBHHHHHHHHHHS-CCSEEEESCCSCC---------CTTSCBCCSGGGEESCBSHHHHHHTTEE
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhC-CcceEEECCCCCC---------CCCCCcCCCCCCCCCCcchHHHHHHhhe
Confidence 9999964323 667788865 466666 4999999975421 2345655 4667777778889988
Q ss_pred eeeEE
Q 013679 388 YMTVQ 392 (438)
Q Consensus 388 ~~s~~ 392 (438)
.-++.
T Consensus 476 ~k~v~ 480 (490)
T 2ve5_A 476 IKSVQ 480 (490)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 77754
No 20
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=96.37 E-value=1.3 Score=46.65 Aligned_cols=322 Identities=16% Similarity=0.163 Sum_probs=178.2
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CceE
Q 013679 25 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETSV 103 (438)
Q Consensus 25 ~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~~~ 103 (438)
..+-.+..+.+.+.++++.|+=..-.++..-+. +. +.+.-+..+++.++.|.+.-..- ....
T Consensus 84 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~-ea~~ev~~~~~~l~~~a~~~~~~~~~~~ 146 (528)
T 3u4j_A 84 GAERSRLMFKVADLILARQEELALIESLEVGKP----------------IA-QARGEIGFCADLWSYAAGQARALEGQTH 146 (528)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HH-HHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------HH-HHHHHHHHHHHHHHHHHHHHHHhcCeee
Confidence 344455566667777777766555555544421 11 11233566666777665432211 1111
Q ss_pred Eec-CceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hh
Q 013679 104 ENM-KGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HI 179 (438)
Q Consensus 104 ~~~-~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eI 179 (438)
... +|...-.++.|+.-|++..|-- ||- ..+.-.+||-.||+.=|+ -|.. .-..... +......+|+. .+
T Consensus 147 ~~~~~~~~~~~~~~P~GVV~~I~PwN---~P~~~~~~~~a~ALaaGN~VVl--Kps~-~tp~t~~~l~~l~~eaGlP~gv 220 (528)
T 3u4j_A 147 NNIGDDRLGLVLREPVGVVGIITPWN---FPFIIASERVPWAIGSGCTVVL--KPSE-FTSGTSIRLAELAREAGIPDGV 220 (528)
T ss_dssp CCSCTTEEEEEEEEECCEEEEECCSS---SHHHHHHHHHHHHHHTTCEEEE--ECCT-TCCHHHHHHHHHHHHHTCCTTS
T ss_pred ccCCCCceeEEEeccceEEEEECCCc---cHHHHHHHHHHHHHHcCCeEEE--EcCC-ccHHHHHHHHHHHHHhCCCCCe
Confidence 112 5677778899999999999953 563 445567899999975444 3432 1111112 22345566654 23
Q ss_pred hhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHH
Q 013679 180 LKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 250 (438)
Q Consensus 180 y~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~v 250 (438)
+.+ | |...-.+|.- -|.||+|.==|..=| ++|+.+- .|-..+ -|-+= +|-|++||.+..
T Consensus 221 v~vv~g~~~~~g~~L~~----~p~vd~I~FTGS~~~G~~i~~~aa~~lk-----~v~lEL-GGk~p--~iV~~dADl~~A 288 (528)
T 3u4j_A 221 FNVVTGYGDPAGQVLAE----DPNVDMVAFTGSVRVGTKLGEIAARTVK-----RVGLEL-GGKGP--QIVFADADLDAA 288 (528)
T ss_dssp EEECCCSSTTHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHHTTTC-----EEEEEC-CCCEE--EEECTTSCHHHH
T ss_pred EEEEeCCcHHHHHHHHh----CCCcCEEEEeCCHHHHHHHHHHHHhcCC-----ceEEec-CCCCe--eEECCCCCHHHH
Confidence 322 3 5554455542 588999975554322 2222111 122222 24443 444667899988
Q ss_pred HHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHhhcC-
Q 013679 251 AADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKALGH- 303 (438)
Q Consensus 251 AaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~sl~~- 303 (438)
|..++.-+=. --.+...|+.. ++.. +++.+.+.+.++.+. . .+.++.+.+.
T Consensus 289 a~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G 366 (528)
T 3u4j_A 289 ADGIAYGVYHNAGQCCISGSRLLVQ-EGIR-DALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSG 366 (528)
T ss_dssp HHHHHHHHHGGGGCCTTCEEEEEEE-GGGH-HHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhcCCCCCcCCCEEEEe-chHH-HHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCC
Confidence 7776642221 22333444443 3343 666666666555441 0 0122222111
Q ss_pred --------------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHH
Q 013679 304 --------------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWE 338 (438)
Q Consensus 304 --------------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l 338 (438)
| .|+.++|+|||++++|..--=| ..|.++|.. .++
T Consensus 367 a~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~ 446 (528)
T 3u4j_A 367 AELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTI 446 (528)
T ss_dssp CEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHH
T ss_pred CEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHH
Confidence 2 2455789999999999863222 556777764 567
Q ss_pred hhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEEE
Q 013679 339 SIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 339 ~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
.++ .+|.|++..++.. +.-+|-+ |..|+.|..+++.|+..-++..
T Consensus 447 ~~l-~aG~V~vN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~ 496 (528)
T 3u4j_A 447 RRI-RAGRCWINSVIDG---------TPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHV 496 (528)
T ss_dssp HHS-CCSEEEESCCSCC---------CTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEE
T ss_pred HhC-CeeEEEECCCCCC---------CCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEE
Confidence 777 5999999986421 2345655 4678888888999988777553
No 21
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=96.34 E-value=1.3 Score=46.33 Aligned_cols=324 Identities=17% Similarity=0.123 Sum_probs=180.4
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-Cce
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETS 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~~ 102 (438)
...+-.+..+.+.+.++++.|+=..-.++..-+.. .+.+.-+..+++.++.|.+.-..- ...
T Consensus 69 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~ea~~Ev~~~~~~~~~~a~~~~~~~g~~ 131 (505)
T 3prl_A 69 PIHERVDLLYAWADLLEERKEIIGELIMHEVAKPK-----------------KSAIGEVSRTADIIRHTADEALRLNGET 131 (505)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCH-----------------HHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 34445566677777777777766555565555321 111223455555666554322110 111
Q ss_pred EEec--C----ceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHH
Q 013679 103 VENM--K----GVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCA 171 (438)
Q Consensus 103 ~~~~--~----Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA 171 (438)
.... + |...-.++.|+.-|++..|- -||- ..+.-.+||-.||+.=|+= |.. ..|. +..+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~VVlK--pse----~tp~ta~~l~~ll 202 (505)
T 3prl_A 132 LKGDQFKGGSSKKIALVEREPLGVVLAISPF---NYPVNLAAAKIAPALVTGNTVVFK--PAT----QGSLSGIKMVEAL 202 (505)
T ss_dssp EEGGGSTTTCSSEEEEEEEEECSEEEEEECS---SSTTHHHHHHHHHHHHTTCEEEEE--ECS----TTHHHHHHHHHHH
T ss_pred ccccccccccCCceeEEEEcCCcEEEEECCC---ccHHHHHHHHHHHHHHcCCEEEEE--CCC----CChHHHHHHHHHH
Confidence 1111 2 44556778999999999994 3443 3345678999999764443 431 3443 22345
Q ss_pred HHcCCch-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCC-CcccccCCCCCceEEEEecCCCC
Q 013679 172 KKAGVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSE-AMISIDMPAGPSEVLVIADIYAS 246 (438)
Q Consensus 172 ~l~Gv~e-Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~-~~VgID~~AGPSEvlIiAD~~An 246 (438)
..+|+.. ++. .| |...-.+|. .-|+||+|.==|..=|- |++..... -.|-.. +-|-+= +|-|++||
T Consensus 203 ~eaGlP~gvv~vv~g~~~~~g~~L~----~~p~vd~I~FTGS~~~G--~~i~~~aal~~v~lE-LGGk~p--~iV~~dAD 273 (505)
T 3prl_A 203 ADAGAPEGIIQVVTGRGSVIGDHLV----EHPGIDMITFTGGTTTG--ERISEKAKMIPVVLE-LGGKDP--AIVLDDAD 273 (505)
T ss_dssp HHTTCCTTSEEECCCCHHHHHHHHH----TCTTCCEEEEESCHHHH--HHHHHHCCSSCEEEE-CCCCEE--EEECTTCC
T ss_pred HHhCcCcCeEEEEeCCCHHHHHHHH----hCCCCCEEEEeCCHHHH--HHHHHHccCCcEEEE-CCCCCC--CccCCCCC
Confidence 5667642 332 24 565555665 25889999655554332 22111000 001111 113333 44466799
Q ss_pred HHHHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC--------------------C-HHHHHHhh
Q 013679 247 PVHIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP--------------------R-GEFASKAL 301 (438)
Q Consensus 247 p~~vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~--------------------r-~~ia~~sl 301 (438)
.+..|..++.-+ =..-.+...++.. ++.. +++.+.+.+.++.+. | .+.++.+.
T Consensus 274 l~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~ 351 (505)
T 3prl_A 274 LKLTASQIVSGAFSYSGQRCTAIKRVFVQ-DSVA-DQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDAL 351 (505)
T ss_dssp HHHHHHHHHHHHHGGGGCCSSSEEEEEEE-HHHH-HHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCccccCceEEEe-HHHH-HHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHH
Confidence 988776665422 1223344444443 4453 777777776666542 0 12233332
Q ss_pred cC-----------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHh
Q 013679 302 GH-----------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWES 339 (438)
Q Consensus 302 ~~-----------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~ 339 (438)
+. | .|+.++|+|||++++|..--=| ..|.++|.. .++.
T Consensus 352 ~~Ga~v~~gG~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 431 (505)
T 3prl_A 352 ENGATLLSGNKRQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGK 431 (505)
T ss_dssp HTTCEEEECCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHH
T ss_pred HCCCEEEecCCCCCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHH
Confidence 21 2 2455789999999999864333 567788864 5667
Q ss_pred hcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEEE
Q 013679 340 IIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 340 ~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
++ .+|.|++..++. +.++-+|- +|..|+.|..+++.|+..-++..
T Consensus 432 ~l-~aG~V~iN~~~~--------~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~ 481 (505)
T 3prl_A 432 HL-EVGTVHINAKTE--------RGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVL 481 (505)
T ss_dssp TS-CSSEEEESSCCC--------SCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEE
T ss_pred HC-CeeEEEEcCCCC--------CCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEE
Confidence 77 599999997653 12344564 55678888888999998777643
No 22
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=96.32 E-value=1.3 Score=46.06 Aligned_cols=321 Identities=17% Similarity=0.121 Sum_probs=178.8
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC-ceEE
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAE-TSVE 104 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~-~~~~ 104 (438)
.+-.+..+++-+.++++.|+=..-.++..-+. -.+.+.-+..+++.++.|...-.+.. ....
T Consensus 72 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~ 134 (484)
T 3ifg_A 72 KERAAILRRWFDLVIANSDDLALILTTEQGKP-----------------LAEAKGEIAYAASFIEWFAEEGKRVAGDTLP 134 (484)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Confidence 34445556666666666665444444444321 11223346777888887765322211 1111
Q ss_pred -ecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCc-hhhh
Q 013679 105 -NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVT-HILK 181 (438)
Q Consensus 105 -~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~-eIy~ 181 (438)
..+|...-.++.|+.-|++..|- .+|+ ...+.-..||-.||+.=|+=.+|-. ..... +....+.+|+. .++.
T Consensus 135 ~~~~~~~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~a~ALaaGN~VVlKps~~t---p~t~~~l~~l~~~aGlP~gv~~ 209 (484)
T 3ifg_A 135 TPDANKRIVVVKEPIGVCAAITPW-NFPA-AMIARKVGPALAAGCPIVVKPAEST---PFSALAMAFLAERAGVPKGVLS 209 (484)
T ss_dssp CSSTTEEEEEEEEECSSEEEECCS-SSTT-HHHHHHHHHHHHHTCCEEEECCTTS---CHHHHHHHHHHHHHTCCTTSEE
T ss_pred ccCCCceeEEEecCCcEEEEECCC-cChH-HHHHHHHHHHHHcCCEEEEECCCCC---cHHHHHHHHHHHHhCCCcccEE
Confidence 12566777889999999999995 2333 3344567899999987655433211 11122 22345566653 2322
Q ss_pred --cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHH
Q 013679 182 --AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAA 252 (438)
Q Consensus 182 --vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAa 252 (438)
.| |...-.+|.- -|+||+|.==|..=|- +|+++- .|-.. +-|-+=+ |-|++||.+..|-
T Consensus 210 vv~g~~~~~g~~L~~----~p~v~~v~FTGS~~~G~~i~~~aa~~~k-----~v~lE-lGGk~p~--iV~~dADl~~Aa~ 277 (484)
T 3ifg_A 210 VVIGDPKAIGTEITS----NPIVRKLSFTGSTAVGRLLMAQSAPTVK-----KLTLE-LGGNAPF--IVFDDADLDAAVE 277 (484)
T ss_dssp ECCBCHHHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHTGGGTC-----EEEEE-CCCCCEE--EECTTSCHHHHHH
T ss_pred EEeCCCHHHHHHHHh----CCCcCEEEEECCHHHHHHHHHHhhccCC-----ceEEe-cCCCCeE--EECCCCCHHHHHH
Confidence 24 5555556653 5889999766654331 121110 01111 1244433 3455689988777
Q ss_pred hhhhccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHHHhhcC---
Q 013679 253 DLLSQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKALGH--- 303 (438)
Q Consensus 253 DLLaQAE----Hd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~~sl~~--- 303 (438)
.++.-+= .--.+...++.. ++.. +++.+.+.+.++.+. . .+.++.+.+.
T Consensus 278 ~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~ 355 (484)
T 3ifg_A 278 GAIASKYRNNGQTCVCTNRFFVH-ERVY-DAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGAS 355 (484)
T ss_dssp HHHHHHHGGGGCSTTCCCEEEEE-GGGH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhcCCCcccCCCeEEEc-HHHH-HHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCE
Confidence 6654221 122333333333 3353 777777777776653 0 1222333211
Q ss_pred -----------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhc
Q 013679 304 -----------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESII 341 (438)
Q Consensus 304 -----------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i 341 (438)
| .|+-++|.|||++++|..--=| ..|.++|.. .+..++
T Consensus 356 v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l 435 (484)
T 3ifg_A 356 LMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEAL 435 (484)
T ss_dssp EEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHC
T ss_pred EEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhC
Confidence 1 2345789999999999853222 556777764 567777
Q ss_pred ccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 342 ENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 342 ~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
+ +|.|++..+.. .++-+|- +|..|..|..+++.|+..-++.
T Consensus 436 ~-aG~v~iN~~~~---------~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~ 481 (484)
T 3ifg_A 436 E-YGMVGINTGLI---------SNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLC 481 (484)
T ss_dssp C-CSEEEESCSCC---------CCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEE
T ss_pred C-cceEEEcCCCC---------CCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEE
Confidence 6 89999996421 1234554 4567888888999998776653
No 23
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=96.22 E-value=0.45 Score=48.56 Aligned_cols=329 Identities=11% Similarity=0.113 Sum_probs=176.7
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHH-------HHHHHHHHHHHHHHHHh
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAV-------KEAFDVAYNNIYAFHLA 95 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~-------~~ai~~A~~nI~~fh~~ 95 (438)
....+-.+..+.+-+.++++-|+=..-.++.+.+... ..+.+.. ..-+..++++++.|...
T Consensus 33 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~------------~g~~ea~~~~~~~~~~ev~~~~~~l~~~a~~ 100 (427)
T 1o20_A 33 ATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARE------------RGVKESLVDRLALNDKRIDEMIKACETVIGL 100 (427)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------------TTCCHHHHHHHCCCHHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccc------------ccccHHHHHHHhcCHHHHHHHHHHHHHHHhc
Confidence 3444555667777777777777654444444432100 0011111 12477788888888753
Q ss_pred ccCCCceEE--e-cCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHH---HH
Q 013679 96 QKSAETSVE--N-MKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEV---LY 169 (438)
Q Consensus 96 q~~~~~~~~--~-~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i---L~ 169 (438)
..+..-... . .+|...-.++.|+.-|++..| +| |...+...+||-.||+.=|+= |.. ..|.+ |+
T Consensus 101 ~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p---~p-~~~~~~~~~~ALaaGNtVVlK--ps~----~tp~t~~~l~ 170 (427)
T 1o20_A 101 KDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYE---SR-PNVTVETTILALKSGNTILLR--GGS----DALNSNKAIV 170 (427)
T ss_dssp CCCTTCEEEEEECTTSCEEEEEEEECCCEEEECC---SC-THHHHHHHHHHHHTTCCEEEE--CCG----GGHHHHHHHH
T ss_pred ccccCccccccccCCCceeEEEeecceeEEEEec---CC-hHHHHHHHHHHHHcCCEEEEE--CCH----hHHHHHHHHH
Confidence 322211111 1 236556678899999999998 45 677788889999999975544 431 33422 22
Q ss_pred -HHH----HcCCc-hhhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCceEEEE
Q 013679 170 -CAK----KAGVT-HILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVI 240 (438)
Q Consensus 170 -AA~----l~Gv~-eIy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlIi 240 (438)
... .+|+. .++.+ | |...+.++- ..-|+||+|.==|..-| .|++.....-.|-. -+-|-|= +|
T Consensus 171 ~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L---~~~~~v~~I~fTGS~~~--G~~i~~~a~~~v~l-ELGGk~p--~i 242 (427)
T 1o20_A 171 SAIREALKETEIPESSVEFIENTDRSLVLEMI---RLREYLSLVIPRGGYGL--ISFVRDNATVPVLE-TGVGNCH--IF 242 (427)
T ss_dssp HHHHHHHTTSSSCGGGEEECCCCCTHHHHHHT---TCTTTCSEEEECSCHHH--HHHHHHHCSSCBCC-CCCCCEE--EE
T ss_pred HHHHHHHHHcCCCcccEEEecCCChHHHHHHH---hCCCCccEEEeCCChHH--HHHHHHhcCCCEEE-ecCCCce--EE
Confidence 111 34664 34432 4 333333321 23578999985555322 22222100000211 1335553 44
Q ss_pred ecCCCCHHHHHHhhhhccCc---CCCCceEEEecCchhhHHHHHHHHHHHHhcCCC------H--HH----H---HHhhc
Q 013679 241 ADIYASPVHIAADLLSQAEH---GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR------G--EF----A---SKALG 302 (438)
Q Consensus 241 AD~~Anp~~vAaDLLaQAEH---d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r------~--~i----a---~~sl~ 302 (438)
-|++||.+..+-.++.-+=. .-.|...++.. ++.. ++..+.+.+.++.+.- + .+ . ...+.
T Consensus 243 V~~dADl~~Aa~~i~~~~f~n~G~C~a~~rv~V~-~~i~-d~f~~~l~~~~~~~~~~~~gg~~~~~~~Ptl~~~~~~i~~ 320 (427)
T 1o20_A 243 VDESADLKKAVPVIINAKTQRPGTCNAAEKLLVH-EKIA-KEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDWP 320 (427)
T ss_dssp ECTTSCHHHHHHHHHHHHHSCTTSTTSEEEEEEE-HHHH-HHHHHHHHHHHHHTTCEEEECHHHHHHSTTSEECCGGGTT
T ss_pred EeCCCCHHHHHHHHHHHhccCCCCCCCccEEEEe-hhhH-HHHHHHHHHHHHHcCCeeecChhhhhhCCcccCCCcchhh
Confidence 45668988766555432211 22333333332 2343 6666666655554431 0 00 0 01121
Q ss_pred ---CC---eEEEeCCHHHHHHHhhhhc-cccceecccChHH---HHhhcccccccccCCCCcccccccccCCCCCCCCCC
Q 013679 303 ---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAEK---WESIIENAGSVFLGEWTPESVGDYASGTNHVLPTYG 372 (438)
Q Consensus 303 ---~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G 372 (438)
.| .++-++|+|||++++|..- +--..|.++|... +..++ .+|.|++..++.. ++-+|-+|
T Consensus 321 eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~~G~V~iN~~~~~---------~~~~pfGg 390 (427)
T 1o20_A 321 TEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEI-DAAAVYVNASTRF---------TDGGQFGF 390 (427)
T ss_dssp CCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHC-CSSEEEESSCGGG---------CSTTTTTC
T ss_pred cccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhC-CccEEEECCCCcc---------CCCCCCCC
Confidence 24 3566899999999999853 2235677888754 55555 6899999975431 23355553
Q ss_pred -----cc----ccccCcccccccceeeEEE
Q 013679 373 -----YA----RMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 373 -----~A----R~~sgLsv~~FlK~~s~~~ 393 (438)
.. |..+..+++.|+..-++..
T Consensus 391 ~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~ 420 (427)
T 1o20_A 391 GAEIGISTQRFHARGPVGLRELTTYKFVVL 420 (427)
T ss_dssp SCCSCEECSSSSCCEECCTGGGEEEEEEEE
T ss_pred cccccccCCcccCCChHHHHHHhceEEEEE
Confidence 32 2346677888888777654
No 24
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=96.12 E-value=1.6 Score=45.47 Aligned_cols=320 Identities=16% Similarity=0.151 Sum_probs=174.0
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC--Cc
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA--ET 101 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~--~~ 101 (438)
...+-.+..+++-+.++++.|+=..-.++..-+. +.+..+.-+..+++.++.|.+.-..- ..
T Consensus 82 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~ 145 (498)
T 4f3x_A 82 TPAERSNALLKIADAIEKEADEFAALEALNCGKP----------------INAVKNDELPAIIDCWRFFAGAVRNLHAPA 145 (498)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HHHHHHTHHHHHHHHHHHHHHHTTCCEEEC
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----------------HHHHhHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 3344455566666666667665544444444321 11111233566677777665532221 11
Q ss_pred eEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHH-HHHHHH---c--
Q 013679 102 SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCAKK---A-- 174 (438)
Q Consensus 102 ~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i-L~AA~l---~-- 174 (438)
.....+|...-.++.|+.-|++..|- -|| ...+.-.+||-.||+.=| +-|.. ..|.+ +.-+++ +
T Consensus 146 ~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGNtVV--lKPs~----~tp~t~~~l~~l~~ealP 216 (498)
T 4f3x_A 146 AGEYLPGHTSMIRRDPIGIVGSIAPW---NYPLMMMAWKLAPAIGGGNTVV--FKPSE----QTPLTALKLARLIADILP 216 (498)
T ss_dssp BEEEETTEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCEEE--EECCT----TCCHHHHHHHHHHHTTSC
T ss_pred ccCCcccccceEEEcCcceEEEECCC---chHHHHHHHHHHHHHHcCCeEE--EECCc----ccHHHHHHHHHHHHHhCC
Confidence 11123566777889999999999994 355 344556789999997544 34432 23322 122222 1
Q ss_pred -CCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCH
Q 013679 175 -GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASP 247 (438)
Q Consensus 175 -Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp 247 (438)
|+=.+..-.|...-.+|. +-|+||+|.==|..=| ++|+.+- .|-.. +-|-+= +|-|++||.
T Consensus 217 ~gv~nvv~g~~~~~g~~L~----~~p~v~~V~FTGS~~~G~~i~~~aa~~~k-----~v~lE-lGGk~p--~IV~~dADl 284 (498)
T 4f3x_A 217 EGVVNVITGRGETVGNALI----NHPKVGMVSITGDIATGKKVLAAAAKTVK-----RTHLE-LGGKAP--VIVYGDADL 284 (498)
T ss_dssp TTSEEECCCCTTTHHHHHH----TCTTCCEEEEESCHHHHHHHHHHHHTTTC-----EEEEE-CCCCEE--EEECTTSCH
T ss_pred cCeEEEEeCCchHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHHHhhCC-----ceeec-CCCCCc--EEECCCCCH
Confidence 333333323554555555 2588999976664322 2232110 01111 123333 344667899
Q ss_pred HHHHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhh
Q 013679 248 VHIAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKAL 301 (438)
Q Consensus 248 ~~vAaDLLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl 301 (438)
+..|-.++.-+=.. -.+...++... +.. +++.+.+.+.++.+.- .+.++.+.
T Consensus 285 ~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~ 362 (498)
T 4f3x_A 285 EAVVNGIRTFGYYNAGQDCTAACRIYAEA-GIY-EKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAA 362 (498)
T ss_dssp HHHHHHHHHHTTGGGGCSTTCEEEEEEET-TTH-HHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCccCCceEEecH-HHH-HHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHH
Confidence 88777766433222 23334444433 243 7777777766665420 11222222
Q ss_pred cC---------------------------------------C---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---
Q 013679 302 GH---------------------------------------S---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE--- 335 (438)
Q Consensus 302 ~~---------------------------------------g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~--- 335 (438)
+. | .|+-++|.|||++++|..--=| ..|.++|..
