Query 013680
Match_columns 438
No_of_seqs 293 out of 1527
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 15:06:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013680.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013680hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 4.1E-51 1.4E-55 415.4 24.1 306 105-436 17-374 (413)
2 2x0b_A Renin; hydrolase-hormon 100.0 2.8E-49 9.6E-54 397.9 25.3 277 98-425 51-344 (383)
3 3psg_A Pepsinogen; hydrolase(a 100.0 7.9E-49 2.7E-53 393.5 26.4 276 98-426 46-332 (370)
4 1tzs_A Cathepsin E; hydrolase, 100.0 2E-48 6.8E-53 388.2 27.0 280 96-425 11-303 (351)
5 1dpj_A Proteinase A; proteinas 100.0 2.4E-48 8.3E-53 384.3 27.1 285 99-436 4-304 (329)
6 3aup_A SBG7S, BG, basic 7S glo 100.0 2.4E-48 8.4E-53 394.5 27.1 309 99-436 11-361 (403)
7 1am5_A Pepsin, acid proteinase 100.0 5.4E-48 1.8E-52 381.0 25.5 273 99-425 3-285 (324)
8 2apr_A Rhizopuspepsin; hydrola 100.0 5.6E-48 1.9E-52 381.0 25.6 268 104-426 11-291 (325)
9 2bju_A Plasmepsin II; aspartic 100.0 5.3E-48 1.8E-52 395.2 26.0 286 98-436 128-425 (453)
10 3cms_A Chymosin B; hydrolase, 100.0 5.1E-48 1.8E-52 381.0 24.9 274 99-425 5-288 (323)
11 3k1w_A Renin; protease, altern 100.0 7.5E-48 2.6E-52 382.5 24.6 281 96-426 6-302 (341)
12 4aa9_A Chymosin; hydrolase, as 100.0 1.1E-47 3.8E-52 378.0 25.2 273 100-425 3-285 (320)
13 1htr_B Gastricsin; aspartyl pr 100.0 2.2E-47 7.6E-52 377.4 26.0 272 100-425 5-289 (329)
14 3c9x_A Trichoderma reesei aspa 100.0 7.6E-48 2.6E-52 380.7 21.7 275 104-426 11-296 (329)
15 1mpp_A Pepsin; hydrolase(acid 100.0 4.4E-47 1.5E-51 379.9 26.2 278 99-426 9-323 (361)
16 1oew_A Endothiapepsin; hydrola 100.0 3.8E-47 1.3E-51 375.7 24.3 273 105-426 12-295 (329)
17 1qdm_A Prophytepsin; aspartic 100.0 6.4E-47 2.2E-51 390.7 26.5 301 97-436 41-453 (478)
18 2qzx_A Candidapepsin-5; aspart 100.0 3.3E-47 1.1E-51 378.1 22.8 280 99-427 4-301 (342)
19 1j71_A Candidapepsin, aspartic 100.0 6.3E-47 2.1E-51 374.9 24.0 274 99-426 4-293 (334)
20 1miq_A Plasmepsin; aspartic pr 100.0 1.1E-46 3.9E-51 378.5 25.3 283 98-436 52-349 (375)
21 3qvc_A Histo-aspartic protease 100.0 4E-46 1.4E-50 381.6 25.0 285 97-436 126-424 (451)
22 3fv3_A SAPP1P-secreted asparti 100.0 1.3E-45 4.4E-50 366.2 24.6 271 99-425 4-297 (339)
23 1yg9_A Aspartic protease BLA G 100.0 1.3E-45 4.4E-50 364.9 23.9 273 100-425 9-294 (330)
24 3pvk_A Candidapepsin-2; hydrol 100.0 1.4E-45 4.7E-50 366.3 22.9 280 99-426 4-300 (342)
25 1t6e_X Xylanase inhibitor; two 100.0 2.6E-45 8.8E-50 369.6 24.2 291 100-428 5-335 (381)
26 1ibq_A Aspergillopepsin; aspar 100.0 7.4E-45 2.5E-49 358.7 24.2 269 106-426 12-291 (325)
27 2ewy_A Beta-secretase 2; BACE2 100.0 1.5E-44 5.3E-49 364.3 25.1 282 101-423 6-319 (383)
28 2qp8_A Beta-secretase 1; BACE1 100.0 4.4E-44 1.5E-48 362.4 28.1 280 102-422 15-330 (395)
29 1izd_A Aspartic proteinase; su 100.0 1.8E-44 6.3E-49 355.5 24.1 266 106-426 13-289 (323)
30 3vf3_A Beta-secretase 1; struc 100.0 3.2E-43 1.1E-47 356.9 29.5 278 105-423 25-338 (402)
31 1bxo_A Protein (penicillopepsi 100.0 2.1E-44 7.1E-49 355.2 19.3 266 106-426 13-289 (323)
32 3lpj_A Beta-secretase 1; alzhe 100.0 4.3E-43 1.5E-47 361.3 27.9 281 102-423 68-384 (455)
33 1b5f_A Protein (cardosin A); h 100.0 1.9E-43 6.4E-48 333.7 20.4 224 97-358 2-236 (239)
34 1wkr_A Polyporopepsin; hydrola 100.0 1.1E-42 3.7E-47 345.3 23.7 249 99-413 4-277 (340)
35 1lya_B Cathepsin D; lysosomal 100.0 1.6E-28 5.6E-33 231.6 20.4 187 227-425 3-202 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 7E-23 2.4E-27 165.0 9.6 92 98-218 3-96 (97)
37 1b5f_B Protein (cardosin A); h 98.0 6.4E-06 2.2E-10 64.0 5.5 58 378-436 3-62 (87)
38 1fmb_A EIAV protease; hydrolas 81.3 1.6 5.5E-05 34.5 4.3 27 110-138 9-35 (104)
39 2hs1_A HIV-1 protease; ultra-h 80.6 1.8 6.2E-05 33.8 4.3 26 111-138 10-35 (99)
40 3liy_A Protease; hydrolase, hy 77.8 2.2 7.5E-05 34.1 4.0 27 112-138 13-42 (116)
41 3ec0_A Protease; HIV-2, inhibi 76.1 2.8 9.5E-05 32.7 4.1 26 111-138 10-35 (99)
42 2hah_A Protease, retropepsin; 71.6 3.9 0.00013 32.9 4.0 25 111-138 16-40 (116)
43 2i1a_A DNA damage-inducible pr 67.2 5.1 0.00017 33.2 4.2 30 107-138 24-53 (148)
44 3sqf_A Protease; folded monome 62.8 8.3 0.00028 30.8 4.3 25 112-138 12-36 (114)
45 2i1a_A DNA damage-inducible pr 61.0 8.2 0.00028 31.9 4.3 34 312-353 25-58 (148)
46 3s8i_A Protein DDI1 homolog 1; 60.4 8 0.00027 32.4 4.1 29 109-139 24-52 (148)
47 3s8i_A Protein DDI1 homolog 1; 58.3 7.1 0.00024 32.7 3.4 35 312-354 23-57 (148)
48 3slz_A GAG-Pro-POL polyprotein 48.9 17 0.00057 29.8 4.0 27 110-138 23-49 (132)
49 2rsp_A RSV protease; hydrolase 46.8 17 0.00058 29.5 3.7 19 120-138 29-47 (124)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 43.0 22 0.00074 31.4 4.1 26 111-138 10-35 (203)
51 1bxo_A Protein (penicillopepsi 38.7 31 0.0011 32.4 4.9 41 300-349 4-44 (323)
52 1ibq_A Aspergillopepsin; aspar 38.4 36 0.0012 32.0 5.2 42 300-350 3-44 (325)
53 1izd_A Aspartic proteinase; su 33.9 42 0.0014 31.4 4.9 42 300-350 4-45 (323)
54 3c9x_A Trichoderma reesei aspa 26.7 71 0.0024 29.9 5.2 43 300-349 3-46 (329)
55 3ka2_A [L-Ala51;Gly51']HIV-1 p 26.6 58 0.002 28.6 4.1 27 110-138 113-139 (203)
56 1oew_A Endothiapepsin; hydrola 25.2 79 0.0027 29.6 5.2 42 301-349 4-46 (329)
57 2apr_A Rhizopuspepsin; hydrola 25.2 69 0.0024 29.9 4.7 40 301-349 5-46 (325)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=4.1e-51 Score=415.38 Aligned_cols=306 Identities=21% Similarity=0.329 Sum_probs=235.3
Q ss_pred cccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCCCCC-
Q 013680 105 QFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRS- 183 (438)
Q Consensus 105 ~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~- 183 (438)
..+.+||++|.||||||+|.|++||||+++||+| ..| .+|+||+.++|+++.|....
T Consensus 17 ~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c--~~c--------------------~~Sst~~~v~C~s~~C~~~~~ 74 (413)
T 3vla_A 17 ASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDC--DQN--------------------YVSSTYRPVRCRTSQCSLSGS 74 (413)
T ss_dssp TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEEC--SSS--------------------CCCTTCEECBTTSHHHHHTTC
T ss_pred CCCCeEEEEEEcCCCCcceEEEEeCCChhhhccc--CCC--------------------CCCCCcCccCCCccccccccc
Confidence 4467899999999999999999999999999999 334 25999999999999997532
Q ss_pred -CC---CC------CCCCCceeEecC-CCCceEEEEEEEEEEEeccCCCCCCC-CcccccEEEEeEEeccCCCCCCCCCc
Q 013680 184 -SC---KS------LKDPCPYIADYS-TEDTSSSGYLVDDILHLASFSKHAPQ-SSVQSSVIIGCGRKQTGSYLDGAAPD 251 (438)
Q Consensus 184 -~C---~~------~~~~c~y~~~Y~-~g~s~~~G~l~~D~l~l~~~~~~~~~-~~~~~~~~fGc~~~~~g~~~~~~~~d 251 (438)
.| .+ ..+.|.|.+.|+ ++ +++.|++++|+|+|+..++...+ ...++++.|||++.+.+..+ ...+|
T Consensus 75 ~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~-~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~-~~~~d 152 (413)
T 3vla_A 75 IACGDCFNGPRPGCNNNTCGVFPENPVIN-TATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNL-ASGVV 152 (413)
T ss_dssp CEEECCSSCCBTTBCSSEEEECCEETTTT-EECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTS-CTTCC
T ss_pred CCCcccccCCCCCCCCCcCcceeecCcCC-ceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCc-ccccc
Confidence 23 21 134699999994 64 68899999999999854321100 13457899999998742211 13579
Q ss_pred eEeecCCCCCChhHHHHhhcCCcCcEEEEecCC--CCceEEeCcCCCCC----------ceeeeeeecCCC---------
Q 013680 252 GVMGLGLGDVSVPSLLAKAGLIQNSFSICFDEN--DSGSVFFGDQGPAT----------QQSTSFLPIGEK--------- 310 (438)
Q Consensus 252 GIlGLg~~~~S~~~qL~~~g~i~~~FS~cL~~~--~~G~l~fG~~d~~~----------~~~~p~v~~~~~--------- 310 (438)
||||||++++|+++||+++++++++|||||.++ .+|.|+||+.+..+ ..++|++.....
T Consensus 153 GIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~ 232 (413)
T 3vla_A 153 GMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGE 232 (413)
T ss_dssp EEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTC
T ss_pred cccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccC
Confidence 999999999999999999988899999999973 57999999987532 345555543221
Q ss_pred -CccEEEeEeeEEecCeEeecC----------CcceEEcccCccccccHHHHHHHHHHHHHHhccccc--cccCccccce
Q 013680 311 -YDAYFVGVESYCIGNSCLTQS----------GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRI--SLQGNSWKYC 377 (438)
Q Consensus 311 -~~~y~v~l~~i~vg~~~~~~~----------~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~--~~~~~~~~~C 377 (438)
..+|+|+|++|+||++.+... ..++||||||++|+||+++|++|.++|.+++..++. .....+++.|
T Consensus 233 ~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C 312 (413)
T 3vla_A 233 PSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGAC 312 (413)
T ss_dssp CCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCE
T ss_pred CCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcce
Confidence 269999999999999988632 357999999999999999999999999988753221 1223457899
Q ss_pred eeccccc----ccCCCeEEEEEcC-CcEEEEecceeEEeeCCCCceEEEEEEEcCCCceeEEEe
Q 013680 378 YNASSEE----MLKVPDMRLIFSK-NQSFVVRNHIFSFPENEVGDHACFSYFTLEYNFTGILIL 436 (438)
Q Consensus 378 y~~~~~~----~~~~P~it~~f~g-g~~~~l~~~~y~~~~~~~~~~~Cl~~~~~~~~~~g~~il 436 (438)
|.+++.. ...+|+|+|+|.| +..|.|++++|+++..+ +..|++++.........|||
T Consensus 313 ~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~~~Il 374 (413)
T 3vla_A 313 FSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCLGVVDGGSNLRTSIVI 374 (413)
T ss_dssp EECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEECEEEEESSCSSSEEE
T ss_pred eccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEEEEEecCCCcccceeE
Confidence 9988643 2478999999965 48999999999998654 57899998765432234554
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=2.8e-49 Score=397.88 Aligned_cols=277 Identities=23% Similarity=0.405 Sum_probs=230.6
Q ss_pred ceeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCC--CCcccccccCCCCCCCCCCCCCCCccccCC
Q 013680 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAP--LSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175 (438)
Q Consensus 98 ~~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~--~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~ 175 (438)
..+++.|+.+.+||++|.||||||+|.|++||||+++||+| ..|.. ..| ..++.|||++|+||+..
T Consensus 51 ~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s--~~C~~~~~~C-------~~~~~y~~~~SsT~~~~--- 118 (383)
T 2x0b_A 51 SSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPS--SKCSRLYTAC-------VYHKLFDASDSSSYKHN--- 118 (383)
T ss_dssp CEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEB--TTSCTTSHHH-------HTSCCBCGGGCTTCEEE---
T ss_pred ceEeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEec--cCCCCCcccc-------cCCCCCCCCCCCcEEEC---
Confidence 35788899999999999999999999999999999999999 45542 222 23689999999999984
Q ss_pred CcCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEee
Q 013680 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMG 255 (438)
Q Consensus 176 ~~~C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlG 255 (438)
.|.|.+.|++| +++|.+++|+|+|++. .++ +.|||++.+.|..+....+|||||
T Consensus 119 ---------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~-~~Fg~a~~~~g~~f~~~~~dGIlG 172 (383)
T 2x0b_A 119 ---------------GTELTLRYSTG--TVSGFLSQDIITVGGI--------TVT-QMFGEVTEMPALPFMLAEFDGVVG 172 (383)
T ss_dssp ---------------EEEEEEECSSC--EEEEEEEEEEEEETTE--------EEE-EEEEEEEECCHHHHTTCSSSEEEE
T ss_pred ---------------CcEEEEEcCCc--cEEEEEEeeEEEEcCc--------eEE-EEEEEEEecCCcccccCCCceEec
Confidence 48999999997 5899999999999875 557 999999998775555557899999
Q ss_pred cCCCCCCh------hHHHHhhcCC-cCcEEEEecCC--C----CceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeE
Q 013680 256 LGLGDVSV------PSLLAKAGLI-QNSFSICFDEN--D----SGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESY 321 (438)
Q Consensus 256 Lg~~~~S~------~~qL~~~g~i-~~~FS~cL~~~--~----~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i 321 (438)
||++.+++ ..+|+++|++ +++||+||.++ . +|.|+||++|+.+ .+++.|+|+... .+|.|.|++|
T Consensus 173 Lg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~-~~w~v~l~~i 251 (383)
T 2x0b_A 173 MGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT-GVWQIQMKGV 251 (383)
T ss_dssp CSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST-TSCEEEECEE
T ss_pred cCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC-ceEEEEEeEE
Confidence 99998775 4568999998 89999999875 2 7999999999987 478999998875 8999999999
Q ss_pred EecCeEe-ecCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcE
Q 013680 322 CIGNSCL-TQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQS 400 (438)
Q Consensus 322 ~vg~~~~-~~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~ 400 (438)
+||++.+ ......+||||||+++++|+++|++|.++| ++.. ..+. |.++|.....+|+|+|+| +|..
T Consensus 252 ~v~~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i----~a~~-~~g~------~~v~C~~~~~~P~i~f~~-~g~~ 319 (383)
T 2x0b_A 252 SVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEAL----GAKK-RLFD------YVVKCNEGPTLPDISFHL-GGKE 319 (383)
T ss_dssp EESSCCCBSTTCEEEEECTTCSSEEECHHHHHHHHHHH----TCEE-CSSC------EEEEGGGTTTCCCEEEEE-TTEE
T ss_pred EeCCceEEcCCCcEEEEcCCCceEEcCHHHHHHHHHHh----CCcc-cCCc------EEEeccccccCceEEEEE-CCEE
Confidence 9999874 345678999999999999999988887665 3333 2221 778898777899999999 8899
Q ss_pred EEEecceeEEeeCCCCceEEEEEEE
Q 013680 401 FVVRNHIFSFPENEVGDHACFSYFT 425 (438)
Q Consensus 401 ~~l~~~~y~~~~~~~~~~~Cl~~~~ 425 (438)
|.|++++|+++..+.....|+..+.
T Consensus 320 ~~l~~~~yi~~~~~~~~~~C~~~~~ 344 (383)
T 2x0b_A 320 YTLTSADYVFQESYSSKKLCTLAIH 344 (383)
T ss_dssp EEECHHHHBCCCCCCTTSEEEBSEE
T ss_pred EEECHHHhEeeccCCCCCeEEEEEE
Confidence 9999999999865432458996443
No 3
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=7.9e-49 Score=393.48 Aligned_cols=276 Identities=24% Similarity=0.397 Sum_probs=230.6
Q ss_pred ceeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCc
Q 013680 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHP 177 (438)
Q Consensus 98 ~~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~ 177 (438)
..++|.|+.|.+||++|.||||||+|.|++||||+++||+|. .|....| ..++.|+|++|+|++..
T Consensus 46 ~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~--~C~~~~C-------~~~~~y~~~~SsT~~~~----- 111 (370)
T 3psg_A 46 GDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV--YCSSLAC-------SDHNQFNPDDSSTFEAT----- 111 (370)
T ss_dssp CCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSGGG-------TTSCCBCGGGCTTCEEE-----
T ss_pred ceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECC--CCCCccc-------CCCCCCCCccCcCcEEC-----
Confidence 457799999999999999999999999999999999999994 4543333 24689999999999985
Q ss_pred CCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecC
Q 013680 178 LCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLG 257 (438)
Q Consensus 178 ~C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg 257 (438)
.|.|.+.|++| ++.|.+++|+|+|++. .++++.|||++.+.+.++....+|||||||
T Consensus 112 -------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg 168 (370)
T 3psg_A 112 -------------SQELSITYGTG--SMTGILGYDTVQVGGI--------SDTNQIFGLSETEPGSFLYYAPFDGILGLA 168 (370)
T ss_dssp -------------EEEEEEESSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGGGGCSCSEEEECS
T ss_pred -------------CcEEEEEeCCc--eEEEEEEEEEEeeCCc--------ccCCeEEEEEEeecccccccCCccceeccC
Confidence 48999999997 5899999999999875 568999999999887655556789999999
Q ss_pred CCCCCh------hHHHHhhcCC-cCcEEEEecCC--CCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEEecCeE
Q 013680 258 LGDVSV------PSLLAKAGLI-QNSFSICFDEN--DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSC 327 (438)
Q Consensus 258 ~~~~S~------~~qL~~~g~i-~~~FS~cL~~~--~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vg~~~ 327 (438)
++.++. ..+|+++|++ +++||+||.++ .+|.|+||++|+.+ .+++.|+|+... .+|.|.|++|+||++.
T Consensus 169 ~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~-~~w~v~l~~i~v~g~~ 247 (370)
T 3psg_A 169 YPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE-GYWQITLDSITMDGET 247 (370)
T ss_dssp CGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE-TTEEEEECEEESSSSE
T ss_pred CccccccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccccc-ceeEEEEeEEEECCEE
Confidence 988764 4569999999 89999999985 57999999999987 468888888765 8999999999999987
Q ss_pred ee-cCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEEEecc
Q 013680 328 LT-QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNH 406 (438)
Q Consensus 328 ~~-~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~l~~~ 406 (438)
+. .....+||||||++++||+++|++|.++| ++.... ..+|.++|+....+|+|+|+| ||.+|.|+++
T Consensus 248 ~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i----~a~~~~------~g~~~v~C~~~~~lP~i~f~~-~g~~~~l~~~ 316 (370)
T 3psg_A 248 IACSGGCQAIVDTGTSLLTGPTSAIANIQSDI----GASENS------DGEMVISCSSIDSLPDIVFTI-DGVQYPLSPS 316 (370)
T ss_dssp EECTTCEEEEECTTCCSEEEEHHHHHHHHHHT----TCEECT------TCCEECCGGGGGGCCCEEEEE-TTEEEEECHH
T ss_pred EecCCCceEEEcCCCCcEECCHHHHHHHHHHh----CCcccC------CCcEEEECCCcccCCcEEEEE-CCEEEEECHH
Confidence 75 35678999999999999999988776554 443321 234889998878899999999 8999999999
Q ss_pred eeEEeeCCCCceEEEEEEEc
Q 013680 407 IFSFPENEVGDHACFSYFTL 426 (438)
Q Consensus 407 ~y~~~~~~~~~~~Cl~~~~~ 426 (438)
+|+++ .+ ..|+..+..
T Consensus 317 ~yi~~-~~---~~C~~~~~~ 332 (370)
T 3psg_A 317 AYILQ-DD---DSCTSGFEG 332 (370)
T ss_dssp HHEEE-CS---SCEEESEEE
T ss_pred Hhccc-CC---CEEEEEEEe
Confidence 99998 32 359976553
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=2e-48 Score=388.24 Aligned_cols=280 Identities=21% Similarity=0.376 Sum_probs=226.3
Q ss_pred CCceeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCC
Q 013680 96 GSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175 (438)
Q Consensus 96 ~~~~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~ 175 (438)
....+++.|+.+..|+++|.||||+|+|.|++||||+++||+|. .|....| ..++.|||++|+|++..
