BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013681
(438 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3U9I|A Chain A, The Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Roseiflexus Sp.
pdb|3U9I|B Chain B, The Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Roseiflexus Sp
Length = 393
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 117/335 (34%), Positives = 168/335 (50%), Gaps = 22/335 (6%)
Query: 91 ENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTK----ALVKVREACQFLRQSPPTTLNF 146
E N+ + VEL++G G+GE A P G+ A++ R + +
Sbjct: 53 EVARNLLVAVELTDGTRGYGEAAPFPAFNGETQDMAHAAILAARSLVEGADVREWRRIAL 112
Query: 147 ALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPA 206
AL LPG S R +E A++DA+ +PLW FGGA+ SL T +TI S
Sbjct: 113 ALPA----LPGMT-GSARCAIETAILDALTRRARLPLWAFFGGAATSLETDVTITTGSVT 167
Query: 207 EASELASKYCKLGFSTLKLNVG---------RNITADFDVLQAIHAVHPHCSFILDANEG 257
A+ A G +T+K+ +G R + D + AI V P ILD N G
Sbjct: 168 AAARAAQAIVARGVTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDVAPTARLILDGNCG 227
Query: 258 YTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLN 317
YT+ +A+ +L L G++P LFEQPV +DD GL ++ R + V ADES S
Sbjct: 228 YTAPDALRLLDMLGVHGIVPALFEQPVAKDDEEGLRRLTATRR----VPVAADESVASAT 283
Query: 318 DVQKVMQENLASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAA 377
D ++ + V+NIKL K G++ L I R +GLHLMI GM+E+ LA + AA
Sbjct: 284 DAARLARNAAVDVLNIKLMKCGIVEALDIAAIARTAGLHLMIGGMVESLLAMTVSACFAA 343
Query: 378 GLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFT 412
G G ++V+L+TP L+E+PF GG G + T
Sbjct: 344 GQGGFRFVDLDTPLFLAENPFDGGMTYHGGTIDLT 378
>pdb|3IK4|A Chain A, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING PROTEIN From Herpetosiphon Aurantiacus
pdb|3IK4|B Chain B, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING PROTEIN From Herpetosiphon Aurantiacus
pdb|3IK4|C Chain C, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING PROTEIN From Herpetosiphon Aurantiacus
pdb|3IK4|D Chain D, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING PROTEIN From Herpetosiphon Aurantiacus
Length = 365
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/329 (35%), Positives = 172/329 (52%), Gaps = 14/329 (4%)
Query: 95 NVAIRVELSNGCVGWGEVAVVPLVTGD-QTKALVKVREACQFLRQSPPT---TLNFALDE 150
NV ++V+L++G +G GE A P V+G+ QT + L + L LD
Sbjct: 35 NVLVKVQLADGTLGLGEAAPFPAVSGETQTGTSAAIERLQSHLLGADVRGWRKLAAMLDH 94
Query: 151 IARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASE 210
E A+ R G+EMA++DA+ +PL FGG S L T +TI A A+
Sbjct: 95 AE-----HEAAAARCGLEMAMLDALTRHYHMPLHVFFGGVSKQLETDMTITAGDEVHAAA 149
Query: 211 LASKYCKLGFSTLKLNV-GRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGK 269
A G ++K+ G ++ D L+AIH P I+D N GY E A+
Sbjct: 150 SAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQAAPTAPLIVDGNCGYDVERALAFCAA 209
Query: 270 LNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLAS 329
+ VLFEQP+ R+DW+G+ V+ G +V ADES RS +DV ++ +E AS
Sbjct: 210 CKAESIPMVLFEQPLPREDWAGMAQVTA----QSGFAVAADESARSAHDVLRIAREGTAS 265
Query: 330 VVNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNT 389
V+NIKL K GV L++I + +GL LMI GM+E+ LA F+ +LAAG G +++L+T
Sbjct: 266 VINIKLMKAGVAEGLKMIAIAQAAGLGLMIGGMVESILAMSFSANLAAGNGGFDFIDLDT 325
Query: 390 PFLLSEDPFVGGCEVSGAIYNFTNARGQG 418
P ++E PF+GG +G + G G
Sbjct: 326 PLFIAEHPFIGGFAQTGGTLQLADVAGHG 354
>pdb|3S5S|A Chain A, Crystal Structure Of Putative Mandelate RacemaseMUCONATE
LACTONIZING Enzyme (PsiCOM TARGET 200551) FROM SORANGIUM
CELLULOSUM
pdb|3S5S|B Chain B, Crystal Structure Of Putative Mandelate RacemaseMUCONATE
LACTONIZING Enzyme (PsiCOM TARGET 200551) FROM SORANGIUM
CELLULOSUM
Length = 389
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 174/330 (52%), Gaps = 13/330 (3%)
Query: 91 ENVENVAIRVELSNGCVGWGEVAVVPLVTGD----QTKALVKVREACQFLRQSPPTTLNF 146
E N+ + VEL++G +G+GE A +P G+ A V +REA +
Sbjct: 31 ERAANLLVTVELADGTLGFGEAAPLPAFNGETQDGSRAAAVSLREAVVGSDARAWRAVAR 90