T Consensus 363 ~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~ 442 (498)
T 4f3x_A 363 DQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAM 442 (498)
T ss_dssp HSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHH
T ss_pred HCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHH
Confidence 11 1 2344689999999999853332 456777764
Q ss_pred HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEE
Q 013679 336 KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 336 ~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 392 (438)
.+..++ .+|.|++..++... .-+|-+ |..|..|..+++.|+..-++.
T Consensus 443 ~~a~~l-~aG~V~vN~~~~~~---------~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~ 494 (498)
T 4f3x_A 443 RAASRL-QYGCTWINTHFMLT---------NEMPHGGIKQSGYGKDMSVYALEDYTAVRHIM 494 (498)
T ss_dssp HHHHHC-CSSEEEESCCSCCC---------TTSCBCCSGGGEECCBSHHHHHHHTEEEEEEE
T ss_pred HHHHhC-CcceEEEcCCCCCC---------CCCCcCCcCcCCcCccchHHHHHHhhceEEEE
Confidence 566777 59999999765422 334544 456777777888888776653
No 25
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=96.00 E-value=1.5 Score=45.66 Aligned_cols=327 Identities=21% Similarity=0.206 Sum_probs=179.5
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEE
Q 013679 25 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE 104 (438)
Q Consensus 25 ~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~ 104 (438)
..+-.+..+.+-+.++++.|+=..-.++..-+...+ ...|+ ....+.++..++..++++..+.... . .
T Consensus 71 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e----a~~ev------~~~~~~~~~~a~~~~~~~~~~~~~~-~-~ 138 (503)
T 3iwj_A 71 GAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDE----AAWDI------DDVAGCFEYYADLAEKLDARQKAPV-S-L 138 (503)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH----HHHHH------HHHHHHHHHHHHHHHHHHHHTTEEE-C-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH----HHHHH------HHHHHHHHHHHHHHHHhcCCccccc-c-c
Confidence 344455667777777778776665566655432101 00111 1344556666666666665442110 0 0
Q ss_pred ecCceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHHHHcCCch-hhh
Q 013679 105 NMKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKKAGVTH-ILK 181 (438)
Q Consensus 105 ~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA~l~Gv~e-Iy~ 181 (438)
..++...-.++.|+.-|++..|- -||-. .+.-.+||-.||+.=|+= |.. .-......| .....+|..+ ++.
T Consensus 139 ~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVlK--ps~-~tp~t~~~l~~l~~~aGlP~gvv~ 212 (503)
T 3iwj_A 139 PMDTFKSHVLREPIGVVGLITPW---NYPMLMATWKVAPALAAGCAAILK--PSE-LASLTCLELGEICKEVGLPPGVLN 212 (503)
T ss_dssp SCTTEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHTTCEEEEE--CCT-TSCHHHHHHHHHHHHHTCCTTSEE
T ss_pred cCCCccceEEEcCCceEEEECCC---chHHHHHHHHHHHHHhcCCeEEEE--CCC-cchHHHHHHHHHHHHhCcCcCeEE
Confidence 11355666788999999999995 35533 345678999999765443 432 111112222 3445566542 222
Q ss_pred --cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHH
Q 013679 182 --AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAA 252 (438)
Q Consensus 182 --vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAa 252 (438)
.| |...-.+|. .-|+||+|.=-|..=| ++|+.+- . |-.. +-|-+= +|-|++||.+..|.
T Consensus 213 vv~g~~~~~g~~L~----~~~~v~~I~FTGS~~~G~~i~~~aa~~l~-~----v~lE-lGGk~p--~iV~~dADl~~Aa~ 280 (503)
T 3iwj_A 213 ILTGLGPEAGAPLA----THPDVDKVAFTGSSATGSKIMTAAAQLVK-P----VSLE-LGGKSP--LVVFEDVDLDKAAE 280 (503)
T ss_dssp ECCSCHHHHTHHHH----TCTTCCEEEEESCHHHHHHHHHHHGGGTC-C----EEEE-CCCCEE--EEECSSSCHHHHHH
T ss_pred EEeCCcHHHHHHHh----hCCCccEEEEECcHHHHHHHHHHHhcCCC-C----EEEE-CCCCCc--eEEcCCCCHHHHHH
Confidence 24 555555565 2588999975555322 2222111 0 1111 224333 44466789988776
Q ss_pred hhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC---------------C-------HHHHHHhhc----
Q 013679 253 DLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---------------R-------GEFASKALG---- 302 (438)
Q Consensus 253 DLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---------------r-------~~ia~~sl~---- 302 (438)
.++.-+=. --.+...++... +.. +++.+.+.+.++.+. . .+.++.+.+
T Consensus 281 ~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~ 358 (503)
T 3iwj_A 281 WAIFGCFWTNGQICSATSRLILHE-SIA-TEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGAT 358 (503)
T ss_dssp HHHHHHTGGGGCCTTCEEEEEEET-TTH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhcCCCCcccCCeeEEcH-HHH-HHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCE
Confidence 66542221 223444444433 243 666666666665542 0 012222211
Q ss_pred ------------------------------------CC---eEEEeCCHHHHHHHhhhhccc-cceecccChH---HHHh
Q 013679 303 ------------------------------------HS---FMVFARDMLEGISFSNLYAPE-HLIVNVKDAE---KWES 339 (438)
Q Consensus 303 ------------------------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p~---~~l~ 339 (438)
.| .|+-++|+|||++++|..--= -..|.++|.. .+..
T Consensus 359 v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~ 438 (503)
T 3iwj_A 359 ILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTK 438 (503)
T ss_dssp EEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHH
T ss_pred EEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHH
Confidence 12 234578999999999985322 2567788865 4666
Q ss_pred hcccccccccCCCCcccccccccCCCCCCCCCC-----ccccccCcccccccceeeEEE
Q 013679 340 IIENAGSVFLGEWTPESVGDYASGTNHVLPTYG-----YARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 340 ~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~~s~~~ 393 (438)
++ .+|.|++..+.. .++-+|-+| ..|+.|..+++.|+..-++..
T Consensus 439 ~l-~aG~v~iN~~~~---------~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~ 487 (503)
T 3iwj_A 439 AF-KAGIVWVNCSQP---------CFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQ 487 (503)
T ss_dssp HC-CSSEEEESSSCC---------CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred hC-CcceEEEcCCCC---------CCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEE
Confidence 76 499999997532 134467554 567777778889988777654
No 26
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=95.97 E-value=2 Score=45.13 Aligned_cols=322 Identities=16% Similarity=0.169 Sum_probs=178.1
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC-ce
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAE-TS 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~-~~ 102 (438)
...+-.+..+.+-+.++++.|+=..-.++..-+. -.+.+.-+..+++.++.|.....+-. ..
T Consensus 92 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~-----------------~~ea~~ev~~~~~~~~~~a~~~~~~~g~~ 154 (520)
T 3ed6_A 92 TAETRGKKVRAIADKIKEHREALARLETLDTGKT-----------------LEESYADMDDIHNVFMYFAGLADKDGGEM 154 (520)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHHHHHHHHHHTTSCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHhcCee
Confidence 3344455566777777777766555555544421 11222236777777877765432211 11
Q ss_pred EEec-CceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCch-
Q 013679 103 VENM-KGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH- 178 (438)
Q Consensus 103 ~~~~-~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~e- 178 (438)
.... +|...-.++.|+.-|++..|- -||-.+ +.-.+||-.||+.=| +-|.. .-..... +......+|+..
T Consensus 155 ~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~apALaaGNtVV--lKPs~-~tp~t~~~l~~l~~eaGlP~g 228 (520)
T 3ed6_A 155 IDSPIPDTESKIVKEPVGVVTQITPW---NYPLLQASWKIAPALATGCSLV--MKPSE-ITPLTTIRVFELMEEVGFPKG 228 (520)
T ss_dssp ECCSSTTEEEEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHHTCEEE--EECCT-TCCHHHHHHHHHHHHHCCCTT
T ss_pred cccCCCCCcccccccCccEEEEECCC---ccHHHHHHHHHHHHHHcCCEEE--EEcCC-cchHHHHHHHHHHHHhCCCCC
Confidence 1111 466777889999999999995 355433 356789999997544 33432 1111112 223445666542
Q ss_pred hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcH------HHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 179 ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQ------YVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 179 Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~------yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
++. .| |...-.+|. +-|+||+|.==|.. +.++|+++- .|-..+ -|-+=++| +++||.+.
T Consensus 229 vvnvv~g~~~~~g~~L~----~~p~vd~V~FTGS~~vG~~i~~~aa~~l~-----~v~lEL-GGk~p~IV--~~dADl~~ 296 (520)
T 3ed6_A 229 TINLILGAGSEVGDVMS----GHKEVDLVSFTGGIETGKHIMKNAANNVT-----NIALEL-GGKNPNII--FDDADFEL 296 (520)
T ss_dssp SEEECCSCCTTHHHHHH----HCTTCSEEEEESCHHHHHHHHHHHHTTTC-----EEEEEC-CCCCEEEE--CTTSCHHH
T ss_pred eEEEEeCCChHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHhhhcCC-----CEEEEc-CCCCeeEE--CCCCCHHH
Confidence 222 13 444444444 24889999765653 223332221 022211 24444433 33589988
Q ss_pred HHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcC
Q 013679 250 IAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGH 303 (438)
Q Consensus 250 vAaDLLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~ 303 (438)
.|-.++.-+=.. -.+...++.. ++.. +++.+.+.+.++.+.- .+.++.+.+.
T Consensus 297 Aa~~i~~~~f~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~ 374 (520)
T 3ed6_A 297 AVDQALNGGYFHAGQVCSAGSRILVQ-NSIK-DKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAE 374 (520)
T ss_dssp HHHHHHHHHHGGGGTSTTCCCEEEEE-HHHH-HHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCcccCceEEEc-HHHH-HHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhC
Confidence 777665432221 2233333333 3453 7777777777666520 1222222211
Q ss_pred ------------------------------------------C---eEEEeCCHHHHHHHhhhhccc-cceecccChH--
Q 013679 304 ------------------------------------------S---FMVFARDMLEGISFSNLYAPE-HLIVNVKDAE-- 335 (438)
Q Consensus 304 ------------------------------------------g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p~-- 335 (438)
| .|+-++|+|||++++|..--= -..|.++|..
T Consensus 375 Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a 454 (520)
T 3ed6_A 375 GATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKA 454 (520)
T ss_dssp TCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHH
T ss_pred CCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 2 235579999999999985422 2567788864
Q ss_pred -HHHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 336 -KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 336 -~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
.+..+++ +|.|++..+... +.-+|- +|..|..|..+++.|+..-++.
T Consensus 455 ~~~a~~l~-aG~V~iN~~~~~---------~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~ 507 (520)
T 3ed6_A 455 QRVANKLK-LGTVWINDFHPY---------FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHIL 507 (520)
T ss_dssp HHHHHHSC-CSEEEESCSCCC---------CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHCC-cceEEECCCCCC---------CCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 5667775 999999976432 122444 4556777778888998877654
No 27
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=95.94 E-value=1.9 Score=44.79 Aligned_cols=320 Identities=15% Similarity=0.061 Sum_probs=176.7
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC---CC
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS---AE 100 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~---~~ 100 (438)
...+-.+..+.+-+.++++.|+=..-.++..-+. + .+.+.-+..+++.++.|.. +.. ..
T Consensus 79 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~-~ea~~ev~~~~~~~~~~a~-~~~~~~g~ 140 (500)
T 2j6l_A 79 PAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKI----------------L-VEGVGEVQEYVDICDYAVG-LSRMIGGP 140 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCC----------------H-HHHHHHHHHHHHHHHHHHH-HTTTCCCB
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----------------H-HHHHHHHHHHHHHHHHHHH-HHHHhcCc
Confidence 3444555666666666666665443334433211 0 0112224445555554432 222 12
Q ss_pred ceEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHH--------HH
Q 013679 101 TSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLY--------CA 171 (438)
Q Consensus 101 ~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~--------AA 171 (438)
+.....+|...-.++.|+.-|++..|- -|| ...++..+||-.||+.=| +=|.. ..|.+-. +.
T Consensus 141 ~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VV--lKps~----~tp~t~~~l~~l~~~al 211 (500)
T 2j6l_A 141 ILPSERSGHALIEQWNPVGLVGIITAF---NFPVAVYGWNNAIAMICGNVCL--WKGAP----TTSLISVAVTKIIAKVL 211 (500)
T ss_dssp EECCSSTTEEEEEEEEECSEEEEECCS---SSTTHHHHHHHHHHHHTTCEEE--EECCG----GGHHHHHHHHHHHHHHH
T ss_pred cccccCCCceeEEEEecccEEEEECCC---cchhhHHHHHHHHHHHhCCEEE--EECCC----ccHHHHHHHHHHHHHHH
Confidence 222223455555678999999999995 466 466788899999987544 44442 4454211 22
Q ss_pred HHcCCc-hhhhc--chHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCceEEEEec
Q 013679 172 KKAGVT-HILKA--GGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIAD 242 (438)
Q Consensus 172 ~l~Gv~-eIy~v--GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgID~~AGPSEvlIiAD 242 (438)
..+|+. .++.+ ||...-.+|. .-|+||+|.==|..=|- +|+++- .|-..+ -|-| -+|-|
T Consensus 212 ~~aGlP~gvv~vv~g~~~~g~~L~----~~~~vd~I~FTGS~~~g~~i~~~aa~~l~-----~v~lEL-GGk~--p~iV~ 279 (500)
T 2j6l_A 212 EDNKLPGAICSLTCGGADIGTAMA----KDERVNLLSFTGSTQVGKQVGLMVQERFG-----RSLLEL-GGNN--AIIAF 279 (500)
T ss_dssp HHTTCCGGGEEEECCSHHHHHHHH----HCTTCSEEEEESCHHHHHHHHHHHHHTTC-----EEEEEC-CCCE--EEEEC
T ss_pred HhhcCCcCeEEEEeCCHHHHHHHh----cCCCcCEEEEECCHHHHHHHHHHhccCCC-----ceEEEc-CCCC--ceEEC
Confidence 345764 33332 6665444554 24889999544443221 222211 144443 3555 34556
Q ss_pred CCCCHHHHHHhhhhccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C-----------H-------HH
Q 013679 243 IYASPVHIAADLLSQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R-----------G-------EF 296 (438)
Q Consensus 243 ~~Anp~~vAaDLLaQAE----Hd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r-----------~-------~i 296 (438)
++||.+..|-.++.-+= ..-.|...++.... .. +++.+.+.+.++.+. . . +.
T Consensus 280 ~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 357 (500)
T 2j6l_A 280 EDADLSLVVPSALFAAVGTAGQRCTTARRLFIHES-IH-DEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGA 357 (500)
T ss_dssp TTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETT-TH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHH-HH-HHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHH
Confidence 67899887777654322 12334444444332 43 667777776666552 0 0 11
Q ss_pred HHHhhc--------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccceecccCh
Q 013679 297 ASKALG--------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDA 334 (438)
Q Consensus 297 a~~sl~--------------------------------------~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p 334 (438)
++.+.+ .| .++.++|+|||++++|..- +=-..|.++|.
T Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~ 437 (500)
T 2j6l_A 358 VEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDL 437 (500)
T ss_dssp HHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCH
T ss_pred HHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 222211 02 2344789999999999953 22366788888
Q ss_pred HHHHhhc----ccccccccCCCCcccccccccCCCCCCC-----CCCccccccCcccccccceeeEE
Q 013679 335 EKWESII----ENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 335 ~~~l~~i----~nAGaiFlG~~sp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
.....-. -.+|.|++..++. +.+.-+| .+|..|+.+..+++.|+..-++.
T Consensus 438 ~~a~~~~~~~~~~~G~V~vN~~~~--------~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~ 496 (500)
T 2j6l_A 438 GRIFRWLGPKGSDCGIVNVNIPTS--------GAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCT 496 (500)
T ss_dssp HHHHHHHSTTSCCSSEEEESSCTT--------CCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEE
T ss_pred HHHHHHHhhccCCeeEEEECCCCc--------cCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEE
Confidence 7655444 3679999996542 1112234 35778888888999999888764
No 28
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=95.86 E-value=0.71 Score=47.79 Aligned_cols=339 Identities=12% Similarity=0.104 Sum_probs=171.1
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCc
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVEN-VSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAET 101 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~-~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~ 101 (438)
....+-.+..+.+-+.++++.|+=..-.++...+..-..+.-+ ..|+.. -..+-++.++++++++.+...+...
T Consensus 33 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~-----~~~~~~~~~a~~~~~~~~~~~~~g~ 107 (468)
T 1vlu_A 33 ISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDL-----FKGDKFEVMLQGIKDVAELEDPVGK 107 (468)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCT-----TSTTHHHHHHHHHHHHHHSCCSSSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhh-----hhHHHHHHHHHHHHHHhhcCCCCCe
Confidence 4445556667777777777777655555544432100000000 011111 0223477788888888765443221
Q ss_pred eEE---ecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHH---HHH-HH---
Q 013679 102 SVE---NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE---VLY-CA--- 171 (438)
Q Consensus 102 ~~~---~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~---iL~-AA--- 171 (438)
... ..+|...-.++.|+.-|++..|- . |...++-.+||-.||+.=| +-|.. ..|. .|+ ..
T Consensus 108 ~~~~~~~~~~~~~~~~~~P~GVV~~I~pw---N-P~~~~~~~~~ALaaGN~VV--lKps~----~tp~t~~~l~~l~~~a 177 (468)
T 1vlu_A 108 VKMARELDDGLTLYQVTAPVGVLLVIFES---R-PEVIANITALSIKSGNAAI--LKGGK----ESVNTFREMAKIVNDT 177 (468)
T ss_dssp EEEEEEEETTEEEEEEEEECCEEEEEESS---C-THHHHHHHHHHHHHTCEEE--EECCG----GGHHHHHHHHHHHHHH
T ss_pred ecccccCCCCceeEEEecCcceEEEEecc---C-hHHHHHHHHHHHHcCCEEE--EEcCC----ccHHHHHHHHHHHHHH
Confidence 111 12466667889999999999984 3 5777888999999998544 33431 2332 222 12
Q ss_pred -HH----cCCc----hhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcccccCCCCCceEEEEec
Q 013679 172 -KK----AGVT----HILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMISIDMPAGPSEVLVIAD 242 (438)
Q Consensus 172 -~l----~Gv~----eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD 242 (438)
.. +|+. .+.. +|...-.+|. .-|.||+|.==|.. ...|++.....-.| +=-+-|-+ -+|-|
T Consensus 178 L~e~~~~aGlP~gvv~vv~-~~~~~g~~L~----~~p~vd~I~fTGS~--~~g~~i~~~a~kpv-~lElGGk~--p~iV~ 247 (468)
T 1vlu_A 178 IAQFQSETGVPVGSVQLIE-TRQDVSDLLD----QDEYIDLVVPRGSN--ALVRKIKDTTKIPV-LGHADGIC--SIYLD 247 (468)
T ss_dssp HHHHHHHHCCCTTSEEECC-CC--CGGGGG----CTTTCCEEEEESCH--HHHHHHHHTCCSCB-TTBCSCCE--EEEEC
T ss_pred HHhhchhcCCCCCcEEEEC-CHHHHHHHHh----hCCCcCEEEEECCH--HHHHHHHHhcCCCE-EeecCCcc--ceEEC
Confidence 24 6654 2333 5532222222 34889999544442 22222221100001 11122333 34556
Q ss_pred CCCCHHHHHHhhhhccCcCCC---Cce-EEEecC-chhhHHHHHHHHHHHHh---cCCC-HHH-HHHh------------
Q 013679 243 IYASPVHIAADLLSQAEHGPD---SQV-VLVIVG-DGVDLDAIEQEISKQCQ---SLPR-GEF-ASKA------------ 300 (438)
Q Consensus 243 ~~Anp~~vAaDLLaQAEHd~~---a~~-vLvt~s-~~la~~~V~~ei~~ql~---~l~r-~~i-a~~s------------ 300 (438)
++||.+..|-.++.-+=.... |.. +||-.+ +++. +++.+++.+.-- .-|. ... ++.+
T Consensus 248 ~dADl~~Aa~~i~~~~~~n~G~C~a~~rvlV~~~id~f~-~~l~~~~~~~~v~~~Gdp~~~~~~i~~a~~~~~gG~g~~P 326 (468)
T 1vlu_A 248 EDADLIKAKRISLDAKTNYPAGCNAMETLLINPKFSKWW-EVLENLTLEGGVTIHATKDLKTAYFDKLNELGKLTEAIQC 326 (468)
T ss_dssp TTCCHHHHHHHHHHTTCC----CCCCEEEEECTTSTTHH-HHHHHHHHHHCCCBEECHHHHHHHHHHHHHHTCCCHHHHT
T ss_pred CCCCHHHHHHHHHHHhcCCCCcCCcCcEEEEECCHHHHH-HHHHHHHHhcCCeecCCHHHhcccccccceeeccCCCCCC
Confidence 679999887776654433322 222 444333 3453 666655554321 1111 122 2221
Q ss_pred ----------hc---CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhcccccccccCCCCccccccc
Q 013679 301 ----------LG---HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDY 360 (438)
Q Consensus 301 ----------l~---~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY 360 (438)
+. .| .++.++|+|||++++|..--=| ..|.++|.. .+..++ .+|.|++..++....+=-
T Consensus 327 tvlv~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~V~vN~~~~~~~~~p 405 (468)
T 1vlu_A 327 KTVDADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGV-DSSGVYWNASTRFADGFR 405 (468)
T ss_dssp TBC-------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHC-CCSEEEESSCGGGCC---
T ss_pred ceeeCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhC-CeeEEEEcCCCCCCCCCC
Confidence 11 12 4677899999999999963323 456778865 455666 479999997553210000
Q ss_pred cc-----CCCCCCCCCCccccccCcccccccceeeEEE
Q 013679 361 AS-----GTNHVLPTYGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 361 ~a-----GpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
+. |. -++|..|. |..+++.|++.-++..
T Consensus 406 fG~Gg~~G~----~~SG~g~~-G~~gl~~f~~~K~v~~ 438 (468)
T 1vlu_A 406 YGFGAEVGI----STSKIHAR-GPVGLDGLVSYQYQIR 438 (468)
T ss_dssp ------------------------CCSGGGEEEEEEEE
T ss_pred CCCCCCcce----ecCCCCCC-cchHHHHhcceEEEEE
Confidence 11 22 23566777 8889999998888764
No 29
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=95.78 E-value=1.3 Score=45.41 Aligned_cols=326 Identities=18% Similarity=0.161 Sum_probs=172.4
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcc-CCCce
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQK-SAETS 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~-~~~~~ 102 (438)
...+-.+..+.+-+.++++-|+=..-.++..-+...+.. . .|+ ....+.++.++++++++...+. +..+.
T Consensus 48 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~--~ev------~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 118 (457)
T 3lns_A 48 DVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVD-L--AEI------GAVLHEIDFALAHLDEWVAPVSVPSPDI 118 (457)
T ss_dssp SHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-H--HTH------HHHHHHHHHHHHHHHHHTSCEEECCCGG
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-H--HHH------HHHHHHHHHHHHHHHHhhcccccccccc
Confidence 344455566677777777777655555555543210000 0 011 1233445556666655543221 11111
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHH-HHH---Hc---C
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLY-CAK---KA---G 175 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~-AA~---l~---G 175 (438)
..|...-.++.|+.-|++..|- .+|+ ...++-++||-.||+.=| +-|.. ..|.+-. -++ .+ |
T Consensus 119 ---~~~~~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~VV--lKps~----~tp~t~~~l~~l~~~alP~g 187 (457)
T 3lns_A 119 ---IAPSECYVVQEPYGVTYIIGPF-NYPV-NLTLTPLIGAIIGGNTCI--IKPSE----TTPETSAVIEKIIAEAFAPE 187 (457)
T ss_dssp ---GCSCEEEEEEEECCEEEEECCS-SSTT-HHHHHHHHHHHHTTCEEE--EECCT----TCHHHHHHHHHHHHHHCCTT
T ss_pred ---CCCcceEEEeecceEEEEECCC-cchH-HHHHHHHHHHHHcCCEEE--EECCC----CChHHHHHHHHHHHHhCCHh
Confidence 2344566789999999999995 3443 344556789999997543 44542 3443221 111 11 2
Q ss_pred CchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 176 VTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 176 v~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
+=.+. -||.....+|. + |+||+|.==|..=| ++|+++. . |-. -+-|-+= +|-|++||.+.