T Consensus 11 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~--~C~~~~C-------~~~~~y~~~~SsT~~~~--- 78 (351)
T 1tzs_A 11 QSAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSV--YCTSPAC-------KTHSRFQPSQSSTYSQP--- 78 (351)
T ss_dssp ---CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSGGG-------TTSCCBCGGGCTTCBCC---
T ss_pred CccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC--CCCcccc-------CCCCcCCcccCcceEEC---
Confidence 34457788888899999999999999999999999999999994 4443333 23689999999999983
Q ss_pred CcCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEee
Q 013680 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMG 255 (438)
Q Consensus 176 ~~~C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlG 255 (438)
.|.|.+.|++| ++.|.+++|+|+|++. .++++.|||++.+.+..+.....+||||
T Consensus 79 ---------------~~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilG 133 (351)
T 1tzs_A 79 ---------------GQSFSIQYGTG--SLSGIIGADQVSVEGL--------TVVGQQFGESVTEPGQTFVDAEFDGILG 133 (351)
T ss_dssp ---------------SCEEEEESSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGGGGCSCSEEEE
T ss_pred ---------------CCEEEEEeCCC--CeEEEEEEeEEEECCe--------EECCeEEEEEEeccccccccCCCceEEe
Confidence 59999999997 5899999999999875 5689999999988775554456799999
Q ss_pred cCCCCCCh------hHHHHhhcCC-cCcEEEEecCCC----CceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEEe
Q 013680 256 LGLGDVSV------PSLLAKAGLI-QNSFSICFDEND----SGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCI 323 (438)
Q Consensus 256 Lg~~~~S~------~~qL~~~g~i-~~~FS~cL~~~~----~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~v 323 (438)
||+..++. ..+|+++|++ +++||+||.+.. .|.|+||++|+.+ .+++.|+|+... .+|.|.|++|+|
T Consensus 134 Lg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v 212 (351)
T 1tzs_A 134 LGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQ-AYWQIALDNIQV 212 (351)
T ss_dssp CSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEE-TTEEEEEEEEEE
T ss_pred cCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCC-ceEEEEeCEEEE
Confidence 99988764 4569999998 899999998752 7999999999876 467788887654 799999999999
Q ss_pred cCeEee-cCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEE
Q 013680 324 GNSCLT-QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFV 402 (438)
Q Consensus 324 g~~~~~-~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~ 402 (438)
|++.+. .....+||||||++++||+++|++|.+++. +.... + .|.++|.....+|+|+|+| +|..+.
T Consensus 213 ~~~~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~----~~~~~-g------~~~~~C~~~~~~P~i~f~f-~g~~~~ 280 (351)
T 1tzs_A 213 GGTVMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIG----AAPVD-G------EYAVECANLNVMPDVTFTI-NGVPYT 280 (351)
T ss_dssp TTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHT----CEECS-S------SEEECGGGGGGSCCEEEEE-TTEEEE
T ss_pred CCceEEcCCCceEEeccCCcceeCCHHHHHHHHHHhC----CcccC-C------eEEEeCCCCccCCcEEEEE-CCEEEE
Confidence 998853 456789999999999999999888876653 33221 2 1677887767899999999 889999
Q ss_pred EecceeEEeeCCCCceEEEEEEE
Q 013680 403 VRNHIFSFPENEVGDHACFSYFT 425 (438)
Q Consensus 403 l~~~~y~~~~~~~~~~~Cl~~~~ 425 (438)
|++++|+++..+.....|+..+.
T Consensus 281 i~~~~yi~~~~~~~~~~C~~~~~ 303 (351)
T 1tzs_A 281 LSPTAYTLLDFVDGMQFCSSGFQ 303 (351)
T ss_dssp ECTTTSEECC-----CCEEESEE
T ss_pred ECHHHhEeeccCCCCCeEEEEEE
Confidence 99999998864322357996443
No 5
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.4e-48 Score=384.26 Aligned_cols=285 Identities=24% Similarity=0.406 Sum_probs=232.6
Q ss_pred eeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcC
Q 013680 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPL 178 (438)
Q Consensus 99 ~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~ 178 (438)
.+++.|+.+..|+++|.||||+|+|.|++||||+++||+|. .|....|. .++.|||++|+|++..
T Consensus 4 ~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~~------ 68 (329)
T 1dpj_A 4 DVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSN--ECGSLACF-------LHSKYDHEASSSYKAN------ 68 (329)
T ss_dssp EEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSHHHH-------TSCCBCGGGCTTCEEE------
T ss_pred ceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecC--CCCCcccC-------CcCcCCcccCcCeEEC------
Confidence 46788888999999999999999999999999999999995 44332222 3578999999999983
Q ss_pred CCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecCC
Q 013680 179 CKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGL 258 (438)
Q Consensus 179 C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~ 258 (438)
.|.|.+.|++| ++.|.+++|+|+|++. .++++.|||++.+.+..+.....+||||||+
T Consensus 69 ------------~~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~ 126 (329)
T 1dpj_A 69 ------------GTEFAIQYGTG--SLEGYISQDTLSIGDL--------TIPKQDFAEATSEPGLTFAFGKFDGILGLGY 126 (329)
T ss_dssp ------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCHHHHTTCSCSEEEECSC
T ss_pred ------------CcEEEEEECCc--eEEEEEEEEEEEECCe--------EECCeEEEEEEecCccccccCCcceEEEeCC
Confidence 58999999997 7899999999999875 5689999999998763233345799999999
Q ss_pred CCCChh------HHHHhhcCC-cCcEEEEecCC-----CCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEEecC
Q 013680 259 GDVSVP------SLLAKAGLI-QNSFSICFDEN-----DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGN 325 (438)
Q Consensus 259 ~~~S~~------~qL~~~g~i-~~~FS~cL~~~-----~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vg~ 325 (438)
..+++. .+|+++|++ +++||+||.+. ..|.|+||++|+.+ .+++.|+|+... .+|.|.|++|+||+
T Consensus 127 ~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~ 205 (329)
T 1dpj_A 127 DTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRK-AYWEVKFEGIGLGD 205 (329)
T ss_dssp GGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSB-TTBEEEEEEEEETT
T ss_pred chhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCC-ceEEEEeeeEEECC
Confidence 887753 468999998 79999999764 36999999999877 468888888765 79999999999999
Q ss_pred eEeecCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEEEec
Q 013680 326 SCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRN 405 (438)
Q Consensus 326 ~~~~~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~l~~ 405 (438)
+.+......+||||||++++||+++|++|.++|. +... ...||.++|.....+|+|+|+| +|.++.|++
T Consensus 206 ~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~----~~~~------~~g~~~~~C~~~~~~P~i~f~f-~g~~~~i~~ 274 (329)
T 1dpj_A 206 EYAELESHGAAIDTGTSLITLPSGLAEMINAEIG----AKKG------WTGQYTLDCNTRDNLPDLIFNF-NGYNFTIGP 274 (329)
T ss_dssp EEEECSSCEEEECTTCSCEEECHHHHHHHHHHHT----CEEC------TTSSEEECGGGGGGCCCEEEEE-TTEEEEECT
T ss_pred eEecCCCccEEeeCCCCcEECCHHHHHHHHHHhC----CccC------CCCeEEEECCCCCcCCcEEEEE-CCEEEEECH
Confidence 9887667889999999999999999888886663 2211 2346889998777899999999 789999999
Q ss_pred ceeEEeeCCCCceEEEEEE-EcC--CCceeEEEe
Q 013680 406 HIFSFPENEVGDHACFSYF-TLE--YNFTGILIL 436 (438)
Q Consensus 406 ~~y~~~~~~~~~~~Cl~~~-~~~--~~~~g~~il 436 (438)
++|+++.. ..|+..+ ... ....+.|||
T Consensus 275 ~~y~~~~~----~~C~~~~~~~~~~~~~~~~~iL 304 (329)
T 1dpj_A 275 YDYTLEVS----GSCISAITPMDFPEPVGPLAIV 304 (329)
T ss_dssp TTSEEEET----TEEEECEEECCCCTTTCSEEEE
T ss_pred HHhEecCC----CEEEEEEEecccCCCCCCcEEE
Confidence 99999863 3799544 332 122345665
No 6
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=2.4e-48 Score=394.52 Aligned_cols=309 Identities=19% Similarity=0.342 Sum_probs=231.3
Q ss_pred eeeec-ccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCc
Q 013680 99 THFFG-NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHP 177 (438)
Q Consensus 99 ~~~l~-~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~ 177 (438)
.+++. ++.+.+||++|.||||+|+|.|+|||||+++||+|. .| .+|+|++.++|+++
T Consensus 11 ~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~--~~--------------------~~Sst~~~~~C~s~ 68 (403)
T 3aup_A 11 VLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE--QQ--------------------YSSKTYQAPFCHST 68 (403)
T ss_dssp EEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS--SC--------------------CCCSSCBCCCTTBH
T ss_pred EEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCC--CC--------------------CCCCCCCccCCCCc
Confidence 46676 777889999999999999999999999999999993 23 35999999999998
Q ss_pred CCCCCC--CC---CCC------CCCCceeEecC-CCCceEEEEEEEEEEEeccCCCCC---CCCcccccEEEEeEEeccC
Q 013680 178 LCKSRS--SC---KSL------KDPCPYIADYS-TEDTSSSGYLVDDILHLASFSKHA---PQSSVQSSVIIGCGRKQTG 242 (438)
Q Consensus 178 ~C~~~~--~C---~~~------~~~c~y~~~Y~-~g~s~~~G~l~~D~l~l~~~~~~~---~~~~~~~~~~fGc~~~~~g 242 (438)
.|.... .| .++ .+.|.|.+.|+ ++ +.+.|.+++|+|+|++.++.. .....++++.|||++.+.+
T Consensus 69 ~C~~~~~~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~-~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~ 147 (403)
T 3aup_A 69 QCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQ-QTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLV 147 (403)
T ss_dssp HHHHTTCCCEEECSSSCBTTBCSSEEEEEEEETTTT-EEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGG
T ss_pred cccCccccCccccCCCCCCCCCCCcceeEeecCCCC-ceeeEEEEEEEEEecccCCccccccccccccCEEEECCccccc
Confidence 887531 12 121 14699999998 54 689999999999998742210 0013567899999998754
Q ss_pred C-CCCCCCCceEeecCCCCCChhHHHHhhcCCcCcEEEEecC--CCCceEEeCcCCCCCc----e-----eeeeeecCCC
Q 013680 243 S-YLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDE--NDSGSVFFGDQGPATQ----Q-----STSFLPIGEK 310 (438)
Q Consensus 243 ~-~~~~~~~dGIlGLg~~~~S~~~qL~~~g~i~~~FS~cL~~--~~~G~l~fG~~d~~~~----~-----~~p~v~~~~~ 310 (438)
. +. ....+||||||++.++++.||++..+.+++||+||.+ +..|.|+||+ |+.++ + .+.|+|+...
T Consensus 148 ~~~~-~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~ 225 (403)
T 3aup_A 148 QKGL-PRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTIT 225 (403)
T ss_dssp SSSS-STTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEEC
T ss_pred ccCC-CCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccC
Confidence 4 32 2367999999999999999997655558999999987 3679999999 65432 2 4444444322
Q ss_pred -CccEEEeEeeEEecCeEe-ec-CC---------cceEEcccCccccccHHHHHHHHHHHHHHhccccccccCcccccee
Q 013680 311 -YDAYFVGVESYCIGNSCL-TQ-SG---------FQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCY 378 (438)
Q Consensus 311 -~~~y~v~l~~i~vg~~~~-~~-~~---------~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy 378 (438)
..+|+|+|++|+||++.+ .. .. ..+||||||++++||+++|++|.++|.++++..........+++||
T Consensus 226 ~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~ 305 (403)
T 3aup_A 226 LQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCF 305 (403)
T ss_dssp TTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEE
T ss_pred CCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceE
Confidence 269999999999999988 42 21 2499999999999999999999999988775433222223457787
Q ss_pred ecccccccCCCeEEEEEcCC--cEEEEecceeEEeeCCCCceEEEEEEEcCCCceeEEEe
Q 013680 379 NASSEEMLKVPDMRLIFSKN--QSFVVRNHIFSFPENEVGDHACFSYFTLEYNFTGILIL 436 (438)
Q Consensus 379 ~~~~~~~~~~P~it~~f~gg--~~~~l~~~~y~~~~~~~~~~~Cl~~~~~~~~~~g~~il 436 (438)
+|.....+|+|+|+|.|+ ..|.|++++|+++..+ +..|++++.......+.|||
T Consensus 306 --~c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~~~~~~~~~~~~~~IL 361 (403)
T 3aup_A 306 --NSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQP--GVTCLGVMNGGMQPRAEITL 361 (403)
T ss_dssp --CGGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEECEEECCSCCSSSEEE
T ss_pred --ECCCcCcCCcEEEEEcCCCceEEEEcccceEEEcCC--CeEEEEEEcCCCCCCCcEEE
Confidence 465556799999999655 5999999999998643 56899887765432234554
No 7
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=5.4e-48 Score=380.98 Aligned_cols=273 Identities=21% Similarity=0.329 Sum_probs=225.4
Q ss_pred eeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcC
Q 013680 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPL 178 (438)
Q Consensus 99 ~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~ 178 (438)
.+++.|+.+..|+++|.||||+|++.|++||||+++||+|. .|.+..|. .++.|+|++|+|++..
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~~------ 67 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSS--HCSAQACS-------NHNKFKPRQSSTYVET------ 67 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBT--TCCSHHHH-------TSCCBCGGGCTTCEEE------
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC--CCCccccc-------CCCcCCCccCCCeEeC------
Confidence 36778888999999999999999999999999999999994 44432332 3578999999999985
Q ss_pred CCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecCC
Q 013680 179 CKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGL 258 (438)
Q Consensus 179 C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~ 258 (438)
.|.|++.|++| ++.|.+++|+|+|++. .++++.|||++.+.+.++.....+||||||+
T Consensus 68 ------------~~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 125 (324)
T 1am5_A 68 ------------GKTVDLTYGTG--GMRGILGQDTVSVGGG--------SDPNQELGESQTEPGPFQAAAPFDGILGLAY 125 (324)
T ss_dssp ------------EEEEEEECSSC--EEEEEEEEEEEESSSS--------CEEEEEEEEEEECCSTTTTTCSSSEEEECSC
T ss_pred ------------CcEEEEEECCC--CeEEEEEECceeECCc--------EEcccEEEEEEecccccccCCCCceEEecCC
Confidence 48999999997 5699999999999875 5689999999998876555557799999999
Q ss_pred CCCCh------hHHHHhhcCC-cCcEEEEecCC--CCceEEeCcCCCCCc-eeeeeeecCCCCccEEEeEeeEEecCeEe
Q 013680 259 GDVSV------PSLLAKAGLI-QNSFSICFDEN--DSGSVFFGDQGPATQ-QSTSFLPIGEKYDAYFVGVESYCIGNSCL 328 (438)
Q Consensus 259 ~~~S~------~~qL~~~g~i-~~~FS~cL~~~--~~G~l~fG~~d~~~~-~~~p~v~~~~~~~~y~v~l~~i~vg~~~~ 328 (438)
..++. ..+|+++|++ +++||+||.++ ..|.|+||++|+.+. +++.|+|+... .+|.|.|++|+||++.+
T Consensus 126 ~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~ 204 (324)
T 1am5_A 126 PSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAE-KYWQVALDGITVNGQTA 204 (324)
T ss_dssp GGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEE-TTEEEEECEEEETTEEC
T ss_pred ccccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCC-cEEEEEEeEEEECCcee
Confidence 87664 5569999998 89999999875 479999999998763 56677776554 79999999999999876
Q ss_pred ecCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEEEeccee
Q 013680 329 TQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIF 408 (438)
Q Consensus 329 ~~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~l~~~~y 408 (438)
......+||||||++++||+++|++|.+++... ...+ .|.++|.....+|+|+|+| +|.++.|++++|
T Consensus 205 ~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-----~~~g------~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~y 272 (324)
T 1am5_A 205 ACEGCQAIVDTGTSKIVAPVSALANIMKDIGAS-----ENQG------EMMGNCASVQSLPDITFTI-NGVKQPLPPSAY 272 (324)
T ss_dssp CCCCEEEEECTTCSSEEECTTTHHHHHHHHTCE-----ECCC------CEECCTTSSSSSCCEEEEE-TTEEEEECHHHH
T ss_pred eccCceEEEecCCccEECCHHHHHHHHHHhCCc-----ccCC------cEEEeCCCcccCCcEEEEE-CCEEEEECHHHh
Confidence 433478999999999999999998888766432 1111 2778887767899999999 889999999999
Q ss_pred EEeeCCCCceEEEEEEE
Q 013680 409 SFPENEVGDHACFSYFT 425 (438)
Q Consensus 409 ~~~~~~~~~~~Cl~~~~ 425 (438)
+++. ...|+..+.
T Consensus 273 ~~~~----~~~C~~~~~ 285 (324)
T 1am5_A 273 IEGD----QAFCTSGLG 285 (324)
T ss_dssp EEES----SSCEEECEE
T ss_pred cccC----CCeEEEEEE
Confidence 9986 247996544
No 8
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=5.6e-48 Score=381.04 Aligned_cols=268 Identities=24% Similarity=0.440 Sum_probs=222.0
Q ss_pred ccccceEEEEEEeCCCCeEEEEEEECCCCceeEecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCCCC
Q 013680 104 NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSR 182 (438)
Q Consensus 104 ~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~~~ 182 (438)
+..+..|+++|.||||+|+|.|++||||+++||+|. |..| .+ .++.|+|++|+|++..
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~----------~~~~y~~~~SsT~~~~---------- 69 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GS----------GQTKYDPNQSSTYQAD---------- 69 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CT----------TSCCBCGGGCTTCEEE----------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hc----------CCCCCCcccCCCeeeC----------
Confidence 456788999999999999999999999999999997 7777 11 3589999999999983
Q ss_pred CCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecCCCCCC
Q 013680 183 SSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS 262 (438)
Q Consensus 183 ~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~~S 262 (438)
.|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||++.+.+.|... ..+||||||+..++
T Consensus 70 --------~~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~f~~~-~~~GilGLg~~~~s 131 (325)
T 2apr_A 70 --------GRTWSISYGDG-SSASGILAKDNVNLGGL--------LIKGQTIELAKREAASFASG-PNDGLLGLGFDTIT 131 (325)
T ss_dssp --------EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTS-SCSEEEECSCGGGC
T ss_pred --------CCEEEEEECCC-CCEEEEEEEEEEEECCE--------EECcEEEEEEeccCcccccC-CCceEEEeCCcccc
Confidence 48999999996 66899999999999875 56899999999887654432 47999999998765
Q ss_pred -------hhHHHHhhcCC-cCcEEEEecC---CCCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEEecCeEeec
Q 013680 263 -------VPSLLAKAGLI-QNSFSICFDE---NDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQ 330 (438)
Q Consensus 263 -------~~~qL~~~g~i-~~~FS~cL~~---~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vg~~~~~~ 330 (438)
++.+|+++|++ +++||+||.+ ...|.|+||++|+.+ .+++.|+|+.....+|.|.+++|+||+ .+..
T Consensus 132 ~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~~~ 210 (325)
T 2apr_A 132 TVRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-STVA 210 (325)
T ss_dssp SSTTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EEEE
T ss_pred cccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-EecC
Confidence 45779999988 8999999954 457999999999876 467778887544579999999999999 4544
Q ss_pred CCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEEEecceeEE
Q 013680 331 SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSF 410 (438)
Q Consensus 331 ~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~l~~~~y~~ 410 (438)
..+.+||||||++++||+++|++++++|.+++... + -|.++|.. ..+|+|+|+| +|.++.|++++|++
T Consensus 211 ~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~----g------~~~~~C~~-~~~p~i~f~f-~g~~~~ip~~~~~~ 278 (325)
T 2apr_A 211 SSFDGILDTGTTLLILPNNIAASVARAYGASDNGD----G------TYTISCDT-SAFKPLVFSI-NGASFQVSPDSLVF 278 (325)
T ss_dssp CCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS----S------CEEECSCG-GGCCCEEEEE-TTEEEEECGGGGEE
T ss_pred CCceEEEecCCccEECCHHHHHHHHHHHhcccCCC----C------eEEEECCC-CCCCcEEEEE-CCEEEEECHHHEEE
Confidence 67789999999999999999999999887765432 1 16677864 3589999999 55699999999988
Q ss_pred eeCCCCceEEEEEEEc
Q 013680 411 PENEVGDHACFSYFTL 426 (438)
Q Consensus 411 ~~~~~~~~~Cl~~~~~ 426 (438)
+.. ...|++++..
T Consensus 279 ~~~---~~~C~~~i~~ 291 (325)
T 2apr_A 279 EEF---QGQCIAGFGY 291 (325)
T ss_dssp EEE---TTEEEESEEE
T ss_pred cCC---CCeEEEEEEc
Confidence 753 3589987654
No 9
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=5.3e-48 Score=395.23 Aligned_cols=286 Identities=17% Similarity=0.276 Sum_probs=228.7
Q ss_pred ceeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCc
Q 013680 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHP 177 (438)
Q Consensus 98 ~~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~ 177 (438)
..+++.++.+..|+++|.||||||++.|++||||+++||+|. .|....|. .++.|||++|+|++..