Query: 147 ALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPA 206
AL E + + R +E A++DA+ +PLW FGG+ +L+T ITI SP
Sbjct: 91 ALREASG----GGAGAARCAIETAILDALTKRAGMPLWAFFGGSGTALTTDITITTGSPE 146
Query: 207 EASELASKYCKLGFSTLKLNVGRNITA-DFDVLQAIHAVHPHCSFILDANEGYTSEEAVE 265
A E A + +GF LK+ VG + A D ++AIHA P S ILD N G T+ EA+
Sbjct: 147 RAEEAARRAAAMGFRALKVKVGGRLAASDPARIEAIHAAAPGASLILDGNGGLTAGEALA 206
Query: 266 VLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQE 325
++ +G L EQPV RDDW G+ +V+ A G+ V ADES S DV +V E
Sbjct: 207 LVAHARRLGADVALLEQPVPRDDWDGMKEVTRRA----GVDVAADESAASAEDVLRVAAE 262
Query: 326 NLASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYV 385
A+VVNIKL K G+ L I R +GL LMI GM+E+ LA + AAGLG +V
Sbjct: 263 RAATVVNIKLMKGGIAEALDIAAVARAAGLGLMIGGMVESVLAMTASACFAAGLGGFSFV 322
Query: 386 NLNTPFLLSEDPFVGGCEVSGAIYNFTNAR 415
+L+TP L+E+PF GG G + R
Sbjct: 323 DLDTPLFLAENPFDGGFVQRGPALSLEGIR 352
>pdb|1JPM|A Chain A, L-ala-d/l-glu Epimerase
pdb|1JPM|B Chain B, L-ala-d/l-glu Epimerase
pdb|1JPM|C Chain C, L-ala-d/l-glu Epimerase
pdb|1JPM|D Chain D, L-ala-d/l-glu Epimerase
pdb|1TKK|A Chain A, The Structure Of A Substrate-Liganded Complex Of The
L-Ala- DL-Glu Epimerase From Bacillus Subtilis
pdb|1TKK|B Chain B, The Structure Of A Substrate-Liganded Complex Of The
L-Ala- DL-Glu Epimerase From Bacillus Subtilis
pdb|1TKK|C Chain C, The Structure Of A Substrate-Liganded Complex Of The
L-Ala- DL-Glu Epimerase From Bacillus Subtilis
pdb|1TKK|D Chain D, The Structure Of A Substrate-Liganded Complex Of The
L-Ala- DL-Glu Epimerase From Bacillus Subtilis
pdb|1TKK|E Chain E, The Structure Of A Substrate-Liganded Complex Of The
L-Ala- DL-Glu Epimerase From Bacillus Subtilis
pdb|1TKK|F Chain F, The Structure Of A Substrate-Liganded Complex Of The
L-Ala- DL-Glu Epimerase From Bacillus Subtilis
pdb|1TKK|G Chain G, The Structure Of A Substrate-Liganded Complex Of The
L-Ala- DL-Glu Epimerase From Bacillus Subtilis
pdb|1TKK|H Chain H, The Structure Of A Substrate-Liganded Complex Of The
L-Ala- DL-Glu Epimerase From Bacillus Subtilis
Length = 366
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/337 (34%), Positives = 172/337 (51%), Gaps = 17/337 (5%)
Query: 90 VENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFA-- 147
V E+V +R+ +G VGWGE ++TGD ++ + A + + + A
Sbjct: 26 VYTAESVIVRITYDSGAVGWGEAPPTLVITGD---SMDSIESAIHHVLKPALLGKSLAGY 82
Query: 148 ---LDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVS 204
L +I +L G+ S +A VEMAL D A +PL+++ GG ++L T T+ S
Sbjct: 83 EAILHDIQHLLTGN--MSAKAAVEMALYDGWAQMCGLPLYQMLGGYRDTLETDYTVSVNS 140
Query: 205 PAEASELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHA-VHPHCSFILDANEGYTSEE 262
P E + A Y K GF TLK+ VG+ +I D +Q I V LDAN+G+ +E
Sbjct: 141 PEEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRVGSAVKLRLDANQGWRPKE 200
Query: 263 AVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKV 322
AV + K+ D G+ L EQPVH+DD +GL V++ A DT ++ADES + +V
Sbjct: 201 AVTAIRKMEDAGLGIELVEQPVHKDDLAGLKKVTD-ATDT---PIMADESVFTPRQAFEV 256
Query: 323 MQENLASVVNIKLAKFGVLGTLQIIKATRKS-GLHLMIDGMIETRLATGFALHLAAGLGC 381
+Q A ++NIKL K G + + I A ++ G+ M+ MIET+L A H AA
Sbjct: 257 LQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMVGSMIETKLGITAAAHFAASKRN 316
Query: 382 IKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQG 418
I + + P +L D F GG SG+ + G G
Sbjct: 317 ITRFDFDAPLMLKTDVFNGGITYSGSTISMPGKPGLG 353
>pdb|3DFY|A Chain A, Crystal Structure Of Apo Dipeptide Epimerase From
Thermotoga Maritima
pdb|3DFY|B Chain B, Crystal Structure Of Apo Dipeptide Epimerase From
Thermotoga Maritima
pdb|3DFY|C Chain C, Crystal Structure Of Apo Dipeptide Epimerase From
Thermotoga Maritima
pdb|3DFY|D Chain D, Crystal Structure Of Apo Dipeptide Epimerase From
Thermotoga Maritima
pdb|3DFY|E Chain E, Crystal Structure Of Apo Dipeptide Epimerase From
Thermotoga Maritima
pdb|3DFY|F Chain F, Crystal Structure Of Apo Dipeptide Epimerase From
Thermotoga Maritima