T Consensus 188 vv~vv-~g~~~~~~~L~----~-~~vd~V~fTGS~~~G~~i~~~aa~~l~-p----v~l-ElGGk~p--~iV~~dADl~~ 253 (457)
T 3lns_A 188 YVAVI-QGGRDENSHLL----S-LPFDFIFFTGSPNVGKVVMQAAAKHLT-P----VVL-ELGGKCP--LIVLPDADLDQ 253 (457)
T ss_dssp TEEEC-CCCHHHHHHHT----T-SCCSEEEEESCHHHHHHHHHHHHTTTC-C----EEE-ECCCCEE--EEECTTCCHHH
T ss_pred hEEEe-cCCHHHHHHHh----c-CCCCEEEEECCHHHHHHHHHHHhhccC-c----eEE-ECCCCCC--CeECCCCCHHH
Confidence 22222 25666666664 2 68999976665433 2232211 0 100 1223333 44566799988
Q ss_pred HHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcC-CC---------H-------HHHHH---------
Q 013679 250 IAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSL-PR---------G-------EFASK--------- 299 (438)
Q Consensus 250 vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l-~r---------~-------~ia~~--------- 299 (438)
.|-.++.-+ =.--.+...++... +.. +++.+.+.+.++.+ |. . +.++.
T Consensus 254 Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~p~~~~~gpli~~~~~~rv~~~i~~a~~~~~~gg 331 (457)
T 3lns_A 254 TVNQLMFGKFINSGQTXIAPDYLYVHY-SVK-DALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLEATQGQVLVGS 331 (457)
T ss_dssp HHHHHHHHHHGGGGCCTTSEEEEEEEG-GGH-HHHHHHHHHHHHHHCCSTTTTCCCSSHHHHHHHHHHHHHCCSEEEECC
T ss_pred HHHHHHHHHHHhCCCCccCCceEEEcH-HHH-HHHHHHHHHHHHhcCCCcccccCCCCHHHHHHHHHHHHhcCCeEEeCC
Confidence 777665322 11223444444332 243 55555555555433 10 0 01111
Q ss_pred ----------------------hhc---CC---eEEEeCCHHHHHHHhhhhcccc--ceecccChH---HHHhhcccccc
Q 013679 300 ----------------------ALG---HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDAE---KWESIIENAGS 346 (438)
Q Consensus 300 ----------------------sl~---~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p~---~~l~~i~nAGa 346 (438)
.+. .| .|+.++|+|||++++|.+-|-. ..|.++|.. .+..++ .+|.
T Consensus 332 ~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~ 410 (457)
T 3lns_A 332 QADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQI-QSGD 410 (457)
T ss_dssp CEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTS-CCSE
T ss_pred ccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhC-Ccce
Confidence 111 13 3456899999999999944444 557788875 456666 4899
Q ss_pred cccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEEE
Q 013679 347 VFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 347 iFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
|++..++... .+.-+|- +|..|+.|..+++.|+..-++..
T Consensus 411 v~vN~~~~~~-------~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~ 455 (457)
T 3lns_A 411 AQVNGVMLHA-------FSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI 455 (457)
T ss_dssp EEESCCSGGG-------GCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEE
T ss_pred EEEcCCCCCC-------CCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEe
Confidence 9999754211 1233444 45677777788888887776653
No 30
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=95.67 E-value=2.5 Score=43.95 Aligned_cols=328 Identities=14% Similarity=0.103 Sum_probs=176.4
Q ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEE
Q 013679 25 FSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVE 104 (438)
Q Consensus 25 ~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~ 104 (438)
..+-.+..+.+.+.++++.|+=..-.++..-+.. .+.+.-+..+++.++.|.+.-..-.-...
T Consensus 55 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~ 117 (486)
T 3pqa_A 55 ITKRYNILMNIAKQIKEKKEELAKILAIDAGKPI-----------------KQARVEVERSIGTFKLAAFYVKEHRDEVI 117 (486)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCcee
Confidence 3444556667777777777765555555554321 11112244555555555432211000111
Q ss_pred ecCceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHc----CCch
Q 013679 105 NMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKA----GVTH 178 (438)
Q Consensus 105 ~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~----Gv~e 178 (438)
..+|...-.++.|+.-|++..|- -||- ..+...+||-.||+.=|+=.+|-. ..... +......+ |+.+
T Consensus 118 ~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVlKps~~t---p~t~~~l~~l~~~al~~~GlP~ 191 (486)
T 3pqa_A 118 PSDDRLIFTRREPVGIVGAITPF---NFPLNLSAHKIAPAIATGNVIVHHPSSKA---PLVCIELAKIIENALKKYNVPL 191 (486)
T ss_dssp CCTTEEEEEEEEECSEEEEEECS---SSHHHHHHHHHHHHHHTTCEEEEEECTTS---CHHHHHHHHHHHHHHHHTTCCG
T ss_pred cCCCceeEEEEccccEEEEECCC---chHHHHHHHHHHHHHHcCCEEEEECCCCc---hHHHHHHHHHHHHHHHhcCCCC
Confidence 12355667789999999999995 4664 345567899999975444333211 11111 22233344 7653
Q ss_pred -hhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCC-CcccccCCCCCceEEEEecCCCCHHHHHHh
Q 013679 179 -ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSE-AMISIDMPAGPSEVLVIADIYASPVHIAAD 253 (438)
Q Consensus 179 -Iy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~-~~VgID~~AGPSEvlIiAD~~Anp~~vAaD 253 (438)
++.+ | |...-.+|. .-|+||+|.==|..=|- |++..... -.|-. -+-|-+= +|-|++||.+..|-.
T Consensus 192 gvv~vv~g~~~~~g~~L~----~~p~vd~V~fTGS~~~g--~~i~~~aa~~~v~l-ELGGk~p--~iV~~dADl~~Aa~~ 262 (486)
T 3pqa_A 192 GVYNLLTGAGEVVGDEIV----VNEKVNMISFTGSSKVG--ELITKKAGFKKIAL-ELGGVNP--NIVLKDADLNKAVNA 262 (486)
T ss_dssp GGEEECCSCTTTHHHHHH----HCTTCCEEEEESCHHHH--HHHHHHCCSSEEEE-ECCCCEE--EEECTTSCHHHHHHH
T ss_pred CeEEEEeCCchHHHHHHH----hCCCccEEEEECChHHH--HHHHHHcCCCceee-ccCCcCc--EEEcCCCCHHHHHHH
Confidence 3322 3 333334443 24889999866664332 22211000 00111 1124333 444667999988777
Q ss_pred hhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhcCC---
Q 013679 254 LLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALGHS--- 304 (438)
Q Consensus 254 LLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~~g--- 304 (438)
++.-+=.. -.|...++... +.. +++.+.+.+.++.+.- .+.++.+.+.|
T Consensus 263 i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v 340 (486)
T 3pqa_A 263 LIKGSFIYAGQVCISVGMILVDE-SIA-DKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKL 340 (486)
T ss_dssp HHHHHHGGGGCSTTSEEEEEEEG-GGH-HHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHhcCCCCccCCcEEEEeH-HHH-HHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEE
Confidence 66433222 23444444433 353 7777777777665420 12333333221
Q ss_pred ----------------------------------eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhcccccc
Q 013679 305 ----------------------------------FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGS 346 (438)
Q Consensus 305 ----------------------------------~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGa 346 (438)
.|+-++| |||++++|..--=| ..|.++|.. .+..++ .+|.
T Consensus 341 ~~gG~~~g~~~~Ptvl~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~ 418 (486)
T 3pqa_A 341 LLGGKRDKALFYPTILEVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENL-EFGG 418 (486)
T ss_dssp EECCCEETTEECCEEEECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHS-CSSE
T ss_pred EecCCCCCcEeccEEEeCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhC-Ccce
Confidence 1345678 99999999853322 567778864 566666 4899
Q ss_pred cccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEEEeCH
Q 013679 347 VFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQSLTE 396 (438)
Q Consensus 347 iFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~~~s~ 396 (438)
|++..++... ..-+|-+ |..|+.|..+++.|++.-++..-..
T Consensus 419 v~vN~~~~~~--------~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 419 VVINDSSLFR--------QDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKA 465 (486)
T ss_dssp EEESSCTTCC--------CTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC-
T ss_pred EEEeCCCCcC--------CCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcCC
Confidence 9999865411 1135544 5677888888999998877655433
No 31
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=95.66 E-value=2.6 Score=44.08 Aligned_cols=280 Identities=17% Similarity=0.123 Sum_probs=160.9
Q ss_pred HHHHHHHHHHHHHHhccCCCceE--EecCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCC
Q 013679 81 AFDVAYNNIYAFHLAQKSAETSV--ENMKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPS 158 (438)
Q Consensus 81 ai~~A~~nI~~fh~~q~~~~~~~--~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~ 158 (438)
-+..+++.++.|.....+..... ...+|...-.++.|+.-|++..|- .+|+ ...+.-.+||-.||+.=|+ -|..
T Consensus 130 ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~Pw-N~P~-~~~~~~~a~ALaaGN~VVl--KPs~ 205 (504)
T 3ek1_A 130 EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPW-NFPA-AMITRKAAPALAAGCTMIV--RPAD 205 (504)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCS-SSTT-HHHHHHHHHHHHHTCEEEE--ECCT
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCC-cchH-HHHHHHHHHHHHcCCEEEE--ECCC
Confidence 35667777776655332211111 123466677889999999999994 3333 3344567899999975443 3432
Q ss_pred CCCCCCHH-HHHHHHHcCCch-hhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHH---HHHhcCCCC
Q 013679 159 QDGSICKE-VLYCAKKAGVTH-ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAA---KMILQNSEA 224 (438)
Q Consensus 159 ~~G~i~p~-iL~AA~l~Gv~e-Iy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~A---K~~v~~~~~ 224 (438)
.-..... +......+|+.. ++.+ | |...-.+|.- -|+||+|.==|..=| ++| |++...
T Consensus 206 -~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~----~p~v~~V~FTGS~~~G~~i~~~aa~~lk~v~lE--- 277 (504)
T 3ek1_A 206 -LTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTS----NDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLE--- 277 (504)
T ss_dssp -TSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHGGGTCEEEEE---
T ss_pred -cChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHh----CCCcCEEEEECCHHHHHHHHHhhhhhcCCeEec---
Confidence 1111222 223456677653 3322 4 5555555653 588999976665432 222 222211
Q ss_pred cccccCCCCCceEEEEecCCCCHHHHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC--------
Q 013679 225 MISIDMPAGPSEVLVIADIYASPVHIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP-------- 292 (438)
Q Consensus 225 ~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~-------- 292 (438)
+-|-+= +|-|++||.+..|..++.-+ =.--.+...++.. ++.. +++.+.+.+.++.+.
T Consensus 278 ------LGGk~p--~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 278 ------LGGNAP--FIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQ-RGVY-DKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp ------CCCCEE--EEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEE-HHHH-HHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ------CCCCCe--eEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEe-hhHH-HHHHHHHHHHHhhcccCCCcccc
Confidence 124333 44466799988777665422 1122344444443 4454 777777777776651
Q ss_pred -------C-------HHHHHHhhcC------------------------------------C---eEEEeCCHHHHHHHh
Q 013679 293 -------R-------GEFASKALGH------------------------------------S---FMVFARDMLEGISFS 319 (438)
Q Consensus 293 -------r-------~~ia~~sl~~------------------------------------g---~ii~v~~l~ea~~~~ 319 (438)
. .+.++.+.+. | .|+-++|+|||++++
T Consensus 348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~a 427 (504)
T 3ek1_A 348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQA 427 (504)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHH
Confidence 0 1223333221 1 234578999999999
Q ss_pred hhhcccc-ceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceee
Q 013679 320 NLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMT 390 (438)
Q Consensus 320 N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s 390 (438)
|..--=| ..|.++|.. .+..+++ +|.|++..++. .+.-+|-+ |..|..|..+++.|++.-+
T Consensus 428 N~~~~GL~a~v~t~d~~~a~~~a~~l~-aG~V~vN~~~~---------~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~ 497 (504)
T 3ek1_A 428 NDTIFGLAAYFYTENFSRAIRVSEALE-YGMVGHNTGLI---------SNEVAPFGGVKQSGLGREGSKYGIEEYLETKY 497 (504)
T ss_dssp HCSSCCSEEEEECCBHHHHHHHHHHSC-CSEEEESCSCC---------CCSSSCBCCSGGGEESCBSTTTSGGGGEEEEE
T ss_pred hCCCCCeEEEEEcCCHHHHHHHHHhCC-cCeEEECCCCC---------CCCCCCcCCcCcCcCCCCCcHHHHHHhhceEE
Confidence 9853222 556777765 4666774 99999996541 12335544 5678888889999988776
Q ss_pred EE
Q 013679 391 VQ 392 (438)
Q Consensus 391 ~~ 392 (438)
+.
T Consensus 498 v~ 499 (504)
T 3ek1_A 498 IC 499 (504)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 32
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=95.66 E-value=2.5 Score=44.01 Aligned_cols=289 Identities=16% Similarity=0.128 Sum_probs=153.6
Q ss_pred HHHHHHHHHHHHHHhccCCCceEEe--cCceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCC
Q 013679 81 AFDVAYNNIYAFHLAQKSAETSVEN--MKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPP 157 (438)
Q Consensus 81 ai~~A~~nI~~fh~~q~~~~~~~~~--~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP 157 (438)
-+..+++.++.|.....+..-.... .+|...-.++.|+.-|++..|- -||-.+ +...+||-.||+.=|+ -|.
T Consensus 110 Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVl--Kps 184 (508)
T 3r64_A 110 EITLAGNITKESASFPGRVHGRISPSNTPGKENRVYRVAKGVVGVISPW---NFPLNLSIRSVAPALAVGNAVVI--KPA 184 (508)
T ss_dssp HHHHHHHHHHHHTTSTTTCCEEEECCSSTTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEEE--ECC
T ss_pred HHHHHHHHHHHHHHHhhhhcCcccccCCCCceeEEEEecceEEEEECCC---cchHHHHHHHHHHHHhcCCEEEE--ECC
Confidence 3667777777665432221112221 3567778889999999999995 455443 4567899999975443 343
Q ss_pred CCCCCCCHHHH-----HHHHHcCCc-hhhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHH-HHHhcC--CCCc
Q 013679 158 SQDGSICKEVL-----YCAKKAGVT-HILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQN--SEAM 225 (438)
Q Consensus 158 ~~~G~i~p~iL-----~AA~l~Gv~-eIy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A-K~~v~~--~~~~ 225 (438)
. ..|.+- .....+|+. .++.+ | |...-.+|.- -|+||+|.==|..=|-.+ .+..+. .--.
T Consensus 185 ~----~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~----~p~vd~I~fTGS~~~g~~i~~~aa~~~~l~~ 256 (508)
T 3r64_A 185 S----DTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVT----HAVPKLISFTGSTPVGRRVGELAINGGPMKT 256 (508)
T ss_dssp T----TCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHH----CSSCSEEEEESCHHHHHHHHHHHHSSSSCCE
T ss_pred C----CChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhh----CCCccEEEEECCHHHHHHHHHHhhcccCCCc
Confidence 2 344322 244556654 23321 3 4544455542 488999976666433211 000000 0000
Q ss_pred ccccCCCCCceEEEEecCCCCHHHHHHhhhhc----cCcCCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C----
Q 013679 226 ISIDMPAGPSEVLVIADIYASPVHIAADLLSQ----AEHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R---- 293 (438)
Q Consensus 226 VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQ----AEHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r---- 293 (438)
|-.. +-|-+= +|-|++||.+..|-.++.- +=.--.+...++.. ++.. +++.+.+.+.++.+. .
T Consensus 257 v~lE-lGGk~p--~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~~G~p~~~~~ 331 (508)
T 3r64_A 257 VALE-LGGNAP--FVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVD-AAVH-DEFLEKFVEAVKNIPTGDPSAEGT 331 (508)
T ss_dssp EEEE-CCCCCE--EEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEE-HHHH-HHHHHHHHHHHHTCCBSCTTSSSC
T ss_pred eEee-cCCcCc--eEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEe-hhHH-HHHHHHHHHHHHhccCCCCccCCC
Confidence 1111 124443 4446679998877666542 22223333344443 3453 777777777666641 0
Q ss_pred --------------HHHHHHhhcC-----------------------------------C---eEEEeCCHHHHHHHhhh
Q 013679 294 --------------GEFASKALGH-----------------------------------S---FMVFARDMLEGISFSNL 321 (438)
Q Consensus 294 --------------~~ia~~sl~~-----------------------------------g---~ii~v~~l~ea~~~~N~ 321 (438)
.+.++.+.+. | .++.++|+|||++++|.
T Consensus 332 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~ 411 (508)
T 3r64_A 332 LVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANA 411 (508)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCEETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTS
T ss_pred cccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHHHHhC
Confidence 1223322211 2 23457899999999998
Q ss_pred hcccc-ceecccChH---HHHhhcccccccccCCCCccccccc-ccCCCCCCCCCCccccccCcccccccceeeEE
Q 013679 322 YAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDY-ASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 322 ~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY-~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
.--=| ..|.++|.. .+..++ .+|.|++..++....... +.| -..+|+.|+.|..+++.|++.-++.
T Consensus 412 ~~~gL~a~v~t~d~~~a~~~~~~l-~aG~V~vN~~~~~~~~~~PfGG----~~~SG~Gr~~G~~~l~~ft~~k~v~ 482 (508)
T 3r64_A 412 SDFGLSAAVWSKDIDRAAQFALQI-DSGMVHINDLTVNDEPHVMFGG----SKNSGLGRFNGDWAIEEFTTDRWIG 482 (508)
T ss_dssp SSCCSCEEEECSCHHHHHHHHTTS-CSSEEEECC------------------------CCCHHHHHHHTEEEEEEE
T ss_pred CCCCcEEEEEcCCHHHHHHHHHhC-CcceEEEcCCCCCCCCCCCcCC----cCCCCCCcCccHHHHHHhhceEEEE
Confidence 64322 567788874 466666 589999998653210000 111 1356778888888999998877654
No 33
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=95.56 E-value=2.3 Score=44.43 Aligned_cols=281 Identities=17% Similarity=0.145 Sum_probs=152.6
Q ss_pred HHHHHHHHHHHHHhccCC-CceEEe-cCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCC
Q 013679 82 FDVAYNNIYAFHLAQKSA-ETSVEN-MKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPS 158 (438)
Q Consensus 82 i~~A~~nI~~fh~~q~~~-~~~~~~-~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~ 158 (438)
+..+++.++.|.+.-.+- .-.+.. .+|...-.++.|+.-|++..|- -|| ...+...+||-.||+.=|+= |..
T Consensus 125 v~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VVlK--ps~ 199 (515)
T 2d4e_A 125 VARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPW---NAPLMLSTWRIAPALAFGNTVVLK--PAE 199 (515)
T ss_dssp HHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCS---SSHHHHHHHHHHHHHHTTCCEEEE--CCT
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCC---CchhhhhhhhhhHHHHcCCeeeec--CCC
Confidence 566777777765432211 111121 3466667789999999999995 477 55667788999999864443 431
Q ss_pred CCCCCCH-HHHHHHHHcCCch-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCccc
Q 013679 159 QDGSICK-EVLYCAKKAGVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMIS 227 (438)
Q Consensus 159 ~~G~i~p-~iL~AA~l~Gv~e-Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~Vg 227 (438)
.-.... .+....+.+|... ++. -| |.+.-.+|. .-|+||+|.==|..=| ++|+.+. .|-
T Consensus 200 -~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~----~~p~vd~I~FTGS~~~G~~I~~~aa~~l~-----~v~ 269 (515)
T 2d4e_A 200 -WSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALV----AHPLVPLLTLTGETETGKIVMRNAADHLK-----RLS 269 (515)
T ss_dssp -TSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHGGGTC-----EEE
T ss_pred -CcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHH----hCCCcCEEEEeCcHHHHHHHHHHHhhcCC-----ceE
Confidence 111222 2223455666542 222 13 433333443 2488999954444322 2222110 011
Q ss_pred ccCCCCCceEEEEecCCCCHHHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------
Q 013679 228 IDMPAGPSEVLVIADIYASPVHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR---------- 293 (438)
Q Consensus 228 ID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r---------- 293 (438)
.. +-|-+= +|-|++||.+..|-.++.-+=. --.|...++... +.. +++.+.+.+.++.+.-
T Consensus 270 lE-LGGk~p--~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~ 344 (515)
T 2d4e_A 270 PE-LGGKSP--ALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEE-KIF-EDFVGKVVERARAIRVGHPLDPETEV 344 (515)
T ss_dssp EE-CCCCCE--EEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEH-HHH-HHHHHHHHHHHHHCCBCCTTSTTCSB
T ss_pred ec-CCCcCe--EEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeh-hHH-HHHHHHHHHHHhhcccCCcccccCcc
Confidence 11 224443 4445678998877776643211 123333333322 343 6666656555544320
Q ss_pred ------------HHHHHHhh--------------------------------------------c-CC---eEEEeCCHH
Q 013679 294 ------------GEFASKAL--------------------------------------------G-HS---FMVFARDML 313 (438)
Q Consensus 294 ------------~~ia~~sl--------------------------------------------~-~g---~ii~v~~l~ 313 (438)
.+.++.+. + .| .|+.++|+|
T Consensus 345 gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~~~~~~i~~eEiFGPVl~v~~~~~~d 424 (515)
T 2d4e_A 345 GPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVGENHMKIAQEEIFGPVLVAIPFKDEE 424 (515)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEECCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeCCCCChhhhccccCCceEEEeeCCHH
Confidence 01111111 0 12 245578999
Q ss_pred HHHHHhhhhcccc-ceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCccccc
Q 013679 314 EGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDS 384 (438)
Q Consensus 314 ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~ 384 (438)
||++++|..--=| ..|.++|.. .+..++ .+|.|++..++.. +.-+|- +|..|+.|..+++.
T Consensus 425 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~V~vN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~ 494 (515)
T 2d4e_A 425 EALRKANDTKYGLAAYVFTRDLERAHRLALEL-EAGMVYLNSHNVR---------HLPTPFGGVKGSGDRREGGTYALDF 494 (515)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHS-CSSEEEESSSCCC---------CTTSCBCCSGGGBCSCBSHHHHHHH
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHhC-CeeEEEECCCCCC---------CCCCCCCCcCCCCCCccchHHHHHH
Confidence 9999999853222 556677754 566776 5999999976431 122444 45567777778888
Q ss_pred ccceeeEE
Q 013679 385 FLKYMTVQ 392 (438)
Q Consensus 385 FlK~~s~~ 392 (438)
|+..-++.
T Consensus 495 ~~~~K~v~ 502 (515)
T 2d4e_A 495 YTDLKTIA 502 (515)
T ss_dssp HEEEEEEE
T ss_pred hCceeEEE
Confidence 98766654
No 34
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=95.54 E-value=2.6 Score=43.45 Aligned_cols=318 Identities=16% Similarity=0.119 Sum_probs=173.4
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE--
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV-- 103 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~-- 103 (438)
.+-.+..+.+.+.++++-|+=..-.++..-+- + .+.+.-+..+++.++.|.+. ..+ |.-
T Consensus 66 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~-~ea~~ev~~~~~~l~~~a~~-~~~-~~~~~ 126 (479)
T 2imp_A 66 IERASWLRKISAGIRERASEISALIVEEGGKI----------------Q-QLAEVEVAFTADYIDYMAEW-ARR-YEGEI 126 (479)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------H-HHHHHHHHHHHHHHHHHHTT-TTT-CCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------H-HHHHHHHHHHHHHHHHHHHH-HHH-hhCCc
Confidence 33344555555566666555444444444211 0 11223366677777766542 222 211
Q ss_pred -Ee-cCceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch-
Q 013679 104 -EN-MKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH- 178 (438)
Q Consensus 104 -~~-~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e- 178 (438)
.. .+|...-.++.|+.-|++..|- -||-. .+...+||-.||+.=| +-|.. .-.... .+....+.+|...