T Consensus 128 ~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~--~C~~~~C~-------~~~~ydps~SsT~~~~----- 193 (453)
T 2bju_A 128 DNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSV--KCTTAGCL-------TKHLYDSSKSRTYEKD----- 193 (453)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSTTGG-------GSCCBCGGGCTTCEEE-----
T ss_pred CceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEecc--CCCccccC-------CCCcCCCccCCceeEC-----
Confidence 457888888999999999999999999999999999999995 44433332 3689999999999985
Q ss_pred CCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEecc--CCCCCCCCCceEee
Q 013680 178 LCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQT--GSYLDGAAPDGVMG 255 (438)
Q Consensus 178 ~C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~--g~~~~~~~~dGIlG 255 (438)
.|.|.+.|++| ++.|.+++|+|+|++. .++ +.|||++.+. |.++.....|||||
T Consensus 194 -------------~~~~~i~YgdG--s~~G~~~~Dtv~ig~~--------~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlG 249 (453)
T 2bju_A 194 -------------GTKVEMNYVSG--TVSGFFSKDLVTVGNL--------SLP-YKFIEVIDTNGFEPTYTASTFDGILG 249 (453)
T ss_dssp -------------EEEEEEECSSS--EEEEEEEEEEEEETTE--------EEE-EEEEEEEECGGGTTHHHHSSCCEEEE
T ss_pred -------------CcEEEEEcCCC--CeEEEEEEEEEEEeCc--------EEE-EEEEEEEEecccCccccccCCceeEe
Confidence 48999999997 5899999999999875 457 9999999987 65443346799999
Q ss_pred cCCCCCCh------hHHHHhhcCC-cCcEEEEecCC--CCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEEecC
Q 013680 256 LGLGDVSV------PSLLAKAGLI-QNSFSICFDEN--DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGN 325 (438)
Q Consensus 256 Lg~~~~S~------~~qL~~~g~i-~~~FS~cL~~~--~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vg~ 325 (438)
||++.++. ..+|+++|++ +++||+||.++ ..|.|+||++|+.+ .+++.|+|+... .+|.|.++ |+||+
T Consensus 250 Lg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~-~~w~V~l~-I~Vgg 327 (453)
T 2bju_A 250 LGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHD-LYWQITLD-AHVGN 327 (453)
T ss_dssp CSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEE-TTEEEEEE-EEETT
T ss_pred ccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCC-ceEEEEEE-EEECc
Confidence 99987654 4679999999 79999999985 57999999999877 467888887654 79999999 99999
Q ss_pred eEeecCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEEEec
Q 013680 326 SCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRN 405 (438)
Q Consensus 326 ~~~~~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~l~~ 405 (438)
+ +. ....+||||||++++||+++|++|.+++ ++.....+ .+|.++|.. ..+|+|+|+| ||..+.|++
T Consensus 328 ~-~~-~~~~aIiDSGTsl~~lP~~~~~~l~~~i----~~~~~~~g-----~~~~v~C~~-~~~P~itf~f-gg~~~~l~~ 394 (453)
T 2bju_A 328 I-ML-EKANCIVDSGTSAITVPTDFLNKMLQNL----DVIKVPFL-----PFYVTLCNN-SKLPTFEFTS-ENGKYTLEP 394 (453)
T ss_dssp E-EE-EEEEEEECTTCCSEEECHHHHHHHTTTS----SCEECTTS-----SCEEEETTC-TTCCCEEEEC-SSCEEEECH
T ss_pred E-Ee-ccccEEEcCCCCeEecCHHHHHHHHHHh----CCcccCCC-----ceEEEecCC-CCCCcEEEEE-CCEEEEECH
Confidence 4 33 5678999999999999999988876544 43321111 147888876 6789999999 889999999
Q ss_pred ceeEEeeCCCCceEEEEEEEcCCCceeEEEe
Q 013680 406 HIFSFPENEVGDHACFSYFTLEYNFTGILIL 436 (438)
Q Consensus 406 ~~y~~~~~~~~~~~Cl~~~~~~~~~~g~~il 436 (438)
++|+++..++....|+..+...+...+.|||
T Consensus 395 ~~yi~~~~~~g~~~C~~~~~~~~~~~~~~IL 425 (453)
T 2bju_A 395 EYYLQHIEDVGPGLCMLNIIGLDFPVPTFIL 425 (453)
T ss_dssp HHHEEECTTTSTTEEEECEEECCCSSCEEEE
T ss_pred HHhEeecccCCCceEEEEEEeCCCCCCCEEE
Confidence 9999987532246899655443322335665
No 10
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=5.1e-48 Score=380.97 Aligned_cols=274 Identities=21% Similarity=0.365 Sum_probs=226.6
Q ss_pred eeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcC
Q 013680 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPL 178 (438)
Q Consensus 99 ~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~ 178 (438)
.++|.|+.+..|+++|.||||+|++.|++||||+++||+|. .|....|. .++.|||++|+|++..
T Consensus 5 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~~------ 69 (323)
T 3cms_A 5 SVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSI--YCKSNACK-------NHQRFDPRKSSTFQNL------ 69 (323)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSHHHH-------TSCCBCGGGCTTCEEE------
T ss_pred eeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCC--CCCccccc-------CCCCCCCccCCCeEEC------
Confidence 46788888999999999999999999999999999999994 45433332 3578999999999985
Q ss_pred CCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecCC
Q 013680 179 CKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGL 258 (438)
Q Consensus 179 C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~ 258 (438)
.|.|.+.|++| ++.|.+++|+|+|++. .++++.|||++.+.+..+.....+||||||+
T Consensus 70 ------------~~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 127 (323)
T 3cms_A 70 ------------GKPLSIHYGTG--SMQGILGYDTVTVSNI--------VDIQQTVGLSTQEPGDFFTYAEFDGILGMAY 127 (323)
T ss_dssp ------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHHHHSSCSEEEECSC
T ss_pred ------------CcEEEEEeCCC--CeEEEEEEEEEEECCe--------EEeccEEEEEEecccccccccCCceEEecCc
Confidence 48999999997 5899999999999875 5689999999998764332235699999999
Q ss_pred CCCCh------hHHHHhhcCC-cCcEEEEecCC-CCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEEecCeEee
Q 013680 259 GDVSV------PSLLAKAGLI-QNSFSICFDEN-DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCLT 329 (438)
Q Consensus 259 ~~~S~------~~qL~~~g~i-~~~FS~cL~~~-~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vg~~~~~ 329 (438)
+.++. ..+|+++|++ +++||+||.++ ..|.|+||++|+.+ .+++.|+|+... .+|.|.|++|+||++.+.
T Consensus 128 ~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~~ 206 (323)
T 3cms_A 128 PSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTVQ-QYWQFTVDSVTISGVVVA 206 (323)
T ss_dssp GGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSSB-TTBEEEEEEEEETTEEEE
T ss_pred chhhccCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECccC-CeEEEEEeeEEECCEEee
Confidence 87653 5679999998 89999999875 45999999999887 468888888765 799999999999999875
Q ss_pred -cCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEEEeccee
Q 013680 330 -QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIF 408 (438)
Q Consensus 330 -~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~l~~~~y 408 (438)
.....+||||||++++||+++|++|.+++. +..... ..|.++|.....+|+|+|+| +|.++.|++++|
T Consensus 207 ~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~----~~~~~~------g~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~y 275 (323)
T 3cms_A 207 CEGGCQAILDTGTSKLVGPSSDILNIQQAIG----ATQNQY------GEFDIDCDNLSYMPTVVFEI-NGKMYPLTPSAY 275 (323)
T ss_dssp STTCEEEEECTTCCSEEECHHHHHHHHHHHT----CEEETT------TEEEECTTCTTTSCCEEEEE-TTEEEEECHHHH
T ss_pred cCCCcEEEEecCCccEeCCHHHHHHHHHHhC----CeecCC------CcEEEECCCCccCceEEEEE-CCEEEEECHHHh
Confidence 356789999999999999999888876653 322211 23778887777899999999 889999999999
Q ss_pred EEeeCCCCceEEEEEEE
Q 013680 409 SFPENEVGDHACFSYFT 425 (438)
Q Consensus 409 ~~~~~~~~~~~Cl~~~~ 425 (438)
+++. ...|+..+.
T Consensus 276 ~~~~----~~~C~~~i~ 288 (323)
T 3cms_A 276 TSQD----QGFCTSGFQ 288 (323)
T ss_dssp EEEE----TTEEEESEE
T ss_pred ccCC----CCEEEEEEE
Confidence 9982 458997444
No 11
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=7.5e-48 Score=382.46 Aligned_cols=281 Identities=22% Similarity=0.377 Sum_probs=231.7
Q ss_pred CCceeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccC
Q 013680 96 GSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSC 174 (438)
Q Consensus 96 ~~~~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C 174 (438)
+...++|.|+.+.+||++|.||||||++.|++||||+++||+|. |..| ...| ..++.|+|++|+|++..
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~-~~~C-------~~~~~y~~~~SsT~~~~-- 75 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRL-YTAC-------VYHKLFDASDSSSYKHN-- 75 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTT-CHHH-------HTSCCBCGGGCTTCEEE--
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCC-CCcc-------cCCCCCCCCcCcCeeEC--
Confidence 34568899999999999999999999999999999999999995 5421 1122 24689999999999984
Q ss_pred CCcCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEe
Q 013680 175 SHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVM 254 (438)
Q Consensus 175 ~~~~C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIl 254 (438)
.|.|.+.|++| ++.|.+++|+|+|++. .+ ++.|||++...+..+.....+|||
T Consensus 76 ----------------~~~~~i~Yg~g--s~~G~~~~D~v~ig~~--------~v-~~~fg~~~~~~~~~~~~~~~~Gil 128 (341)
T 3k1w_A 76 ----------------GTELTLRYSTG--TVSGFLSQDIITVGGI--------TV-TQMFGEVTEMPALPFMLAEFDGVV 128 (341)
T ss_dssp ----------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EE-EEEEEEEEECCHHHHTTCSSSEEE
T ss_pred ----------------CCEEEEEECCc--EEEEEEEEEEEEECCc--------ee-eEEEEEEEEccccccccCCcceEE
Confidence 48999999997 5899999999999875 45 999999999876533444679999
Q ss_pred ecCCCCCC------hhHHHHhhcCC-cCcEEEEecCCC------CceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEee
Q 013680 255 GLGLGDVS------VPSLLAKAGLI-QNSFSICFDEND------SGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVES 320 (438)
Q Consensus 255 GLg~~~~S------~~~qL~~~g~i-~~~FS~cL~~~~------~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~ 320 (438)
|||++.++ ++.+|+++|++ +++||+||.++. .|.|+||++|+.+ .+++.|+|+... .+|.|.+++
T Consensus 129 GLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~ 207 (341)
T 3k1w_A 129 GMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT-GVWQIQMKG 207 (341)
T ss_dssp ECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSST-TSCEEEECC
T ss_pred ECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCC-CEEEEEEeE
Confidence 99998876 46679999999 899999998764 7999999999987 478888888765 899999999
Q ss_pred EEecCeEee-cCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCc
Q 013680 321 YCIGNSCLT-QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQ 399 (438)
Q Consensus 321 i~vg~~~~~-~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~ 399 (438)
|+||++.+. .....+||||||++++||+++|++|.+++. +.... . . |.++|.....+|+|+|+| +|.
T Consensus 208 i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~----~~~~~--~---g--~~~~C~~~~~~p~i~f~f-~g~ 275 (341)
T 3k1w_A 208 VSVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALG----AKKRL--F---D--YVVKCNEGPTLPDISFHL-GGK 275 (341)
T ss_dssp EEETTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHT----CEECS--S---C--EEEEGGGGGGCCCEEEEE-TTE
T ss_pred EEECCEEeecCCCCEEEEECCCChhcCCHHHHHHHHHHcC----CeecC--C---C--eEEeCCCCCcCCcEEEEE-CCE
Confidence 999999653 456789999999999999999888876653 33211 1 1 788998777899999999 789
Q ss_pred EEEEecceeEEeeCCCCceEEEEEEEc
Q 013680 400 SFVVRNHIFSFPENEVGDHACFSYFTL 426 (438)
Q Consensus 400 ~~~l~~~~y~~~~~~~~~~~Cl~~~~~ 426 (438)
++.|++++|++...+.....|+..+..
T Consensus 276 ~~~l~~~~~~~~~~~~~~~~C~~~i~~ 302 (341)
T 3k1w_A 276 EYTLTSADYVFQESYSSKKLCTLAIHA 302 (341)
T ss_dssp EEEECHHHHBCCSCCCTTSEEEBSEEE
T ss_pred EEEECHHHheeEccCCCCCeEEeEEEe
Confidence 999999999988654335689965543
No 12
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.1e-47 Score=377.99 Aligned_cols=273 Identities=22% Similarity=0.384 Sum_probs=224.5
Q ss_pred eeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCC
Q 013680 100 HFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLC 179 (438)
Q Consensus 100 ~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C 179 (438)
++|.|+.+..|+++|.||||||++.|++||||+++||+|. .|....|. .++.|+|++|+|++..
T Consensus 3 ~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~~------- 66 (320)
T 4aa9_A 3 EPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSI--YCKSNVCK-------NHHRFDPRKSSTFRNL------- 66 (320)
T ss_dssp -----CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSHHHH-------TSCCBCGGGCTTCEEE-------
T ss_pred ccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCC--CCCccccC-------CCCCCCCCCCcCeEcC-------
Confidence 5688899999999999999999999999999999999994 45433332 3689999999999985
Q ss_pred CCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecCCC
Q 013680 180 KSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLG 259 (438)
Q Consensus 180 ~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~ 259 (438)
.|.|.+.|++| ++.|.+++|+|+|++. .++++.|||++...+..+.....+||||||++
T Consensus 67 -----------~~~~~i~Yg~g--s~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~ 125 (320)
T 4aa9_A 67 -----------GKPLSIHYGTG--SMEGFLGYDTVTVSNI--------VDPNQTVGLSTEQPGEVFTYSEFDGILGLAYP 125 (320)
T ss_dssp -----------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHHHSCCCSEEEECSCG
T ss_pred -----------CcEEEEEECCc--EEEEEEEEEEEEECCE--------eecCeEEEEEEEcccccccccCcccEEecCcc
Confidence 48999999997 5899999999999975 56899999999988744444467999999997
Q ss_pred CCC------hhHHHHhhcCC-cCcEEEEecCC-CCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEEecCeEeec
Q 013680 260 DVS------VPSLLAKAGLI-QNSFSICFDEN-DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQ 330 (438)
Q Consensus 260 ~~S------~~~qL~~~g~i-~~~FS~cL~~~-~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vg~~~~~~ 330 (438)
.++ +..+|+++|+| +++||+||.++ ..|.|+||++|+.+ .+++.|+|+... .+|.|.+++|+|+++.+..
T Consensus 126 ~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i~v~~~~~~~ 204 (320)
T 4aa9_A 126 SLASEYSVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTLQ-QYWQFTVDSVTINGVAVAC 204 (320)
T ss_dssp GGSCTTCCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSSB-TTBEEEECEEEETTEEEES
T ss_pred cccccCCCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcccC-CceEEEEeEEEECCEEecc
Confidence 655 45679999999 89999999985 68999999999987 478889888765 8999999999999998763
Q ss_pred -CCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEEEecceeE
Q 013680 331 -SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFS 409 (438)
Q Consensus 331 -~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~l~~~~y~ 409 (438)
....+||||||++++||+++|++|.+++ ++.... ...|.++|.....+|+|+|+| +|.++.|++++|+
T Consensus 205 ~~~~~~iiDsGtt~~~lP~~~~~~i~~~~----~~~~~~------~g~~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y~ 273 (320)
T 4aa9_A 205 VGGCQAILDTGTSVLFGPSSDILKIQMAI----GATENR------YGEFDVNCGNLRSMPTVVFEI-NGRDYPLSPSAYT 273 (320)
T ss_dssp TTCEEEEECTTCSSEEEEHHHHHHHHHHT----TCEECT------TSCEEECGGGGGGCCCEEEEE-TTEEEEECHHHHE
T ss_pred CCCcEEEEECCCCcEECCHHHHHHHHHHh----CCcccC------CCcEEEeCCCCCcCceEEEEE-CCEEEEECHHHhc
Confidence 4578999999999999999988887655 333221 123888998777899999999 8899999999999
Q ss_pred EeeCCCCceEEEEEEE
Q 013680 410 FPENEVGDHACFSYFT 425 (438)
Q Consensus 410 ~~~~~~~~~~Cl~~~~ 425 (438)
.+. ...|+..+.
T Consensus 274 ~~~----~~~C~~~i~ 285 (320)
T 4aa9_A 274 SKD----QGFCTSGFQ 285 (320)
T ss_dssp EEE----TTEEEESEE
T ss_pred cCC----CCeEEEEEE
Confidence 774 358996444
No 13
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=2.2e-47 Score=377.36 Aligned_cols=272 Identities=23% Similarity=0.403 Sum_probs=224.7
Q ss_pred eeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCC
Q 013680 100 HFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLC 179 (438)
Q Consensus 100 ~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C 179 (438)
++|. +.+..|+++|.||||+|++.|++||||+++||+|. .|.+..|. .++.|||++|+|++..
T Consensus 5 ~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~~------- 67 (329)
T 1htr_B 5 EPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSV--YCQSQACT-------SHSRFNPSESSTYSTN------- 67 (329)
T ss_dssp CGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSHHHH-------TSCCBCGGGCTTCEEE-------
T ss_pred eeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC--CCCCcccC-------CCCcCCCccCCCeEEC-------
Confidence 4566 77889999999999999999999999999999994 44332332 3578999999999985
Q ss_pred CCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecCCC
Q 013680 180 KSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLG 259 (438)
Q Consensus 180 ~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~ 259 (438)
.|.|.+.|++| ++.|.+++|+|+|++. .++++.|||++.+.+.++.....+||||||+.
T Consensus 68 -----------~~~~~i~Yg~g--s~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~ 126 (329)
T 1htr_B 68 -----------GQTFSLQYGSG--SLTGFFGYDTLTVQSI--------QVPNQEFGLSENEPGTNFVYAQFDGIMGLAYP 126 (329)
T ss_dssp -----------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEESSCSSGGGGGCSCCEEEECCCC
T ss_pred -----------CcEEEEEeCCC--CeEEEEEeeeEEEcce--------EECceEEEEEEEccccccccCCCceEEecCCC
Confidence 48999999997 5699999999999875 56899999999887755544567999999998
Q ss_pred CCCh------hHHHHhhcCC-cCcEEEEecCCC---CceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEEecCeEe
Q 013680 260 DVSV------PSLLAKAGLI-QNSFSICFDEND---SGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCL 328 (438)
Q Consensus 260 ~~S~------~~qL~~~g~i-~~~FS~cL~~~~---~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vg~~~~ 328 (438)
.++. ..+|+++|++ +++||+||.++. .|.|+||++|+.+ .+++.|+|+... .+|.|.|++|+||++.+
T Consensus 127 ~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~ 205 (329)
T 1htr_B 127 ALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQE-LYWQIGIEEFLIGGQAS 205 (329)
T ss_dssp SCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSS-SSCEEEECEEEETTEEC
T ss_pred cccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCC-ceEEEEEeEEEECCcee
Confidence 8764 5679999998 899999998864 7999999999887 468888888765 79999999999999876
Q ss_pred e--cCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEEEecc
Q 013680 329 T--QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNH 406 (438)
Q Consensus 329 ~--~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~l~~~ 406 (438)
. .....+||||||++++||+++|++|.+++.. .....+ -|.++|.....+|+|+|+| +|.++.|+++
T Consensus 206 ~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~----~~~~~g------~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~ 274 (329)
T 1htr_B 206 GWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGA----QEDEYG------QFLVNCNSIQNLPSLTFII-NGVEFPLPPS 274 (329)
T ss_dssp CTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTC----EECTTS------CEEECGGGGGGSCCEEEEE-TTEEEEECHH
T ss_pred eecCCCceEEEecCCccEECCHHHHHHHHHHhCC----eecCCC------eEEEeCCCcccCCcEEEEE-CCEEEEECHH
Confidence 4 3567899999999999999999988876643 222111 1677887767899999999 8899999999
Q ss_pred eeEEeeCCCCceEEEEEEE
Q 013680 407 IFSFPENEVGDHACFSYFT 425 (438)
Q Consensus 407 ~y~~~~~~~~~~~Cl~~~~ 425 (438)
+|+++.. + .|+..+.
T Consensus 275 ~y~~~~~---g-~C~~~~~ 289 (329)
T 1htr_B 275 SYILSNN---G-YCTVGVE 289 (329)
T ss_dssp HHEEECS---S-CEEESEE
T ss_pred HhcccCC---C-EEEEEEE
Confidence 9999864 2 8995443
No 14
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=7.6e-48 Score=380.69 Aligned_cols=275 Identities=19% Similarity=0.313 Sum_probs=220.1
Q ss_pred ccccceEEEEEEeCCCCeEEEEEEECCCCceeEecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCCCC
Q 013680 104 NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSR 182 (438)
Q Consensus 104 ~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~~~ 182 (438)
.+.+..|+++|.||||+|+|.|++||||+++||+|. |..|.. ..++.|+|++|+|++.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~----------~~~~~y~~~~SsT~~~~~--------- 71 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSA----------TGHAIYTPSKSSTSKKVS--------- 71 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHH----------TTSCCBCGGGCTTCEECT---------
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCcccc----------CCCCcCCcccCcCceEcC---------
Confidence 455778999999999999999999999999999996 665531 236899999999999864
Q ss_pred CCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecCCCCCC
Q 013680 183 SSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS 262 (438)
Q Consensus 183 ~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~~S 262 (438)
.|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||++.+.+.+......+||||||+..++
T Consensus 72 --------~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s 134 (329)
T 3c9x_A 72 --------GASWSISYGDG-SSSSGDVYTDKVTIGGF--------SVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGN 134 (329)
T ss_dssp --------TCBEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGC
T ss_pred --------CCeEEEEeCCC-CcEEEEEEEEEEEECCE--------EEcceEEEEEEecCccccccCCCceeEEeCccccc
Confidence 48999999996 56899999999999875 56899999999987765433467999999998766
Q ss_pred h---------hHHHHhhcCCcCcEEEEecCCCCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEEecCeEeecCC
Q 013680 263 V---------PSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSG 332 (438)
Q Consensus 263 ~---------~~qL~~~g~i~~~FS~cL~~~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vg~~~~~~~~ 332 (438)
. ..+|+++ +.+++||+||.++..|.|+||++|+.+ .+++.|+|+.....+|.|.|++|+||++.+....