pdb|3DFY|G Chain G, Crystal Structure Of Apo Dipeptide Epimerase From
Thermotoga Maritima
pdb|3DFY|H Chain H, Crystal Structure Of Apo Dipeptide Epimerase From
Thermotoga Maritima
pdb|3DFY|I Chain I, Crystal Structure Of Apo Dipeptide Epimerase From
Thermotoga Maritima
pdb|3DFY|J Chain J, Crystal Structure Of Apo Dipeptide Epimerase From
Thermotoga Maritima
pdb|3DFY|K Chain K, Crystal Structure Of Apo Dipeptide Epimerase From
Thermotoga Maritima
pdb|3DFY|L Chain L, Crystal Structure Of Apo Dipeptide Epimerase From
Thermotoga Maritima
pdb|3DFY|M Chain M, Crystal Structure Of Apo Dipeptide Epimerase From
Thermotoga Maritima
pdb|3DFY|N Chain N, Crystal Structure Of Apo Dipeptide Epimerase From
Thermotoga Maritima
pdb|3DFY|O Chain O, Crystal Structure Of Apo Dipeptide Epimerase From
Thermotoga Maritima
pdb|3DFY|P Chain P, Crystal Structure Of Apo Dipeptide Epimerase From
Thermotoga Maritima
pdb|3DEQ|A Chain A, Crystal Structure Of Dipeptide Epimerase From Thermotoga
Maritima Complexed With L-Ala-L-Leu Dipeptide
pdb|3DEQ|B Chain B, Crystal Structure Of Dipeptide Epimerase From Thermotoga
Maritima Complexed With L-Ala-L-Leu Dipeptide
pdb|3DEQ|C Chain C, Crystal Structure Of Dipeptide Epimerase From Thermotoga
Maritima Complexed With L-Ala-L-Leu Dipeptide
pdb|3DEQ|D Chain D, Crystal Structure Of Dipeptide Epimerase From Thermotoga
Maritima Complexed With L-Ala-L-Leu Dipeptide
pdb|3DER|A Chain A, Crystal Structure Of Dipeptide Epimerase From Thermotoga
Maritima Complexed With L-Ala-L-Lys Dipeptide
pdb|3DER|B Chain B, Crystal Structure Of Dipeptide Epimerase From Thermotoga
Maritima Complexed With L-Ala-L-Lys Dipeptide
pdb|3DER|C Chain C, Crystal Structure Of Dipeptide Epimerase From Thermotoga
Maritima Complexed With L-Ala-L-Lys Dipeptide
pdb|3DER|D Chain D, Crystal Structure Of Dipeptide Epimerase From Thermotoga
Maritima Complexed With L-Ala-L-Lys Dipeptide
pdb|3DES|A Chain A, Crystal Structure Of Dipeptide Epimerase From Thermotoga
Maritima Complexed With L-Ala-L-Phe Dipeptide
pdb|3DES|B Chain B, Crystal Structure Of Dipeptide Epimerase From Thermotoga
Maritima Complexed With L-Ala-L-Phe Dipeptide
pdb|3DES|C Chain C, Crystal Structure Of Dipeptide Epimerase From Thermotoga
Maritima Complexed With L-Ala-L-Phe Dipeptide
pdb|3DES|D Chain D, Crystal Structure Of Dipeptide Epimerase From Thermotoga
Maritima Complexed With L-Ala-L-Phe Dipeptide
Length = 345
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 160/307 (52%), Gaps = 8/307 (2%)
Query: 95 NVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFA-LDEIAR 153
NV + + L +G G+GE + V G++ +AL+ + A + + + N+A + EI
Sbjct: 32 NVEVEIVLESGVKGYGEASPSFRVNGERVEALLAIENAVREM-ITGIDVRNYARIFEITD 90
Query: 154 ILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELAS 213
L G F S++A V+ A +DA++ + + L GG + + T T+ + + A
Sbjct: 91 RLFG--FPSLKAAVQFATLDALSQELGTQVCYLLGGKRDEIETDKTVGIDTVENRVKEAK 148
Query: 214 KYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDM 273
K + GF +K+ VG N+ D + ++ I V +I+DAN GYT +EAVE +
Sbjct: 149 KIFEEGFRVIKIKVGENLKEDIEAVEEIAKVTRGAKYIVDANMGYTQKEAVEFARAVYQK 208
Query: 274 GVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNI 333
G+ ++EQPV R+D GL F R V ADES R+ DV ++++E VNI
Sbjct: 209 GIDIAVYEQPVRREDIEGL----KFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNI 264
Query: 334 KLAKFGVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTPFLL 393
KL K G+ L I++ SGL LMI M E+ L ++H A G G ++ +L++ +L
Sbjct: 265 KLMKSGISDALAIVEIAESSGLKLMIGCMGESSLGINQSVHFALGTGAFEFHDLDSHLML 324
Query: 394 SEDPFVG 400
E+ F G
Sbjct: 325 KEEVFRG 331
>pdb|2ZAD|A Chain A, Crystal Structure Of Muconate Cycloisomerase From
Thermotoga Maritima Msb8
pdb|2ZAD|B Chain B, Crystal Structure Of Muconate Cycloisomerase From
Thermotoga Maritima Msb8
pdb|2ZAD|C Chain C, Crystal Structure Of Muconate Cycloisomerase From
Thermotoga Maritima Msb8
pdb|2ZAD|D Chain D, Crystal Structure Of Muconate Cycloisomerase From
Thermotoga Maritima Msb8