T Consensus 127 ~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~VV--lKps~-~tp~t~~~l~~l~~~aGlP~g 200 (479)
T 2imp_A 127 IQSDRPGENILLFKRALGVTTGILPW---NFPFFLIARKMAPALLTGNTIV--IKPSE-FTPNNAIAFAKIVDEIGLPRG 200 (479)
T ss_dssp ECCSSTTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCEEE--EECCT-TSCHHHHHHHHHHHHHTCCTT
T ss_pred cccCCCCceeEEEEeccceEEEECCC---chHHHHHHHHHHHHHHcCCEEE--EECCc-cchHHHHHHHHHHHHhCCCcC
Confidence 11 2465667788999999999994 45644 3457889999998544 33432 111111 2233455666643
Q ss_pred hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 179 ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 179 Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
++. .| |.+.-.+|. +-|+||+|.==|..-| ++|+.+. .|-.. +-|-+= +|-|++||.+.
T Consensus 201 vv~vv~g~~~~~~~~L~----~~~~v~~V~fTGS~~~g~~i~~~aa~~~~-----~v~lE-lGGk~p--~iV~~dADl~~ 268 (479)
T 2imp_A 201 VFNLVLGRGETVGQELA----GNPKVAMVSMTGSVSAGEKIMATAAKNIT-----KVCLE-LGGKAP--AIVMDDADLEL 268 (479)
T ss_dssp SEEECCSCTTTHHHHHH----HCTTEEEEEEESCHHHHHHHHHHHHTTTC-----EEEEE-CCCCCE--EEECTTSCHHH
T ss_pred eEEEEECCcHHHHHHHH----hCCCcCEEEEeCCHHHHHHHHHHHhccCC-----cEEEE-cCCcCe--EEECCCCCHHH
Confidence 222 23 433334443 2488999974344322 2221110 01111 225553 44466789998
Q ss_pred HHHhhhhccCcCC----CCc-eEEEecCchhhHHHHHHHHHHHHhcCC----C-------------------HHHHHHhh
Q 013679 250 IAADLLSQAEHGP----DSQ-VVLVIVGDGVDLDAIEQEISKQCQSLP----R-------------------GEFASKAL 301 (438)
Q Consensus 250 vAaDLLaQAEHd~----~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~----r-------------------~~ia~~sl 301 (438)
.|-.++.-+=... .+. -++|-.+ .. +++.+.+.+.++.+. . .+.++.+.
T Consensus 269 aa~~i~~~~~~n~GQ~C~a~~rv~V~~~--i~-d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~ 345 (479)
T 2imp_A 269 AVKAIVDSRVINSGQVCNCAERVYVQKG--IY-DQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAV 345 (479)
T ss_dssp HHHHHHTTSSTTTTCCSSSCSEEEEEGG--GH-HHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCcCcCCcEEEEehh--hH-HHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHH
Confidence 8887765443322 222 3444333 43 666666666665542 0 01111111
Q ss_pred c--------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH---H
Q 013679 302 G--------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---K 336 (438)
Q Consensus 302 ~--------------------------------------~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~---~ 336 (438)
+ .| .++-++|+|||++++|..- +--..|.++|.. .
T Consensus 346 ~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~ 425 (479)
T 2imp_A 346 EEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMK 425 (479)
T ss_dssp HTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHH
T ss_pred HCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHH
Confidence 0 01 2344789999999999862 123567788865 4
Q ss_pred HHhhcccccccccCCCCcccccccccCCCCCCC-----CCCccccccCcccccccceeeEEE
Q 013679 337 WESIIENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 337 ~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
+..++ .+|.|++..++.. +.-+| .+|..|+.|..+++.|+..-++..
T Consensus 426 ~~~~l-~~G~v~iN~~~~~---------~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~ 477 (479)
T 2imp_A 426 AIKGL-KFGETYINRENFE---------AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 477 (479)
T ss_dssp HHHHC-CSSEEEESSCCCC---------CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHHhC-CEeEEEECCCCCC---------CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEe
Confidence 66666 5999999975532 22355 456778888888889988877654
No 35
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=95.52 E-value=2.7 Score=43.49 Aligned_cols=255 Identities=16% Similarity=0.122 Sum_probs=141.8
Q ss_pred EEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHcCCch-hhh--c
Q 013679 110 RCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVTH-ILK--A 182 (438)
Q Consensus 110 ~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~Gv~e-Iy~--v 182 (438)
....++.|+.-|++..|- .+|+ ++.+...+||-.||+.=| +-|.. ..|. +......+|+.+ ++. -
T Consensus 132 ~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~VV--lKps~----~tp~t~~~l~~l~~~aGlP~gvv~vv~ 203 (490)
T 3ju8_A 132 TAVLRHKPHGVVAVFGPY-NFPG-HLPNGHIVPALLAGNCVV--FKPSE----LTPKVAELTLKAWIQAGLPAGVLNLVQ 203 (490)
T ss_dssp EEEEEEEECSEEEEECCS-SSTT-HHHHHHHHHHHHHTCEEE--EECCT----TCHHHHHHHHHHHHHTTCCTTTEEECC
T ss_pred eeeEEECCCCEEEEECCC-cchH-HHHHHHHHHHHHcCCeEE--EECCC----CCcHHHHHHHHHHHHhCcCcCeEEEEe
Confidence 344568999999999995 3443 566677889999997544 33432 3343 223455677652 222 3
Q ss_pred chHHHHHHHhhcCCCCCCceEEecCCcHHHHHH-HHHhcCCCCcc-cccCCCCCceEEEEecCCCCHHHHHHhhhhccCc
Q 013679 183 GGAQAISAMAWGTESCPKVEKIFGPGNQYVTAA-KMILQNSEAMI-SIDMPAGPSEVLVIADIYASPVHIAADLLSQAEH 260 (438)
Q Consensus 183 GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A-K~~v~~~~~~V-gID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEH 260 (438)
||...-.+|.- -|+||+|.==|..=|-.. .+..+...-.| ... +-|-+= +|-|++||.+..|..++.-+=.
T Consensus 204 g~~~~~~~L~~----~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lE-lGGk~p--~iV~~dADl~~Aa~~i~~~~~~ 276 (490)
T 3ju8_A 204 GGRETGVALAA----HRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALE-MGGNNP--LVVEEVADLDAAVYTIIQSAFI 276 (490)
T ss_dssp CSHHHHHHHHT----CTTCSEEEEESCHHHHHHHHHHTTTCTTSEEEEE-CCCCEE--EEECCCSCHHHHHHHHHHHHHG
T ss_pred CCHHHHHHHHh----CCCcCEEEEECcHHHHHHHHHHhhccCCCcEEee-cCCCCe--EEECCCCCHHHHHHHHHHHHHh
Confidence 56655555652 588999986666543222 11111100001 111 224443 4456679999888777643322
Q ss_pred C----CCCceEEEecCchhhHHHHHHHHHHHHhcCC-----C------------------HHHHHHhhcCC---------
Q 013679 261 G----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP-----R------------------GEFASKALGHS--------- 304 (438)
Q Consensus 261 d----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~-----r------------------~~ia~~sl~~g--------- 304 (438)
. -.+...++....... +++.+.+.+.++.+. . .+.++.+.+.|
T Consensus 277 n~GQ~C~a~~rvlV~~~~i~-d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~ 355 (490)
T 3ju8_A 277 SAGQRCTCARRLLVPQGAWG-DALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQ 355 (490)
T ss_dssp GGGCSTTSEEEEEEESSHHH-HHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred cCCCCCcCCCEEEEECCccH-HHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 2 233333333333222 555555555554441 0 12333332211
Q ss_pred -------------------------------eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhccccccccc
Q 013679 305 -------------------------------FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFL 349 (438)
Q Consensus 305 -------------------------------~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFl 349 (438)
.++-++|+|||++++|..--=| ..|.++|.. .+..++ .+|.|++
T Consensus 356 ~~~~g~~~~PTvl~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l-~aG~v~v 434 (490)
T 3ju8_A 356 PIDGAALLTPGILDVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVES-RAGIVNW 434 (490)
T ss_dssp CSTTSCCCCCEEEECTTCSSCCCCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHC-CSSEEEE
T ss_pred cCCCCCEEccEEEEeCCCCccccccccccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhc-CcceEEE
Confidence 2345789999999999853332 667788874 455555 5899999
Q ss_pred CCCCcccccccccCCCCCCCCCCccccccCcccccccceee
Q 013679 350 GEWTPESVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMT 390 (438)
Q Consensus 350 G~~sp~a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s 390 (438)
..++. +.++-+|-+|. +.+|--+.+.|+..-+
T Consensus 435 N~~~~--------~~~~~~PfGG~-~~SG~~~~~~~~~~k~ 466 (490)
T 3ju8_A 435 NKQLT--------GAASSAPFGGI-GASGNHRPSAYYAADY 466 (490)
T ss_dssp SSCSS--------CCCTTSEECCC-GGGBSSCCEETTHHHH
T ss_pred CCCcC--------CCCCCCCcCCc-cccchhHHHhhheeEE
Confidence 97654 23455788774 4444445566654433
No 36
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=95.43 E-value=3 Score=43.42 Aligned_cols=321 Identities=16% Similarity=0.127 Sum_probs=174.2
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-Cce
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETS 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~~ 102 (438)
...+-.+..+.+.+.++++.|+=..-.++..-+- +. +.+.-+..+++.++.|.+.-..- .-.
T Consensus 78 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~-ea~~ev~~~~~~~~~~a~~~~~~~g~~ 140 (503)
T 1a4s_A 78 AGIERSRVMLEAARIIRERRDNIAKLEVINNGKT----------------IT-EAEYDIDAAWQCIEYYAGLAPTLSGQH 140 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HH-HHHHHHHHHHHHHHHHHHHGGGCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------HH-HHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 3444556666777777777666554445444221 00 11223566666777665432211 111
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch-h
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH-I 179 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e-I 179 (438)
+...+|...-.++.|+.-|++..|- -||- ..+...+||-.||+. ||+-|.. .-.... .+....+.+|... +
T Consensus 141 ~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGN~--VVlKps~-~tp~ta~~l~~l~~~aGlP~gv 214 (503)
T 1a4s_A 141 IQLPGGAFAYTRREPLGVCAGILAW---NYPFMIAAWKCAPALACGNA--VVFKPSP-MTPVTGVILAEIFHEAGVPVGL 214 (503)
T ss_dssp EECGGGCEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCE--EEEECCT-TSCHHHHHHHHHHHHTTCCTTS
T ss_pred ccCCCCceeEEEEecCceEEEECCC---cchHHHHHHHHHHHHHcCCE--EEEECCC-CChHHHHHHHHHHHHhCCCcCe
Confidence 1222455566788999999999995 4663 345578899999985 3344442 111222 2223455666542 3
Q ss_pred hhc--c-hHHHHHHHhhcCCCCCCceEE--ecCCc----HHHHHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHH
Q 013679 180 LKA--G-GAQAISAMAWGTESCPKVEKI--FGPGN----QYVTAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHI 250 (438)
Q Consensus 180 y~v--G-GAQAIAAlAyGTetIp~VDkI--vGPGN----~yV~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~v 250 (438)
+.+ | | +.-.+|. .-|.||+| +|--. ++-++|+.+- .|-.. +-|-+= +|-|++||.+..
T Consensus 215 v~vv~g~~-~~g~~L~----~~p~v~~V~FTGS~~~G~~i~~~aa~~~~-----~v~lE-LGGk~p--~IV~~dADl~~A 281 (503)
T 1a4s_A 215 VNVVQGGA-ETGSLLC----HHPNVAKVSFTGSVPTGKKVMEMSAKTVK-----HVTLE-LGGKSP--LLIFKDCELENA 281 (503)
T ss_dssp EEECCCSH-HHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHHTTTC-----EEEEE-CCCCCE--EEECTTSCHHHH
T ss_pred EEEEecCc-hHHHHHH----hCCCcCEEEEeCCHHHHHHHHHHhhhcCC-----ceEEe-cCCcCe--EEECCCCCHHHH
Confidence 322 4 5 4444454 24889999 45432 1222332211 01111 234453 444566899888
Q ss_pred HHhhhhccCcC----CCCc-eEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHh---
Q 013679 251 AADLLSQAEHG----PDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKA--- 300 (438)
Q Consensus 251 AaDLLaQAEHd----~~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~s--- 300 (438)
|-.++.-+=.. -.+. -+||-.+ .. ++..+.+.+.++.+.- .+.++.+
T Consensus 282 a~~i~~~~~~n~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~ 358 (503)
T 1a4s_A 282 VRGALMANFLTQGQVCTNGTRVFVQRE--IM-PQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKE 358 (503)
T ss_dssp HHHHHHTTCGGGGCCTTCCCEEEEEGG--GH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcCCcEEEEehH--HH-HHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHC
Confidence 77766533222 2222 3444333 43 6666666655554420 0111111
Q ss_pred --------------------------------------h--c-CC---eEEEeCCHHHHHHHhhhhcc-ccceecccChH
Q 013679 301 --------------------------------------L--G-HS---FMVFARDMLEGISFSNLYAP-EHLIVNVKDAE 335 (438)
Q Consensus 301 --------------------------------------l--~-~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~p~ 335 (438)
+ + .| .++-++|+|||++++|..-- --..|.++|..
T Consensus 359 Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 438 (503)
T 1a4s_A 359 GARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDIS 438 (503)
T ss_dssp TCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHH
T ss_pred CCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHH
Confidence 1 0 12 24557899999999998532 23567788874
Q ss_pred ---HHHhhcccccccccCCCCcccccccccCCCCCCC-----CCCccccccCcccccccceeeEEE
Q 013679 336 ---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 336 ---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
.+..++ .+|.|++..++.. +..+| .+|..|..|..+++.|+..-++..
T Consensus 439 ~a~~~~~~l-~aG~V~vN~~~~~---------~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~ 494 (503)
T 1a4s_A 439 RAHRVAANL-EAGTCYINTYSIS---------PVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIV 494 (503)
T ss_dssp HHHHHHHHS-CSSEEEESCCCCC---------CTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEE
T ss_pred HHHHHHHHC-ceeEEEECCCCCC---------CCCCCCCCcCCCCCCccchHHHHHHhcCceEEEE
Confidence 466676 5999999976541 12245 446678888888999998877654
No 37
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=95.35 E-value=2.5 Score=44.08 Aligned_cols=318 Identities=15% Similarity=0.151 Sum_probs=162.2
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHH-HHHHHHHHHHHHHHHhccCCCce
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVK-EAFDVAYNNIYAFHLAQKSAETS 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~-~ai~~A~~nI~~fh~~q~~~~~~ 102 (438)
...+-.+..+++-+.++++.|+=..-.++..-+. + .+.+ .-+..+++.++.|.+......+.
T Consensus 83 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~-------------~~a~~~ev~~~~~~~~~~a~~~~~~~~~ 145 (497)
T 3i44_A 83 SPHERLGFVEKILEIYEKRSSDMAKTISMEMGAP----I-------------DMALNAQTATGSSHIRNFIKAYKEFSFQ 145 (497)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----H-------------HHHHHTHHHHHHHHHHHHHHHHHHCCSE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----H-------------HHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 3444455666777777777776555555544321 0 1111 12445555565554432221222
Q ss_pred EEecCceEEEEE-EEecceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCch-
Q 013679 103 VENMKGVRCKRV-ARSIGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH- 178 (438)
Q Consensus 103 ~~~~~Gv~~g~r-~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~e- 178 (438)
....+|...-.+ +.|+.-|++..|- -||- ..+.-.+||-.||+.=| +-|.. .-..... +......+|+..
T Consensus 146 ~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGN~VV--lKps~-~tp~t~~~l~~l~~eaGlP~g 219 (497)
T 3i44_A 146 EALIEGNEQAILHYDAIGVVGLITPW---NWPMNQVTLKVIPALLAGCTMV--LKPSE-IAPLSAMLFAEILDEAALPSG 219 (497)
T ss_dssp EESSTTCSSCEEEEEECCEEEEECCS---SSHHHHHHHHHHHHHHHTCEEE--EECCT-TSCHHHHHHHHHHHHTTCCTT
T ss_pred ccccCCceeEEEeecCceEEEEECCC---cchHHHHHHHHHHHHHcCCEEE--EECCc-ccHHHHHHHHHHHHHhCcCCC
Confidence 221123323344 8999999999995 4663 44456789999997644 34432 1111122 223455666542
Q ss_pred ---hhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 179 ---ILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 179 ---Iy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
|..-.|...-.+|.- -|+||+|.=-|..=| ++|+.+.- |-. -+-|-+=++ -|++|| +.
T Consensus 220 vvnvv~g~~~~~g~~L~~----hp~v~~I~FTGS~~~G~~i~~~aa~~~k~-----v~l-ElGGk~p~I--V~~dAD-~~ 286 (497)
T 3i44_A 220 VFNLINGDGANVGSYLSA----HPDLEMISFTGSTRAGKDISKNASNTLKR-----VCL-ELGGKGANI--IFADAD-ID 286 (497)
T ss_dssp SEEECCCCTTTHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHHTTTCE-----EEE-ECCCCCEEE--ECTTSC-TT
T ss_pred eEEEEeCCChHHHHHHHh----CCCcCEEEEeCcHHHHHHHHHHHhhcCCc-----eee-ccCCCCceE--ECCChh-HH
Confidence 222225444455542 588999976664322 22321100 100 122334333 345577 65
Q ss_pred HHHhhhhc----cCcCCCCce-EEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhc
Q 013679 250 IAADLLSQ----AEHGPDSQV-VLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALG 302 (438)
Q Consensus 250 vAaDLLaQ----AEHd~~a~~-vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~ 302 (438)
.|..++.- +=..-.+.. +||-. +.. +++.+.+.+.++.+.- .+.++.+.+
T Consensus 287 Aa~~i~~~~f~n~GQ~C~a~~rvlV~~--~i~-d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~ 363 (497)
T 3i44_A 287 ALQRGVRHCFYNSGQSCNAPTRMLVEQ--AIY-DKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGID 363 (497)
T ss_dssp HHHHHHHHHHGGGGCCTTCCCEEEEEG--GGH-HHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcccCCEEEEcH--HHH-HHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHH
Confidence 55444321 111222333 44432 243 6665555555543310 011221111
Q ss_pred -----------------------------------------CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH--
Q 013679 303 -----------------------------------------HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE-- 335 (438)
Q Consensus 303 -----------------------------------------~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~-- 335 (438)
.| .|+.++|+|||++++|..--=| ..|.++|..
T Consensus 364 ~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a 443 (497)
T 3i44_A 364 EGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKC 443 (497)
T ss_dssp TTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHH
T ss_pred CCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 12 2345789999999999853222 567788864
Q ss_pred -HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeE
Q 013679 336 -KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 336 -~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 391 (438)
.+..+++ +|.|++.. .. .+ .-+|-+ |..|..|..+++.|+..-++
T Consensus 444 ~~~a~~l~-aG~V~iN~-~~-------~~--~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v 494 (497)
T 3i44_A 444 RRIAAQVR-SGMVEVNG-HE-------LP--GGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494 (497)
T ss_dssp HHHHHHSC-CSEEEETT-CC-------CC--TTCCBCCSGGGCCCCBSHHHHHHTTEEEEEE
T ss_pred HHHHHhCC-cCeEEECC-CC-------CC--CCCCcCCcCcCcCCccchHHHHHHhcceeEE
Confidence 5667774 99999993 11 11 224544 45666677778888776554
No 38
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=95.17 E-value=3.7 Score=42.96 Aligned_cols=323 Identities=15% Similarity=0.168 Sum_probs=171.0
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-Cce
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETS 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~~ 102 (438)
...+-.+..+.+-+.++++.|+=..-.++..-+. +.-. ...-+..+++.++.|...-..- .-.
T Consensus 96 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~ea------------~~~Ev~~~~~~~~~~a~~~~~~~g~~ 159 (517)
T 2o2p_A 96 NARDRGRLLYRLADVMEQHQEELATIEALDAGAV----YTLA------------LKTHVGMSIQTFRYFAGWCDKIQGAT 159 (517)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HHHH------------HHTTTHHHHHHHHHHHHHGGGCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC----HHHH------------HHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 3444556667777777777776555555555321 1000 0011344555555554321110 001
Q ss_pred EEe----cCceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCC
Q 013679 103 VEN----MKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGV 176 (438)
Q Consensus 103 ~~~----~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv 176 (438)
+.. .++...-.++.|+.-|++..|-- ||-.+ +.-.+||-.||+.=|+= |.. .-.... .+......+|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN---~P~~~~~~~~a~ALaaGNtVVlK--ps~-~tp~ta~~l~~l~~eaGl 233 (517)
T 2o2p_A 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWN---YPLMMLSWKTAACLAAGNTVVIK--PAQ-VTPLTALKFAELTLKAGI 233 (517)
T ss_dssp ECCCCCTTSCEEEEEEEEECCEEEEECCSS---SHHHHHHHHHHHHHHTTCEEEEE--CCT-TCCHHHHHHHHHHHHTTC
T ss_pred ccccccCCCCceEEEEecCCccEEEECCCc---chHHHHHHHHHHHHHcCCEEEEE--CCC-ccHHHHHHHHHHHHHhCC
Confidence 111 23435567789999999999953 56444 45677999999864443 432 111122 22334556665
Q ss_pred ch-hhh--cc-hHHHHHHHhhcCCCCCCceEE--ecCCcH----HHHHH-HHHhcCCCCcccccCCCCCceEEEEecCCC
Q 013679 177 TH-ILK--AG-GAQAISAMAWGTESCPKVEKI--FGPGNQ----YVTAA-KMILQNSEAMISIDMPAGPSEVLVIADIYA 245 (438)
Q Consensus 177 ~e-Iy~--vG-GAQAIAAlAyGTetIp~VDkI--vGPGN~----yV~~A-K~~v~~~~~~VgID~~AGPSEvlIiAD~~A 245 (438)
.. ++. .| |...-.+|. .-|+||+| +|--.. +-++| +.+- . |-.. +-|-+=+ |-+++|
T Consensus 234 P~gvv~vv~g~g~~~g~~L~----~~~~v~~V~FTGS~~~G~~I~~~aa~~~lk-~----v~lE-LGGk~p~--IV~~dA 301 (517)
T 2o2p_A 234 PKGVVNILPGSGSLVGQRLS----DHPDVRKIGFTGSTEVGKHIMKSCALSNVK-K----VSLE-LGGKSPL--IIFADC 301 (517)
T ss_dssp CTTSEEECCSCHHHHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHHHHTCC-E----EEEE-CCCCEEE--EECTTS
T ss_pred CcCeEEEEeCCCHHHHHHHH----hCCCCCEEEEECCHHHHHHHHHHhHHhcCC-e----EEEE-CCCcCeE--EECCCC
Confidence 42 222 24 655555554 24889999 554322 22333 2111 0 1111 2255543 444568
Q ss_pred CHHHHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHH
Q 013679 246 SPVHIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASK 299 (438)
Q Consensus 246 np~~vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~ 299 (438)
|.+..|-.++.-+ =.--.+...++... +.. +++.+.+.+.++.+.- ...++.
T Consensus 302 Dl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~-~i~-d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~ 379 (517)
T 2o2p_A 302 DLNKAVQMGMSSVFFNKGENCIAAGRLFVEE-SIH-NQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQR 379 (517)
T ss_dssp CHHHHHHHHHHHHHGGGGCCTTCEEEEEEEH-HHH-HHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCcCCeEEEEeH-HHH-HHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHH
Confidence 9988777665422 11233444444332 243 6666666666655420 112222
Q ss_pred hhcC--------------------------------------C---eEEEeCC--HHHHHHHhhhhc-cccceecccChH
Q 013679 300 ALGH--------------------------------------S---FMVFARD--MLEGISFSNLYA-PEHLIVNVKDAE 335 (438)
Q Consensus 300 sl~~--------------------------------------g---~ii~v~~--l~ea~~~~N~~A-PEHLel~~~~p~ 335 (438)
+.+. | .++-++| +|||++++|..- +=-..|.++|..
T Consensus 380 a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~ 459 (517)
T 2o2p_A 380 GVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDIN 459 (517)
T ss_dssp HHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHH
T ss_pred HHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHH
Confidence 2111 1 2344788 999999999852 123567788864
Q ss_pred ---HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEE
Q 013679 336 ---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 336 ---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 392 (438)
.+..++ .+|.|++..+... +.-+|-+ |..|..|..+++.|+..-++.