T Consensus 135 ~~~~~~~~~~~~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~ 213 (329)
T 3c9x_A 135 QVRPHPQKTWFSNAASS-LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLNRNS 213 (329)
T ss_dssp CCBSSCCCCHHHHHHTT-SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCCSCC
T ss_pred ccCCCCCCCHHHHHHHh-cCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEeccCCC
Confidence 4 4457765 338999999998778999999999876 4677788876444799999999999998886567
Q ss_pred cceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEEEecceeEEee
Q 013680 333 FQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPE 412 (438)
Q Consensus 333 ~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~l~~~~y~~~~ 412 (438)
+.+||||||++++||+++|++|.++|. ++...... .-|.++|. ..+|+|+|+| +|.++.|++++|++..
T Consensus 214 ~~aiiDSGTt~~~lp~~~~~~i~~~i~---~a~~~~~~-----~~~~~~C~--~~~P~i~f~f-~g~~~~ip~~~~~~~~ 282 (329)
T 3c9x_A 214 IDGIADTGTTLLLLDDNVVDAYYANVQ---SAQYDNQQ-----EGVVFDCD--EDLPSFSFGV-GSSTITIPGDLLNLTP 282 (329)
T ss_dssp EEEEECTTCCSEEECHHHHHHHHTTCT---TCEEETTT-----TEEEEETT--CCCCCEEEEE-TTEEEEECGGGGEEEE
T ss_pred ceEEEECCCCcEeCCHHHHHHHHHhCC---CcEEcCCC-----CEEEEECC--CCCCcEEEEE-CCEEEEECHHHeeeec
Confidence 889999999999999999877764442 22211111 11667887 4689999999 7899999999998876
Q ss_pred CCCCceEEEEEEEc
Q 013680 413 NEVGDHACFSYFTL 426 (438)
Q Consensus 413 ~~~~~~~Cl~~~~~ 426 (438)
.+.....|++.+..
T Consensus 283 ~~~~~~~C~~~i~~ 296 (329)
T 3c9x_A 283 LEEGSSTCFGGLQS 296 (329)
T ss_dssp SSTTCSEEEESEEE
T ss_pred cCCCCCeEEEEEEc
Confidence 33224689986553
No 15
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=4.4e-47 Score=379.93 Aligned_cols=278 Identities=22% Similarity=0.282 Sum_probs=225.8
Q ss_pred eeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecC-CC---CCCCCCcccccccCCCCCCCCCCCCCCCccccC
Q 013680 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI---QCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSC 174 (438)
Q Consensus 99 ~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~-C~---~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C 174 (438)
.+++.++.+..|+++|.||||+|+|.|++||||+++||+|. |. .|. .++.|+|++|+|++..
T Consensus 9 ~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~------------~~~~y~~~~SsT~~~~-- 74 (361)
T 1mpp_A 9 TPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCV------------GKRFFDPSSSSTFKET-- 74 (361)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCC------------SSCCBCGGGCTTCEEE--
T ss_pred eEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCC------------CCCcCCCccCCceEec--
Confidence 46788888999999999999999999999999999999996 55 343 3578999999999985
Q ss_pred CCcCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccC-----CCCCCCC
Q 013680 175 SHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTG-----SYLDGAA 249 (438)
Q Consensus 175 ~~~~C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g-----~~~~~~~ 249 (438)
.|.|.+.|++| ++.|.+++|+|+|++. .++++.|||++.+.+ .++....
T Consensus 75 ----------------~~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~~~~~~~~~~ 128 (361)
T 1mpp_A 75 ----------------DYNLNITYGTG--GANGIYFRDSITVGGA--------TVKQQTLAYVDNVSGPTAEQSPDSELF 128 (361)
T ss_dssp ----------------EEEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEEESGGGSSCTTCSSC
T ss_pred ----------------CCeEEEEECCc--eEEEEEEEEEEEECCE--------EEeceEEEEEEeccCccccccccccCC
Confidence 48999999997 4899999999999875 568999999999877 4454456
Q ss_pred CceEeecCCCCCCh------------hHHHHhhcCC-cCcEEEEecCC-CCceEEeCcCCCCCc-eeeeeeecCCCCc--
Q 013680 250 PDGVMGLGLGDVSV------------PSLLAKAGLI-QNSFSICFDEN-DSGSVFFGDQGPATQ-QSTSFLPIGEKYD-- 312 (438)
Q Consensus 250 ~dGIlGLg~~~~S~------------~~qL~~~g~i-~~~FS~cL~~~-~~G~l~fG~~d~~~~-~~~p~v~~~~~~~-- 312 (438)
.+||||||++.++. +.+|+++|++ +++||+||.++ ..|.|+||++|+.+. +++.|+|+.....
T Consensus 129 ~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~ 208 (361)
T 1mpp_A 129 LDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGY 208 (361)
T ss_dssp CCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEE
T ss_pred CCCEEEeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCce
Confidence 79999999987664 3469999998 79999999985 579999999998763 5556665544322
Q ss_pred -cEEEeEeeEEecCeEee-cCCcceE-EcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCC-
Q 013680 313 -AYFVGVESYCIGNSCLT-QSGFQAL-VDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKV- 388 (438)
Q Consensus 313 -~y~v~l~~i~vg~~~~~-~~~~~ai-iDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~- 388 (438)
+|.|.|++|+|+++.+. .....+| |||||++++||+++|++|.++|..... .. ...|.++|.....+
T Consensus 209 ~~~~v~l~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~---~~------~g~~~~~C~~~~~~~ 279 (361)
T 1mpp_A 209 FFWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT---ES------QQGYTVPCSKYQDSK 279 (361)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE---EE------TTEEEEEHHHHTTCC
T ss_pred eEEEEEEeEEEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc---CC------CCcEEEECCCcccCC
Confidence 89999999999998873 3457899 999999999999999998877654321 11 12367788766677
Q ss_pred CeEEEEEc-C-----CcEEEEecceeEEeeCCCCceEEE-EEEEc
Q 013680 389 PDMRLIFS-K-----NQSFVVRNHIFSFPENEVGDHACF-SYFTL 426 (438)
Q Consensus 389 P~it~~f~-g-----g~~~~l~~~~y~~~~~~~~~~~Cl-~~~~~ 426 (438)
|+|+|+|. | |.++.|++++|+++..++ ...|+ ++...
T Consensus 280 p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~-~~~C~~~i~~~ 323 (361)
T 1mpp_A 280 TTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKS-GETCMFIVLPD 323 (361)
T ss_dssp CEEEEEEECTTCSSCEEEEEEEGGGGEEECSSS-SCEEEESEEEE
T ss_pred CcEEEEEEcCCcCCCCeEEEECHHHhEEecCCC-CCeeEEEEEeC
Confidence 99999994 4 789999999999986532 46898 55543
No 16
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=3.8e-47 Score=375.73 Aligned_cols=273 Identities=19% Similarity=0.321 Sum_probs=219.4
Q ss_pred cccceEEEEEEeCCCCeEEEEEEECCCCceeEecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCCCCC
Q 013680 105 QFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRS 183 (438)
Q Consensus 105 ~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~ 183 (438)
..+..|+++|.||||+|+|.|++||||+++||+|. |..|.. .++.|+|++|+|++.++
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-----------~~~~y~~~~SsT~~~~~---------- 70 (329)
T 1oew_A 12 SLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-----------XQTIYTPSKSTTAKLLS---------- 70 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC------------CCCBCGGGCTTCEEEE----------
T ss_pred CCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-----------ccCccCCccCccceecC----------
Confidence 35678999999999999999999999999999996 766632 25899999999999864
Q ss_pred CCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecCCCCCCh
Q 013680 184 SCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSV 263 (438)
Q Consensus 184 ~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~~S~ 263 (438)
.|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||++.+.+.+......+||||||+..++.
T Consensus 71 -------~~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~ 134 (329)
T 1oew_A 71 -------GATWSISYGDG-SSSSGDVYTDTVSVGGL--------TVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNT 134 (329)
T ss_dssp -------EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCC
T ss_pred -------CCeEEEEeCCC-CcEEEEEEEEEEEECCE--------EEeeeEEEEEEecCccccccCCCceEEEeccccccc
Confidence 38999999996 56899999999999875 568999999999877654434679999999987664
Q ss_pred ---------hHHHHhhcCCcCcEEEEecCCCCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEEecCeEeecCCc
Q 013680 264 ---------PSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGF 333 (438)
Q Consensus 264 ---------~~qL~~~g~i~~~FS~cL~~~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vg~~~~~~~~~ 333 (438)
..+|+++ +-+++||+||.++..|.|+||++|+.+ .+++.|+|+.....+|.|.|++|+||++.+.....
T Consensus 135 ~~~~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~ 213 (329)
T 1oew_A 135 VSPTQQKTFFDNAKAS-LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSI 213 (329)
T ss_dssp CBSSCCCCHHHHHTTT-SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCEEEEE
T ss_pred cCcCCCCCHHHHHHHh-ccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeeccCCCc
Confidence 3567765 338999999998778999999999977 46777777764457999999999999987765667
Q ss_pred ceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEEEecceeEEeeC
Q 013680 334 QALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPEN 413 (438)
Q Consensus 334 ~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~l~~~~y~~~~~ 413 (438)
.+||||||++++||+++|++|.++|. ++.... . ..-|.++|. ..+|+|+|+| ||.++.|++++|++...
T Consensus 214 ~aiiDSGTt~~~lP~~~~~~l~~~i~---~a~~~~-~----~g~~~~~C~--~~~P~i~f~f-gg~~~~ip~~~~~~~~~ 282 (329)
T 1oew_A 214 DGIADTGTTLLYLPATVVSAYWAQVS---GAKSSS-S----VGGYVFPCS--ATLPSFTFGV-GSARIVIPGDYIDFGPI 282 (329)
T ss_dssp EEEECTTCCSEEECHHHHHHHHTTST---TCEEET-T----TTEEEEETT--CCCCCEEEEE-TTEEEEECHHHHEEEES
T ss_pred eEEEeCCCCCEECCHHHHHHHHHhCC---CcEEcC-C----CCEEEEECC--CCCCcEEEEE-CCEEEEECHHHeeeeec
Confidence 89999999999999999887764442 222111 1 112667887 4689999999 89999999999988763
Q ss_pred CCCceEEEEEEEc
Q 013680 414 EVGDHACFSYFTL 426 (438)
Q Consensus 414 ~~~~~~Cl~~~~~ 426 (438)
+.....|++.+..
T Consensus 283 ~~~~~~C~~~i~~ 295 (329)
T 1oew_A 283 STGSSSCFGGIQS 295 (329)
T ss_dssp STTCSEEEESEEE
T ss_pred CCCCCeEEEEEEe
Confidence 3224689986654
No 17
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=6.4e-47 Score=390.74 Aligned_cols=301 Identities=24% Similarity=0.372 Sum_probs=233.5
Q ss_pred CceeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCC-CCCcccccccCCCCCCCCCCCCCCCccccCC
Q 013680 97 SQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCA-PLSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175 (438)
Q Consensus 97 ~~~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~-~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~ 175 (438)
...+++.++.+.+||++|.||||||+|.|++||||+++||+|. .|. ...|. .++.|||++|+||+..
T Consensus 41 ~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~--~C~~~~~C~-------~~~~y~~~~SsT~~~~--- 108 (478)
T 1qdm_A 41 GDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSA--KCYFSIACY-------LHSRYKAGASSTYKKN--- 108 (478)
T ss_dssp SCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBT--TCCSCGGGG-------GSCCBCGGGCTTCBCC---
T ss_pred CceEEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecC--CCCCCcccc-------CCCCCCcccCCCeeeC---
Confidence 3457788888999999999999999999999999999999994 443 12222 3578999999999983
Q ss_pred CcCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEee
Q 013680 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMG 255 (438)
Q Consensus 176 ~~~C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlG 255 (438)
+|.|.+.|++| ++.|.+++|+|+|++. .++++.|||++.+.+..+....+|||||
T Consensus 109 ---------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~~~Fg~a~~~~~~~f~~~~~dGIlG 163 (478)
T 1qdm_A 109 ---------------GKPAAIQYGTG--SIAGYFSEDSVTVGDL--------VVKDQEFIEATKEPGITFLVAKFDGILG 163 (478)
T ss_dssp ---------------CCEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCBSHHHHCSSSEEEE
T ss_pred ---------------CcEEEEEcCCC--CeEEEEEEEEEEECCe--------EECCEEEEEEEecCCcccccccccceec
Confidence 58999999997 5899999999999875 5689999999988764333346799999
Q ss_pred cCCCCCCh------hHHHHhhcCC-cCcEEEEecCC----CCceEEeCcCCCCCc-eeeeeeecCCCCccEEEeEeeEEe
Q 013680 256 LGLGDVSV------PSLLAKAGLI-QNSFSICFDEN----DSGSVFFGDQGPATQ-QSTSFLPIGEKYDAYFVGVESYCI 323 (438)
Q Consensus 256 Lg~~~~S~------~~qL~~~g~i-~~~FS~cL~~~----~~G~l~fG~~d~~~~-~~~p~v~~~~~~~~y~v~l~~i~v 323 (438)
||++.++. ..+|+++|++ +++||+||.++ ..|.|+||++|+.++ +++.|+|+... .+|.|.|++|+|
T Consensus 164 Lg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~-~~w~v~l~~i~v 242 (478)
T 1qdm_A 164 LGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQK-GYWQFDMGDVLV 242 (478)
T ss_dssp CSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEE-TTEEEEECCEEE
T ss_pred ccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCC-CeEEEEEeEEEE
Confidence 99998875 3458899998 79999999875 379999999999874 67888887654 799999999999
Q ss_pred cCeEee--cCCcceEEcccCccccccHHHHHHHHHHHHHHh----------------------ccc-c------------
Q 013680 324 GNSCLT--QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLV----------------------SSK-R------------ 366 (438)
Q Consensus 324 g~~~~~--~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~----------------------~~~-~------------ 366 (438)
|++.+. .....+||||||++++||+++|++|.++|.... ... +
T Consensus 243 ~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~ 322 (478)
T 1qdm_A 243 GGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTF 322 (478)
T ss_dssp TTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC--
T ss_pred CCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhcccccccc
Confidence 998864 246789999999999999999999987774210 000 0
Q ss_pred ------------ccc-------cC-------------------------------ccccce---------eecccccccC
Q 013680 367 ------------ISL-------QG-------------------------------NSWKYC---------YNASSEEMLK 387 (438)
Q Consensus 367 ------------~~~-------~~-------------------------------~~~~~C---------y~~~~~~~~~ 387 (438)
+.. .. ...+.| |.++|+....
T Consensus 323 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~~ 402 (478)
T 1qdm_A 323 DGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGS 402 (478)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGTT
T ss_pred CccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccccc
Confidence 000 00 001122 5677877778
Q ss_pred CCeEEEEEcCCcEEEEecceeEEeeCCCCceEEEEEEEcCC---CceeEEEe
Q 013680 388 VPDMRLIFSKNQSFVVRNHIFSFPENEVGDHACFSYFTLEY---NFTGILIL 436 (438)
Q Consensus 388 ~P~it~~f~gg~~~~l~~~~y~~~~~~~~~~~Cl~~~~~~~---~~~g~~il 436 (438)
+|+|+|+| ||..|.|++++|+++..++....|++.+...+ .....|||
T Consensus 403 lP~i~f~~-gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~IL 453 (478)
T 1qdm_A 403 MPDIEFTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWIL 453 (478)
T ss_dssp CCCEEEEE-TTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEE
T ss_pred cccEEEEE-CCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEE
Confidence 99999999 88999999999999875533468998554322 22346665
No 18
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=3.3e-47 Score=378.13 Aligned_cols=280 Identities=20% Similarity=0.314 Sum_probs=222.8
Q ss_pred eeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecC---CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCC
Q 013680 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ---CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175 (438)
Q Consensus 99 ~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~---C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~ 175 (438)
.+++.+ .+..|+++|.||||+|+|.|++||||+++||+|. |..|.... ....|..++.|+|++|+|++..
T Consensus 4 ~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~---~~~~C~~~~~y~~~~SsT~~~~--- 76 (342)
T 2qzx_A 4 AVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGD---KGDFCKSAGSYSPASSRTSQNL--- 76 (342)
T ss_dssp EEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSC---CTTGGGTTCCBCGGGCTTCEEE---
T ss_pred eEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccC---ccccccCCCcCCcccCCCcccC---
Confidence 455655 4678999999999999999999999999999975 44432111 0112335789999999999985
Q ss_pred CcCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEee
Q 013680 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMG 255 (438)
Q Consensus 176 ~~~C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlG 255 (438)
.|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||++... ..+||||
T Consensus 77 ---------------~~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~-------~~~GilG 125 (342)
T 2qzx_A 77 ---------------NTRFDIKYGDG-SYAKGKLYKDTVGIGGV--------SVRDQLFANVWSTS-------ARKGILG 125 (342)
T ss_dssp ---------------EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEEC-------SSSCEEE
T ss_pred ---------------CCcEEEEeCCC-CeEEEEEEEEEEEECCE--------EecceEEEEEEecC-------CCcCEEE
Confidence 48999999996 66889999999999875 56899999999763 4589999
Q ss_pred cCCCCC--------ChhHHHHhhcCC-cCcEEEEecCC--CCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEEe
Q 013680 256 LGLGDV--------SVPSLLAKAGLI-QNSFSICFDEN--DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCI 323 (438)
Q Consensus 256 Lg~~~~--------S~~~qL~~~g~i-~~~FS~cL~~~--~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~v 323 (438)
||+... +++.+|+++|++ +++||+||.+. ..|.|+||++|+.+ .+++.|+|+... .+|.|.|++|+|
T Consensus 126 Lg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v 204 (342)
T 2qzx_A 126 IGFQSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSE-KKLTVGLRSVNV 204 (342)
T ss_dssp CSCGGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS-SSCEEEEEEEEE
T ss_pred EccccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCC-ceEEEEEeEEEE
Confidence 999765 678899999999 79999999863 56999999999876 467888887765 699999999999
Q ss_pred cCeEeecCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEEE
Q 013680 324 GNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVV 403 (438)
Q Consensus 324 g~~~~~~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~l 403 (438)
|++.+. ....+||||||++++||+++|++|.++|.......+ . ....|.++|.. +|.|+|+|.||.++.|
T Consensus 205 ~g~~~~-~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~---~---~~~~~~~~C~~---~p~i~f~f~~g~~~~i 274 (342)
T 2qzx_A 205 RGRNVD-ANTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDS---A---GNKVYVADCKT---SGTIDFQFGNNLKISV 274 (342)
T ss_dssp TTEEEE-EEEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECT---T---SCEEEEECTTC---CCEEEEEETTTEEEEE
T ss_pred CCEecC-CCcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeecc---C---CCcEEEEECCC---CCcEEEEECCCcEEEE
Confidence 999886 346799999999999999999998877754332111 0 01247788863 7999999977899999
Q ss_pred ecceeEEeeC---CCCceEEEEEEEcC
Q 013680 404 RNHIFSFPEN---EVGDHACFSYFTLE 427 (438)
Q Consensus 404 ~~~~y~~~~~---~~~~~~Cl~~~~~~ 427 (438)
++++|+++.. ......|++.+...
T Consensus 275 ~~~~~~~~~~~~~~~~~~~C~~~i~~~ 301 (342)
T 2qzx_A 275 PVSEFLFQTYYTSGKPFPKCEVRIRES 301 (342)
T ss_dssp EGGGGEECCBCTTSCBCSSEEESEEEC
T ss_pred cHHHhcccccccCCCCCCccEEEEecC
Confidence 9999998742 11235799876643
No 19
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=6.3e-47 Score=374.91 Aligned_cols=274 Identities=20% Similarity=0.305 Sum_probs=222.1
Q ss_pred eeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecC---CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCC
Q 013680 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ---CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175 (438)
Q Consensus 99 ~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~---C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~ 175 (438)
.+++.+. +..|+++|.||||+|+|.|++||||+++||+|. |..|.... ....|..++.|||++|+|++..