Length = 345
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 153/310 (49%), Gaps = 14/310 (4%)
Query: 95 NVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIARI 154
NV + + L +G G+GE + V G++ +AL+ + A + + ARI
Sbjct: 32 NVEVEIVLESGVKGYGEASPSFRVNGERVEALLAIENAVR------EXITGIDVRNYARI 85
Query: 155 LPGSE----FASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASE 210
++ F S++A V+ A +DA++ + + L GG + + T T+ + +
Sbjct: 86 FEITDRLFGFPSLKAAVQFATLDALSQELGTQVCYLLGGKRDEIETDKTVGIDTVENRVK 145
Query: 211 LASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKL 270
A K + GF +K+ VG N+ D + ++ I V +I+DAN GYT +EAVE +
Sbjct: 146 EAKKIFEEGFRVIKIKVGENLKEDIEAVEEIAKVTRGAKYIVDANXGYTQKEAVEFARAV 205
Query: 271 NDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASV 330
G+ ++EQPV R+D GL F R V ADES R+ DV ++++E
Sbjct: 206 YQKGIDIAVYEQPVRREDIEGL----KFVRFHSPFPVAADESARTKFDVXRLVKEEAVDY 261
Query: 331 VNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTP 390
VNIKL K G+ L I++ SGL L I E+ L ++H A G G ++ +L++
Sbjct: 262 VNIKLXKSGISDALAIVEIAESSGLKLXIGCXGESSLGINQSVHFALGTGAFEFHDLDSH 321
Query: 391 FLLSEDPFVG 400
L E+ F G
Sbjct: 322 LXLKEEVFRG 331
>pdb|3JVA|A Chain A, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583
pdb|3JVA|B Chain B, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583
pdb|3JVA|C Chain C, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583
pdb|3JVA|D Chain D, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583
pdb|3JVA|E Chain E, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583
pdb|3JVA|F Chain F, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583
pdb|3JVA|G Chain G, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583
pdb|3JVA|H Chain H, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583
pdb|3JW7|A Chain A, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Ile-L-Tyr
pdb|3JW7|B Chain B, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Ile-L-Tyr
pdb|3JW7|C Chain C, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Ile-L-Tyr
pdb|3JW7|D Chain D, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Ile-L-Tyr
pdb|3JW7|E Chain E, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Ile-L-Tyr
pdb|3JW7|F Chain F, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Ile-L-Tyr
pdb|3JW7|G Chain G, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Ile-L-Tyr
pdb|3JW7|H Chain H, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Ile-L-Tyr
pdb|3JZU|A Chain A, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Leu-L-Tyr
pdb|3JZU|B Chain B, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Leu-L-Tyr
pdb|3JZU|C Chain C, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Leu-L-Tyr
pdb|3JZU|D Chain D, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Leu-L-Tyr
pdb|3JZU|E Chain E, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Leu-L-Tyr
pdb|3JZU|F Chain F, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Leu-L-Tyr
pdb|3JZU|G Chain G, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Leu-L-Tyr
pdb|3JZU|H Chain H, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Leu-L-Tyr
pdb|3K1G|A Chain A, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Ser-L-Tyr
pdb|3K1G|B Chain B, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Ser-L-Tyr
pdb|3K1G|C Chain C, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Ser-L-Tyr
pdb|3K1G|D Chain D, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Ser-L-Tyr
pdb|3K1G|E Chain E, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Ser-L-Tyr
pdb|3K1G|F Chain F, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Ser-L-Tyr
pdb|3K1G|G Chain G, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Ser-L-Tyr
pdb|3K1G|H Chain H, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Ser-L-Tyr
pdb|3KUM|A Chain A, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Arg-L-Tyr
pdb|3KUM|B Chain B, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Arg-L-Tyr