T Consensus 460 ~a~~~~~~l-~aG~V~iN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~ 514 (517)
T 2o2p_A 460 KALYVSDKL-QAGTVFINTYNKT---------DVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVT 514 (517)
T ss_dssp HHHHHHHHC-CSSEEEESCSSCC---------CTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHhc-CEeEEEECCCCCC---------CCCCCcCCcCcCCcCccChHHHHHHhCCceEEE
Confidence 566777 5999999975321 1235544 556666667788888777654
No 39
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=95.06 E-value=1.1 Score=50.95 Aligned_cols=285 Identities=18% Similarity=0.174 Sum_probs=160.5
Q ss_pred HHHHHHHHHHHHHHHHhccC---CCceEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEe
Q 013679 79 KEAFDVAYNNIYAFHLAQKS---AETSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLA 154 (438)
Q Consensus 79 ~~ai~~A~~nI~~fh~~q~~---~~~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~ 154 (438)
+.-+..+++.++.|...-.+ .........|.....++.|+.-|++..|- -|| ...+..++||-.||+. ||+
T Consensus 608 ~~Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~Pw---NfPl~i~~~~va~ALAAGNt--VVl 682 (1001)
T 3haz_A 608 LSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPW---NFPLAIFLGQVTAALMAGNS--VVA 682 (1001)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCS---SSTTHHHHHHHHHHHHTTCE--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCC---CChHHHHHHHHHHHHHcCCE--EEE
Confidence 34466777777777653221 11112234566777889999999999994 355 4455677899999974 444
Q ss_pred cCCCCCCCCCHHH----HHHHHHcCCch----hhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhc
Q 013679 155 TPPSQDGSICKEV----LYCAKKAGVTH----ILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQ 220 (438)
Q Consensus 155 TPP~~~G~i~p~i----L~AA~l~Gv~e----Iy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~ 220 (438)
-|.. ..|.+ ....+.+|+.+ +..-.|.. -.+|. +-|.||+|.==|..=|. +|++. +
T Consensus 683 KPse----~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~-g~~L~----~~p~Vd~V~FTGSt~vGr~I~~~aA~~~-~ 752 (1001)
T 3haz_A 683 KPAE----QTPRIAREAVALLHEAGIPKSALYLVTGDGRI-GAALT----AHPDIAGVVFTGSTEVARSINRALAAKD-G 752 (1001)
T ss_dssp ECCT----TCHHHHHHHHHHHHHHTCCTTTEEECCCCHHH-HHHHH----HCTTCCEEEEESCHHHHHHHHHHHHHSS-S
T ss_pred ecch----hhHHHHHHHHHHHHHhCcCcCcEEEEecCchH-HHHHH----hCCCcCEEEecCCHHHHHHHHHHHhccc-C
Confidence 4542 34432 22344556542 22222444 34443 24889999877765442 23210 0
Q ss_pred CCCCcccccCCCCCceEEEEecCCCCHHHHHHhhhhccCcC----CCCceEEEecCchhhHHHHHHHHHHHHhcCC----
Q 013679 221 NSEAMISIDMPAGPSEVLVIADIYASPVHIAADLLSQAEHG----PDSQVVLVIVGDGVDLDAIEQEISKQCQSLP---- 292 (438)
Q Consensus 221 ~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAEHd----~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~---- 292 (438)
. ..--+=-+-|-+ -+|-|++||++.++.+++.-+=.. -.|...|+. .++.. +++.+.+.+.++.+.
T Consensus 753 ~--l~pv~lElGGkn--p~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV-~e~i~-d~f~~~L~~~~~~l~vGdp 826 (1001)
T 3haz_A 753 P--IVPLIAETGGIN--AMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFV-QEDVA-DRMIEMVAGAARELKIGDP 826 (1001)
T ss_dssp C--CCCEEEECCCCE--EEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEE-EHHHH-HHHHHHHHHHHHTCCBSCT
T ss_pred C--CceEEeecCCcc--eEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeec-cHHHH-HHHHHHHHHHHHhcCCCCc
Confidence 0 000011123333 245588899999998887543222 234444444 34464 888888877777662
Q ss_pred -----------C-------HHHHHHhh------------------------------c---CCe---EEEeCC--HHHHH
Q 013679 293 -----------R-------GEFASKAL------------------------------G---HSF---MVFARD--MLEGI 316 (438)
Q Consensus 293 -----------r-------~~ia~~sl------------------------------~---~g~---ii~v~~--l~ea~ 316 (438)
. ...+..+. . .|- |+-++| +|||+
T Consensus 827 ~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v~gg~~~~~G~fv~PTvl~~~~~~~~~eEiFGPVL~V~~~~~~~ldeAI 906 (1001)
T 3haz_A 827 SDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPEGCFVAPHIFELTEAGQLTEEVFGPILHVVRYRPENLERVL 906 (1001)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEEECCCCSSSCCCCEEEECSSGGGCCSCCCSSEEEEEEECGGGHHHHH
T ss_pred ccccCccCCCCCHHHHHHHHHHHHHHHhcCeEeccccCCCCcEEeeEEecCCCHHHHhccccCcEEEEEEeCCCCHHHHH
Confidence 0 11222211 1 121 333564 89999
Q ss_pred HHhhhhcccc-ceecccChH---HHHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccc-cCccccccc
Q 013679 317 SFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMY-GGVSLDSFL 386 (438)
Q Consensus 317 ~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~-sgLsv~~Fl 386 (438)
+++|..--=| ..|.++|.. .+..++ .+|.|++..++.-.. +..+|- +|+.+.. |..++..|+
T Consensus 907 ~~aN~t~yGLta~V~T~d~~~a~~~a~~l-~aG~V~VN~~~~~~~-------~~~~PFGG~k~SG~G~~~gG~~gl~~ft 978 (1001)
T 3haz_A 907 RAIERTGYGLTLGVHSRIDDSIEAIIDRV-QVGNIYVNRNMIGAV-------VGVQPFGGNGLSGTGPKAGGPHYLARFA 978 (1001)
T ss_dssp HHHHHTCCCSEEEEECSCHHHHHHHHHHC-CCSEEEESSCSCCCC-------TTTSCBCCCGGGBCCCCBTSTTSGGGGE
T ss_pred HHHHcCCCCceEEEEcCCHHHHHHHHHhC-CeeeEEEeCCCcCCC-------CCCCCCCCcccCcCCCCCCCHHHHHHhc
Confidence 9999865444 677888875 455565 599999998653221 112343 3555443 446778887
Q ss_pred ceeeEE
Q 013679 387 KYMTVQ 392 (438)
Q Consensus 387 K~~s~~ 392 (438)
..-++.
T Consensus 979 ~~K~v~ 984 (1001)
T 3haz_A 979 TEQTVT 984 (1001)
T ss_dssp EEEEEE
T ss_pred eeeEEE
Confidence 766654
No 40
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=95.05 E-value=3.7 Score=42.34 Aligned_cols=326 Identities=14% Similarity=0.144 Sum_probs=174.2
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCce
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETS 102 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~ 102 (438)
....+-.+..+.+-+.++++.|+=..-.++.+-+...+. +. .|+ . ...+-++.++++++++...+.....
T Consensus 37 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~--~ev-----~-~~~~~~~~~~~~~~~~~~~~~~~~~- 106 (469)
T 3sza_A 37 RPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNA-YY--EEV-----V-YVLEEIEYMIQKLPEWAADEPVEKT- 106 (469)
T ss_dssp CSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HH--TTH-----H-HHHHHHHHHHHHHHHHHSCEECCCC-
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HH--HHH-----H-HHHHHHHHHHHHHHhhhcccccCcc-
Confidence 344455566777778888888876666666665321000 00 111 1 2344566777777777643322211
Q ss_pred EEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHHHH------c
Q 013679 103 VENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKK------A 174 (438)
Q Consensus 103 ~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA~l------~ 174 (438)
.. ..+-..-.++.|+.-|++..|- -|| ...+.-.+||-.||+.=| +-|.. ..|.+- .-+.+ .
T Consensus 107 ~~-~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~~~ALaaGN~vV--lKps~----~tp~t~~~l~~l~~~alP~ 176 (469)
T 3sza_A 107 PQ-TQQDELYIHSEPLGVVLVIGTW---NYPFNLTIQPMVGAIAAGNAVV--LKPSE----LSENMASLLATIIPQYLDK 176 (469)
T ss_dssp GG-GTTSEEEEEEEECSEEEEECCS---SSTTHHHHHHHHHHHHTTCEEE--EECCT----TSHHHHHHHHHHHHHHSCT
T ss_pred cc-CCCccceeeccCCCEEEEECCC---cchHHHHHHHHHHHHHcCCEEE--EECCC----CChHHHHHHHHHHHHhCCc
Confidence 11 1233455678999999999995 355 445566789999997544 44542 344322 11222 1
Q ss_pred CCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHH
Q 013679 175 GVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPV 248 (438)
Q Consensus 175 Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~ 248 (438)
|+=.|.. ||...+.+|.- .+||+|.==|..=| ++|+.+. . |-.. +-|-|=+ |-|++||.+
T Consensus 177 gvv~vv~-g~~~~~~~ll~-----~~vd~I~FTGS~~vG~~i~~~aa~~lk-p----v~lE-LGGk~p~--iV~~dADl~ 242 (469)
T 3sza_A 177 DLYPVIN-GGVPETTELLK-----ERFDHILYTGSTGVGKIIMTAAAKHLT-P----VTLE-LGGKSPC--YVDKNCDLD 242 (469)
T ss_dssp TTSCBCC-CSHHHHHHHTT-----SCCSEEEEESCHHHHHHHHHHHHTTTC-C----EEEE-CCCCCEE--EECTTSCHH
T ss_pred ceEEEEE-CCHHHHHHHHh-----cCCCEEEEECCHHHHHHHHHHHhhccC-c----eEEe-cCCCCce--EECCCCCHH
Confidence 3323322 55555566541 26999876665322 2332211 0 1111 1244433 445679998
Q ss_pred HHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcC---CC-----------H---HHHHHh-------
Q 013679 249 HIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSL---PR-----------G---EFASKA------- 300 (438)
Q Consensus 249 ~vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l---~r-----------~---~ia~~s------- 300 (438)
..|..++.-+ =.--.+...++.. ++.. +++.+.+.+.++.+ |. + +-+.+-
T Consensus 243 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~-~~i~-d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~i~ga~v~ 320 (469)
T 3sza_A 243 VACRRIAWGKFMNSGQTCVAPDYILCD-PSIQ-NQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVA 320 (469)
T ss_dssp HHHHHHHHHHHGGGGCCTTSCCEEEEC-GGGH-HHHHHHHHHHHHHHHCSCGGGCTTCCCCSCHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHhcCCCCCCCCcEEEEe-hhHH-HHHHHHHHHHHHHhcCCCCcccCcccccCCHHHHHHHHHHHcCCEEE
Confidence 8776665322 1112333333333 2232 55555444444321 10 0 101100
Q ss_pred --------------------------hc---CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH---HHHhhcccc
Q 013679 301 --------------------------LG---HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---KWESIIENA 344 (438)
Q Consensus 301 --------------------------l~---~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~---~~l~~i~nA 344 (438)
+. .| .|+-++|+|||++++|..- +=-..|.++|.. .+..+++ +
T Consensus 321 ~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~-~ 399 (469)
T 3sza_A 321 YGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETS-S 399 (469)
T ss_dssp ECCCEETTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCC-C
T ss_pred eCCccCCCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCC-c
Confidence 11 13 2455799999999999853 223667788865 4566664 8
Q ss_pred cccccCCCCcc------cccccccCCCCCCCCCCccccccCcccccccceeeEEE
Q 013679 345 GSVFLGEWTPE------SVGDYASGTNHVLPTYGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 345 GaiFlG~~sp~------a~GDY~aGpNHvLPT~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
|.|++..++.- +||-+ -.+|..|+.|.-+++.|+..-++..
T Consensus 400 G~V~vN~~~~~~~~~~~PfGG~--------k~SG~Gr~~G~~g~~~ft~~K~v~~ 446 (469)
T 3sza_A 400 GGVAANDVIVHITLHSLPFGGV--------GNSGMGSYHGKKSFETFSHRRSCLV 446 (469)
T ss_dssp SEEEESCSSGGGSCTTSCBCCC--------GGGEECCBSTHHHHHHTEEEEEEEE
T ss_pred ceEEEeCCCCCCCCCCCCcCCc--------cccccCccchHHHHHHhhCeeEEEE
Confidence 99999976421 33333 1346678888888889988777654
No 41
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=94.53 E-value=5.3 Score=41.67 Aligned_cols=326 Identities=19% Similarity=0.121 Sum_probs=175.9
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCc-e
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAET-S 102 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~-~ 102 (438)
...+-.+..+.+-+.++++.|+=..-.++..-+.. .+.+.-+..+++.++.|.+.-..-.. .
T Consensus 69 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~ea~~ev~~~~~~l~~~a~~~~~~~~~~ 131 (506)
T 3rh9_A 69 PIETRRKWLEDIRDGLKENREEIGRILCMEHGKPW-----------------KEAQGEVDYAAGFFDYCAKHISALDSHT 131 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH-----------------HHHHHHHHHHHHHHHHHHHHGGGGCCEE
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 34455566777777777777766655555554311 11222355666667666543221100 1
Q ss_pred EEecCceEEEEEE-EecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHHHHcCCch-
Q 013679 103 VENMKGVRCKRVA-RSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCAKKAGVTH- 178 (438)
Q Consensus 103 ~~~~~Gv~~g~r~-~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA~l~Gv~e- 178 (438)
....+|...-.++ .|+.-|++..|- -|| ...+.-++||-.||+.=|+= |.. .-......| .....+|+..
T Consensus 132 ~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~VVlK--ps~-~tp~t~~~l~~l~~eaGlP~g 205 (506)
T 3rh9_A 132 IPEKPKDCTWTVHYRPVGVTGLIVPW---NFPIGMIAKKLSAALAAGCPSVIK--PAS-ETPLTMIAFFSVMDKLDLPDG 205 (506)
T ss_dssp CSCCGGGCEEEEEEEECCSEEEECCS---SSTTHHHHHHHHHHHHHTCCEEEE--CCT-TSCHHHHHHHHHHTTTTCCTT
T ss_pred cccCCCceeeEeecccceEEEEECCC---chHHHHHHHHHHHHHHcCCEEEEE--cCC-ccHHHHHHHHHHHHHhCcChh
Confidence 1111344444555 999999999994 355 34446688999999865543 431 111111122 2344455542
Q ss_pred hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHH---HHHhcCCCCcccccCCCCCceEEEEecCCCC
Q 013679 179 ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAA---KMILQNSEAMISIDMPAGPSEVLVIADIYAS 246 (438)
Q Consensus 179 Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~A---K~~v~~~~~~VgID~~AGPSEvlIiAD~~An 246 (438)
++. -| |...-.+|.- -|.||+|.==|..=| ++| |++... +-|-+= +|-|++||
T Consensus 206 vv~vv~g~~~~~g~~L~~----~p~vd~I~FTGS~~vG~~i~~~aa~~l~~v~lE---------lGGk~p--~iV~~dAD 270 (506)
T 3rh9_A 206 MVNLVMGKASVIGKVLCE----HKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALE---------LGGNAP--FIVFDDAD 270 (506)
T ss_dssp SEEECCSCHHHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHTTTTTCEEEEE---------CCCCCE--EEECTTSC
T ss_pred hEEEEeCCChHHHHHHHh----CCCCCEEEEECCHHHHHHHHHHhhhcCCceEEe---------cCCCCc--eEECCCCC
Confidence 322 24 6655556653 578999975555432 111 221111 123333 44456789
Q ss_pred HHHHHHhhhhccCc----CCCCc-eEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHH
Q 013679 247 PVHIAADLLSQAEH----GPDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASK 299 (438)
Q Consensus 247 p~~vAaDLLaQAEH----d~~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~ 299 (438)
.+..|-.++.-+=. --.|. -+||-.+ .. +++.+.+.+.++.+. . .+.++.
T Consensus 271 l~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~ 347 (506)
T 3rh9_A 271 LEAAADNLIANKFRGGGQTCVCANRIFVHEK--VA-DAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQD 347 (506)
T ss_dssp HHHHHHHHHHHHHGGGGCSSSSCCEEEEETT--TH-HHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcccCcEEEEcHH--HH-HHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHH
Confidence 98877766542211 12233 3444333 43 666666665555541 0 011111
Q ss_pred hh--------------------------------------c-CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH-
Q 013679 300 AL--------------------------------------G-HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE- 335 (438)
Q Consensus 300 sl--------------------------------------~-~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~- 335 (438)
+. + .| .|+.++|+|||++++|..--=| ..|.++|..
T Consensus 348 a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~ 427 (506)
T 3rh9_A 348 ALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAER 427 (506)
T ss_dssp HHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHH
T ss_pred HHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHH
Confidence 11 1 12 2455789999999999854333 567788874
Q ss_pred --HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeEEEeCHHHHH
Q 013679 336 --KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQSLTEEGLK 400 (438)
Q Consensus 336 --~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~~~s~~~~~ 400 (438)
.+..++ .+|.|++..++.. +..+|-+ |..|+.|..+++.|+..-++..-....+.
T Consensus 428 a~~~~~~l-~aG~V~vN~~~~~---------~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~~~~~~ 489 (506)
T 3rh9_A 428 AQRVAAGL-RFGHVGWNTGTGP---------TPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFAENLY 489 (506)
T ss_dssp HHHHHHHC-CCSEEEESCCCCC---------CTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC------
T ss_pred HHHHHHhC-CcceEEEcCCCCC---------CCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcCcccee
Confidence 566777 4899999986541 1235655 45677777889999887776644444433
No 42
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=94.41 E-value=3.6 Score=46.96 Aligned_cols=261 Identities=16% Similarity=0.169 Sum_probs=146.6
Q ss_pred cCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHcCCch-h
Q 013679 106 MKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVTH-I 179 (438)
Q Consensus 106 ~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~Gv~e-I 179 (438)
.+|...-.+++|+.-|++..|- -|| ...+..+.||-.||+. ||+=|.. -.|. +....+.+|+.. +
T Consensus 655 ~~g~~~~~~~~PlGVV~~I~Pw---NfPl~i~~~~~a~ALaaGNt--VVlKPse----~tplsa~~l~ell~eAGlP~gv 725 (1026)
T 4f9i_A 655 APGELNHYFYEPKGVAAVIAPW---NFPLAISMGMASAAIVTGNC--VVFKPSG----ITSIIGWHLVELFREAGLPEGV 725 (1026)
T ss_dssp CTTEEEEEEEEECSEEEEECCS---SSTTHHHHHHHHHHHHTTCE--EEEECCG----GGHHHHHHHHHHHHHTTCCTTS
T ss_pred CCCccceeEeecCceEEEeCCC---ccHHHHHHHHHHHHHHcCCE--EEEEcCc----cchHHHHHHHHHHHHhCcCCCe
Confidence 4577777889999999999994 354 4445667899999965 4444542 2332 233556677653 3
Q ss_pred hh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcC--CCC-----cc-cccCCCCCceEEEEecCCCCHH
Q 013679 180 LK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQN--SEA-----MI-SIDMPAGPSEVLVIADIYASPV 248 (438)
Q Consensus 180 y~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~--~~~-----~V-gID~~AGPSEvlIiAD~~Anp~ 248 (438)
+. -| |...-.+|. +-|.||+|.==|..=|. |++... ... .. -+==+-|-+ -+|.|++||++
T Consensus 726 vnvV~G~g~~vg~~L~----~hp~v~~V~FTGSt~vg--~~I~~~aa~~~~~~~~lkpv~lElGGkn--p~IV~~dADld 797 (1026)
T 4f9i_A 726 FNFTPGRGSVMGDYLV----DHPDISLIAFTGSMETG--LRIIERAAKVHPGQANVKKIISEMGGKN--AIIIDDDADLD 797 (1026)
T ss_dssp EEECCCCHHHHHHHHH----HCTTEEEEEEESCHHHH--HHHHHHHTSCCTTCCSCCEEEEECCCCE--EEEECTTCCHH
T ss_pred EEEEecCcHHHHHHHH----hCCCCCEEEeCCCHHHH--HHHHHHhhcccccccCccceEEecCCCC--eEEECCCCCHH
Confidence 32 24 554444554 25889999666654332 221110 000 00 000011222 35668889999
Q ss_pred HHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHHHHHh--
Q 013679 249 HIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEFASKA-- 300 (438)
Q Consensus 249 ~vAaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~ia~~s-- 300 (438)
.++.+++.-+=. --.|...|+.. +++. +++.+.+.+.++.+. . ...++.+
T Consensus 798 ~Aa~~iv~saf~~aGQ~C~A~~rl~V~-~~i~-d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~ 875 (1026)
T 4f9i_A 798 EAVPHVLYSAFGFQGQKCSACSRVIVL-DAVY-DKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKR 875 (1026)
T ss_dssp HHHHHHHHHHHGGGGCSTTCEEEEEEE-GGGH-HHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCceEEec-HHHH-HHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHh
Confidence 999888754322 12344444443 3354 777777776666552 0 0111111
Q ss_pred --------------------------------hc---CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHH
Q 013679 301 --------------------------------LG---HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWE 338 (438)
Q Consensus 301 --------------------------------l~---~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l 338 (438)
+. .| .|+.++|+|||++++|..--=| ..|.++|.. .+.
T Consensus 876 ~G~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~ 955 (1026)
T 4f9i_A 876 EGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKAR 955 (1026)
T ss_dssp HSEEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHH
T ss_pred CCeEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHH
Confidence 11 12 2455789999999999853222 457777864 456
Q ss_pred hhcccccccccCCCCcccccccccCCCCCCCCC-----Ccccc-ccCcccccccceeeEEE
Q 013679 339 SIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARM-YGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 339 ~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~-~sgLsv~~FlK~~s~~~ 393 (438)
.+++ +|.|++...+.-+. ...+|=+ |+.+. -|..++..|+..-++..
T Consensus 956 ~~l~-aG~v~IN~~~~~~~-------~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~ 1008 (1026)
T 4f9i_A 956 REFR-VGNLYINRNNTGAL-------VERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTE 1008 (1026)
T ss_dssp HHSC-CSEEEESSCSCCCC-------TTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEE
T ss_pred HhCC-EeeEEEcCCCCCCC-------CCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEE
Confidence 6665 99999998654322 1234444 44433 34456788887766543
No 43
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=94.19 E-value=5.8 Score=40.77 Aligned_cols=318 Identities=22% Similarity=0.217 Sum_probs=156.9
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceEEe
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSVEN 105 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~~~ 105 (438)
.+-.+..+.+-+.++++.|+=..-.++...+.. ......-+..+++.++.|.+.-..-.....
T Consensus 67 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----------------~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~- 129 (478)
T 3ty7_A 67 KERQALLDKIVKEYENRKDDIVQAITDELGAPL----------------SLSERVHYQMGLNHFVAARDALDNYEFEER- 129 (478)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH----------------HHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----------------HHHhHHHHHHHHHHHHHHHHHHHHhhcccC-
Confidence 344455566666666666655544555444310 111122245556666655432211111111
Q ss_pred cCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHHHHHHHHHcCCch-hhhc--
Q 013679 106 MKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKEVLYCAKKAGVTH-ILKA-- 182 (438)
Q Consensus 106 ~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL~AA~l~Gv~e-Iy~v-- 182 (438)
++ ..-.++.|+.-|++..|- .+|+ ...+.-.+||-.||+.=|+=.+|-.+ ..+-.+....+.+|+.+ ++.+
T Consensus 130 -~~-~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~VVlKps~~tp--~t~~~l~~~~~~aGlP~gvv~vv~ 203 (478)
T 3ty7_A 130 -RG-DDLVVKEAIGVSGLITPW-NFPT-NQTSLKLAAAFAAGSPVVLKPSEETP--FAAVILAEIFDKVGVPKGVFNLVN 203 (478)
T ss_dssp -ET-TEEEEEEECCCEEEECCS-SSTT-HHHHHHHHHHHHHTCCEEEECCTTSC--HHHHHHHHHHHHHTCCTTTEEECC
T ss_pred -Cc-cceEEecCceEEEEECCC-cchH-HHHHHHHHHHHHcCCeEEEECCCcch--HHHHHHHHHHHHhCcCcCeEEEEE
Confidence 12 234568899999999995 3333 23445678999999876654333111 01112223445566542 2211
Q ss_pred c-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHHHHHhhh
Q 013679 183 G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVHIAADLL 255 (438)
Q Consensus 183 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaDLL 255 (438)
| |...-.+|. .-|+||+|.=-|..=| ++|+.+- .|-.. +-|-+= +|-|++||.+..|..++
T Consensus 204 g~~~~~~~~L~----~~~~v~~v~fTGS~~~G~~i~~~aa~~~~-----~v~lE-lGGk~p--~iV~~dADl~~Aa~~i~ 271 (478)
T 3ty7_A 204 GDGAGVGNPLS----EHPKVRMMSFTGSGPTGSKIMEKAAKDFK-----KVSLE-LGGKSP--YIVLDDVDIKEAAKATT 271 (478)
T ss_dssp CCTTTTHHHHH----HCTTCCEEEECSCHHHHCC--CSTTTTTC-----EEECC-CCCCCE--EEECTTSCHHHHHHHHH
T ss_pred CCChHHHHHHH----hCCCcCEEEEECcHHHHHHHHHHHHhcCC-----ceEEe-cCCCCC--cccCCCCCHHHHHHHHH
Confidence 2 333333333 2488999875554322 1121110 01111 113333 44566799998877755
Q ss_pred hccCc----CCCCc-eEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhc------
Q 013679 256 SQAEH----GPDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALG------ 302 (438)
Q Consensus 256 aQAEH----d~~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~------ 302 (438)
.-+=. --.+. -+||-.+ .. +++.+.+.+.++.+.- .+.+..+.+
T Consensus 272 ~~~~~~~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~ 348 (478)
T 3ty7_A 272 GKVVNNTGQVCTAGTRVLVPNK--IK-DAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELF 348 (478)
T ss_dssp HHHHGGGGCCTTCCCEEEEETT--TH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHhCCCCccCCCeEEEcHH--HH-HHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 32211 22333 3444433 33 6666666666654410 011111110
Q ss_pred -----------------------------------CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhh
Q 013679 303 -----------------------------------HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESI 340 (438)
Q Consensus 303 -----------------------------------~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~ 340 (438)
.| .++.++|+|||++++|..--=| ..|.++|.. .+..+
T Consensus 349 ~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~ 428 (478)
T 3ty7_A 349 YGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARS 428 (478)
T ss_dssp ECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHH
T ss_pred ecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHh
Confidence 12 2355789999999999854333 567788875 46666
Q ss_pred cccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 341 IENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 341 i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
+ .+|.|++.. ++ .++-+|- +|..|..|..+++.|++.-++.