T Consensus 4 ~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~---~~~~C~~~~~y~~~~SsT~~~~--- 76 (334)
T 1j71_A 4 PTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQ---TNNFCKQEGTFDPSSSSSAQNL--- 76 (334)
T ss_dssp EEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTC---CTTGGGSSCCBCGGGCTTCEEE---
T ss_pred eEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCccccc---ccccccCCCcCCcccCCCcccC---
Confidence 3566655 778999999999999999999999999999975 44332100 0012335789999999999985
Q ss_pred CcCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEee
Q 013680 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMG 255 (438)
Q Consensus 176 ~~~C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlG 255 (438)
.|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||++... ..+||||
T Consensus 77 ---------------~~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~-------~~~GilG 125 (334)
T 1j71_A 77 ---------------NQDFSIEYGDL-TSSQGSFYKDTVGFGGI--------SIKNQQFADVTTTS-------VDQGIMG 125 (334)
T ss_dssp ---------------EEEEEEEBTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES-------SSSCEEE
T ss_pred ---------------CCceEEEECCC-CEEEEEEEEEEEEECCE--------EEccEEEEEEEecC-------CCccEEE
Confidence 48999999996 66889999999999875 56899999999763 4589999
Q ss_pred cCCCCC--------ChhHHHHhhcCC-cCcEEEEecCC--CCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEEe
Q 013680 256 LGLGDV--------SVPSLLAKAGLI-QNSFSICFDEN--DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCI 323 (438)
Q Consensus 256 Lg~~~~--------S~~~qL~~~g~i-~~~FS~cL~~~--~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~v 323 (438)
||+..+ +++.+|+++|++ +++||+||.+. ..|.|+||++|+.+ .+++.|+|+... .+|.|.|++|+|
T Consensus 126 Lg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v 204 (334)
T 1j71_A 126 IGFTADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS-VELRVHLGSINF 204 (334)
T ss_dssp CSCGGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS-SSCEEEEEEEEE
T ss_pred EcCCcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCC-CeEEEEEeEEEE
Confidence 999865 678899999999 79999999863 57999999999987 468888888765 699999999999
Q ss_pred cCeEeecCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceee-cccccccCCCeEEEEEcCCcEEE
Q 013680 324 GNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYN-ASSEEMLKVPDMRLIFSKNQSFV 402 (438)
Q Consensus 324 g~~~~~~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~-~~~~~~~~~P~it~~f~gg~~~~ 402 (438)
|++.+. ....+||||||++++||+++|++|.++|..... .. ...|. ++|.. +|.|+|+|.||.++.
T Consensus 205 ~g~~~~-~~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~-----~~~~~~~~C~~---~p~i~f~f~~g~~~~ 271 (334)
T 1j71_A 205 DGTSVS-TNADVVLDSGTTITYFSQSTADKFARIVGATWD----SR-----NEIYRLPSCDL---SGDAVFNFDQGVKIT 271 (334)
T ss_dssp TTEEEE-EEEEEEECTTCSSEEECHHHHHHHHHHHTCEEE----TT-----TTEEECSSSCC---CSEEEEEESTTCEEE
T ss_pred CCEecc-CCccEEEeCCCCcEecCHHHHHHHHHHcCCccc----CC-----CceEEEEcCCC---CCceEEEEcCCcEEE
Confidence 999886 346799999999999999999999877754431 11 11366 77853 799999997789999
Q ss_pred EecceeEEeeCCCCceEEEEEEEc
Q 013680 403 VRNHIFSFPENEVGDHACFSYFTL 426 (438)
Q Consensus 403 l~~~~y~~~~~~~~~~~Cl~~~~~ 426 (438)
|++++|+++..+ +..|++.+..
T Consensus 272 i~~~~y~~~~~~--~~~C~~~i~~ 293 (334)
T 1j71_A 272 VPLSELILKDSD--SSICYFGISR 293 (334)
T ss_dssp EEGGGGEEECSS--SSCEEESEEE
T ss_pred ECHHHheeecCC--CCeeEEEEeE
Confidence 999999998644 3359976654
No 20
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.1e-46 Score=378.47 Aligned_cols=283 Identities=18% Similarity=0.342 Sum_probs=227.4
Q ss_pred ceeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCc
Q 013680 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHP 177 (438)
Q Consensus 98 ~~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~ 177 (438)
..+++.++.+..|+++|.||||+|+|.|++||||+++||+|. .|....|. .++.|+|++|+|++..
T Consensus 52 ~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~~----- 117 (375)
T 1miq_A 52 DVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSK--KCNSSGCS-------IKNLYDSSKSKSYEKD----- 117 (375)
T ss_dssp BCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBT--TCCSSGGG-------GSCCBCGGGCTTCEEE-----
T ss_pred ceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccC--CCCccccc-------CCCcCCCccCCceEEC-----
Confidence 347788888899999999999999999999999999999994 44433332 3589999999999984
Q ss_pred CCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEe----ccCCCCCCCCCceE
Q 013680 178 LCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRK----QTGSYLDGAAPDGV 253 (438)
Q Consensus 178 ~C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~----~~g~~~~~~~~dGI 253 (438)
.|.|.+.|++| ++.|.+++|+|+|++. .+++ .|||++. +. .| .....+||
T Consensus 118 -------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~-~Fg~~~~~~~~~~-~f-~~~~~dGi 171 (375)
T 1miq_A 118 -------------GTKVDITYGSG--TVKGFFSKDLVTLGHL--------SMPY-KFIEVTDTDDLEP-IY-SSVEFDGI 171 (375)
T ss_dssp -------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EEEE-EEEEEEECGGGTT-HH-HHSCCCEE
T ss_pred -------------CcEEEEEeCCC--eEEEEEEEEEEEEcCc--------eECc-EEEEEEecccccc-cc-ccCCCceE
Confidence 48999999997 5899999999999875 4577 9999998 54 33 22356999
Q ss_pred eecCCCCCCh------hHHHHhhcCC-cCcEEEEecCC--CCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEEe
Q 013680 254 MGLGLGDVSV------PSLLAKAGLI-QNSFSICFDEN--DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCI 323 (438)
Q Consensus 254 lGLg~~~~S~------~~qL~~~g~i-~~~FS~cL~~~--~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~v 323 (438)
||||++.++. ..+|+++|++ +++||+||.++ ..|.|+||++|+.+ .+++.|+|+... .+|.|.++ |+|
T Consensus 172 lGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~-i~v 249 (375)
T 1miq_A 172 LGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHD-LYWQIDLD-VHF 249 (375)
T ss_dssp EECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSS-SSSEEEEE-EEE
T ss_pred EeCCCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCC-ceEEEEEE-EEE
Confidence 9999988764 5679999999 79999999986 37999999999887 468888888765 79999999 999
Q ss_pred cCeEeecCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEEE
Q 013680 324 GNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVV 403 (438)
Q Consensus 324 g~~~~~~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~l 403 (438)
|++.+ ....+||||||++++||+++|++|.++|.... ....+ .|.++|.. ..+|+|+|+| ||..|.|
T Consensus 250 ~g~~~--~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~---~~~~g------~~~~~C~~-~~~P~i~f~f-~g~~~~l 316 (375)
T 1miq_A 250 GKQTM--EKANVIVDSGTTTITAPSEFLNKFFANLNVIK---VPFLP------FYVTTCDN-KEMPTLEFKS-ANNTYTL 316 (375)
T ss_dssp TTEEE--EEEEEEECTTBSSEEECHHHHHHHHHHHTCEE---CTTSS------CEEEETTC-TTCCCEEEEC-SSCEEEE
T ss_pred CCEEc--ccceEEecCCCccEEcCHHHHHHHHHHhCCcc---cCCCC------eEEEECCC-CCCCcEEEEE-CCEEEEE
Confidence 99988 56789999999999999999998887764321 11111 26778876 6789999999 8899999
Q ss_pred ecceeEEeeCCCCceEEE-EEEEcCCCceeEEEe
Q 013680 404 RNHIFSFPENEVGDHACF-SYFTLEYNFTGILIL 436 (438)
Q Consensus 404 ~~~~y~~~~~~~~~~~Cl-~~~~~~~~~~g~~il 436 (438)
++++|+++..+.....|+ ++...... .+.|||
T Consensus 317 ~~~~yi~~~~~~g~~~C~~~~~~~~~~-~~~~IL 349 (375)
T 1miq_A 317 EPEYYMNPILEVDDTLCMITMLPVDID-SNTFIL 349 (375)
T ss_dssp CGGGSEEESSSSSCSEEEESEEECCSS-SSEEEE
T ss_pred CHHHhEeeccCCCCCeEEEEEEECCCC-CCcEEE
Confidence 999999987532245899 45544321 245665
No 21
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=4e-46 Score=381.64 Aligned_cols=285 Identities=18% Similarity=0.260 Sum_probs=231.2
Q ss_pred CceeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCC
Q 013680 97 SQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSH 176 (438)
Q Consensus 97 ~~~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~ 176 (438)
...+++.++.+..||++|.||||||++.|++||||+++||+|. .|....|. .++.|+|++|+|++..
T Consensus 126 ~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~--~C~s~~C~-------~~~~ydps~SsT~~~~---- 192 (451)
T 3qvc_A 126 FDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSI--KCTSESCE-------SKNHYDSSKSKTYEKD---- 192 (451)
T ss_dssp -CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBT--TCCSGGGT-------TSCCBCGGGCTTCEEE----
T ss_pred CCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC--CCCccccC-------CCCCCCCCCCcccccC----
Confidence 4557899999999999999999999999999999999999994 45433332 4689999999999984
Q ss_pred cCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEe----ccCCCCCCCCCce
Q 013680 177 PLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRK----QTGSYLDGAAPDG 252 (438)
Q Consensus 177 ~~C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~----~~g~~~~~~~~dG 252 (438)
+|.|.+.|++| ++.|.+++|+|+|++. .++ +.|||++. +.+ + .....+|
T Consensus 193 --------------~~~f~i~YgdG--s~~G~~~~Dtv~igg~--------~v~-~~Fg~a~~t~~~~~~-f-~~~~~dG 245 (451)
T 3qvc_A 193 --------------DTPVKLTSKAG--TISGIFSKDLVTIGKL--------SVP-YKFIEMTEIVGFEPF-Y-SESDVDG 245 (451)
T ss_dssp --------------EEEEEEECSSE--EEEEEEEEEEEEETTE--------EEE-EEEEEEEEEEECTTH-H-HHSCCCE
T ss_pred --------------CCEEEEEECCC--EEEEEEEEEEEEECCE--------EEE-EEEEEEEeccccCCC-c-cCCCCCE
Confidence 48999999997 4999999999999875 457 99999998 665 3 2235699
Q ss_pred EeecCCCCCC------hhHHHHhhcCC-cCcEEEEecCCC--CceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEE
Q 013680 253 VMGLGLGDVS------VPSLLAKAGLI-QNSFSICFDEND--SGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYC 322 (438)
Q Consensus 253 IlGLg~~~~S------~~~qL~~~g~i-~~~FS~cL~~~~--~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~ 322 (438)
|||||++.++ ++.+|+++|++ +++||+||.+.. .|.|+||++|+.+ .+++.|+|+... .+|.|.++ |+
T Consensus 246 ILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~-~~w~v~l~-I~ 323 (451)
T 3qvc_A 246 VFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHD-LMWQVDLD-VH 323 (451)
T ss_dssp EEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSST-TSSEEEEE-EE
T ss_pred EEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccC-CeeEEEEE-EE
Confidence 9999998754 46779999999 899999999863 6999999999987 478889888865 89999999 99
Q ss_pred ecCeEeecCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEE
Q 013680 323 IGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFV 402 (438)
Q Consensus 323 vg~~~~~~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~ 402 (438)
||++ ......+||||||++++||+++|++|.++ +++.... ...+|.++|+ ...+|+|+|+| ||..+.
T Consensus 324 Vgg~--~~~~~~aiiDSGTt~i~lP~~~~~~i~~~----i~a~~~~-----~~g~y~v~C~-~~~~P~itf~f-gg~~i~ 390 (451)
T 3qvc_A 324 FGNV--SSKKANVILDSATSVITVPTEFFNQFVES----ASVFKVP-----FLSLYVTTCG-NTKLPTLEYRS-PNKVYT 390 (451)
T ss_dssp ETTE--EEEEEEEEECTTBSSEEECHHHHHHHHTT----TTCEECT-----TSSCEEEETT-CTTCCCEEEEE-TTEEEE
T ss_pred ECCc--cCCCceEEEeCCCccccCCHHHHHHHHHH----cCCeecC-----CCCeEEeeCC-cCcCCcEEEEE-CCEEEE
Confidence 9998 33567899999999999999998777644 4443221 1234888998 67899999999 899999
Q ss_pred EecceeEEeeCCCCceEEEEEEEcCCCceeEEEe
Q 013680 403 VRNHIFSFPENEVGDHACFSYFTLEYNFTGILIL 436 (438)
Q Consensus 403 l~~~~y~~~~~~~~~~~Cl~~~~~~~~~~g~~il 436 (438)
|++++|++...+.....|+..+...+...+.|||
T Consensus 391 lp~~~yi~~~~~~~~~~C~~~i~~~~~~~~~~IL 424 (451)
T 3qvc_A 391 LEPKQYLEPLENIFSALCMLNIVPIDLEKNTFVL 424 (451)
T ss_dssp ECHHHHEEECTTTSTTEEEECEEECCCSTTEEEE
T ss_pred EcHHHheeecccCCCCeEEEEEEeCCCCCCCEEE
Confidence 9999999987533346899766654422345554
No 22
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.3e-45 Score=366.16 Aligned_cols=271 Identities=21% Similarity=0.328 Sum_probs=218.8
Q ss_pred eeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecC---CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCC
Q 013680 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ---CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175 (438)
Q Consensus 99 ~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~---C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~ 175 (438)
.+++.+. +..|+++|.||||||++.|++||||+++||++. |..|. . |..++.|+|++|+|++.+.
T Consensus 4 ~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~--~-------C~~~~~y~~~~SsT~~~~~-- 71 (339)
T 3fv3_A 4 SLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGV--D-------CKSSGTFTPSSSSSYKNLG-- 71 (339)
T ss_dssp EEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTC--C-------TTTTCCBCGGGCTTCEEEE--
T ss_pred eeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCC--C-------CCCCCcCCCccCcceeeCC--
Confidence 3556544 568999999999999999999999999999953 33221 1 1236899999999999864
Q ss_pred CcCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEee
Q 013680 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMG 255 (438)
Q Consensus 176 ~~~C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlG 255 (438)
|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||++...+ .+||||
T Consensus 72 ----------------~~~~i~Yg~g-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~-------~~GilG 119 (339)
T 3fv3_A 72 ----------------AAFTIRYGDG-STSQGTWGKDTVTINGV--------SITGQQIADVTQTSV-------DQGILG 119 (339)
T ss_dssp ----------------EEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEESS-------SSCEEE
T ss_pred ----------------ceEEEEECCC-ceEEEEEEEEEEEECCE--------EECceEEEEEEecCC-------CceeEE
Confidence 8999999996 78999999999999975 568999999998764 389999
Q ss_pred cCCCCCC----------------hhHHHHhhcCC-cCcEEEEecCC--CCceEEeCcCCCCC-ceeeeeeecCCCCccEE
Q 013680 256 LGLGDVS----------------VPSLLAKAGLI-QNSFSICFDEN--DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYF 315 (438)
Q Consensus 256 Lg~~~~S----------------~~~qL~~~g~i-~~~FS~cL~~~--~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~ 315 (438)
||++.++ ++.+|+++|+| +++||+||.+. ..|.|+||++|+.+ .+++.|+|+... .+|.
T Consensus 120 Lg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~ 198 (339)
T 3fv3_A 120 IGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSS-QALT 198 (339)
T ss_dssp CSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCS-SSCE
T ss_pred ecCccccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccC-ccEE
Confidence 9998754 67889999999 79999999875 47999999999987 467888888775 6999
Q ss_pred EeEeeEEecCeEeecCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEE
Q 013680 316 VGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIF 395 (438)
Q Consensus 316 v~l~~i~vg~~~~~~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f 395 (438)
|++++|+|+++.+. ....+||||||++++||+++|++|.++|.......... ..-|.++|.. ..+|.|+|+|
T Consensus 199 v~l~~i~v~g~~~~-~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~------~~~~~~~C~~-~~~p~i~f~f 270 (339)
T 3fv3_A 199 ISLASVNLKGSSFS-FGDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARD------QYLYFIDCNT-DTSGTTVFNF 270 (339)
T ss_dssp EEEEEEEESSCEEE-EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETT------EEEEEECTTC-CCCSEEEEEE
T ss_pred EEEEEEEECCEeec-CCccEEEeCCCCCEecCHHHHHHHHHHcCCEEcccccc------CceEEEecCC-CCCCcEEEEE
Confidence 99999999999886 34679999999999999999999887775432211001 1126778875 4689999999
Q ss_pred cCCcEEEEecceeEEeeCCCCceEEEEEEE
Q 013680 396 SKNQSFVVRNHIFSFPENEVGDHACFSYFT 425 (438)
Q Consensus 396 ~gg~~~~l~~~~y~~~~~~~~~~~Cl~~~~ 425 (438)
.+|.++.|++++|+++.. ...|+..+.
T Consensus 271 ~~g~~~~v~~~~~~~~~~---~~~C~~~i~ 297 (339)
T 3fv3_A 271 GNGAKITVPNTEYVYQNG---DGTCLWGIQ 297 (339)
T ss_dssp TTSCEEEEEGGGGEEECS---SSCEEESEE
T ss_pred CCCCEEEECHHHheeeCC---CCeEEEEEE
Confidence 668999999999998853 346954443
No 23
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.3e-45 Score=364.89 Aligned_cols=273 Identities=17% Similarity=0.237 Sum_probs=222.8
Q ss_pred eeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCC
Q 013680 100 HFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLC 179 (438)
Q Consensus 100 ~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C 179 (438)
.++.|+.+..|+++|.|| +|+|.|++||||+++||+|. .|....|. +..++.|||++| |++..
T Consensus 9 ~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~--~C~~~~C~-----~~~~~~y~~~~S-T~~~~------- 71 (330)
T 1yg9_A 9 KLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQ--ECVGGACV-----CPNLQKYEKLKP-KYISD------- 71 (330)
T ss_dssp SCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECT--TCCSGGGG-----STTCCCCCCSSC-EEEEE-------
T ss_pred eeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC--CCCCccCc-----ccccCccCCCCC-ceEEC-------
Confidence 567788889999999999 89999999999999999995 44332320 024689999999 99874
Q ss_pred CCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecCCC
Q 013680 180 KSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLG 259 (438)
Q Consensus 180 ~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~ 259 (438)
.+.|++.|++| ++.|.+++|+|+|++. .++++.|||++.+ +..+.....+||||||++
T Consensus 72 -----------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~ 129 (330)
T 1yg9_A 72 -----------GNVQVKFFDTG--SAVGRGIEDSLTISQL--------TTSQQDIVLADEL-SQEVCILSADVVVGIAAP 129 (330)
T ss_dssp -----------EEEEEEETTTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEE-CTHHHHTTCSEEEECSCT
T ss_pred -----------CCEEEEEECCc--eEEEEEEEEEEEECCE--------EEcCeEEEEEEEc-ccccccccCceEEEcCcc
Confidence 48999999997 5699999999999875 5689999999988 432222356999999998
Q ss_pred CCC-------hhHHHHhhcCCcCcEEEEecCC--C--CceEEeCcCCCCCc-eeeeeeecCCCCccEEEeEeeEEecCeE
Q 013680 260 DVS-------VPSLLAKAGLIQNSFSICFDEN--D--SGSVFFGDQGPATQ-QSTSFLPIGEKYDAYFVGVESYCIGNSC 327 (438)
Q Consensus 260 ~~S-------~~~qL~~~g~i~~~FS~cL~~~--~--~G~l~fG~~d~~~~-~~~p~v~~~~~~~~y~v~l~~i~vg~~~ 327 (438)
.++ ++.+|+++|+++++||+||.++ . .|.|+||++|+.+. +++.|+|+... .+|.|.|++|+|+++.
T Consensus 130 ~~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i~v~~~~ 208 (330)
T 1yg9_A 130 GCPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGD-DSWKFRLDGVKIGDTT 208 (330)
T ss_dssp TSCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCT-TSCCEECSEEEETTEE
T ss_pred hhccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCC-CEEEEEeCeEEECCEE
Confidence 877 5677999998899999999875 2 69999999999874 68889888754 8999999999999998
Q ss_pred eecCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCcccccee-ecccccccCCCeEEEEEcCCcEEEEecc
Q 013680 328 LTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCY-NASSEEMLKVPDMRLIFSKNQSFVVRNH 406 (438)
Q Consensus 328 ~~~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy-~~~~~~~~~~P~it~~f~gg~~~~l~~~ 406 (438)
+......+||||||++++||+++|++|.++|. +.....+ ...| .++|.....+|+|+|+| ||.++.|+++
T Consensus 209 ~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~----~~~~~~g----~~~~~~~~C~~~~~~p~i~f~f-gg~~~~l~~~ 279 (330)
T 1yg9_A 209 VAPAGTQAIIDTSKAIIVGPKAYVNPINEAIG----CVVEKTT----TRRICKLDCSKIPSLPDVTFVI-NGRNFNISSQ 279 (330)
T ss_dssp EECTTCEEEECTTCSSEEEEHHHHHHHHHHHT----CEEEECS----SCEEEEECGGGGGGSCCEEEEE-TTEEEEECHH
T ss_pred EcCCCcEEEEecCCccccCCHHHHHHHHHHhC----CcccCCC----ceEEEEEECCCccccCcEEEEE-CCEEEEECHH
Confidence 76566789999999999999999988887663 3222111 1136 78898777899999999 8999999999
Q ss_pred eeEEeeCCCCceEEEEEEE
Q 013680 407 IFSFPENEVGDHACFSYFT 425 (438)
Q Consensus 407 ~y~~~~~~~~~~~Cl~~~~ 425 (438)
+|+++. ...|+..+.
T Consensus 280 ~y~~~~----~~~C~~~i~ 294 (330)
T 1yg9_A 280 YYIQQN----GNLCYSGFQ 294 (330)
T ss_dssp HHEEEE----TTEEEESEE
T ss_pred HhcccC----CCcEEEEEE
Confidence 999987 248996554
No 24
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.4e-45 Score=366.28 Aligned_cols=280 Identities=23% Similarity=0.372 Sum_probs=221.6
Q ss_pred eeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecC---CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCC
Q 013680 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ---CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175 (438)
Q Consensus 99 ~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~---C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~ 175 (438)
.+++.+. +..|+++|.||||||++.|++||||+++||+|. |..|..... ...|..++.|+|++|+|++.+.