pdb|3KUM|C Chain C, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Arg-L-Tyr
pdb|3KUM|D Chain D, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Arg-L-Tyr
pdb|3KUM|E Chain E, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Arg-L-Tyr
pdb|3KUM|F Chain F, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Arg-L-Tyr
pdb|3KUM|G Chain G, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Arg-L-Tyr
pdb|3KUM|H Chain H, Crystal Structure Of Dipeptide Epimerase From Enterococcus
Faecalis V583 Complexed With Mg And Dipeptide
L-Arg-L-Tyr
Length = 354
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 156/317 (49%), Gaps = 14/317 (4%)
Query: 90 VENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALD 149
+E+ ++ + +E G VG+GE +TG+ L E + Q+ F ++
Sbjct: 26 IESADSAIVEIETEEGLVGYGEGGPGIFITGE---TLAGTLETIELFGQAIIGLNPFNIE 82
Query: 150 EIARILP--GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAE 207
+I ++ + + +A +++A D + +PL++L GG N + T IT+ P
Sbjct: 83 KIHEVMDKISAFAPAAKAAIDIACYDLMGQKAQLPLYQLLGGYDNQVITDITLGIDEPNV 142
Query: 208 ASELASKYCKLGFSTLKLNVGRNITADFDVLQAI-HAVHPHCSFILDANEGYTSEEAVEV 266
++ A + KLGF TLK+ VG I AD ++AI AV LDAN+ +T ++AV+
Sbjct: 143 MAQKAVEKVKLGFDTLKIKVGTGIEADIARVKAIREAVGFDIKLRLDANQAWTPKDAVKA 202
Query: 267 LGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQEN 326
+ L D + L EQPV R D GL V++ T ++ADESC D +++++
Sbjct: 203 IQALADYQI--ELVEQPVKRRDLEGLKYVTSQVNTT----IMADESCFDAQDALELVKKG 256
Query: 327 LASVVNIKLAK-FGVLGTLQIIKATRKSGLHLMIDGMI-ETRLATGFALHLAAGLGCIKY 384
V+NIKL K G+ L+I + +G+ MI M ET + A HLAA I
Sbjct: 257 TVDVINIKLMKCGGIHEALKINQICETAGIECMIGCMAEETTIGITAAAHLAAAQKNITR 316
Query: 385 VNLNTPFLLSEDPFVGG 401
+L+ F L P GG
Sbjct: 317 ADLDATFGLETAPVTGG 333
>pdb|3Q45|A Chain A, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
pdb|3Q45|B Chain B, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
pdb|3Q45|C Chain C, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
pdb|3Q45|D Chain D, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
pdb|3Q45|E Chain E, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
pdb|3Q45|F Chain F, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
pdb|3Q45|G Chain G, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
pdb|3Q45|H Chain H, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
pdb|3Q45|I Chain I, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
pdb|3Q4D|A Chain A, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
pdb|3Q4D|B Chain B, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
pdb|3Q4D|C Chain C, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
pdb|3Q4D|D Chain D, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
pdb|3Q4D|E Chain E, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
pdb|3Q4D|F Chain F, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
pdb|3Q4D|G Chain G, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
pdb|3Q4D|H Chain H, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
pdb|3Q4D|I Chain I, Crystal Structure Of Dipeptide Epimerase From Cytophaga
Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
Length = 368
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 149/315 (47%), Gaps = 14/315 (4%)
Query: 92 NVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEI 151
+ NV +R+ ++G +G+GE + + G+ V Q+L + T +
Sbjct: 28 HANNVIVRIHTASGHIGYGECSPFMTIHGESMDTAFIVG---QYLAKGLIGTSCLDIVSN 84
Query: 152 ARILPGSEFAS--VRAGVEMALIDAVANSIDIPLWRLFGGASNSL-STAITIPAVSPAEA 208
+ ++ + + +++ +AL D A +PL+ GG + + T T+ P +
Sbjct: 85 SLLMDAIIYGNSCIKSAFNIALYDLAAQHAGLPLYAFLGGKKDKIIQTDYTVSIDEPHKM 144
Query: 209 SELASKYCKLGFSTLKLNVGRNITADFDVLQAIH-AVHPHCSFILDANEGYTSEEAVEVL 267
+ A + K GF +K+ VG + D + ++ I A + +DAN+G++ E A+E L
Sbjct: 145 AADAVQIKKNGFEIIKVKVGGSKELDVERIRMIREAAGDSITLRIDANQGWSVETAIETL 204
Query: 268 GKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENL 327
L + E+PV R+ ++ L + R I ++ADESC + D ++++Q