T Consensus 429 l-~~G~v~vN~-~~---------~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~ 474 (478)
T 3ty7_A 429 I-EAGTVEINE-AG---------RKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474 (478)
T ss_dssp S-CSSEEEETT-CC-------------------------------CCGGGEEEEEEE
T ss_pred C-CcCeEEECC-CC---------CCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence 6 489999997 22 1223454 4567888888999999887765
No 44
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=94.05 E-value=6.5 Score=40.80 Aligned_cols=322 Identities=17% Similarity=0.163 Sum_probs=173.7
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC--C
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA--E 100 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~--~ 100 (438)
....+-.+..+.+-+.++++.|+=..-.++..-+- + .+....-+..+++.++.|.+. ..+ .
T Consensus 67 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~------------~ea~~~Ev~~~~~~~~~~a~~-~~~~~g 129 (495)
T 3b4w_A 67 TPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQP----P------------TIIETMHWMGSMGAMNYFAGA-ADKVTW 129 (495)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----H------------HHHHHTTTHHHHHHHHHHHTC-GGGSCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----H------------HHHHHHHHHHHHHHHHHHHHH-HHHhcC
Confidence 33445556677777777777776555555555321 0 001101144455666655432 211 1
Q ss_pred ceEEecCceEEEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHH-HHHHHHHcCCch
Q 013679 101 TSVENMKGVRCKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKE-VLYCAKKAGVTH 178 (438)
Q Consensus 101 ~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~-iL~AA~l~Gv~e 178 (438)
-.+....+...-.++.|+.-|++..|-- ||-. .+...+||-.||+.=|+= |.. .-..... +......+|...
T Consensus 130 ~~~~~~~~~~~~~~~~P~GVv~~I~PwN---~P~~~~~~~~~~ALaaGN~VVlK--ps~-~tp~t~~~l~~l~~eaGlP~ 203 (495)
T 3b4w_A 130 TETRTGSYGQSIVSREPVGVVGAIVAWN---VPLFLAVNKIAPALLAGCTIVLK--PAA-ETPLTANALAEVFAEVGLPE 203 (495)
T ss_dssp EEEEEETTEEEEEEEEECCEEEEECCSS---SHHHHHHHHHHHHHHTTCEEEEE--CBT-TSCHHHHHHHHHHHHTTCCT
T ss_pred CcccCCCCceEEEEEccCceEEEECCCc---chHHHHHHHHHHHHHcCCEEEEe--cCC-ccHHHHHHHHHHHHHhCCCc
Confidence 1112223545667889999999999953 6643 345778999999865544 431 1111222 223455666642
Q ss_pred -hhh--cchHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 179 -ILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 179 -Iy~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
++. -||...-.+|. .-|+||+|.==|..=| ++|+.+. . |-.. +-|-+= +|-|++||.+.
T Consensus 204 gvv~vv~g~~~~g~~L~----~~~~v~~I~FTGS~~~G~~i~~~aa~~l~-p----v~lE-LGGk~p--~iV~~dADl~~ 271 (495)
T 3b4w_A 204 GVLSVVPGGIETGQALT----SNPDIDMFTFTGSSAVGREVGRRAAEMLK-P----CTLE-LGGKSA--AIILEDVDLAA 271 (495)
T ss_dssp TSEEECCBSHHHHHHHT----TCTTCCEEEEESCHHHHHHHHHHHHHTTC-C----EEEE-CCCCEE--EEECTTCCHHH
T ss_pred CeEEEEeCCHHHHHHHH----hCCCcCEEEEeCCHHHHHHHHHHhhhcCC-c----eeec-CCCcce--EEECCCCCHHH
Confidence 332 25666666665 3589999973333222 2332211 0 1111 124443 44456789988
Q ss_pred HHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhh--
Q 013679 250 IAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKAL-- 301 (438)
Q Consensus 250 vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl-- 301 (438)
.|-.++.-+ =.--.+...++.... .. +++.+.+.+.++.+.- .+.++.+.
T Consensus 272 Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~-i~-d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~ 349 (495)
T 3b4w_A 272 AIPMMVFSGVMNAGQGCVNQTRILAPRS-RY-DEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEE 349 (495)
T ss_dssp HHHHHHHHHHGGGGCCTTCEEEEEEEGG-GH-HHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhcCCCCCCCCeEEEEccc-HH-HHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhC
Confidence 777665422 112234444443332 32 5565555555544310 01111111
Q ss_pred -------------------------------------c-CC---eEEEeCCHHHHHHHhhhhccc-cceecccChH---H
Q 013679 302 -------------------------------------G-HS---FMVFARDMLEGISFSNLYAPE-HLIVNVKDAE---K 336 (438)
Q Consensus 302 -------------------------------------~-~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~p~---~ 336 (438)
+ .| .++.++|+|||++++|..--= -..|.++|.. .
T Consensus 350 Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~ 429 (495)
T 3b4w_A 350 GARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIK 429 (495)
T ss_dssp TCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHH
T ss_pred CCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHH
Confidence 0 12 234578999999999985322 2667788864 4
Q ss_pred HHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 337 WESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 337 ~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
++.++ .+|.|++..++ . +.-+|- +|..|..|..+++.|+..-++.
T Consensus 430 ~~~~l-~aG~V~iN~~~--~--------~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~ 479 (495)
T 3b4w_A 430 ISQQI-RTGTYGINWYA--F--------DPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVL 479 (495)
T ss_dssp HHHHS-CCSCCEESSCC--C--------CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHhC-CEeEEEECCCC--C--------CCCCCCCCCCCCCcCccchHHHHHHhcceeEEE
Confidence 66676 59999999753 1 122444 4566777777888998777764
No 45
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=94.03 E-value=7 Score=41.10 Aligned_cols=325 Identities=15% Similarity=0.104 Sum_probs=177.7
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--ccCCC
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLA--QKSAE 100 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~--q~~~~ 100 (438)
....+-.+..+.+-+.++++.|+=..-.++..-+.. .+.+.-+..+++.++.|.+. .....
T Consensus 93 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-----------------~ea~~Ev~~~~~~l~~~a~~~~~~~~~ 155 (538)
T 3qan_A 93 VNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPW-----------------KEADADTAEAIDFLEYYARQMIELNRG 155 (538)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-----------------HHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 334455566677777777777765555555444210 11111255555666655443 11111
Q ss_pred ceEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHH----HHHHHHcC
Q 013679 101 TSVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV----LYCAKKAG 175 (438)
Q Consensus 101 ~~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i----L~AA~l~G 175 (438)
......+|...-.++.|+.-|++..|- -|| ...+.-.+||-.||+.=|+ -|.. ..|.+ ......+|
T Consensus 156 ~~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~VVl--Kps~----~tp~ta~~l~~l~~eaG 226 (538)
T 3qan_A 156 KEILSRPGEQNRYFYTPMGVTVTISPW---NFALAIMVGTAVAPIVTGNTVVL--KPAS----TTPVVAAKFVEVLEDAG 226 (538)
T ss_dssp BCCCCCTTEEEEEEEEECCEEEEECCS---TTTTHHHHHHHHHHHHTTCEEEE--ECCT----TSHHHHHHHHHHHHHTT
T ss_pred eeecccCCcceeeecCCCcEEEEECCC---chHHHHHHHHHHHHHHcCCEEEE--ECCC----ccHHHHHHHHHHHHHhC
Confidence 111222466777889999999999995 355 4566778899999975444 3432 34432 22445566
Q ss_pred Cch-hhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHh---cCCC-----C-cccccCCCCCceEEEEec
Q 013679 176 VTH-ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMIL---QNSE-----A-MISIDMPAGPSEVLVIAD 242 (438)
Q Consensus 176 v~e-Iy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v---~~~~-----~-~VgID~~AGPSEvlIiAD 242 (438)
+.. ++.+ | |...-.+|. .-|+||+|.=-|..=|- |++. +..+ . .| +=-+-|-+= +|-|
T Consensus 227 lP~gvv~vv~g~~~~~g~~L~----~~p~v~~I~FTGS~~~G--~~i~~~aa~~~~~~~~lkpv-~lELGGk~p--~IV~ 297 (538)
T 3qan_A 227 LPKGVINYVPGSGAEVGDYLV----DHPKTSLITFTGSKDVG--VRLYERAAVVRPGQNHLKRV-IVEMGGKDT--VVVD 297 (538)
T ss_dssp CCTTSEEECCBCTTTTHHHHH----HCTTEEEEEEESCHHHH--HHHHHHHTSCCTTCCSCCEE-EEECCCCCE--EEEC
T ss_pred CCCCeEEEEecCCHHHHHHHH----hCCCcCEEEEECCHHHH--HHHHHHhhhccccccccccE-EEecCCCCc--eEEC
Confidence 542 2221 3 443333443 24889999855553221 1111 1000 0 01 011223333 3445
Q ss_pred CCCCHHHHHHhhhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC----C------------------HHH
Q 013679 243 IYASPVHIAADLLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP----R------------------GEF 296 (438)
Q Consensus 243 ~~Anp~~vAaDLLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~----r------------------~~i 296 (438)
++||.+.+|-.++.-+=. --.+...++... +.. +++.+.+.+.++.+. . .+.
T Consensus 298 ~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~ 375 (538)
T 3qan_A 298 RDADLDLAAESILVSAFGFSGQKCSAGSRAVIHK-DVY-DEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSY 375 (538)
T ss_dssp TTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEET-TTH-HHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCccCceeEEeh-HHH-HHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHH
Confidence 678999877776643221 223333333333 243 777777777766552 0 112
Q ss_pred HHHhh------------------------------------c-CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH
Q 013679 297 ASKAL------------------------------------G-HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE 335 (438)
Q Consensus 297 a~~sl------------------------------------~-~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~ 335 (438)
++.+. + .| .|+-++|+|||++++|..--=| ..|.++|..
T Consensus 376 i~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~ 455 (538)
T 3qan_A 376 IEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRA 455 (538)
T ss_dssp HHHHHHHSEEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHH
T ss_pred HHHHHHCCeEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHH
Confidence 22221 1 13 2455789999999999853222 567788865
Q ss_pred ---HHHhhcccccccccC-CCCcccccccccCCCCCCCC-----CCcc-ccccCcccccccceeeEEE
Q 013679 336 ---KWESIIENAGSVFLG-EWTPESVGDYASGTNHVLPT-----YGYA-RMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 336 ---~~l~~i~nAGaiFlG-~~sp~a~GDY~aGpNHvLPT-----~G~A-R~~sgLsv~~FlK~~s~~~ 393 (438)
.+..++ .+|.|++. .++.. .+.-+|= +|.. |+.|..+++.|+..-++..
T Consensus 456 ~a~~~~~~l-~aG~V~iN~~~~~~--------~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~ 514 (538)
T 3qan_A 456 HIEQAKREF-HVGNLYFNRNCTGA--------IVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSE 514 (538)
T ss_dssp HHHHHHHHC-CCSEEEESSCSCCC--------CTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEE
T ss_pred HHHHHHHhC-CeeEEEEeCCCCCC--------CCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEE
Confidence 466666 59999999 43321 1334554 4556 8888889999998877654
No 46
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=93.88 E-value=7.2 Score=40.66 Aligned_cols=324 Identities=15% Similarity=0.131 Sum_probs=172.8
Q ss_pred CCchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc--cCCC
Q 013679 23 IDFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQ--KSAE 100 (438)
Q Consensus 23 ~~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q--~~~~ 100 (438)
....+-.+..+.+.+.++++.|+=..-.++..-+. +. +.+.-+..+++.++.|.+.- ....
T Consensus 93 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~-ea~~ev~~~~~~~~~~a~~~~~~~~~ 155 (516)
T 1uzb_A 93 WPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKN----------------WV-EASADVAEAIDFIEYYARAALRYRYP 155 (516)
T ss_dssp SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HH-HHHHHHHHHHHHHHHHHHHHGGGCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------HH-HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33445566677777777777776555555555321 01 11122555666666554321 1111
Q ss_pred c-eEEecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHc
Q 013679 101 T-SVENMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKA 174 (438)
Q Consensus 101 ~-~~~~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~ 174 (438)
. .....+|...-.++.|+.-|++..|- -|| ...+.-.+||-.||+.=| +=|.. ..|. +....+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~P~GVv~~I~Pw---N~P~~~~~~~~a~ALaaGN~VV--lKps~----~tp~ta~~l~~l~~ea 226 (516)
T 1uzb_A 156 AVEVVPYPGEDNESFYVPLGAGVVIAPW---NFPVAIFTGMIVGPVAVGNTVI--AKPAE----DAVVVGAKVFEIFHEA 226 (516)
T ss_dssp CCCCCCCTTEEEEEEEEECCEEEEECCS---SSTTHHHHHHHHHHHHTTCEEE--EECCG----GGHHHHHHHHHHHHHH
T ss_pred cccccCCCCceEEEEEeccceEEEECCC---ccHHHHHHHHHHHHHHcCCeEE--EeCCC----CCHHHHHHHHHHHHHh
Confidence 1 11123566667789999999999995 366 555667889999998643 44431 3332 22345566
Q ss_pred CCch-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcC--------CCC-cccccCCCCCceEEEEe
Q 013679 175 GVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQN--------SEA-MISIDMPAGPSEVLVIA 241 (438)
Q Consensus 175 Gv~e-Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~--------~~~-~VgID~~AGPSEvlIiA 241 (438)
|... ++. .| |...-.+|. +-|.||+|.==|..=| .|++... .+. .|-. -+-|-+= +|-
T Consensus 227 GlP~gvv~vv~g~~~~~~~~L~----~~~~v~~I~FTGS~~~--G~~i~~~aa~~~~~~~~~~~v~l-ElGGk~p--~iV 297 (516)
T 1uzb_A 227 GFPPGVVNFLPGVGEEVGAYLV----EHPRIRFINFTGSLEV--GLKIYEAAGRLAPGQTWFKRAYV-ETGGKNA--IIV 297 (516)
T ss_dssp TCCTTSEEECCCSSSHHHHHHH----TCTTCCEEEEESCHHH--HHHHHHHHTSCCTTCCSCCEEEE-ECCCCEE--EEE
T ss_pred CCCcCeEEEEeCCCchhhhhhh----cCCCcCEEEecCCHHH--HHHHHHHhhhccccccccceeEE-ecCCccc--eeE
Confidence 6542 222 24 554444554 2488999985555322 2222110 000 0111 1224443 444
Q ss_pred cCCCCHHHHHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC---------------------HHH
Q 013679 242 DIYASPVHIAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR---------------------GEF 296 (438)
Q Consensus 242 D~~Anp~~vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r---------------------~~i 296 (438)
|++||.+..|-.++.-+ =.--.|...++... +.. +++.+.+.+.++.+.- .+.
T Consensus 298 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~ 375 (516)
T 1uzb_A 298 DETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQ-GAY-EPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSY 375 (516)
T ss_dssp CTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEH-HHH-HHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEch-HHH-HHHHHHHHHHHHhccCCCCccccccCCCCCHHHHHHHHHH
Confidence 66789988777665322 11223444444333 343 6666666666654420 011
Q ss_pred HHHh----------------------------------hc---CC---eEEEeCCHHHHHHHhhhhcccc--ceecccCh
Q 013679 297 ASKA----------------------------------LG---HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKDA 334 (438)
Q Consensus 297 a~~s----------------------------------l~---~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~p 334 (438)
++.+ +. .| .|+.++|+|||++++|.. +-. ..|.++|.
T Consensus 376 i~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~-~~gL~a~v~t~d~ 454 (516)
T 1uzb_A 376 IEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDT-PYGLTGGVYSRKR 454 (516)
T ss_dssp HHHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCS-SCCSEEEEECSCH
T ss_pred HHHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcC-CCCceEEEECCCH
Confidence 1111 10 12 345578999999999997 333 56778887
Q ss_pred HH---HHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCc-ccccccceeeEE
Q 013679 335 EK---WESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGV-SLDSFLKYMTVQ 392 (438)
Q Consensus 335 ~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgL-sv~~FlK~~s~~ 392 (438)
.. +..++ ++|.|++..++... .++-+|= +|..|+.+|. +++.|+..-++.
T Consensus 455 ~~a~~~~~~l-~aG~v~iN~~~~~~-------~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~ 513 (516)
T 1uzb_A 455 EHLEWARREF-HVGNLYFNRKITGA-------LVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVA 513 (516)
T ss_dssp HHHHHHHHHS-CCSEEEESSCSCCC-------CTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhC-CEeEEEEeCCCCCC-------CCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEE
Confidence 54 55666 79999999743221 1223454 4555444443 356777766653
No 47
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=93.79 E-value=7.3 Score=40.48 Aligned_cols=261 Identities=15% Similarity=0.135 Sum_probs=138.1
Q ss_pred EEEEEEecceeeEeecCCCCCCchH-hhhhcccceecCCCeEEEecCCCCCCCCCHHHH-HHH-------HHcCCc-hhh
Q 013679 111 CKRVARSIGSVGLYVPGGTAVLPST-ALMLSVPAQIAGCKTVVLATPPSQDGSICKEVL-YCA-------KKAGVT-HIL 180 (438)
Q Consensus 111 ~g~r~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~iL-~AA-------~l~Gv~-eIy 180 (438)
.-.++.|+.-|++..|- .+|+--+ +....+||-.||+.=|+= |.. ..|.+- .-+ ..+|+. .++
T Consensus 130 ~~~~~~P~GVv~~I~Pw-N~P~~~~~~~~~~~~ALaaGN~VVlK--ps~----~tp~t~~~l~~l~~~al~~aGlP~gvv 202 (510)
T 1ez0_A 130 IRRQQIALGPVAVFGAS-NFPLAFSAAGGDTASALAAGCPVIVK--GHT----AHPGTSQIVAECIEQALKQEQLPQAIF 202 (510)
T ss_dssp EEEEEEECSCEEEECCS-SCTTTTSTTSHHHHHHHHHTCCEEEE--CCT----TCHHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred ceEEEecCcEEEEECCc-cchhhhhhhHHHHHHHHHcCCEEEEE--CCC----CchHHHHHHHHHHHHHHHHhCCCCCeE
Confidence 34678999999999995 3444333 246789999999875543 431 344321 112 335764 333
Q ss_pred hc--c-hHHHHHHHhhcCCCCCCceEEecCCcHHH------HHHHHHhcCCCCcccccCCCCCceEEEEecCCCCHH--H
Q 013679 181 KA--G-GAQAISAMAWGTESCPKVEKIFGPGNQYV------TAAKMILQNSEAMISIDMPAGPSEVLVIADIYASPV--H 249 (438)
Q Consensus 181 ~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~--~ 249 (438)
.+ | |...-.+|.= -|.||+|.==|..-| ++|+++-.. .|-.. +-|-+=++| |++||.+ .
T Consensus 203 ~vv~g~~~~~g~~L~~----~p~v~~I~FTGS~~~G~~i~~~aa~~l~~~---pv~lE-LGGk~p~iV--~~dADl~~~~ 272 (510)
T 1ez0_A 203 TLLQGNQRALGQALVS----HPEIKAVGFTGSVGGGRALFNLAHERPEPI---PFYGE-LGAINPTFI--FPSAMRAKAD 272 (510)
T ss_dssp EEECCSCTHHHHHHHH----CTTCCEEEEESCHHHHHHHHHHHHHSSSCC---CEEEE-CCCCCEEEE--CHHHHHHCTT
T ss_pred EEEeCCcHHHHHHHHc----CCCCCEEEEeCcHHHHHHHHHHhhccCCCc---cEEEE-CCCCCeEEE--eCCCCccHHH
Confidence 32 4 5554445542 478999983333222 233222000 01111 235554444 4447777 5
Q ss_pred HHHhhhhccCc----CCCCce-EEEecCchhhHHHHHHHHHHHHhcCC-----C-------HHHHHHhhc----------
Q 013679 250 IAADLLSQAEH----GPDSQV-VLVIVGDGVDLDAIEQEISKQCQSLP-----R-------GEFASKALG---------- 302 (438)
Q Consensus 250 vAaDLLaQAEH----d~~a~~-vLvt~s~~la~~~V~~ei~~ql~~l~-----r-------~~ia~~sl~---------- 302 (438)
.|-.++.-+=. --.|.. +||-.+ ... ++..+.+.+.++.+. . .+.++.+++
T Consensus 273 aa~~i~~~~~~n~GQ~C~a~~rvlV~~~-~i~-d~f~~~l~~~~~~~~~gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg 350 (510)
T 1ez0_A 273 LADQFVASMTMGCGQFCTKPGVVFALNT-PET-QAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQ 350 (510)
T ss_dssp HHHHHHHHHTGGGGCCTTCCCEEEEESS-HHH-HHHHHHHHHHHHHCCCBCCSSHHHHHHHHHHHHHHHTSTTEEEEECC
T ss_pred HHHHHHHHHHcCCCCCcCCCCEEEEeCC-ccH-HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEecC
Confidence 55554432222 223333 444443 232 555555555554432 0 011222221
Q ss_pred ----------------------------CC---eEEEeCCHHHHHHHhhhhccccc--eecccCh-----HHHHhhcc-c
Q 013679 303 ----------------------------HS---FMVFARDMLEGISFSNLYAPEHL--IVNVKDA-----EKWESIIE-N 343 (438)
Q Consensus 303 ----------------------------~g---~ii~v~~l~ea~~~~N~~APEHL--el~~~~p-----~~~l~~i~-n 343 (438)
.| .++.++|+|||++++|.. +-.| .|.++|. +.++.+++ .
T Consensus 351 ~~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~-~~gLaa~v~t~d~~~~~a~~~~~~l~~~ 429 (510)
T 1ez0_A 351 AESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEML-AGSLTATIHATEEDYPQVSQLIPRLEEI 429 (510)
T ss_dssp CCTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTC-CCEEEEEEECCGGGHHHHHHHHHHHHTT
T ss_pred CCCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcC-CCCeEEEEEccCcCHHHHHHHHHHHhhc
Confidence 12 234478999999999996 3444 5677764 45777775 8
Q ss_pred ccccccCCCCccc-ccccccCCCCCCC--CCCcccc--ccCcccccccceeeEEEe
Q 013679 344 AGSVFLGEWTPES-VGDYASGTNHVLP--TYGYARM--YGGVSLDSFLKYMTVQSL 394 (438)
Q Consensus 344 AGaiFlG~~sp~a-~GDY~aGpNHvLP--T~G~AR~--~sgLsv~~FlK~~s~~~~ 394 (438)
+|.|++..++... +.+ +..|-.| -+|..|. .|..+++.|++..+++..