T Consensus 4 ~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~---~~~C~~~~~y~~~~SsT~~~~~-- 77 (342)
T 3pvk_A 4 PVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQT---ADFCKQKGTYDPSGSSASQDLN-- 77 (342)
T ss_dssp EEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCC---TTGGGTTCCBCGGGCTTCEEEE--
T ss_pred ceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccc---cCCCCCCCcCCCccCcceeecC--
Confidence 3555443 578999999999999999999999999999984 555532211 0123357899999999999864
Q ss_pred CcCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEee
Q 013680 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMG 255 (438)
Q Consensus 176 ~~~C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlG 255 (438)
|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||++... ..+||||
T Consensus 78 ----------------~~~~i~Yg~g-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~-------~~~GilG 125 (342)
T 3pvk_A 78 ----------------TPFKIGYGDG-SSSQGTLYKDTVGFGGV--------SIKNQVLADVDSTS-------IDQGILG 125 (342)
T ss_dssp ----------------EEEEEECSSS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES-------SSSCEEE
T ss_pred ----------------CeEEEEecCC-CeEEEEEEEEEEEECCE--------EecceEEEEEEccC-------CCccEEE
Confidence 8999999996 67999999999999975 56899999998764 3599999
Q ss_pred cCCCCC-------ChhHHHHhhcCC-cCcEEEEecCC--CCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEEec
Q 013680 256 LGLGDV-------SVPSLLAKAGLI-QNSFSICFDEN--DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIG 324 (438)
Q Consensus 256 Lg~~~~-------S~~~qL~~~g~i-~~~FS~cL~~~--~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vg 324 (438)
||+..+ +++.+|+++|+| +++||+||.+. ..|.|+||++|+.+ .+++.|+|+... .+|.|.+++|+|+
T Consensus 126 Lg~~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~ 204 (342)
T 3pvk_A 126 VGYKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSD-RELRISLGSVEVS 204 (342)
T ss_dssp CSCGGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS-SSCEEEEEEEEET
T ss_pred ecCccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCcc-ceEEEEEeEEEEC
Confidence 999873 578899999999 79999999874 46999999999987 467888888776 6999999999999
Q ss_pred CeEeecCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEEEe
Q 013680 325 NSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVR 404 (438)
Q Consensus 325 ~~~~~~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~l~ 404 (438)
++.+......+||||||++++||+++|++|.++|.... ..... ...+|.++|.. .|+|+|+|.+|.++.|+
T Consensus 205 g~~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~----~~~~~--~~~~~~~~C~~---~p~i~f~f~~g~~~~vp 275 (342)
T 3pvk_A 205 GKTINTDNVDVLLDSGTTITYLQQDLADQIIKAFNGKL----TQDSN--GNSFYEVDCNL---SGDVVFNFSKNAKISVP 275 (342)
T ss_dssp TEEEEEEEEEEEECTTCSSEEECHHHHHHHHHHTTCEE----EECTT--SCEEEEECSCC---CSEEEEEESTTCEEEEE
T ss_pred CEEecCCCceEEEeCCCCCeecCHHHHHHHHHHcCCee----cccCC--CceEEEEecCC---CCceEEEECCCCEEEEc
Confidence 99987666789999999999999999888876664322 11111 12358888974 49999999658899999
Q ss_pred cceeEEeeCC--C-CceEEEEEEEc
Q 013680 405 NHIFSFPENE--V-GDHACFSYFTL 426 (438)
Q Consensus 405 ~~~y~~~~~~--~-~~~~Cl~~~~~ 426 (438)
+++|+++... + ....|+..+..
T Consensus 276 ~~~~~~~~~~~~g~~~~~C~~~i~~ 300 (342)
T 3pvk_A 276 ASEFAASLQGDDGQPYDKCQLLFDV 300 (342)
T ss_dssp GGGGEEC----------CEEESEEE
T ss_pred HHHheeeccccCCCcCCeeEEEEee
Confidence 9999987421 1 12579876654
No 25
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2.6e-45 Score=369.64 Aligned_cols=291 Identities=18% Similarity=0.357 Sum_probs=216.8
Q ss_pred eeec-ccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcC
Q 013680 100 HFFG-NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPL 178 (438)
Q Consensus 100 ~~l~-~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~ 178 (438)
+++. ++.+.+||++|.|||| |++||||+++||+|. .| .+++.++|+++.
T Consensus 5 ~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~--~~-----------------------~~~~~~~C~s~~ 54 (381)
T 1t6e_X 5 APVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD--GG-----------------------QPPAEIPCSSPT 54 (381)
T ss_dssp EEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCC--TT-----------------------CCCCCCBTTSHH
T ss_pred EeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCC--CC-----------------------CCCCccCCCCch
Confidence 4454 6778899999999998 999999999999994 22 124455666666
Q ss_pred CCC-----CCCCCCC-------CCCC-ceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCccccc----EEEEeEEecc
Q 013680 179 CKS-----RSSCKSL-------KDPC-PYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSS----VIIGCGRKQT 241 (438)
Q Consensus 179 C~~-----~~~C~~~-------~~~c-~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~----~~fGc~~~~~ 241 (438)
|.. ..+|... ...| .|.++|++| +.++|.+++|+|+|++.++. ..+++ +.|||++.+.
T Consensus 55 C~~~~~~~~~sc~~~~~~~~~~~~~c~~f~i~YgdG-s~~~G~l~~Dtv~ig~~~g~----~~v~~~~~~~~Fg~~~~~~ 129 (381)
T 1t6e_X 55 CLLANAYPAPGCPAPSCGSDKHDKPCTAYPYNPVSG-ACAAGSLSHTRFVANTTDGS----KPVSKVNVGVLAACAPSKL 129 (381)
T ss_dssp HHHHHSSCCTTCCCCCC------CBCEECCBCTTTC-CBCCEEEEEEEEEEEEESSS----SEEEEEEEEEEEEECCGGG
T ss_pred hccccCCCCCCCCCccCCcCcCCCccccccccccCC-ceeeEEEEEEEEEeeccCCC----ccccceeeeeEeecCcccc
Confidence 642 1245421 2357 599999996 56689999999999864221 13344 4679998873
Q ss_pred CCCCCCCCCceEeecCCCCCChhHHHHhhcCCcCcEEEEecCCCCceEEeCcCCCC---CceeeeeeecCCC--CccEEE
Q 013680 242 GSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPA---TQQSTSFLPIGEK--YDAYFV 316 (438)
Q Consensus 242 g~~~~~~~~dGIlGLg~~~~S~~~qL~~~g~i~~~FS~cL~~~~~G~l~fG~~d~~---~~~~~p~v~~~~~--~~~y~v 316 (438)
+..+ ....|||||||++++|++.||+++++++++||+||.++..|.|+||+.+.. +.+.+.|+|+... ..+|+|
T Consensus 130 ~~~~-~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v 208 (381)
T 1t6e_X 130 LASL-PRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYI 208 (381)
T ss_dssp GTTS-CTTEEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEE
T ss_pred cCCC-CCCCceEEEeCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCCcceEE
Confidence 2212 236799999999999999999999877999999999877899999998754 2344444444321 256789
Q ss_pred eEeeEEecCeEeecC-----CcceEEcccCccccccHHHHHHHHHHHHHHhcc--------ccccccCccccceeecccc
Q 013680 317 GVESYCIGNSCLTQS-----GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSS--------KRISLQGNSWKYCYNASSE 383 (438)
Q Consensus 317 ~l~~i~vg~~~~~~~-----~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~--------~~~~~~~~~~~~Cy~~~~~ 383 (438)
+|++|+||++.+... ...+||||||++|+||+++|++|.++|.+++.. .+.......+..||..++.
T Consensus 209 ~l~~i~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~ 288 (381)
T 1t6e_X 209 SARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTL 288 (381)
T ss_dssp CEEEEEETTEECCCCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGC
T ss_pred EEEEEEEcCEEecCCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCC
Confidence 999999999987532 246999999999999999999999999887752 1111122456889988764
Q ss_pred c----ccCCCeEEEEEcCCcEEEEecceeEEeeCCCCceEEEEEEEcCC
Q 013680 384 E----MLKVPDMRLIFSKNQSFVVRNHIFSFPENEVGDHACFSYFTLEY 428 (438)
Q Consensus 384 ~----~~~~P~it~~f~gg~~~~l~~~~y~~~~~~~~~~~Cl~~~~~~~ 428 (438)
. ...+|+|+|+|.||++|.|++++|+++..+ +..|++++....
T Consensus 289 ~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~ 335 (381)
T 1t6e_X 289 GNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQ--GTACVAFVEMKG 335 (381)
T ss_dssp CEETTEECCCCEEEEETTSCEEEECHHHHEEEEET--TEEEESEEECCC
T ss_pred cccccCCcCCeEEEEECCCcEEEeCCCeEEEEcCC--CeEEEEEEcCCC
Confidence 2 136899999996679999999999998644 578999887653
No 26
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=7.4e-45 Score=358.71 Aligned_cols=269 Identities=19% Similarity=0.318 Sum_probs=215.2
Q ss_pred ccceEEEEEEeCCCCeEEEEEEECCCCceeEecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCC
Q 013680 106 FYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSS 184 (438)
Q Consensus 106 ~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~ 184 (438)
.+.+|+++|.|| +|+|.|++||||+++||+|. |..|. | ..++.|+|++|+ ++.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~---c-------~~~~~y~~~~Ss-~~~------------- 65 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSE---Q-------TGHDLYTPSSSA-TKL------------- 65 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHH---H-------TTSCCCBCCSSC-EEC-------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccc---c-------CCCCCCCchhcC-Ccc-------------
Confidence 567899999999 89999999999999999996 66553 1 246899999998 543
Q ss_pred CCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecCCCCCCh-
Q 013680 185 CKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSV- 263 (438)
Q Consensus 185 C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~~S~- 263 (438)
+.|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||++.+.+.+......+||||||+..++.
T Consensus 66 -----~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 131 (325)
T 1ibq_A 66 -----SGYSWDISYGDG-SSASGDVYRDTVTVGGV--------TTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTV 131 (325)
T ss_dssp -----TTCBEEEECSSS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCC
T ss_pred -----CCCEEEEEeCCC-CEEEEEEEEeEEEECCE--------EEcceEEEEEEecCccccccCCCceEEEeCccccccc
Confidence 359999999996 56899999999999875 568999999999877665444679999999987664
Q ss_pred --------hHHHHhhcCCcCcEEEEecCCCCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEEecCeEeecCCcc
Q 013680 264 --------PSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQ 334 (438)
Q Consensus 264 --------~~qL~~~g~i~~~FS~cL~~~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vg~~~~~~~~~~ 334 (438)
..+|+++ +.+++||+||.++..|.|+||++|+.+ .+++.|+|+.....+|.|+|++|+||++.+......
T Consensus 132 ~p~~~~~~~~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~ 210 (325)
T 1ibq_A 132 QPKAQTTFFDTVKSQ-LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSSSSGFS 210 (325)
T ss_dssp BSSCCCCHHHHHGGG-SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCBSCCEE
T ss_pred CcCCCCCHHHHHHHh-cCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeeccCCCce
Confidence 4678776 448999999998778999999999876 467778777644579999999999999887656778
Q ss_pred eEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEEEecceeEEeeCC
Q 013680 335 ALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENE 414 (438)
Q Consensus 335 aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~l~~~~y~~~~~~ 414 (438)
+||||||++++||+++|++|.++|. ++...... .-|.++|. ..+|+|+|+| ||.++.|++++|++...+
T Consensus 211 aiiDSGTt~~~lP~~~~~~i~~~i~---~a~~~~~~-----g~~~~~C~--~~~P~i~f~f-gg~~~~i~~~~~~~~~~~ 279 (325)
T 1ibq_A 211 AIADTGTTLILLDDEIVSAYYEQVS---GAQESYEA-----GGYVFSCS--TDLPDFTVVI-GDYKAVVPGKYINYAPVS 279 (325)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTST---TCBCCSSS-----SSCEEETT--CCCCCEEEEE-TTEEEEECHHHHEEEESS
T ss_pred EEEeCCCCcEeCCHHHHHHHHHhCC---CceEcCcC-----CeEEEEcC--CCCCcEEEEE-CCEEEEECHHHhcccccC
Confidence 9999999999999999888775542 22221111 11567787 4689999999 899999999999887633
Q ss_pred CCceEEEEEEEc
Q 013680 415 VGDHACFSYFTL 426 (438)
Q Consensus 415 ~~~~~Cl~~~~~ 426 (438)
.....|++.+..
T Consensus 280 ~~~~~C~~~i~~ 291 (325)
T 1ibq_A 280 TGSSTCYGGIQS 291 (325)
T ss_dssp TTCSEEEESEEE
T ss_pred CCCCeEEEEEEc
Confidence 123689986654
No 27
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-44 Score=364.26 Aligned_cols=282 Identities=20% Similarity=0.262 Sum_probs=218.0
Q ss_pred eecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCC
Q 013680 101 FFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLC 179 (438)
Q Consensus 101 ~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C 179 (438)
+|.+..+..||++|.||||+|+|.|++||||+++||+|. |..| ++.|||++|+|++..
T Consensus 6 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~--------------~~~f~~~~SsT~~~~------- 64 (383)
T 2ewy_A 6 NLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI--------------DTYFDTERSSTYRSK------- 64 (383)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB--------------SCCCCGGGCTTCEEE-------
T ss_pred eccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCcc--------------ccCcccccCccceeC-------
Confidence 455666788999999999999999999999999999995 5433 378999999999985
Q ss_pred CCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecCCC
Q 013680 180 KSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLG 259 (438)
Q Consensus 180 ~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~ 259 (438)
.|.|.+.|++| ++.|.+++|+|+|++.. .....+.|+|.....+.|......+||||||+.
T Consensus 65 -----------~~~~~i~Yg~G--s~~G~~~~Dtv~i~~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~ 125 (383)
T 2ewy_A 65 -----------GFDVTVKYTQG--SWTGFVGEDLVTIPKGF------NTSFLVNIATIFESENFFLPGIKWNGILGLAYA 125 (383)
T ss_dssp -----------EEEEEEECSSC--EEEEEEEEEEEEETTTE------EEEEEEEEEEEEEEESCSCTTCCCCEEEECSCG
T ss_pred -----------CceEEEEECCc--EEEEEEEEEEEEECCCc------cceeEEEEEEEEeecceeeccCcCceEEecCch
Confidence 38999999997 57999999999998631 122347789987766655444567999999998
Q ss_pred CCCh--------hHHHHhhcCCcCcEEEEecC---------CCCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeE
Q 013680 260 DVSV--------PSLLAKAGLIQNSFSICFDE---------NDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESY 321 (438)
Q Consensus 260 ~~S~--------~~qL~~~g~i~~~FS~cL~~---------~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i 321 (438)
.++. ..+|++++.++++||+||.+ ...|.|+||++|+.+ .+++.|+|+... .+|.|.|++|
T Consensus 126 ~~s~~~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i 204 (383)
T 2ewy_A 126 TLAKPSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE-WYYQIEILKL 204 (383)
T ss_dssp GGCSSCTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB-TTBBCCEEEE
T ss_pred hcccccccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC-ceEEEEEEEE
Confidence 7764 34688888888899999953 256999999999876 467888888765 7999999999
Q ss_pred EecCeEeecC-----CcceEEcccCccccccHHHHHHHHHHHHHHhcccccccc--CccccceeecccccccCCCeEEEE
Q 013680 322 CIGNSCLTQS-----GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQ--GNSWKYCYNASSEEMLKVPDMRLI 394 (438)
Q Consensus 322 ~vg~~~~~~~-----~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~it~~ 394 (438)
+||++.+... ...+||||||++++||+++|++|.++|...........+ ......|+..+......+|+|+|+
T Consensus 205 ~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~ 284 (383)
T 2ewy_A 205 EIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIY 284 (383)
T ss_dssp EETTEECCCCTTTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEE
T ss_pred EECCEEccccccccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEE
Confidence 9999987532 357999999999999999999999998876543221111 011345765543333468999999
Q ss_pred EcCC-----cEEEEecceeEEeeCC-CCceEEEEE
Q 013680 395 FSKN-----QSFVVRNHIFSFPENE-VGDHACFSY 423 (438)
Q Consensus 395 f~gg-----~~~~l~~~~y~~~~~~-~~~~~Cl~~ 423 (438)
|.|+ .++.|++++|+++..+ +.+..|+++
T Consensus 285 f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~ 319 (383)
T 2ewy_A 285 LRDENSSRSFRITILPQLYIQPMMGAGLNYECYRF 319 (383)
T ss_dssp EECSSTTEEEEEEECHHHHEEEECCCTTCSEEEEE
T ss_pred ECCCCCCceEEEEEChHHheeecccCCCCceeEEE
Confidence 9654 2789999999987642 124589863
No 28
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=4.4e-44 Score=362.38 Aligned_cols=280 Identities=18% Similarity=0.231 Sum_probs=216.4
Q ss_pred ecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCC
Q 013680 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCK 180 (438)
Q Consensus 102 l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~ 180 (438)
+.+..+..|+++|.||||+|+|.|++||||+++||+|. |..| ++.|+|++|+|++..
T Consensus 15 l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~--------------~~~y~~~~SsT~~~~-------- 72 (395)
T 2qp8_A 15 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL--------------HRYYQRQLSSTYRDL-------- 72 (395)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC--------------SCCCCGGGCTTCEEE--------
T ss_pred cCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc--------------cCCcCcccCCCceeC--------
Confidence 34445778999999999999999999999999999995 5333 478999999999985
Q ss_pred CCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecCCCC
Q 013680 181 SRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGD 260 (438)
Q Consensus 181 ~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~ 260 (438)
.|.|.+.|++| +++|.+++|+|+|++.. .....+.|+|.....+.|......+||||||+..
T Consensus 73 ----------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~g~------~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~ 134 (395)
T 2qp8_A 73 ----------RKGVYVPYTQG--KWEGELGTDLVSIPHGP------NVTVRANIAAITESDKFFINGSNWEGILGLAYAE 134 (395)
T ss_dssp ----------EEEEEEECSSC--EEEEEEEEEEEECTTSC------SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGG
T ss_pred ----------CceEEEEECCc--EEEEEEEeEEEEECCCC------CceEEEEEEEEEccCcccccccCccceEEcCchh
Confidence 38999999997 56899999999998420 1222467888877666554344679999999987
Q ss_pred CCh--------hHHHHhhcCCcCcEEEEecC------------CCCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEe
Q 013680 261 VSV--------PSLLAKAGLIQNSFSICFDE------------NDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVE 319 (438)
Q Consensus 261 ~S~--------~~qL~~~g~i~~~FS~cL~~------------~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~ 319 (438)
++. +.+|+++++++++||+||.+ ...|.|+||++|+.+ .+++.|+|+... .+|.|.|+
T Consensus 135 ~s~~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~ 213 (395)
T 2qp8_A 135 IARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE-WYYEVIIV 213 (395)
T ss_dssp GCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB-TTBBCCEE
T ss_pred hccCCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCC-ceEEEEEE
Confidence 654 34799999988899999974 257999999999876 468888888765 79999999
Q ss_pred eEEecCeEeec-----CCcceEEcccCccccccHHHHHHHHHHHHHHhcccccccc--CccccceeecccccccCCCeEE
Q 013680 320 SYCIGNSCLTQ-----SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQ--GNSWKYCYNASSEEMLKVPDMR 392 (438)
Q Consensus 320 ~i~vg~~~~~~-----~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~it 392 (438)
+|+||++.+.. ....+||||||++++||+++|++|.++|............ ......|+..+......+|+|+
T Consensus 214 ~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~ 293 (395)
T 2qp8_A 214 RVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVIS 293 (395)
T ss_dssp EEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEE
T ss_pred EEEECCEEcccCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEE
Confidence 99999998752 1357999999999999999999999998776543221111 0112457655433334689999
Q ss_pred EEEcCCc-----EEEEecceeEEeeCC--CCceEEEE
Q 013680 393 LIFSKNQ-----SFVVRNHIFSFPENE--VGDHACFS 422 (438)
Q Consensus 393 ~~f~gg~-----~~~l~~~~y~~~~~~--~~~~~Cl~ 422 (438)
|+|.|+. +|.|++++|+++..+ +....|++
T Consensus 294 f~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~ 330 (395)
T 2qp8_A 294 LYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYK 330 (395)
T ss_dssp EEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEE
T ss_pred EEEccCCCCceEEEEECHHHhEeecccCCCCCceEEE
Confidence 9996553 699999999988643 12358975
No 29
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.8e-44 Score=355.54 Aligned_cols=266 Identities=18% Similarity=0.285 Sum_probs=214.0
Q ss_pred ccceEEEEEEeCCCCeEEEEEEECCCCceeEecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCC
Q 013680 106 FYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSS 184 (438)
Q Consensus 106 ~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~ 184 (438)
.+.+|+++|.|| +|+|.|++||||+++||+|. |..|. | ..++.|+|++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~---c-------~~~~~y~~~~Ss-~~~------------- 66 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSE---R-------SGHDYYTPGSSA-QKI------------- 66 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHH---H-------TTCCCBCCCTTC-EEE-------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCccc---c-------cCCCCCCccccC-Ccc-------------
Confidence 567899999999 89999999999999999996 65542 2 246899999998 553
Q ss_pred CCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecCCCCCCh-
Q 013680 185 CKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSV- 263 (438)
Q Consensus 185 C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~~S~- 263 (438)
+.|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||++.+.+.+......+||||||++.++.
T Consensus 67 -----~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 132 (323)
T 1izd_A 67 -----DGATWSISYGDG-SSASGDVYKDKVTVGGV--------SYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTV 132 (323)
T ss_dssp -----EEEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCC
T ss_pred -----CCCeEEEEcCCC-CeEEEEEEEEEEEECCE--------EECceEEEEEEeccccccccCCCceEEecCccccccc
Confidence 358999999996 56899999999999875 568999999999877654434679999999987664
Q ss_pred --------hHHHHhhcCCcCcEEEEecCCCCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEEecCeEeecCCcc
Q 013680 264 --------PSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQ 334 (438)
Q Consensus 264 --------~~qL~~~g~i~~~FS~cL~~~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vg~~~~~~~~~~ 334 (438)
..+|+++ +.+++||+||.++..|.|+||++|+.+ .+++.|+|+.....+|.|++++|+||+ .+......