Sbjct: 205 TLLEPYNIQHC--EEPVSRNLYTALPKIRQACR----IPIMADESCCNSFDAERLIQIQA 258
Query: 328 ASVVNIKLAK-FGVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVN 386
N+KL+K G+ L II+ ++ + + + G +E+RL A H+A I Y +
Sbjct: 259 CDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGGFLESRLGFTAAAHVALVSKTICYYD 318
Query: 387 LNTPFLLSEDPFVGG 401
+TP + DP GG
Sbjct: 319 FDTPLMFEADPVRGG 333
>pdb|3R0K|A Chain A, Crystal Structure Of Nysgrc Enolase Target 200555, A
Putative Dipeptide Epimerase From Francisella
Philomiragia : Tartrate Bound, No Mg
pdb|3R0K|B Chain B, Crystal Structure Of Nysgrc Enolase Target 200555, A
Putative Dipeptide Epimerase From Francisella
Philomiragia : Tartrate Bound, No Mg
pdb|3R0U|A Chain A, Crystal Structure Of Nysgrc Enolase Target 200555, A
Putative Dipeptide Epimerase From Francisella
Philomiragia : Tartrate And Mg Complex
pdb|3R0U|B Chain B, Crystal Structure Of Nysgrc Enolase Target 200555, A
Putative Dipeptide Epimerase From Francisella
Philomiragia : Tartrate And Mg Complex
pdb|3R10|A Chain A, Crystal Structure Of Nysgrc Enolase Target 200555, A
Putative Dipeptide Epimerase From Francisella
Philomiragia : Mg Complex
pdb|3R10|B Chain B, Crystal Structure Of Nysgrc Enolase Target 200555, A
Putative Dipeptide Epimerase From Francisella
Philomiragia : Mg Complex
pdb|3R11|A Chain A, Crystal Structure Of Nysgrc Enolase Target 200555, A
Putative Dipeptide Epimerase From Francisella
Philomiragia : Mg And Fumarate Complex
pdb|3R11|B Chain B, Crystal Structure Of Nysgrc Enolase Target 200555, A
Putative Dipeptide Epimerase From Francisella
Philomiragia : Mg And Fumarate Complex
pdb|3R1Z|A Chain A, Crystal Structure Of Nysgrc Enolase Target 200555, A
Putative Dipeptide Epimerase From Francisella
Philomiragia : Complex With L- Ala-L-Glu And L-Ala-D-Glu
pdb|3R1Z|B Chain B, Crystal Structure Of Nysgrc Enolase Target 200555, A
Putative Dipeptide Epimerase From Francisella
Philomiragia : Complex With L- Ala-L-Glu And L-Ala-D-Glu
Length = 379
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 126/272 (46%), Gaps = 21/272 (7%)
Query: 92 NVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQS--PPTTLNFALD 149
+++++A+ + L NG G+G +TGD + Q++ + P L L
Sbjct: 30 HIDSLAVELTLDNGVKGYGVAPATTAITGD-------TLQGXQYIIREIFAPVILGSDLS 82
Query: 150 EIARILPGSEFASV------RAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAV 203
+ + L + F V + +++A D +A DI + +L G +NS+ T ++I
Sbjct: 83 DYKQTLELA-FKKVXFNSAAKXAIDLAYHDLLAKEQDISVAKLLGAKANSIVTDVSISCG 141
Query: 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAI-HAVHPHCSFILDANEGYTSEE 262
+ AE + + F+ +K+ G + D +L+A+ + + F DAN+G+ +
Sbjct: 142 NVAETIQNIQNGVEANFTAIKVKTGADFNRDIQLLKALDNEFSKNIKFRFDANQGWNLAQ 201
Query: 263 AVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKV 322
+ + ++N + + EQPV D +++ F+ I VVADES D ++V
Sbjct: 202 TKQFIEEINKYSLNVEIIEQPVKYYDIKAXAEITKFS----NIPVVADESVFDAKDAERV 257
Query: 323 MQENLASVVNIKLAKFGVLGTLQIIKATRKSG 354
+ E + +NIKLAK G + Q IK S
Sbjct: 258 IDEQACNXINIKLAKTGGILEAQKIKKLADSA 289
>pdb|2P88|A Chain A, Crystal Structure Of N-succinyl Arg/lys Racemase From
Bacillus Cereus Atcc 14579
pdb|2P88|B Chain B, Crystal Structure Of N-succinyl Arg/lys Racemase From
Bacillus Cereus Atcc 14579
pdb|2P88|C Chain C, Crystal Structure Of N-succinyl Arg/lys Racemase From
Bacillus Cereus Atcc 14579
pdb|2P88|D Chain D, Crystal Structure Of N-succinyl Arg/lys Racemase From
Bacillus Cereus Atcc 14579
pdb|2P88|E Chain E, Crystal Structure Of N-succinyl Arg/lys Racemase From
Bacillus Cereus Atcc 14579
pdb|2P88|F Chain F, Crystal Structure Of N-succinyl Arg/lys Racemase From
Bacillus Cereus Atcc 14579
pdb|2P88|G Chain G, Crystal Structure Of N-succinyl Arg/lys Racemase From
Bacillus Cereus Atcc 14579
pdb|2P88|H Chain H, Crystal Structure Of N-succinyl Arg/lys Racemase From
Bacillus Cereus Atcc 14579
pdb|2P8B|A Chain A, Crystal Structure Of N-Succinyl ArgLYS RACEMASE FROM
Bacillus Cereus Atcc 14579 Complexed With N-Succinyl
Lys.