T Consensus 430 aG~V~iN~~~~~~~~~~---~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~~~ 482 (510)
T 1ez0_A 430 AGRLVFNGWPTGVEVGY---AMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQAL 482 (510)
T ss_dssp EEEEEESSCSSCCCCSS---SCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEESC
T ss_pred ccEEEECCCCccCccCC---CCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEcCC
Confidence 9999999754211 111 1222222 1233332 566789999998888865
No 48
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=93.68 E-value=7.6 Score=40.34 Aligned_cols=315 Identities=17% Similarity=0.146 Sum_probs=168.8
Q ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCceE
Q 013679 24 DFSSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSAETSV 103 (438)
Q Consensus 24 ~~~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~~~~~ 103 (438)
...+-.+..+.+-+.++++.|+=..-.++..-+. +.+....-+..+++.++.|.+.- .+ |.-
T Consensus 80 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~ea~~~Ev~~~~~~~~~~a~~~-~~-~~g 141 (495)
T 1wnd_A 80 TPKVRAECLLKLADVIEENGQVFAELESRNCGKP----------------LHSAFNDEIPAIVDVFRFFAGAA-RC-LNG 141 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HHHHHHTHHHHHHHHHHHHHHHT-TC-CEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------HHHHHHHHHHHHHHHHHHHHHHH-HH-hcC
Confidence 3344455566666666666665544445444321 11111202666777777665432 21 211
Q ss_pred E----ecCceEEEEEEEecceeeEeecCCCCCCc-hHhhhhcccceecCCCeEEEecCCCCCCCCCHHH-HHHHHHc---
Q 013679 104 E----NMKGVRCKRVARSIGSVGLYVPGGTAVLP-STALMLSVPAQIAGCKTVVLATPPSQDGSICKEV-LYCAKKA--- 174 (438)
Q Consensus 104 ~----~~~Gv~~g~r~~Pi~rvG~YVPGG~a~yp-StvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~i-L~AA~l~--- 174 (438)
+ ..+|...-.++.|+.-|++..|- -|| ...+.-.+||-.||+. ||+=|.. ..|.+ +.-++++
T Consensus 142 ~~~~~~~~~~~~~~~~~P~GVV~~I~Pw---N~P~~~~~~~~a~ALaaGN~--VVlKps~----~tp~t~~~l~~l~~ea 212 (495)
T 1wnd_A 142 LAAGEYLEGHTSMIRRDPLGVVASIAPW---NYPLMMAAWKLAPALAAGNC--VVLKPSE----ITPLTALKLAELAKDI 212 (495)
T ss_dssp ECBEEEETTEEEEEEEEECSEEEEECCS---SSHHHHHHHHHHHHHHTTCE--EEEECCT----TCCHHHHHHHHHHTTT
T ss_pred ccccCCCCCceeEEeeecCCeEEEECCC---cchHHHHHHHHHHHHHcCCe--eEeeCCC----CChHHHHHHHHHHHHh
Confidence 1 12465666789999999999995 467 4455678999999986 3344442 23322 1222222
Q ss_pred ---CCchhhhcc-hHHHHHHHhhcCCCCCCceEEecCCcHHHH------HHHHHhcCCCCcccccCCCCCceEEEEecCC
Q 013679 175 ---GVTHILKAG-GAQAISAMAWGTESCPKVEKIFGPGNQYVT------AAKMILQNSEAMISIDMPAGPSEVLVIADIY 244 (438)
Q Consensus 175 ---Gv~eIy~vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~------~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~ 244 (438)
|+=.|.. | |...-.+|. .-|.||+|.==|..-|- +|+++. .|-.. +-|-+=+ |-|++
T Consensus 213 lP~gvv~vv~-g~~~~~g~~L~----~~p~vd~I~FTGS~~~G~~i~~~aa~~l~-----~v~lE-LGGk~p~--iV~~d 279 (495)
T 1wnd_A 213 FPAGVVNILF-GRGKTVGDPLT----GHPKVRMVSLTGSIATGEHIISHTASSIK-----RTHME-LGGKAPV--IVFDD 279 (495)
T ss_dssp SCTTSEEECC-CCTTTTHHHHH----TCTTEEEEEEESCHHHHHHHHHHHGGGTC-----EEEEE-CCCCCEE--EECTT
T ss_pred CCcCeEEEEe-CCCHHHHHHHH----hCCCcCEEEEECcHHHHHHHHHHHHhcCC-----ccccc-cCCCCeE--EECCc
Confidence 2222222 4 554444454 25889999544443222 121111 01111 2344433 44566
Q ss_pred CCHHHHHHhhhhccCc----CCCCc-eEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHH
Q 013679 245 ASPVHIAADLLSQAEH----GPDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFA 297 (438)
Q Consensus 245 Anp~~vAaDLLaQAEH----d~~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia 297 (438)
||.+..|-.++.-+=. .-.+. -+||-.+ .. +++.+.+.+.++.+.- .+.+
T Consensus 280 ADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~--i~-d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i 356 (495)
T 1wnd_A 280 ADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKG--IY-DTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAV 356 (495)
T ss_dssp SCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETT--TH-HHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCcEEEecch--hH-HHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHH
Confidence 8988877766542211 12233 3444433 32 5666666555554410 0111
Q ss_pred HHhh--------------------------------------c-CC---eEEEeCCHHHHHHHhhhhcccc--ceecccC
Q 013679 298 SKAL--------------------------------------G-HS---FMVFARDMLEGISFSNLYAPEH--LIVNVKD 333 (438)
Q Consensus 298 ~~sl--------------------------------------~-~g---~ii~v~~l~ea~~~~N~~APEH--Lel~~~~ 333 (438)
+.+. + .| .|+-++|+|||++++|.. +-. ..|.++|
T Consensus 357 ~~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~-~~gL~a~v~t~d 435 (495)
T 1wnd_A 357 EEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDS-QYGLASSVWTKD 435 (495)
T ss_dssp HHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSS-SCCSEEEEECSB
T ss_pred HHHHhCCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcC-CCCeeEEEECCC
Confidence 1111 0 12 234578999999999986 332 5677888
Q ss_pred hH---HHHhhcccccccccCCCCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 334 AE---KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 334 p~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
.. .+..+++ +|.|++..+... +.-+|- +|..|..|..+++.|+..-++.
T Consensus 436 ~~~a~~~~~~l~-aG~V~iN~~~~~---------~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~ 492 (495)
T 1wnd_A 436 VGRAHRVSARLQ-YGCTWVNTHFML---------VSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 492 (495)
T ss_dssp HHHHHHHHHHCC-SSEEEESCCCCC---------CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHhCC-cceEEECCCCCC---------CCCCCCCCCCcCcCCccchHHHHHHhhCeEEEE
Confidence 64 4566664 899999975431 123454 4556776777788888777664
No 49
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=90.71 E-value=17 Score=37.67 Aligned_cols=317 Identities=17% Similarity=0.137 Sum_probs=171.5
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCceEE
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKS-AETSVE 104 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~-~~~~~~ 104 (438)
.+-.+..+++-+.++++.|+=..-.++..-+. +. +...+-+..+++.++.|...-.. ......
T Consensus 66 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----~~------------ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~ 129 (490)
T 2wme_A 66 MQRSRILRRAVDILRERNDELAALETLDTGKP----LA------------ETRSVDIVTGADVLEYYAGLVPAIEGEQIP 129 (490)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----HH------------HHTTTHHHHHHHHHHHHHHHGGGCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----HH------------HHHHHHHHHHHHHHHHHHhccccccCcccc
Confidence 33345566666666666665444444433211 10 00011245556666666543221 122333
Q ss_pred ecCceEEEEEEEecceeeEeecCCCCCCchHh-hhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHcCCch-
Q 013679 105 NMKGVRCKRVARSIGSVGLYVPGGTAVLPSTA-LMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVTH- 178 (438)
Q Consensus 105 ~~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStv-LM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~Gv~e- 178 (438)
..++...-.++.|+.-|++..| .-||-.+ +.-.+||-.||+.= |+=|.. ..|. +....+.+|+.+
T Consensus 130 ~~~~~~~~~~~~P~GVv~~I~P---wNfP~~~~~~~~a~ALaaGNtV--VlKPse----~tp~ta~~l~~l~~eaGlP~g 200 (490)
T 2wme_A 130 LRETSFVYTRREPLGVVAGIGA---WNYPVQIALWKSAPALAAGNAM--IFKPSE----VTPLTALKLAEIYTEAGVPDG 200 (490)
T ss_dssp EETTEEEEEEEEECSEEEEECC---SSSHHHHHHHHHHHHHHTTCEE--EEECCT----TSCHHHHHHHHHHHHHTCCTT
T ss_pred ccCCcceeEEecceeEEEEecc---ccCcchhhhhhHHHHHHcCCeE--EEECCc----CCHHHHHHHHHHHHHhCCCCC
Confidence 4556667778899999999999 3566444 45577999999863 344542 2332 223445567643
Q ss_pred hhhc--c-hHHHHHHHhhcCCCCCCceEEecCCcH-----HHH-HHHHHhcCCCCcccccCCCCCceEEEEecCCCCHHH
Q 013679 179 ILKA--G-GAQAISAMAWGTESCPKVEKIFGPGNQ-----YVT-AAKMILQNSEAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 179 Iy~v--G-GAQAIAAlAyGTetIp~VDkIvGPGN~-----yV~-~AK~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
++.+ | |.+.-.+|. .-|.||+|.==|.. -+. +|.+-+-. |-.. +-|=+= +|-|++||.+.
T Consensus 201 v~~vv~g~g~~~g~~L~----~~p~v~~I~FTGS~~~G~~i~~~~a~~~lk~----v~lE-LGGk~p--~iV~~dAdl~~ 269 (490)
T 2wme_A 201 VFNVLTGSGREVGQWLT----EHPLIEKISFTGGTSTGKKVMASASSSSLKE----VTME-LGGKSP--LIIFPDADLDR 269 (490)
T ss_dssp SEEECCSCTTTHHHHHH----HCTTCCEEEEESCHHHHHHHHHHHHHHHCCE----EEEE-CCCCCE--EEECTTSCHHH
T ss_pred cEEEEeCChHHHHHHHH----hCCCCCEEEEECChHHHHHHHHhhhccCCce----EEEE-cCCcCe--EEEccCccHHH
Confidence 3322 3 555444554 25889999733332 211 22221100 1000 112222 44567899998
Q ss_pred HHHhhhhccCcC----CCCc-eEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHhhc
Q 013679 250 IAADLLSQAEHG----PDSQ-VVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKALG 302 (438)
Q Consensus 250 vAaDLLaQAEHd----~~a~-~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~sl~ 302 (438)
.+..++.-+=.. -.|. -++|- ++.. +++.+.+.+.++.+.- ...++.+.+
T Consensus 270 A~~~~~~~~~~n~GQ~C~a~~rv~V~--~~i~-d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~ 346 (490)
T 2wme_A 270 AADIAVMANFFSSGQVCTNGTRVFIH--RSQQ-ARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKA 346 (490)
T ss_dssp HHHHHHHHHHGGGGCCTTCCCEEEEE--GGGH-HHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCcCCCceeeccc--hhHH-HHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHh
Confidence 887766432211 1223 34443 3343 6677767666655420 011222211
Q ss_pred ------------------------------------------CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH-
Q 013679 303 ------------------------------------------HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE- 335 (438)
Q Consensus 303 ------------------------------------------~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~- 335 (438)
.| .|+.++|+|||++++|.-- +=-..|.++|..
T Consensus 347 ~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~ 426 (490)
T 2wme_A 347 QKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLAR 426 (490)
T ss_dssp TTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHH
T ss_pred cCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHH
Confidence 12 3455799999999999731 112567788874
Q ss_pred --HHHhhcccccccccCCCCcccccccccCCCCCCCCC-----CccccccCcccccccceeeE
Q 013679 336 --KWESIIENAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 391 (438)
Q Consensus 336 --~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 391 (438)
.+..+++ +|.|++..+... +.-+|-+ |+.|+.|.-+++.|+..-++
T Consensus 427 a~~~~~~l~-aG~v~iN~~~~~---------~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v 479 (490)
T 2wme_A 427 AHRAIHRLE-AGICWINTWGES---------PAEMPVGGYKQSGVGRENGLTTLAHYTRIKSV 479 (490)
T ss_dssp HHHHHHHSC-CSEEEESCCSCC---------CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEE
T ss_pred HHHHHHHCC-eeEEEEeCCCCC---------CCCCCcccccccccCchhHHHHHHHhhceeEE
Confidence 5677775 899999854321 1236765 46788888889999877664
No 50
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=90.47 E-value=18 Score=37.50 Aligned_cols=320 Identities=15% Similarity=0.098 Sum_probs=171.8
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CceEE
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETSVE 104 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~~~~ 104 (438)
.+-.+..+.+.+.++++.|+=..-.++..-+- +. +.+.-+..+++.++.|.+.-.+- .-.+.
T Consensus 77 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~~-ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~ 139 (501)
T 1uxt_A 77 TERLAVLRKAADIIERNLDVFAEVLVMNAGKP----------------KS-AAVGEVKAAVDRLRLAELDLKKIGGDYIP 139 (501)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC----------------HH-HHHHHHHHHHHHHHTGGGGGGGTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----------------HH-HHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 34445566666666666665544445444221 11 11122666777777665432211 11122
Q ss_pred e---cC--ceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCH-HHHHHHHHcCCch
Q 013679 105 N---MK--GVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICK-EVLYCAKKAGVTH 178 (438)
Q Consensus 105 ~---~~--Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p-~iL~AA~l~Gv~e 178 (438)
. .+ +...-.++.|+.-|++..|- .+|+ ...+...+||-.||+.=|+= |.. .-.... .+....+.+|...
T Consensus 140 ~~~~~~~~~~~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~VVlK--ps~-~tp~t~~~l~~l~~eaGlP~ 214 (501)
T 1uxt_A 140 GDWTYDTLETEGLVRREPLGVVAAITPF-NYPL-FDAVNKITYSFIYGNAVVVK--PSI-SDPLPAAMAVKALLDAGFPP 214 (501)
T ss_dssp STTSSTTTTEEEEEEEEECSEEEEECCT-TSTT-HHHHHHHHHHHHTTCEEEEE--CCT-TSCHHHHHHHHHHHHTTCCT
T ss_pred ccccCCCcCceEEEEEeeccEEEEECCC-ccHH-HHHHHHHHHHHHcCCEEEEe--CCC-CchHHHHHHHHHHHHhCCCc
Confidence 2 22 44566788999999999995 3333 55567788999999865443 432 111122 2333455676642
Q ss_pred -hhhc--chHHHHHHHhhcCCCCCCceEEecCCcHHH------HHH-HHHhcCCCCcccccCCCCCceEEEEecCCCCHH
Q 013679 179 -ILKA--GGAQAISAMAWGTESCPKVEKIFGPGNQYV------TAA-KMILQNSEAMISIDMPAGPSEVLVIADIYASPV 248 (438)
Q Consensus 179 -Iy~v--GGAQAIAAlAyGTetIp~VDkIvGPGN~yV------~~A-K~~v~~~~~~VgID~~AGPSEvlIiAD~~Anp~ 248 (438)
++.+ |+...-.+|. .-|+||+|.==|..=| .+| |++.. . +-|-| -+|-|++||.+
T Consensus 215 gvv~vv~g~~~~g~~L~----~~~~vd~I~FTGS~~~G~~i~~~aal~~v~l--------E-LGGk~--p~iV~~dADl~ 279 (501)
T 1uxt_A 215 DAIALLNLPGKEAEKIV----ADDRVAAVSFTGSTEVGERVVKVGGVKQYVM--------E-LGGGD--PAIVLEDADLD 279 (501)
T ss_dssp TSEEECCCCHHHHHHHH----TCTTCCEEEEESCHHHHHHHHHHHCSSEEEE--------E-CCCCE--EEEECTTSCHH
T ss_pred CeEEEEeCCcHHHHHHH----hCCCcCEEEEeCcHHHHHHHHHhcCCCeEEE--------E-cCCcC--eEEECCCCCHH
Confidence 3322 4333333443 3489999944443211 111 22221 1 22444 34555678998
Q ss_pred HHHHhhhhccC----cCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC----------------------HHHHHHh--
Q 013679 249 HIAADLLSQAE----HGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR----------------------GEFASKA-- 300 (438)
Q Consensus 249 ~vAaDLLaQAE----Hd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r----------------------~~ia~~s-- 300 (438)
..|-.++.-+= .--.|...++... +.. ++..+.+.+.++.+.- .+.++.+
T Consensus 280 ~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ 357 (501)
T 1uxt_A 280 LAADKIARGIYSYAGQRCDAIKLVLAER-PVY-GKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVE 357 (501)
T ss_dssp HHHHHHHHHHHGGGGCSTTCEEEEEEEH-HHH-HHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCcCCcEEEecc-chH-HHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHH
Confidence 87776654321 1223333333332 243 5555555555544320 0011111
Q ss_pred ----------------------------------h--c-CC---eEEEeCCHHHHHHHhhhhc-cccceecccChH---H
Q 013679 301 ----------------------------------L--G-HS---FMVFARDMLEGISFSNLYA-PEHLIVNVKDAE---K 336 (438)
Q Consensus 301 ----------------------------------l--~-~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p~---~ 336 (438)
+ + .| .++-++|+|||++++|..- +--..|.++|.. .
T Consensus 358 ~Ga~~~~gG~~~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~ 437 (501)
T 1uxt_A 358 KGGRVLAGGRRLGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRR 437 (501)
T ss_dssp TTCEEEECCCBCSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHH
T ss_pred CCCEEEeCCccCCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHH
Confidence 1 1 12 3455788999999999852 123567788875 4
Q ss_pred HHhhcccccccccCCCCcccccccccCCCCCCC-----CCCccccccCcccccccceeeEEE
Q 013679 337 WESIIENAGSVFLGEWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 337 ~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~~~ 393 (438)
+..++ .+|.|++..+. .. .+.-+| .+|..|..|..+++.|+..-++..
T Consensus 438 ~~~~l-~~G~V~iN~~~-~~-------~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~ 490 (501)
T 1uxt_A 438 AVRLL-EVGAIYINDMP-RH-------GIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF 490 (501)
T ss_dssp HHHHC-CSSEEEETSCC-CC-------TTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEE
T ss_pred HHHhC-CEeeEEEeCCC-CC-------CCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEE
Confidence 55665 58999999752 11 122244 456778888888999998888754
No 51
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=88.64 E-value=24 Score=36.25 Aligned_cols=321 Identities=14% Similarity=0.081 Sum_probs=173.1
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCceeeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CceEE
Q 013679 26 SSIFSMVHPIVDDVRNRGDASVKDYTERFDKVKLEKVVENVSELPDPELDAAVKEAFDVAYNNIYAFHLAQKSA-ETSVE 104 (438)
Q Consensus 26 ~~~~~~V~~Il~~Vr~~GD~Al~~yt~kFDg~~~~~l~V~~~e~~~a~l~~~~~~ai~~A~~nI~~fh~~q~~~-~~~~~ 104 (438)
.+-.+..+.+.+.++++.|+=..-.++..-+. + .+.+.-+..+++.++.|.+.-..- .-...
T Consensus 62 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~----------------~-~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~ 124 (475)
T 1euh_A 62 IERAAYLHKVADILMRDKEKIGAILSKEVAKG----------------Y-KSAVSEVVRTAEIINYAAEEGLRMEGEVLE 124 (475)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCC----------------H-HHHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC----------------H-HHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 34445566666666666665444444444211 0 112233666777777665432210 11111
Q ss_pred e-cCc----eEE-EEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHc
Q 013679 105 N-MKG----VRC-KRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKA 174 (438)
Q Consensus 105 ~-~~G----v~~-g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~ 174 (438)
. .+| ... -.++.|+.-|++..|- .+|+ ...+...+||-.||+.=|+= |.. ..|. +....+.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~P~GVv~~I~Pw-N~P~-~~~~~~~~~ALaaGN~vVlK--ps~----~tp~t~~~l~~ll~~a 196 (475)
T 1euh_A 125 GGSFEAASKKKIAVVRREPVGLVLAISPF-NYPV-NLAGSKIAPALIAGNVIAFK--PPT----QGSISGLLLAEAFAEA 196 (475)
T ss_dssp GGGTCGGGTTEEEEEEEEECSEEEEECCT-TSTT-HHHHHHHHHHHHTTCEEEEE--CCS----TTHHHHHHHHHHHHHH
T ss_pred CCCCCccccceeeEEEEeccceEEEECCC-CchH-HHHHHHHHHHHHcCCEEEEe--CCC----cChHHHHHHHHHHHHh
Confidence 1 245 455 6788999999999995 3442 44556889999999865543 432 2333 22344556
Q ss_pred CCch-hhh--cc-hHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCC-CCcccccCCCCCceEEEEecCCCCHHH
Q 013679 175 GVTH-ILK--AG-GAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNS-EAMISIDMPAGPSEVLVIADIYASPVH 249 (438)
Q Consensus 175 Gv~e-Iy~--vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~-~~~VgID~~AGPSEvlIiAD~~Anp~~ 249 (438)
|... ++. .| |.+.-.+|. .-|+||+|.==|..-| .|++.... --.|-.. +-|-+= +|-|++||.+.
T Consensus 197 GlP~gvv~vv~g~~~~~~~~L~----~~~~v~~V~fTGS~~~--g~~i~~~aa~~~v~lE-lGGk~p--~iV~~dADl~~ 267 (475)
T 1euh_A 197 GLPAGVFNTITGRGSEIGDYIV----EHQAVNFINFTGSTGI--GERIGKMAGMRPIMLE-LGGKDS--AIVLEDADLEL 267 (475)
T ss_dssp TCCTTTEEECCCCHHHHHHHHH----HCTTCCEEEEESCHHH--HHHHHHHTTTSCEEEE-CCCCEE--EEECTTSCHHH
T ss_pred CCCcCeEEEEeCCcHHHHHHHH----hCCCcCEEEEECchHH--HHHHHHhcCCCcEEEE-cCCcCe--EEECCCCCHHH
Confidence 6542 222 24 454444454 2488999984444322 22221100 0002111 225553 45566799988
Q ss_pred HHHhhhhcc----CcCCCCceEEEecCchhhHHHHHHHHHHHHhcCCC---------------------HHHHHHhhc--
Q 013679 250 IAADLLSQA----EHGPDSQVVLVIVGDGVDLDAIEQEISKQCQSLPR---------------------GEFASKALG-- 302 (438)
Q Consensus 250 vAaDLLaQA----EHd~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~r---------------------~~ia~~sl~-- 302 (438)
.|-.++.-+ =..-.+...++... +.. +++.+.+.+.++.+.- .+.++.+.+
T Consensus 268 aa~~i~~~~~~n~GQ~C~a~~rv~V~~-~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~~G 345 (475)
T 1euh_A 268 TAKNIIAGAFGYSGQRCTAVKRVLVME-SVA-DELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKG 345 (475)
T ss_dssp HHHHHHHHHHGGGGCCSSSEEEEEEEH-HHH-HHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhcCCCcCCCCcEEEEeh-hHH-HHHHHHHHHHHHhccCCCccccCccCCCCCHHHHHHHHHHHHHHHHCC
Confidence 777665322 22233444444333 343 6666666666655420 111222211
Q ss_pred ---------------------------------CC---eEEEeCCHHHHHHHhhhhcc-ccceecccChH---HHHhhcc
Q 013679 303 ---------------------------------HS---FMVFARDMLEGISFSNLYAP-EHLIVNVKDAE---KWESIIE 342 (438)
Q Consensus 303 ---------------------------------~g---~ii~v~~l~ea~~~~N~~AP-EHLel~~~~p~---~~l~~i~ 342 (438)
.| .++.++|+|||++++|..-- --..|.++|.. .+..++
T Consensus 346 a~~~~gG~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l- 424 (475)
T 1euh_A 346 ATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQL- 424 (475)
T ss_dssp CEECSCCCEETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHS-
T ss_pred CEEEeCCccCCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhC-
Confidence 01 23447899999999999622 22567788875 455666
Q ss_pred cccccccCC-CCcccccccccCCCCCCCC-----CCccccccCcccccccceeeEE
Q 013679 343 NAGSVFLGE-WTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 392 (438)
Q Consensus 343 nAGaiFlG~-~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 392 (438)
++|.|++.. ++.. ++-+|- +|..|..|..+++.|+..-++.