T Consensus 133 ~p~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~~~~~~ 210 (323)
T 1izd_A 133 QPTPQKTFFDNVKSS-LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSSSDSIT 210 (323)
T ss_dssp BSSCCCCHHHHHGGG-SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEECCCEE
T ss_pred CCCCCCCHHHHHHHh-ccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cccCCCce
Confidence 4567766 448999999998778999999999987 468888888644579999999999999 66656778
Q ss_pred eEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEEEecceeEEeeCC
Q 013680 335 ALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENE 414 (438)
Q Consensus 335 aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~l~~~~y~~~~~~ 414 (438)
+||||||++++||+++|++|.++|. ++..... ..-|.++|. ..+|+|+|+| ||.++.|++++|+++..+
T Consensus 211 aiiDSGTs~~~lp~~~~~~i~~~i~---ga~~~~~-----~g~~~~~C~--~~~P~i~f~f-gg~~~~i~~~~~~~~~~~ 279 (323)
T 1izd_A 211 GIADTGTTLLLLDDSIVDAYYEQVN---GASYDSS-----QGGYVFPSS--ASLPDFSVTI-GDYTATVPGEYISFADVG 279 (323)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTST---TCEEETT-----TTEEEEETT--CCCCCEEEEE-TTEEEEECHHHHEEEECS
T ss_pred EEEeCCCcceeCCHHHHHHHHHhCC---CcEEcCc-----CCEEEEECC--CCCceEEEEE-CCEEEecCHHHeEEecCC
Confidence 9999999999999999887765442 1221111 112677887 4689999999 899999999999887643
Q ss_pred CCceEEEEEEEc
Q 013680 415 VGDHACFSYFTL 426 (438)
Q Consensus 415 ~~~~~Cl~~~~~ 426 (438)
...|++.+..
T Consensus 280 --~~~C~~~i~~ 289 (323)
T 1izd_A 280 --NGQTFGGIQS 289 (323)
T ss_dssp --TTEEEESEEE
T ss_pred --CCeEEEEEEc
Confidence 4689985543
No 30
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=3.2e-43 Score=356.87 Aligned_cols=278 Identities=18% Similarity=0.236 Sum_probs=216.4
Q ss_pred cccceEEEEEEeCCCCeEEEEEEECCCCceeEecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCCCCC
Q 013680 105 QFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRS 183 (438)
Q Consensus 105 ~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~ 183 (438)
..+..||++|.||||+|+|.|++||||+++||+|. | |. .++.|+|++|+|++..
T Consensus 25 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~------------~~~~y~~~~SsT~~~~----------- 79 (402)
T 3vf3_A 25 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF------------LHRYYQRQLSSTYRDL----------- 79 (402)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT------------CSCCCCGGGCTTCEEE-----------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Cc------------ccCCcCcccCcccccC-----------
Confidence 34568999999999999999999999999999995 4 21 2578999999999985
Q ss_pred CCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecCCCCCCh
Q 013680 184 SCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSV 263 (438)
Q Consensus 184 ~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~~S~ 263 (438)
.|.|.+.|++| ++.|.+++|+|+|++.. .....+.|+|.....+.+......+||||||+..++.
T Consensus 80 -------~~~~~i~Yg~G--s~~G~~~~D~v~ig~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~ 144 (402)
T 3vf3_A 80 -------RKGVYVPYTQG--KWEGELGTDLVSIPHGP------NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIAR 144 (402)
T ss_dssp -------EEEEEEECSSC--EEEEEEEEEEEECTTSC------SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCS
T ss_pred -------CCEEEEEECcE--EEEEEEEEEEEEECCcc------ccceeeeEEEEEccccccccCCCccceEEcCchhhcc
Confidence 48999999997 57999999999998531 1223456888888776665555779999999987654
Q ss_pred --------hHHHHhhcCCcCcEEEEecC------------CCCceEEeCcCCCCCc-eeeeeeecCCCCccEEEeEeeEE
Q 013680 264 --------PSLLAKAGLIQNSFSICFDE------------NDSGSVFFGDQGPATQ-QSTSFLPIGEKYDAYFVGVESYC 322 (438)
Q Consensus 264 --------~~qL~~~g~i~~~FS~cL~~------------~~~G~l~fG~~d~~~~-~~~p~v~~~~~~~~y~v~l~~i~ 322 (438)
+.+|++++++.++||+||.+ ...|.|+||++|+.+. +++.|+|+... .+|.|.+++|+
T Consensus 145 ~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i~ 223 (402)
T 3vf3_A 145 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE-WYYEVIIVRVE 223 (402)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSB-TTBEECEEEEE
T ss_pred cCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcC-cEEEEEEeEEE
Confidence 45799999998899999963 2469999999999874 68888888765 89999999999
Q ss_pred ecCeEeec-----CCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccC--ccccceeecccccccCCCeEEEEE
Q 013680 323 IGNSCLTQ-----SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQG--NSWKYCYNASSEEMLKVPDMRLIF 395 (438)
Q Consensus 323 vg~~~~~~-----~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~--~~~~~Cy~~~~~~~~~~P~it~~f 395 (438)
||++.+.. ....+||||||++++||+++|++|.++|............. .....|+.........+|+|+|+|
T Consensus 224 v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f 303 (402)
T 3vf3_A 224 INGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYL 303 (402)
T ss_dssp ETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEE
T ss_pred ECCEEecccccccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEE
Confidence 99998753 24579999999999999999999999998775422221111 113467665433334689999999
Q ss_pred cCCc-----EEEEecceeEEeeCCC--CceEEEEE
Q 013680 396 SKNQ-----SFVVRNHIFSFPENEV--GDHACFSY 423 (438)
Q Consensus 396 ~gg~-----~~~l~~~~y~~~~~~~--~~~~Cl~~ 423 (438)
.|+. ++.|++++|+++..+. ....|+++
T Consensus 304 ~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~ 338 (402)
T 3vf3_A 304 MGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKF 338 (402)
T ss_dssp ECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEE
T ss_pred ecCCCCceEEEEECHHHheehhccCCCCCceEEEE
Confidence 5543 5899999999986542 12589973
No 31
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2.1e-44 Score=355.21 Aligned_cols=266 Identities=17% Similarity=0.300 Sum_probs=212.2
Q ss_pred ccceEEEEEEeCCCCeEEEEEEECCCCceeEecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCC
Q 013680 106 FYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSS 184 (438)
Q Consensus 106 ~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~ 184 (438)
.+..|+++|.|| +|+|.|++||||+++||+|. |..|. | ..++.|+|++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~---c-------~~~~~y~~~~Ss-~~~------------- 66 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQ---Q-------SGHSVYNPSATG-KEL------------- 66 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHH---H-------TTSCCBCHHHHC-EEE-------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchh---c-------cCCCCCCcccCC-ccc-------------
Confidence 577899999999 89999999999999999996 65553 2 246899999998 553
Q ss_pred CCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecCCCCCCh-
Q 013680 185 CKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSV- 263 (438)
Q Consensus 185 C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~~S~- 263 (438)
+.|.|++.|++| +.+.|.+++|+|+|++. .++++.|||++.+++.+......+||||||++.++.
T Consensus 67 -----~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 132 (323)
T 1bxo_A 67 -----SGYTWSISYGDG-SSASGNVFTDSVTVGGV--------TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTV 132 (323)
T ss_dssp -----EEEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCC
T ss_pred -----CCCeEEEEeCCC-CeEEEEEEEEEEEECCE--------EECcEEEEEEEecCcccccCCCCceEEEeCccccccc
Confidence 358999999996 56899999999999875 568999999999877665444679999999986653
Q ss_pred --------hHHHHhhcCCcCcEEEEecCCCCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEeeEEecCeEeecCCcc
Q 013680 264 --------PSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQ 334 (438)
Q Consensus 264 --------~~qL~~~g~i~~~FS~cL~~~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vg~~~~~~~~~~ 334 (438)
..+|+++ +.+++||+||.++..|.|+||++|+.+ .+++.|+|+.....+|.|+|++|+||+ +......
T Consensus 133 ~~~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~~~~~~~ 209 (323)
T 1bxo_A 133 QPQSQTTFFDTVKSS-LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--QSGDGFS 209 (323)
T ss_dssp BSSCCCCHHHHHGGG-BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--EEEEEEE
T ss_pred ccCCCCCHHHHHHHh-cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--ccCCCce
Confidence 4567765 448999999998778999999999876 467778887544579999999999999 4445678
Q ss_pred eEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEEEEcCCcEEEEecceeEEeeCC
Q 013680 335 ALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENE 414 (438)
Q Consensus 335 aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~~f~gg~~~~l~~~~y~~~~~~ 414 (438)
+||||||++++||+++|++|.++|. ++..... ..-|.++|. ..+|+|+|+| ||.++.|++++|++...+
T Consensus 210 aiiDSGTs~~~lP~~~~~~l~~~i~---~a~~~~~-----~g~~~~~C~--~~~P~i~f~f-gg~~~~l~~~~~~~~~~~ 278 (323)
T 1bxo_A 210 GIADTGTTLLLLDDSVVSQYYSQVS---GAQQDSN-----AGGYVFDCS--TNLPDFSVSI-SGYTATVPGSLINYGPSG 278 (323)
T ss_dssp EEECTTCSSEEECHHHHHHHHTTST---TCEEETT-----TTEEEECTT--CCCCCEEEEE-TTEEEEECHHHHEEEECS
T ss_pred EEEeCCCCceeCCHHHHHHHHHhCC---CceEcCc-----CCEEEEECC--CCCceEEEEE-CCEEEEECHHHeEEeccC
Confidence 9999999999999999888765542 2221111 112677887 4689999999 899999999999887643
Q ss_pred CCceEEEEEEEc
Q 013680 415 VGDHACFSYFTL 426 (438)
Q Consensus 415 ~~~~~Cl~~~~~ 426 (438)
+ ...|++.+..
T Consensus 279 ~-~~~C~~~i~~ 289 (323)
T 1bxo_A 279 D-GSTCLGGIQS 289 (323)
T ss_dssp S-SSCEEESEEE
T ss_pred C-CCeEEEEEEC
Confidence 2 3689996654
No 32
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=4.3e-43 Score=361.34 Aligned_cols=281 Identities=18% Similarity=0.238 Sum_probs=220.8
Q ss_pred ecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCC
Q 013680 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCK 180 (438)
Q Consensus 102 l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~ 180 (438)
+.+..+..||++|.||||+|+|.|++||||+++||+|. | |. .++.|+|++|+||+..
T Consensus 68 l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~------------~~~~y~~~~SsT~~~~-------- 125 (455)
T 3lpj_A 68 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF------------LHRYYQRQLSSTYRDL-------- 125 (455)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT------------CSCCCCGGGCTTCEEE--------
T ss_pred ccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--cc------------cCCcccCCCCCCcccC--------
Confidence 34455678999999999999999999999999999996 4 31 2578999999999985
Q ss_pred CCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecCCCC
Q 013680 181 SRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGD 260 (438)
Q Consensus 181 ~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~ 260 (438)
.|.|.+.|++| ++.|.+++|+|+|++.. .+...+.|+|+....+.|......+||||||++.
T Consensus 126 ----------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~ 187 (455)
T 3lpj_A 126 ----------RKGVYVPYTQG--KWEGELGTDLVSIPHGP------NVTVRANIAAITESDKFFINGSNWEGILGLAYAE 187 (455)
T ss_dssp ----------EEEEEEECSSC--EEEEEEEEEEEECTTSC------SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGG
T ss_pred ----------CccEEEEeCCe--EEEEEEEEEEEEECCCc------ceeeEEEEEEEEccCcccccCCCcceEEEeCccc
Confidence 48999999997 56999999999998531 1223577999988877665555779999999987
Q ss_pred CCh--------hHHHHhhcCCcCcEEEEecC------------CCCceEEeCcCCCCC-ceeeeeeecCCCCccEEEeEe
Q 013680 261 VSV--------PSLLAKAGLIQNSFSICFDE------------NDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVE 319 (438)
Q Consensus 261 ~S~--------~~qL~~~g~i~~~FS~cL~~------------~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~ 319 (438)
++. +.+|++++++.++||+||.+ ...|.|+||++|+.+ .+++.|+|+... .+|.|.++
T Consensus 188 ~s~~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~ 266 (455)
T 3lpj_A 188 IARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE-WYYEVIIV 266 (455)
T ss_dssp GCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB-TTBBCCEE
T ss_pred cccccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCC-ceeEEEEe
Confidence 654 45799999998899999963 247999999999987 478888888775 89999999
Q ss_pred eEEecCeEeecC-----CcceEEcccCccccccHHHHHHHHHHHHHHhcccccccc--CccccceeecccccccCCCeEE
Q 013680 320 SYCIGNSCLTQS-----GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQ--GNSWKYCYNASSEEMLKVPDMR 392 (438)
Q Consensus 320 ~i~vg~~~~~~~-----~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~it 392 (438)
+|+||++.+... ...+||||||++++||+++|++|.++|.......+.... ......|+.........+|+|+
T Consensus 267 ~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~ 346 (455)
T 3lpj_A 267 RVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVIS 346 (455)
T ss_dssp EEEETTEECCCCGGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEE
T ss_pred EEEECCEEccccccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEE
Confidence 999999987532 457999999999999999999999999877543222111 1113456655433334589999
Q ss_pred EEEcCCc-----EEEEecceeEEeeCCCC--ceEEEEE
Q 013680 393 LIFSKNQ-----SFVVRNHIFSFPENEVG--DHACFSY 423 (438)
Q Consensus 393 ~~f~gg~-----~~~l~~~~y~~~~~~~~--~~~Cl~~ 423 (438)
|+|.|+. +|.|++++|+++..+.. ...|+++
T Consensus 347 f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f 384 (455)
T 3lpj_A 347 LYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKF 384 (455)
T ss_dssp EEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEE
T ss_pred EEEcCCCcCceEEEEECHHHheEeccCCCCCCceEEEE
Confidence 9995543 58999999999875421 2589974
No 33
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.9e-43 Score=333.71 Aligned_cols=224 Identities=27% Similarity=0.416 Sum_probs=187.3
Q ss_pred CceeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCC-CCcccccccCCCCCCCCCCCCCCCccccCC
Q 013680 97 SQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAP-LSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175 (438)
Q Consensus 97 ~~~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~-~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~ 175 (438)
+..++|.|+.+.+|+++|.||||+|+|.|++||||+++||+|. .|.. ..| ..++.|+|++|+|++..
T Consensus 2 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~--~C~~~~~C-------~~~~~y~~~~SsT~~~~--- 69 (239)
T 1b5f_A 2 SAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSS--KCINSKAC-------RAHSMYESSDSSTYKEN--- 69 (239)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSCHHH-------HTSCCBCGGGCTTCEEE---
T ss_pred CceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcC--CCCCCccc-------CCCCCCCCccCCCeeeC---
Confidence 4468899999999999999999999999999999999999995 4431 122 23578999999999985
Q ss_pred CcCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEee
Q 013680 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMG 255 (438)
Q Consensus 176 ~~~C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlG 255 (438)
.|.|.+.|++| ++.|.+++|+|+|++. .++++.|||++.+.+..+.....+||||
T Consensus 70 ---------------~~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~f~~~~~~GilG 124 (239)
T 1b5f_A 70 ---------------GTFGAIIYGTG--SITGFFSQDSVTIGDL--------VVKEQDFIEATDEADNVFLHRLFDGILG 124 (239)
T ss_dssp ---------------EEEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTTCSCCEEEE
T ss_pred ---------------CcEEEEEECCC--cEEEEEEEEEEEECCc--------EEccEEEEEEEeccCccccccCcceEEe
Confidence 48999999997 5899999999999875 5689999999987653333346799999
Q ss_pred cCCCCCChhH--HHHhhcCC-cCcEEEEecCC----CCceEEeCcCCCCCc-eeeeeeecCCCCccEEEeEeeEEecCeE
Q 013680 256 LGLGDVSVPS--LLAKAGLI-QNSFSICFDEN----DSGSVFFGDQGPATQ-QSTSFLPIGEKYDAYFVGVESYCIGNSC 327 (438)
Q Consensus 256 Lg~~~~S~~~--qL~~~g~i-~~~FS~cL~~~----~~G~l~fG~~d~~~~-~~~p~v~~~~~~~~y~v~l~~i~vg~~~ 327 (438)
||+..++.|. +|+++|++ +++||+||.++ ..|.|+||++|+.+. +++.|+|+... .+|.|.|++|+|+++.
T Consensus 125 Lg~~~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~ 203 (239)
T 1b5f_A 125 LSFQTISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ-YYWQFGIGDVLIGDKS 203 (239)
T ss_dssp CSCCSSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE-TTEEEEECCEEETTEE
T ss_pred cCccccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccC-CeEEEEeeEEEECCEE
Confidence 9999998654 48899988 79999999873 469999999998774 67777777654 7999999999999998
Q ss_pred ee--cCCcceEEcccCccccccHHHHHHHHHHH
Q 013680 328 LT--QSGFQALVDSGASFTFLPTEIYAEVVVKF 358 (438)
Q Consensus 328 ~~--~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~ 358 (438)
+. .....+||||||++++||+++|++|.++|
T Consensus 204 ~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~i 236 (239)
T 1b5f_A 204 TGFCAPGCQAFADSGTSLLSGPTAIVTQINHAI 236 (239)
T ss_dssp CCTTTTCEEEEECTTCSSEEECHHHHHHHHHHT
T ss_pred ecccCCCCEEEEecCcchhhCCHHHHHHHHHHh
Confidence 74 34568999999999999999988887554
No 34
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-42 Score=345.33 Aligned_cols=249 Identities=20% Similarity=0.345 Sum_probs=203.8
Q ss_pred eeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcC
Q 013680 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPL 178 (438)
Q Consensus 99 ~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~ 178 (438)
.+++.|+ +..|+++|.||||+|+|.|++||||+++||+| .+.|+|++|+++.
T Consensus 4 ~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~-------------------~~~y~~s~Ss~~~-------- 55 (340)
T 1wkr_A 4 SVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGA-------------------DKSYVKTSTSSAT-------- 55 (340)
T ss_dssp EEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECS-------------------SSCCCCCTTCEEE--------
T ss_pred cEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecC-------------------CCccCCcCCcccc--------
Confidence 3667776 56899999999999999999999999999988 2579998887543
Q ss_pred CCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEeccCCCCCCCCcccccEEEEeEEeccCCCCCCCCCceEeecCC
Q 013680 179 CKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGL 258 (438)
Q Consensus 179 C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~ 258 (438)
.|.|.+.|++| +++|.+++|+|+|++. .++++.|||++.+.+ + ...+||||||+
T Consensus 56 ------------~~~~~i~Yg~G--s~~G~~~~Dtv~~g~~--------~v~~~~fg~~~~~~~-~---~~~~GilGLg~ 109 (340)
T 1wkr_A 56 ------------SDKVSVTYGSG--SFSGTEYTDTVTLGSL--------TIPKQSIGVASRDSG-F---DGVDGILGVGP 109 (340)
T ss_dssp ------------EEEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEEES-C---TTCSEEEECSC
T ss_pred ------------CceEEEEECCc--EEEEEEEEEEEEECCE--------EEcceEEEEEEccCC-C---cCCCcEEECCc
Confidence 38999999997 5899999999999875 568999999999876 3 25699999999
Q ss_pred CCCCh--------------hHHHHhhcCC-cCcEEEEecCC-----CCceEEeCcCCCCC-ceeeeeeecCCC---CccE
Q 013680 259 GDVSV--------------PSLLAKAGLI-QNSFSICFDEN-----DSGSVFFGDQGPAT-QQSTSFLPIGEK---YDAY 314 (438)
Q Consensus 259 ~~~S~--------------~~qL~~~g~i-~~~FS~cL~~~-----~~G~l~fG~~d~~~-~~~~p~v~~~~~---~~~y 314 (438)
..++. +.+|+++|+| +++||+||.+. ..|.|+||++|+.+ .+++.|+|+... ..+|
T Consensus 110 ~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w 189 (340)
T 1wkr_A 110 VDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYW 189 (340)
T ss_dssp GGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSS
T ss_pred cccccccccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceE
Confidence 87654 4568999999 79999999863 36999999999876 356777776653 4799
Q ss_pred EEeEeeEEecC-eEeecCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCccccceeecccccccCCCeEEE
Q 013680 315 FVGVESYCIGN-SCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNASSEEMLKVPDMRL 393 (438)
Q Consensus 315 ~v~l~~i~vg~-~~~~~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~it~ 393 (438)
.|. ++|+|++ +.+. ....+||||||++++||+++|++|.+++. +..... ..+|.++|.....+|+|+|
T Consensus 190 ~v~-~~i~v~~~~~l~-~~~~aiiDSGTt~~~lP~~~~~~l~~~~~----a~~~~~-----~g~~~~~C~~~~~~p~i~f 258 (340)
T 1wkr_A 190 GIN-QSIRYGSSTSIL-SSTAGIVDTGTTLTLIASDAFAKYKKATG----AVADNN-----TGLLRLTTAQYANLQSLFF 258 (340)
T ss_dssp EEE-EEEEETTTEEEE-EEEEEEECTTBCSEEECHHHHHHHHHHHT----CEECTT-----TSSEEECHHHHHTCCCEEE
T ss_pred EEE-eeEEECCCeEcc-CCCeEEEeCCcccccCCHHHHHHHHHhhC----CEEcCC-----CCeEEeeccccccCCcEEE
Confidence 999 9999998 8775 34589999999999999999888876553 222111 2247889976678999999
Q ss_pred EEcCCcEEEEecceeEEeeC
Q 013680 394 IFSKNQSFVVRNHIFSFPEN 413 (438)
Q Consensus 394 ~f~gg~~~~l~~~~y~~~~~ 413 (438)
+| +|..|.|++++|+++..