pdb|2P8C|A Chain A, Crystal Structure Of N-Succinyl ArgLYS RACEMASE FROM
Bacillus Cereus Atcc 14579 Complexed With N-Succinyl Arg
Length = 369
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 148/314 (47%), Gaps = 20/314 (6%)
Query: 92 NVENVAIRVELSNGCVGWGEVAVVPLVTGDQ---TKALVKVREACQFLRQSPPTTLNFAL 148
++ ++ +++E G +G+GE VTG+ T +K + Q+P +
Sbjct: 28 DMPSIIVKMETDEGIIGYGEGVADDHVTGESWESTFHTLKHTLTPALIGQNP-----MNI 82
Query: 149 DEIARILPGSEFA--SVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVS-P 205
++I ++ + + + +A +++A D + ++ P+++L GG + + +++ P
Sbjct: 83 EKIHDMMDNTIYGVPTAKAAIDIACFDIMGKKLNQPVYQLIGGRYHEEFPVTHVLSIADP 142
Query: 206 AEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAV 264
+E A+ + G+ + K+ VG N+ D ++A+ V + +D N+G+ + +
Sbjct: 143 ENMAEEAASMIQKGYQSFKMKVGTNVKEDVKRIEAVRERVGNDIAIRVDVNQGWKN--SA 200
Query: 265 EVLGKLNDMGVIPV-LFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVM 323
L L +G + + EQPV DD + + R + ++ DE +S ++++++
Sbjct: 201 NTLTALRSLGHLNIDWIEQPVIADDIDAMAHI----RSKTDLPLMIDEGLKSSREMRQII 256
Query: 324 QENLASVVNIKLAK-FGVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCI 382
+ A VNIKL K G+ +++ +G+ + M+E+ +A+ H+A I
Sbjct: 257 KLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVGSMVESSVASSAGFHVAFSKKII 316
Query: 383 KYVNLNTPFLLSED 396
V L P ++D
Sbjct: 317 TSVELTGPLKFTKD 330
>pdb|3IJI|A Chain A, Structure Of Dipeptide Epimerase From Bacteroides
Thetaiotaomicron Complexed With L-Ala-D-Glu;
Nonproductive Substrate Binding.
pdb|3IJI|B Chain B, Structure Of Dipeptide Epimerase From Bacteroides
Thetaiotaomicron Complexed With L-Ala-D-Glu;
Nonproductive Substrate Binding.
pdb|3IJL|A Chain A, Structure Of Dipeptide Epimerase From Bacteroides
Thetaiotaomicron Complexed With L-Pro-D-Glu;
Nonproductive Substrate Binding.
pdb|3IJL|B Chain B, Structure Of Dipeptide Epimerase From Bacteroides
Thetaiotaomicron Complexed With L-Pro-D-Glu;
Nonproductive Substrate Binding.
pdb|3IJQ|A Chain A, Structure Of Dipeptide Epimerase From Bacteroides
Thetaiotaomicron Complexed With L-Ala-D-Glu; Productive
Substrate Binding.
pdb|3IJQ|B Chain B, Structure Of Dipeptide Epimerase From Bacteroides
Thetaiotaomicron Complexed With L-Ala-D-Glu; Productive
Substrate Binding
Length = 338
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 155/317 (48%), Gaps = 22/317 (6%)
Query: 95 NVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIARI 154
+V + +E G G+GE ++ P + G+ ++++ + + S P L L + +
Sbjct: 28 DVQVEIEY-EGVTGYGEASMPPYL-GETVESVMNFLKKVNLEQFSDPFQLEDILSYVDSL 85
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFG-GASNSLSTAITIPAVSPAEASELAS 213
P A +A V++AL D V + P ++++G + ST TI +P + +
Sbjct: 86 SPKDTAA--KAAVDIALHDLVGKLLGAPWYKIWGLNKEKTPSTTFTIGIDTP-DVVRAKT 142
Query: 214 KYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEE-AVEVLGKLND 272
K C F+ LK+ +GR+ D ++++ I +V +DAN+G+ + A++++ L +
Sbjct: 143 KECAGLFNILKVKLGRD--NDKEMIETIRSVT-DLPIAVDANQGWKDRQYALDMIHWLKE 199
Query: 273 MGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVN 332
G+ V+ EQP+ ++ L D++ + + + V ADES + L DV + + + +N
Sbjct: 200 KGI--VMIEQPMPKEQ---LDDIAWVTQQS-PLPVFADESLQRLGDVAAL--KGAFTGIN 251
Query: 333 IKLAK-FGVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTPF 391
IKL K G+ +++ G+ +M+ M ET A A + + + +L+
Sbjct: 252 IKLMKCTGMREAWKMVTLAHALGMRVMVGCMTETSCAISAASQFSP---AVDFADLDGNL 308
Query: 392 LLSEDPFVGGCEVSGAI 408
L+S D F G V+G I
Sbjct: 309 LISNDRFKGVEVVNGKI 325
>pdb|2ZC8|A Chain A, Crystal Structure Of N-Acylamino Acid Racemase From
Thermus Thermophilus Hb8
pdb|2ZC8|B Chain B, Crystal Structure Of N-Acylamino Acid Racemase From
Thermus Thermophilus Hb8
Length = 369
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 13/223 (5%)