T Consensus 425 ~~G~v~vN~~~~~~---------~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~ 471 (475)
T 1euh_A 425 EVGTVHINNKTQRG---------TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471 (475)
T ss_dssp CSSEEEESSCCCCC---------STTSCBCCEETTEESCBSHHHHHHHTEEEEEEE
T ss_pred CEeeEEECCCCCCC---------CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEE
Confidence 589999997 4431 234664 4566777777888888877764
No 52
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=82.25 E-value=2.6 Score=43.48 Aligned_cols=282 Identities=13% Similarity=0.104 Sum_probs=140.1
Q ss_pred HHHHHHHHHHHHHhc-cCCCceEEe---cCceEEEEEEEecceeeEeecCCCCCCchHhhhhcccceecCCCeEEEecCC
Q 013679 82 FDVAYNNIYAFHLAQ-KSAETSVEN---MKGVRCKRVARSIGSVGLYVPGGTAVLPSTALMLSVPAQIAGCKTVVLATPP 157 (438)
Q Consensus 82 i~~A~~nI~~fh~~q-~~~~~~~~~---~~Gv~~g~r~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPP 157 (438)
+..+++.++.|.+.. ....-.... .+|...-.++.|+.-|++..|- . |+-.. +.++||-.||+. ||+=|.
T Consensus 101 v~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~-n-P~n~p--~~~a~ALaaGN~--VVlKps 174 (463)
T 2h5g_A 101 LNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFES-R-PDCLP--QVAALAIASGNG--LLLKGG 174 (463)
T ss_dssp HHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESS-C-TTHHH--HHHHHHHHHTCE--EEEECC
T ss_pred HHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecC-C-cHHHH--HHHHHHHHcCCE--EEEECC
Confidence 455666677665321 111111111 2566667889999999999986 3 43322 678999999986 444454
Q ss_pred CCCCCCCHHHH----HHHHHc----CCchhhh--cchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCC-Ccc
Q 013679 158 SQDGSICKEVL----YCAKKA----GVTHILK--AGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSE-AMI 226 (438)
Q Consensus 158 ~~~G~i~p~iL----~AA~l~----Gv~eIy~--vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~-~~V 226 (438)
. ..|.+- .....+ |=..++. .||...-.+|. .-|.||+|.==|.. ...|++..... -.|
T Consensus 175 ~----~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~----~~p~vd~I~FTGS~--~~G~~i~~~aal~pv 244 (463)
T 2h5g_A 175 K----EAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCR----LDKMIDLIIPRGSS--QLVRDIQKAAKGIPV 244 (463)
T ss_dssp G----GGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCCC-----------CCCSEEEEESCH--HHHHHHHHHCSSSCB
T ss_pred C----CcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHH----hCCCcCEEEEECCH--HHHHHHHHhcCCCCE
Confidence 2 344221 122222 2122222 13322111221 23889999433332 22233221100 001
Q ss_pred cccCCCCCceEEEEecCCCCHHHHHHhhhhccC-cC--CCCce-EEEecCc---hhhHHHHHHHHHHHHhcC--CC----
Q 013679 227 SIDMPAGPSEVLVIADIYASPVHIAADLLSQAE-HG--PDSQV-VLVIVGD---GVDLDAIEQEISKQCQSL--PR---- 293 (438)
Q Consensus 227 gID~~AGPSEvlIiAD~~Anp~~vAaDLLaQAE-Hd--~~a~~-vLvt~s~---~la~~~V~~ei~~ql~~l--~r---- 293 (438)
+=-+-|-+ -+|-|++||.+..|..++.-+= ++ -.+.. +||-.+- .+. +++.+...+.=..+ ..
T Consensus 245 -~lElGGk~--p~iV~~dADl~~Aa~~i~~~~f~nGQ~C~a~~rvlV~~~i~d~p~~-~~~i~~~~~~Ga~v~~G~~~~~ 320 (463)
T 2h5g_A 245 -MGHSEGIC--HMYVDSEASVDKVTRLVRDSKCEYPAACNALETLLIHRDLLRTPLF-DQIIDMLRVEQVKIHAGPKFAS 320 (463)
T ss_dssp -CSCSCCCE--EEEECTTCCTTTHHHHHHHHHHSCTTSTTSEEEEEEEGGGTTSHHH-HHHHHHHHHTTCEEEECHHHHC
T ss_pred -EEecCCcc--eEEEcCCCCHHHHHHHHHHHhccCCCccccCcEEEEeccccchHHH-HHHHHHHHhCCCEEEeCCcccc
Confidence 11122333 3445566888877666553221 21 12223 4443332 132 44433332110000 00
Q ss_pred -HHHHHH---hhc---CC---eEEEeCCHHHHHHHhhhhcccc-ceecccChH---HHHhhcccccccccCCCCcccccc
Q 013679 294 -GEFASK---ALG---HS---FMVFARDMLEGISFSNLYAPEH-LIVNVKDAE---KWESIIENAGSVFLGEWTPESVGD 359 (438)
Q Consensus 294 -~~ia~~---sl~---~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~i~nAGaiFlG~~sp~a~GD 359 (438)
...... -+. .| .|+.++|+|||++++|.+--=| ..|.++|.. .+..++ .+|.|++..++..
T Consensus 321 ~g~~~~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l-~aG~V~iN~~~~~---- 395 (463)
T 2h5g_A 321 YLTFSPSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHV-DSACVFWNASTRF---- 395 (463)
T ss_dssp ---------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHC-CSSEEEESSCGGG----
T ss_pred cCccCCCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhC-CeeEEEEeCCccC----
Confidence 000001 111 13 3456899999999999853222 678888875 466666 4899999975421
Q ss_pred cccCCCCCCCCC-----Ccc--cc--ccCcccccccceeeEEE
Q 013679 360 YASGTNHVLPTY-----GYA--RM--YGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 360 Y~aGpNHvLPT~-----G~A--R~--~sgLsv~~FlK~~s~~~ 393 (438)
+.-+|=+ |.. |+ .|..+++.|+..-++..
T Consensus 396 -----~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~ 433 (463)
T 2h5g_A 396 -----SDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLR 433 (463)
T ss_dssp -----CSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEE
T ss_pred -----CCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEE
Confidence 1235655 666 65 67778899988887754
No 53
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=69.44 E-value=6.6 Score=41.08 Aligned_cols=86 Identities=12% Similarity=0.057 Sum_probs=55.1
Q ss_pred EEEeC---CH-----HHHHHHhhhhcccc--ceecccChH---HHHhhcc-cccccccCCCCc--ccccccccCCCCCCC
Q 013679 306 MVFAR---DM-----LEGISFSNLYAPEH--LIVNVKDAE---KWESIIE-NAGSVFLGEWTP--ESVGDYASGTNHVLP 369 (438)
Q Consensus 306 ii~v~---~l-----~ea~~~~N~~APEH--Lel~~~~p~---~~l~~i~-nAGaiFlG~~sp--~a~GDY~aGpNHvLP 369 (438)
|+.++ |. |||++++|.. +-. ..|.++|.. .+..+++ .+|.|++..++. .+.|-- ..+..+|
T Consensus 411 v~~~~~~~~~~~~~~deAi~~aN~~-~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~--~~~~~~p 487 (534)
T 2y53_A 411 VAPYRVTTDTNALPEAHAVALARRG-QGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHG--NVMPMSL 487 (534)
T ss_dssp EEEECCCCC---CTTHHHHHHHHTT-SSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSS--CCCTTSE
T ss_pred EEEECCCCCcccCCHHHHHHHHhCC-CCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccC--CCCCCCC
Confidence 45578 99 9999999985 333 567788864 5677887 699999997642 011100 0122344
Q ss_pred C-----CCccccc-cCcccccccceeeEEEe
Q 013679 370 T-----YGYARMY-GGVSLDSFLKYMTVQSL 394 (438)
Q Consensus 370 T-----~G~AR~~-sgLsv~~FlK~~s~~~~ 394 (438)
- +|..|.. |.-++..|++..+++..
T Consensus 488 fGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 488 HGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp ECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred CCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 3 3556663 45678889888888764
No 54
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=64.61 E-value=11 Score=40.02 Aligned_cols=257 Identities=15% Similarity=0.116 Sum_probs=134.4
Q ss_pred EEEEEEe-cceeeEeecCCCCCCch-HhhhhcccceecCCCeEEEecCCCCCCCCCHH----HHHHHHHcCCch-hhhc-
Q 013679 111 CKRVARS-IGSVGLYVPGGTAVLPS-TALMLSVPAQIAGCKTVVLATPPSQDGSICKE----VLYCAKKAGVTH-ILKA- 182 (438)
Q Consensus 111 ~g~r~~P-i~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPP~~~G~i~p~----iL~AA~l~Gv~e-Iy~v- 182 (438)
....++| +.-|++..|- -||- ...+.+.||- ||+. ||+-|.. ..|. +......+|+.. ++.+
T Consensus 193 ~~~~~r~p~GVV~~I~Pw---NfP~~~~~~~~apAL-aGNt--VVlKPs~----~tp~sa~~l~~ll~eAGlP~Gvvnvv 262 (563)
T 4e3x_A 193 NHTVYRGLEGFVAAISPF---NFTAIGGNLAGAPAL-MGNV--VLWKPSD----TAMLASYAVYRILREAGLPPNIIQFV 262 (563)
T ss_dssp EEEECCBCSSEEEEECCS---SCHHHHHHHHHHHHH-TTCC--EEEECCG----GGHHHHHHHHHHHHHTTCCTTSEEEC
T ss_pred ceEEEecCceEEEEECCc---hHHHHHHHHHHHHhh-cCCE--EEEECCC----CChHHHHHHHHHHHHhCCCCCeEEEE
Confidence 3345555 5888888884 3553 3344556776 7755 4444542 3332 223456677642 3322
Q ss_pred -c-hHHHHHHHhhcCCCCCCceEEecCCcH------HHHHHHHHhc-CCCCcccccCCCCCceEEEEecCCCCHHHHHHh
Q 013679 183 -G-GAQAISAMAWGTESCPKVEKIFGPGNQ------YVTAAKMILQ-NSEAMISIDMPAGPSEVLVIADIYASPVHIAAD 253 (438)
Q Consensus 183 -G-GAQAIAAlAyGTetIp~VDkIvGPGN~------yV~~AK~~v~-~~~~~VgID~~AGPSEvlIiAD~~Anp~~vAaD 253 (438)
| |...-.+|. +=|+||+|.==|.. +-++|+.+-. ..--.|-. -+-|-+ -+|.|++||.+..|..
T Consensus 263 ~g~g~~~g~~L~----~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~l-ElGGk~--p~IV~~dADld~Aa~~ 335 (563)
T 4e3x_A 263 PADGPTFGDTVT----SSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAG-ECGGKN--FHFVHSSADVDSVVSG 335 (563)
T ss_dssp CCCHHHHHHHHT----TCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEE-ECCCCE--EEEECTTSCHHHHHHH
T ss_pred eCCcHHHHHHHH----hCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceec-cCCCCC--ceeeCCCCCHHHHHHH
Confidence 3 554444443 24889999744443 2233332210 00000100 112333 3555678999998887
Q ss_pred hhhccCc----CCCCceEEEecCchhhHHHHHHHHHHHHhcCC-----C------------------HHHHHHhhc----
Q 013679 254 LLSQAEH----GPDSQVVLVIVGDGVDLDAIEQEISKQCQSLP-----R------------------GEFASKALG---- 302 (438)
Q Consensus 254 LLaQAEH----d~~a~~vLvt~s~~la~~~V~~ei~~ql~~l~-----r------------------~~ia~~sl~---- 302 (438)
++.-+=. --.|...++... ++. +++.+.+.+.++.+. . .+.++.+.+
T Consensus 336 iv~~~f~~~GQ~C~A~~rv~V~~-si~-d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga 413 (563)
T 4e3x_A 336 TLRSAFEYGGQKCSACSRLYVPK-SLW-PQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSL 413 (563)
T ss_dssp HHHHHHGGGGCSTTCEEEEEEEG-GGH-HHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTE
T ss_pred HHHHHHhcCCCCCcCCcEEEEec-chH-HHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCC
Confidence 7653321 123444444433 343 777777776666551 0 122222221
Q ss_pred -----------------------------------CC---eEEEeCC--HHHHHHHhhhhccc--cceecccChH---HH
Q 013679 303 -----------------------------------HS---FMVFARD--MLEGISFSNLYAPE--HLIVNVKDAE---KW 337 (438)
Q Consensus 303 -----------------------------------~g---~ii~v~~--l~ea~~~~N~~APE--HLel~~~~p~---~~ 337 (438)
.| .|+.++| +|||++++|.-.|- -..|.++|.. .+
T Consensus 414 ~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~ 493 (563)
T 4e3x_A 414 SILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEA 493 (563)
T ss_dssp EEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHH
T ss_pred EEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHH
Confidence 01 1223554 89999999432332 3567888876 56
Q ss_pred Hhhcc-cccccccCCCCcccccccccCCCCCCCCC-----Ccc-ccccCcccccccceeeEEE
Q 013679 338 ESIIE-NAGSVFLGEWTPESVGDYASGTNHVLPTY-----GYA-RMYGGVSLDSFLKYMTVQS 393 (438)
Q Consensus 338 l~~i~-nAGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~A-R~~sgLsv~~FlK~~s~~~ 393 (438)
..+++ .+|.|++..++.... ..-+|-+ |+. |..|..++..|+..-++-+
T Consensus 494 ~~~l~~~aG~v~IN~~~~~~~-------~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~ 549 (563)
T 4e3x_A 494 TRMLRNAAGNFYINDKSTGSV-------VGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKE 549 (563)
T ss_dssp HHHTTTTCSEEEESSCSCCCC-------TTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEE
T ss_pred HHhhhcCeeEEEEcCCCCCCC-------cCCCCCCCccccCCCCccCCHHHHHHhCceEEEEE
Confidence 67765 799999998643221 1123333 333 5666677888877666543
No 55
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=44.82 E-value=24 Score=34.02 Aligned_cols=74 Identities=18% Similarity=0.253 Sum_probs=50.5
Q ss_pred CCeEEEecCCCCCCCCCHHHHHHHHHcCCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCccc
Q 013679 148 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMIS 227 (438)
Q Consensus 148 V~~Iv~~TPP~~~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~Vg 227 (438)
+.++|++.|+.-+..---.+..|+..+|++.++-+=-..| ||++||...-.+-+. .+-
T Consensus 153 ~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~A-aa~~~~~~~~~~~~~---------------------vlV 210 (394)
T 3qfu_A 153 VTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTA-AAIAYGLDKSDKEHQ---------------------IIV 210 (394)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHH-HHHHTTTTSCSSCEE---------------------EEE
T ss_pred cceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHH-HHHHHhhccCCCCce---------------------EEE
Confidence 5688999998533222336788999999998888876544 467898654222111 155
Q ss_pred ccCCCCCceEEEEecC
Q 013679 228 IDMPAGPSEVLVIADI 243 (438)
Q Consensus 228 ID~~AGPSEvlIiAD~ 243 (438)
+|+=+|-+++.|+...
T Consensus 211 ~D~Gggt~dvsv~~~~ 226 (394)
T 3qfu_A 211 YDLGGGTFDVSLLSIE 226 (394)
T ss_dssp EEECSSCEEEEEEEEE
T ss_pred EEcCCCceeEEEEEEe
Confidence 7888999999888643
No 56
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=34.35 E-value=41 Score=32.75 Aligned_cols=75 Identities=16% Similarity=0.263 Sum_probs=50.5
Q ss_pred CCeEEEecCCCCCCCCCHHHHHHHHHcCCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCccc
Q 013679 148 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMIS 227 (438)
Q Consensus 148 V~~Iv~~TPP~~~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~Vg 227 (438)
+.++|++.|+.-+..---.+..||..+|++.+.-+=-..| ||++||...-.+. +.+ .+.+-
T Consensus 158 ~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~A-Aa~~~~~~~~~~~----~~~--------------~~vlV 218 (404)
T 3i33_A 158 VHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTA-AAIAYGLDKKGCA----GGE--------------KNVLI 218 (404)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHHTCEEEEEEEHHHH-HHHHTTTTSSCSS----SSC--------------CEEEE
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeccHHH-HHHHHHhhccccc----CCC--------------ceEEE
Confidence 5689999998533222346788999999998888876655 5689997643210 000 01245
Q ss_pred ccCCCCCceEEEEe
Q 013679 228 IDMPAGPSEVLVIA 241 (438)
Q Consensus 228 ID~~AGPSEvlIiA 241 (438)
+|+=.|=+++.|+-
T Consensus 219 ~D~GgGT~dvsv~~ 232 (404)
T 3i33_A 219 FDLGGGTFDVSILT 232 (404)
T ss_dssp EEECSSCEEEEEEE
T ss_pred EECCCCcEEEEEEE
Confidence 78888888888875
No 57
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=31.25 E-value=45 Score=32.65 Aligned_cols=74 Identities=16% Similarity=0.235 Sum_probs=47.7
Q ss_pred CCeEEEecCCCCCCCCCHHHHHHHHHcCCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCccc
Q 013679 148 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMIS 227 (438)
Q Consensus 148 V~~Iv~~TPP~~~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~Vg 227 (438)
+.++|++.|..-+..---.+..||..+|.+.+.-+=-..| ||++||.+.- +..-. .+.+-
T Consensus 150 ~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~A-Aa~~~~~~~~-----------------~~~~~--~~vlv 209 (409)
T 4gni_A 150 VTSAVITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAA-AVLAYDARPE-----------------ATISD--KIIVV 209 (409)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHH-HHHHTTC-----------------------CC--EEEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEEcCHHH-HHHHHhcccc-----------------cCCCC--CEEEE
Confidence 5678888887532222336888999999998877766555 5789997630 00000 01255
Q ss_pred ccCCCCCceEEEEe
Q 013679 228 IDMPAGPSEVLVIA 241 (438)
Q Consensus 228 ID~~AGPSEvlIiA 241 (438)
+|+=+|-+++-|+.
T Consensus 210 ~D~GgGT~dvsv~~ 223 (409)
T 4gni_A 210 ADLGGSRSDVTVLA 223 (409)
T ss_dssp EEECSSCEEEEEEE
T ss_pred EECCCCceEEEEEE
Confidence 78889999998864
No 58
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=25.66 E-value=75 Score=30.58 Aligned_cols=75 Identities=15% Similarity=0.188 Sum_probs=49.4
Q ss_pred CCeEEEecCCCCCCCCCHHHHHHHHHcCCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCccc
Q 013679 148 CKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMIS 227 (438)
Q Consensus 148 V~~Iv~~TPP~~~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~Vg 227 (438)
+.++|++.|+.-+..---.+..|+..+|++.++-+=-..| ||++||...-.+ .. +.+-
T Consensus 135 ~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~A-aa~~~~~~~~~~-------------------~~--~~lV 192 (383)
T 1dkg_D 135 VTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTA-AALAYGLDKGTG-------------------NR--TIAV 192 (383)
T ss_dssp CCEEEECBCTTCCHHHHHHHHHHHHHTTCEESCCCBHHHH-HHHHHTCCC-CC-------------------EE--EEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeccHHH-HHHHHHhccCCC-------------------Cc--EEEE
Confidence 5788888887421111235778999999998877754444 468899753100 00 1255
Q ss_pred ccCCCCCceEEEEecCC
Q 013679 228 IDMPAGPSEVLVIADIY 244 (438)
Q Consensus 228 ID~~AGPSEvlIiAD~~ 244 (438)
+|+=+|=+++.|+-...
T Consensus 193 vD~Gggttdvsv~~~~~ 209 (383)
T 1dkg_D 193 YDLGGGTFDISIIEIDE 209 (383)
T ss_dssp EEECSSCEEEEEEEEEC
T ss_pred EEcCCCeEEEEEEEEEe
Confidence 79999999999988653
No 59
>1vr0_A Probable 2-phosphosulfolactate phosphatase; 15026306, putative 2-phosphosulfolactate phosphatase, struct genomics; HET: 3SL; 2.49A {Clostridium acetobutylicum} SCOP: c.148.1.1
Probab=22.78 E-value=48 Score=31.78 Aligned_cols=69 Identities=19% Similarity=0.281 Sum_probs=45.1
Q ss_pred HHHHhhcCC--eEEEeCCHHHHHHHhhhhccccceecccChHHHHhhcccccccc-cCCCCccc-ccccccCCCCCCCC-
Q 013679 296 FASKALGHS--FMVFARDMLEGISFSNLYAPEHLIVNVKDAEKWESIIENAGSVF-LGEWTPES-VGDYASGTNHVLPT- 370 (438)
Q Consensus 296 ia~~sl~~g--~ii~v~~l~ea~~~~N~~APEHLel~~~~p~~~l~~i~nAGaiF-lG~~sp~a-~GDY~aGpNHvLPT- 370 (438)
.+..+|++| .|+.+.++|||.++++++- +...+.-+.- -.+--| | +|. ||.. ..+-+.|-.=||||
T Consensus 45 ti~~Al~~GA~~V~p~~~~eeA~~~a~~~~-~~~lLaGER~-----g~ki~G--FD~gN-SP~e~~~~~v~Gk~lVltTT 115 (247)
T 1vr0_A 45 VITTALNNGCKRVVPVLTVEEALKKVKEYG-KDAILGGERK-----GLKIEG--FDFSN-SPMEYTEDVVKGKTLIMTTT 115 (247)
T ss_dssp HHHHHHHTTCCEEEECSCHHHHHHHHHHHG-GGEEEEECBT-----TBCCTT--CSCCS-CGGGCCHHHHTTCEEEEECS
T ss_pred HHHHHHHCCCCEEEEeCCHHHHHHHHhhCC-CCeEEEEccC-----CccCCC--CCCCC-CHHHHhhcccCCCEEEEECC
Confidence 445577776 5999999999999999863 4444433310 111112 6 565 7865 45567999999998
Q ss_pred CCc
Q 013679 371 YGY 373 (438)
Q Consensus 371 ~G~ 373 (438)
+||
T Consensus 116 NGT 118 (247)
T 1vr0_A 116 NGT 118 (247)
T ss_dssp SHH
T ss_pred cHH
Confidence 666
No 60
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=22.30 E-value=1.1e+02 Score=29.04 Aligned_cols=74 Identities=19% Similarity=0.181 Sum_probs=49.9
Q ss_pred CCCeEEEecCCCCCCCCCHHHHHHHHHcCCchhhhcchHHHHHHHhhcCCCCCCceEEecCCcHHHHHHHHHhcCCCCcc
Q 013679 147 GCKTVVLATPPSQDGSICKEVLYCAKKAGVTHILKAGGAQAISAMAWGTESCPKVEKIFGPGNQYVTAAKMILQNSEAMI 226 (438)
Q Consensus 147 GV~~Iv~~TPP~~~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~~~~~~V 226 (438)
|..++|++.|+.-+..---.+..|+..+|++.++-+==..| ||++||.+.- + . .+.+
T Consensus 94 ~~~~~vitvP~~~~~~~r~~~~~a~~~aG~~~~~li~ep~A-aa~~~~~~~~------------------~--~--~~~l 150 (344)
T 1jce_A 94 FKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMA-AAIGSNLNVE------------------E--P--SGNM 150 (344)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHHTTCSEEEEEEHHHH-HHHHTTCCTT------------------S--S--SCEE
T ss_pred CCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEeccCCHHH-HHHhcCCCCC------------------C--C--ceEE
Confidence 45788888898522111225778999999998877754433 5589986420 0 0 0125
Q ss_pred cccCCCCCceEEEEecC
Q 013679 227 SIDMPAGPSEVLVIADI 243 (438)
Q Consensus 227 gID~~AGPSEvlIiAD~ 243 (438)
-+|+=+|=|++.++-++
T Consensus 151 VvDiGggttdvsv~~~~ 167 (344)
T 1jce_A 151 VVDIGGGTTEVAVISLG 167 (344)
T ss_dssp EEEECSSCEEEEEEETT
T ss_pred EEEeCCCeEEEEEEEcC
Confidence 68999999999999875
No 61
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=20.77 E-value=4.4e+02 Score=24.76 Aligned_cols=38 Identities=11% Similarity=-0.052 Sum_probs=22.1
Q ss_pred HHHHHHhhcCCeEEEe-----CCHHHHHHHhhhhccccceecc
Q 013679 294 GEFASKALGHSFMVFA-----RDMLEGISFSNLYAPEHLIVNV 331 (438)
Q Consensus 294 ~~ia~~sl~~g~ii~v-----~~l~ea~~~~N~~APEHLel~~ 331 (438)
.+++.++|++|.-|+| .|++|+-++.....--.+-+++
T Consensus 80 ~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v 122 (334)
T 3ohs_X 80 KAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLME 122 (334)
T ss_dssp HHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 3555566776665554 3778877776654433444443
Done!