T Consensus 259 ~f-~g~~~~i~~~~yi~~~~ 277 (340)
T 1wkr_A 259 TI-GGQTFELTANAQIWPRN 277 (340)
T ss_dssp EE-TTEEEEECTGGGBCCGG
T ss_pred EE-CCEEEEEcHHHhccccc
Confidence 99 88999999999988653
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.96 E-value=1.6e-28 Score=231.58 Aligned_cols=187 Identities=21% Similarity=0.339 Sum_probs=152.1
Q ss_pred cccccEEEEeEEeccCCCCCCCCCceEeecCCCCCCh------hHHHHhhcCC-cCcEEEEecCCC----CceEEeCcCC
Q 013680 227 SVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSV------PSLLAKAGLI-QNSFSICFDEND----SGSVFFGDQG 295 (438)
Q Consensus 227 ~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~~S~------~~qL~~~g~i-~~~FS~cL~~~~----~G~l~fG~~d 295 (438)
..++++.|||++.+.+.++.....|||||||++.++. ..+|+++|++ +++||+||.++. .|.|+||++|
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 3568999999999988666555789999999987664 4679999998 899999998752 7999999999
Q ss_pred CCCc-eeeeeeecCCCCccEEEeEeeEEecCeEe-ecCCcceEEcccCccccccHHHHHHHHHHHHHHhccccccccCcc
Q 013680 296 PATQ-QSTSFLPIGEKYDAYFVGVESYCIGNSCL-TQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNS 373 (438)
Q Consensus 296 ~~~~-~~~p~v~~~~~~~~y~v~l~~i~vg~~~~-~~~~~~aiiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~ 373 (438)
+.++ +++.|+|+... .+|.|.+++|+|+++.+ ......+||||||++++||+++|++|.+++. +.....
T Consensus 83 ~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~----~~~~~~---- 153 (241)
T 1lya_B 83 SKYYKGSLSYLNVTRK-AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIG----AVPLIQ---- 153 (241)
T ss_dssp GGGEEEEEEEEECSSB-TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHT----CEEEET----
T ss_pred HHHcCCceEEEECccc-cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhC----CeeccC----
Confidence 9874 78889988765 89999999999999874 3456789999999999999999888876653 322211
Q ss_pred ccceeecccccccCCCeEEEEEcCCcEEEEecceeEEeeCCCCceEEEEEEE
Q 013680 374 WKYCYNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEVGDHACFSYFT 425 (438)
Q Consensus 374 ~~~Cy~~~~~~~~~~P~it~~f~gg~~~~l~~~~y~~~~~~~~~~~Cl~~~~ 425 (438)
..|.++|.....+|+|+|+| +|.++.|++++|+++..+.....|+..+.
T Consensus 154 --g~~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~ 202 (241)
T 1lya_B 154 --GEYMIPCEKVSTLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFM 202 (241)
T ss_dssp --TEEEEEGGGGGGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEE
T ss_pred --CcEEEECCCCccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEE
Confidence 12778898777899999999 89999999999999875432468996443
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.88 E-value=7e-23 Score=164.98 Aligned_cols=92 Identities=29% Similarity=0.458 Sum_probs=78.8
Q ss_pred ceeeecccccceEEEEEEeCCCCeEEEEEEECCCCceeEecCCCCCCC--CCcccccccCCCCCCCCCCCCCCCccccCC
Q 013680 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAP--LSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175 (438)
Q Consensus 98 ~~~~l~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~C~~C~~--~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~ 175 (438)
..++|.|+.+..|+++|.||||+|+|.|+|||||+++||+|. .|.. ..| ..++.|+|++|+|++..
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~--~C~~~~~~C-------~~~~~y~p~~SsT~~~~--- 70 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSI--HCKLLDIAC-------WIHHKYNSDKSSTYVKN--- 70 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCTTCHHH-------HTSCCBCGGGCTTCEEE---
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEc--CccCccccc-------CCCCCCCchhCCCceeC---
Confidence 357788888999999999999999999999999999999994 4432 122 23689999999999985
Q ss_pred CcCCCCCCCCCCCCCCCceeEecCCCCceEEEEEEEEEEEecc
Q 013680 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLAS 218 (438)
Q Consensus 176 ~~~C~~~~~C~~~~~~c~y~~~Y~~g~s~~~G~l~~D~l~l~~ 218 (438)
.|.|.+.|++| ++.|.+++|+|+|++
T Consensus 71 ---------------~~~~~i~Yg~G--s~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 71 ---------------GTSFDIHYGSG--SLSGYLSQDTVSVPC 96 (97)
T ss_dssp ---------------EEEEEEECSSC--EEEEEEEEEEEEESC
T ss_pred ---------------CCcEEEEECCc--EEEEEEEEEEEEECC
Confidence 48999999997 589999999999975
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=98.02 E-value=6.4e-06 Score=64.03 Aligned_cols=58 Identities=14% Similarity=0.244 Sum_probs=43.9
Q ss_pred eecccccccCCCeEEEEEcCCcEEEEecceeEEeeCCCCceEEEEEEEcCC--CceeEEEe
Q 013680 378 YNASSEEMLKVPDMRLIFSKNQSFVVRNHIFSFPENEVGDHACFSYFTLEY--NFTGILIL 436 (438)
Q Consensus 378 y~~~~~~~~~~P~it~~f~gg~~~~l~~~~y~~~~~~~~~~~Cl~~~~~~~--~~~g~~il 436 (438)
|.++|+....+|+|+|+| ||.++.|++++|+++..++....|++.+...+ .....|||
T Consensus 3 y~v~C~~~~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~IL 62 (87)
T 1b5f_B 3 LQVDCNTLSSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWIL 62 (87)
T ss_dssp CEECGGGGGGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEE
T ss_pred EEEECCCCCcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEe
Confidence 778998777899999999 89999999999999875433468997555422 22346766
No 38
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=81.34 E-value=1.6 Score=34.45 Aligned_cols=27 Identities=22% Similarity=0.244 Sum_probs=23.3
Q ss_pred EEEEEEeCCCCeEEEEEEECCCCceeEec
Q 013680 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPC 138 (438)
Q Consensus 110 y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~ 138 (438)
-++.|.|| .|.+.+++|||.|.+-+..
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 34678999 7999999999999999973
No 39
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=80.59 E-value=1.8 Score=33.79 Aligned_cols=26 Identities=23% Similarity=0.167 Sum_probs=22.8
Q ss_pred EEEEEeCCCCeEEEEEEECCCCceeEec
Q 013680 111 YTWIDIGTPNVSFLVALDAGSNLLWVPC 138 (438)
Q Consensus 111 ~~~i~iGTP~q~~~v~~DTGS~~~Wv~~ 138 (438)
++.|.|| .|.+.+++|||.|++-+..
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEE 35 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEec
Confidence 4668898 6999999999999999965
No 40
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=77.84 E-value=2.2 Score=34.08 Aligned_cols=27 Identities=15% Similarity=0.289 Sum_probs=23.3
Q ss_pred EEEEeC---CCCeEEEEEEECCCCceeEec
Q 013680 112 TWIDIG---TPNVSFLVALDAGSNLLWVPC 138 (438)
Q Consensus 112 ~~i~iG---TP~q~~~v~~DTGS~~~Wv~~ 138 (438)
+.|.|| +|+|.+..++|||.|++-+..
T Consensus 13 vtikI~~~~~~Gq~~eaLLDTGADdTVl~~ 42 (116)
T 3liy_A 13 IKAQVDTQTSHPKTIEALLDTGADMTVIPI 42 (116)
T ss_dssp EEEEEECSSSCCEEEEEEECTTBSSCEEEG
T ss_pred EEEEEccccCCCeEeEEEeccCCCccEEec
Confidence 445666 889999999999999999987
No 41
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=76.05 E-value=2.8 Score=32.72 Aligned_cols=26 Identities=23% Similarity=0.090 Sum_probs=22.7
Q ss_pred EEEEEeCCCCeEEEEEEECCCCceeEec
Q 013680 111 YTWIDIGTPNVSFLVALDAGSNLLWVPC 138 (438)
Q Consensus 111 ~~~i~iGTP~q~~~v~~DTGS~~~Wv~~ 138 (438)
++.|.|| +|.+.+++|||.|.+-+..
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~ 35 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAG 35 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESS
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcC
Confidence 4568898 7999999999999999965
No 42
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=71.56 E-value=3.9 Score=32.89 Aligned_cols=25 Identities=16% Similarity=0.206 Sum_probs=22.1
Q ss_pred EEEEEeCCCCeEEEEEEECCCCceeEec
Q 013680 111 YTWIDIGTPNVSFLVALDAGSNLLWVPC 138 (438)
Q Consensus 111 ~~~i~iGTP~q~~~v~~DTGS~~~Wv~~ 138 (438)
+. |.|| .|.+.+++|||.|++-+.-
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEcc
Confidence 45 8999 7999999999999999975
No 43
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=67.24 E-value=5.1 Score=33.22 Aligned_cols=30 Identities=20% Similarity=0.235 Sum_probs=25.6
Q ss_pred cceEEEEEEeCCCCeEEEEEEECCCCceeEec
Q 013680 107 YWLHYTWIDIGTPNVSFLVALDAGSNLLWVPC 138 (438)
Q Consensus 107 ~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~ 138 (438)
...+++++.|+ ++++.+++|||++.+-+..
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 34578899998 6899999999999998865
No 44
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=62.84 E-value=8.3 Score=30.80 Aligned_cols=25 Identities=8% Similarity=0.152 Sum_probs=22.2
Q ss_pred EEEEeCCCCeEEEEEEECCCCceeEec
Q 013680 112 TWIDIGTPNVSFLVALDAGSNLLWVPC 138 (438)
Q Consensus 112 ~~i~iGTP~q~~~v~~DTGS~~~Wv~~ 138 (438)
+.|.|| +|.+..++|||.|.+-+..
T Consensus 12 vti~I~--Gq~~eaLLDTGADdTVi~~ 36 (114)
T 3sqf_A 12 LTLWLD--DKMFTGLINTGADVTIIKL 36 (114)
T ss_dssp EEEEET--TEEEEEEECTTCSSCEEEG
T ss_pred EEEEEC--CEEEEEEEccCCCceEEec
Confidence 457888 7999999999999999976
No 45
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=61.00 E-value=8.2 Score=31.92 Aligned_cols=34 Identities=26% Similarity=0.399 Sum_probs=25.6
Q ss_pred ccEEEeEeeEEecCeEeecCCcceEEcccCccccccHHHHHH
Q 013680 312 DAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAE 353 (438)
Q Consensus 312 ~~y~v~l~~i~vg~~~~~~~~~~aiiDSGTs~t~Lp~~~y~~ 353 (438)
..+.|. +.|||+.+. ++||||.+.+.++.+..+.
T Consensus 25 ~~~~v~---v~InG~~~~-----~LvDTGAs~s~is~~~a~~ 58 (148)
T 2i1a_A 25 PMLYIN---IEINNYPVK-----AFVDTGAQTTIMSTRLAKK 58 (148)
T ss_dssp CCCEEE---EEETTEEEE-----EEECTTCSSCEEEHHHHHH
T ss_pred ceEEEE---EEECCEEEE-----EEEECCCCccccCHHHHHH
Confidence 345554 678888554 9999999999999887443
No 46
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=60.45 E-value=8 Score=32.37 Aligned_cols=29 Identities=10% Similarity=0.220 Sum_probs=25.4
Q ss_pred eEEEEEEeCCCCeEEEEEEECCCCceeEecC
Q 013680 109 LHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ 139 (438)
Q Consensus 109 ~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~~ 139 (438)
.+|+++.|. .+++++++|||++.+.+...
T Consensus 24 ~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 24 MLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred EEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 578888997 69999999999999999764
No 47
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=58.27 E-value=7.1 Score=32.71 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=26.3
Q ss_pred ccEEEeEeeEEecCeEeecCCcceEEcccCccccccHHHHHHH
Q 013680 312 DAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEV 354 (438)
Q Consensus 312 ~~y~v~l~~i~vg~~~~~~~~~~aiiDSGTs~t~Lp~~~y~~l 354 (438)
..++|+ +.|||+.+. ++||||.+.+.++.+..+++
T Consensus 23 ~~l~v~---~~Ing~~v~-----~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 23 TMLYIN---CKVNGHPLK-----AFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp CCCEEE---EEETTEEEE-----EEECTTCSSCEEEHHHHHHT
T ss_pred CEEEEE---EEECCEEEE-----EEEeCCCCcEeeCHHHHHHc
Confidence 345555 447887664 89999999999999985444
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=48.86 E-value=17 Score=29.84 Aligned_cols=27 Identities=11% Similarity=0.143 Sum_probs=22.6
Q ss_pred EEEEEEeCCCCeEEEEEEECCCCceeEec
Q 013680 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPC 138 (438)
Q Consensus 110 y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~ 138 (438)
-++.+.|+ .|++.+++|||.+.+-+..
T Consensus 23 P~v~i~I~--G~~~~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 23 PRITLKVG--GQPVTFLVDTGAQHSVLTQ 49 (132)
T ss_dssp SEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CEEEEEEC--CEEEEEEEeCCCCeEEEcc
Confidence 34567888 6999999999999999865
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=46.79 E-value=17 Score=29.46 Aligned_cols=19 Identities=21% Similarity=0.368 Sum_probs=17.2
Q ss_pred CeEEEEEEECCCCceeEec
Q 013680 120 NVSFLVALDAGSNLLWVPC 138 (438)
Q Consensus 120 ~q~~~v~~DTGS~~~Wv~~ 138 (438)
.|.+..++|||.|++-+..
T Consensus 29 gq~~eaLLDTGAD~TVl~~ 47 (124)
T 2rsp_A 29 SVYITALLDSGADITIISE 47 (124)
T ss_dssp EEEEEEEECTTCSSCEEET
T ss_pred CEEEEEEecCCCCcEEEec
Confidence 5888999999999999976
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=42.98 E-value=22 Score=31.42 Aligned_cols=26 Identities=23% Similarity=0.147 Sum_probs=22.4
Q ss_pred EEEEEeCCCCeEEEEEEECCCCceeEec
Q 013680 111 YTWIDIGTPNVSFLVALDAGSNLLWVPC 138 (438)
Q Consensus 111 ~~~i~iGTP~q~~~v~~DTGS~~~Wv~~ 138 (438)
.+.|.|| +|.+..++|||.|.+-+..
T Consensus 10 ~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 10 LVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEec
Confidence 4568888 7999999999999998854
No 51
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=38.71 E-value=31 Score=32.36 Aligned_cols=41 Identities=15% Similarity=0.287 Sum_probs=28.5
Q ss_pred eeeeeeecCCCCccEEEeEeeEEecCeEeecCCcceEEcccCccccccHH
Q 013680 300 QSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (438)
Q Consensus 300 ~~~p~v~~~~~~~~y~v~l~~i~vg~~~~~~~~~~aiiDSGTs~t~Lp~~ 349 (438)
++++..+...+ ..|.++ |.||.+ .+.++||||++.+++|..
T Consensus 4 g~v~~~~~~~~-~~Y~~~---i~iG~Q-----~~~v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 4 GVATNTPTAND-EEYITP---VTIGGT-----TLNLNFDTGSADLWVFST 44 (323)
T ss_dssp EEEEEEECGGG-SCEEEE---EEETTE-----EEEEEEETTCCCEEECBT
T ss_pred CceeeeecCCC-CEEEEE---EEECCE-----EEEEEEeCCCcceEEecC
Confidence 45555555443 567654 678843 346999999999999865
No 52
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=38.36 E-value=36 Score=31.96 Aligned_cols=42 Identities=17% Similarity=0.288 Sum_probs=29.2
Q ss_pred eeeeeeecCCCCccEEEeEeeEEecCeEeecCCcceEEcccCccccccHHH
Q 013680 300 QSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEI 350 (438)
Q Consensus 300 ~~~p~v~~~~~~~~y~v~l~~i~vg~~~~~~~~~~aiiDSGTs~t~Lp~~~ 350 (438)
++.+..+...+ ..|.++ |.||.+ .+.++||||++.+++|..-
T Consensus 3 ~~v~~~~~~~~-~~Y~~~---i~iG~Q-----~~~v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 3 GSAVTTPQNND-EEYLTP---VTVGKS-----TLHLDFDTGSADLWVFSDE 44 (325)
T ss_dssp EEEEEEECTTT-SCEEEE---EEEBTE-----EEEEEEETTCCCEEEECTT
T ss_pred ceEEeEEcCCC-CEEEEE---EEECCE-----EEEEEEeCCCccceEeeCC
Confidence 45566565544 667654 667743 4469999999999998753
No 53
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=33.93 E-value=42 Score=31.44 Aligned_cols=42 Identities=14% Similarity=0.264 Sum_probs=28.2
Q ss_pred eeeeeeecCCCCccEEEeEeeEEecCeEeecCCcceEEcccCccccccHHH
Q 013680 300 QSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEI 350 (438)
Q Consensus 300 ~~~p~v~~~~~~~~y~v~l~~i~vg~~~~~~~~~~aiiDSGTs~t~Lp~~~ 350 (438)
++.+..+...+ ..|.++ |.||.+ .+.++||||++.+++|..-
T Consensus 4 ~~v~~~~~~~~-~~Y~~~---i~iG~q-----~~~v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 4 GSVTTNPTSND-EEYITQ---VTVGDD-----TLGLDFDTGSADLWVFSSQ 45 (323)
T ss_dssp EEEEEEECGGG-CCEEEE---EEETTE-----EEEEEEETTCCCEEECBTT
T ss_pred CceeeeEcCCC-CEEEEE---EEECCE-----EEEEEEcCCCcceEEecCC
Confidence 44555454433 567654 678833 4569999999999998753
No 54
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=26.70 E-value=71 Score=29.88 Aligned_cols=43 Identities=19% Similarity=0.186 Sum_probs=27.4
Q ss_pred eeeeee-ecCCCCccEEEeEeeEEecCeEeecCCcceEEcccCccccccHH
Q 013680 300 QSTSFL-PIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (438)
Q Consensus 300 ~~~p~v-~~~~~~~~y~v~l~~i~vg~~~~~~~~~~aiiDSGTs~t~Lp~~ 349 (438)
++.+.. +...+ ..|.+ .|.||.- ...+.++||||++.+++|..
T Consensus 3 ~~v~~~~~~~~~-~~Y~~---~i~iGTP---~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 3c9x_A 3 GSAPNHPSDSAD-SEYIT---SVSIGTP---AQVLPLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEEESSTTC-CCEEE---EEEETTT---TEEEEEEEETTCCCEEECBT
T ss_pred cceeeecCCCCC-CEEEE---EEEECCC---CeEEEEEEcCCCCCeEEecC
Confidence 345555 43333 56765 4778831 11345999999999999865
No 55
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=26.65 E-value=58 Score=28.65 Aligned_cols=27 Identities=22% Similarity=0.128 Sum_probs=22.9
Q ss_pred EEEEEEeCCCCeEEEEEEECCCCceeEec
Q 013680 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPC 138 (438)
Q Consensus 110 y~~~i~iGTP~q~~~v~~DTGS~~~Wv~~ 138 (438)
=.+.+.|| +|.+..++|||.|.+-+..
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeec
Confidence 34678888 6999999999999998854
No 56
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=25.18 E-value=79 Score=29.56 Aligned_cols=42 Identities=21% Similarity=0.215 Sum_probs=26.8
Q ss_pred eeeee-ecCCCCccEEEeEeeEEecCeEeecCCcceEEcccCccccccHH
Q 013680 301 STSFL-PIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (438)
Q Consensus 301 ~~p~v-~~~~~~~~y~v~l~~i~vg~~~~~~~~~~aiiDSGTs~t~Lp~~ 349 (438)
+.+.. +...+ ..|.+ .|.||.- ...+.++||||++.+++|..
T Consensus 4 ~v~~~~~~~~~-~~Y~~---~i~iGTP---~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 4 SATTTPIDSLD-DAYIT---PVQIGTP---AQTLNLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEESSTTC-CCEEE---EEEETTT---TEEEEEEEETTCCCEEECBT
T ss_pred eeEeeecCCCC-CEEEE---EEEECCC---CeEEEEEECCCCCCeEEecC
Confidence 44554 43333 56765 4778831 12345999999999999864
No 57
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=25.15 E-value=69 Score=29.92 Aligned_cols=40 Identities=20% Similarity=0.346 Sum_probs=26.7
Q ss_pred eeeeeecCCCCccEEEeEeeEEec--CeEeecCCcceEEcccCccccccHH
Q 013680 301 STSFLPIGEKYDAYFVGVESYCIG--NSCLTQSGFQALVDSGASFTFLPTE 349 (438)
Q Consensus 301 ~~p~v~~~~~~~~y~v~l~~i~vg--~~~~~~~~~~aiiDSGTs~t~Lp~~ 349 (438)
+.+..+...+ ..|.++ |.|| .+. +.++||||++.+++|..
T Consensus 5 ~v~~~~~~~~-~~Y~~~---i~iGTP~q~-----~~v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 5 TVPMTDYGND-IEYYGQ---VTIGTPGKK-----FNLDFDTGSSDLWIAST 46 (325)
T ss_dssp EEEEEEETTT-TEEEEE---EEETTTTEE-----EEEEEETTCCCCEEEBT
T ss_pred ceeeeecCCC-CEEEEE---EEECCCCeE-----EEEEEcCCCCCEEEccC
Confidence 4444443333 567654 6788 444 45999999999999864
Done!