Query: 164 RAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPA--EASELASKYCKLGFS 221
+A +EMA D A ++ PLW++ GG ++ +++ + P+ + + ++ + G+
Sbjct: 100 KAVLEMAFFDLWAKALGRPLWQVLGGVRQAVEVGVSL-GIQPSVEDTLRVVERHLEEGYR 158
Query: 222 TLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFE 281
+KL + D++VL+A+ P + DAN Y+ + L +L+++ + + E
Sbjct: 159 RIKLKI--KPGWDYEVLKAVREAFPEATLTADANSAYSLANLAQ-LKRLDELRLDYI--E 213
Query: 282 QPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVL 341
QP+ DD L D + R+ + DES +K ++ V N+K A+ G
Sbjct: 214 QPLAYDD---LLDHAKLQRE-LSTPICLDESLTGAEKARKAIELGAGRVFNVKPARLGGH 269
Query: 342 G-TLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIK 383
G +L++ +G+ L + GM+E + LHLA G K
Sbjct: 270 GESLRVHALAESAGIPLWMGGMLEAGVGRAHNLHLATLPGFTK 312
>pdb|3EEZ|A Chain A, Crystal Structure Of A Putative Mandelate RacemaseMUCONATE
Lactonizing Enzyme From Silicibacter Pomeroyi
Length = 378
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 26/297 (8%)
Query: 91 ENVENVAIRVELSNGCVGWGE-----VAVVPLVTGDQTKALVKVREACQFLRQSPPTTLN 145
E ++ +++E G GWGE VP G +A ++ F+ P L
Sbjct: 31 ELLDATLVKLETDAGITGWGEGTPWGHTYVP-AHGPGIRAGIET--MAPFVLGLDPRRLL 87
Query: 146 FALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNS-LSTAITIPAVS 204
+ LPG +A ++ ++MA D + +P+ L GG S + A ++ A S
Sbjct: 88 DVERAMDIALPGHLYA--KSPIDMACWDIAGQAAGLPIADLMGGGSRTPRPIASSVGAKS 145
Query: 205 PAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFIL-DANEGYTSEEA 263
E + +Y + G+ + +G ++ D ++ + + +L D N G+T ++A
Sbjct: 146 VEETRAVIDRYRQRGYVAHSVKIGGDVERDIARIRDVEDIREPGEIVLYDVNRGWTRQQA 205
Query: 264 VEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVM 323
+ V+ D+ V +FEQP L D++ R + V DE +L D +V
Sbjct: 206 LRVMRATEDLHV---MFEQP-----GETLDDIAAI-RPLHSAPVSVDECLVTLQDAARVA 256
Query: 324 QENLASVVNIKLAKFGVL---GTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAA 377
++ LA V IKL + G L ++ I T + +M G + LA ALHLAA
Sbjct: 257 RDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFVMATG--GSVLADAEALHLAA 311
>pdb|3RIT|A Chain A, Crystal Structure Of Dipeptide Epimerase From
Methylococcus Capsulatus Complexed With Mg And Dipeptide
L-Arg-D-Lys
pdb|3RIT|B Chain B, Crystal Structure Of Dipeptide Epimerase From
Methylococcus Capsulatus Complexed With Mg And Dipeptide
L-Arg-D-Lys
pdb|3RIT|C Chain C, Crystal Structure Of Dipeptide Epimerase From
Methylococcus Capsulatus Complexed With Mg And Dipeptide
L-Arg-D-Lys
pdb|3RIT|D Chain D, Crystal Structure Of Dipeptide Epimerase From
Methylococcus Capsulatus Complexed With Mg And Dipeptide
L-Arg-D-Lys
pdb|3RIT|E Chain E, Crystal Structure Of Dipeptide Epimerase From
Methylococcus Capsulatus Complexed With Mg And Dipeptide
L-Arg-D-Lys
pdb|3RO6|B Chain B, Crystal Structure Of Dipeptide Epimerase From
Methylococcus Capsulatus Complexed With Mg Ion
pdb|3RO6|A Chain A, Crystal Structure Of Dipeptide Epimerase From
Methylococcus Capsulatus Complexed With Mg Ion
pdb|3RO6|C Chain C, Crystal Structure Of Dipeptide Epimerase From
Methylococcus Capsulatus Complexed With Mg Ion
pdb|3RO6|D Chain D, Crystal Structure Of Dipeptide Epimerase From
Methylococcus Capsulatus Complexed With Mg Ion
pdb|3RO6|E Chain E, Crystal Structure Of Dipeptide Epimerase From
Methylococcus Capsulatus Complexed With Mg Ion
pdb|3RO6|F Chain F, Crystal Structure Of Dipeptide Epimerase From
Methylococcus Capsulatus Complexed With Mg Ion
Length = 356
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 146/342 (42%), Gaps = 29/342 (8%)
Query: 90 VENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALD 149
+E ++N+ + + ++G +G G + VTG+ EAC L + +
Sbjct: 26 IEEIDNLIVEIRTADGLLGLGAASPERHVTGETL-------EACHAALDH--DRLGWLMG 76
Query: 150 EIARILPG--SEFASVRAGV-------EMALIDAVANSIDIPLWRLFGGASNSLSTAITI 200
R LP E A +MAL D VA + +PL + G A +SL T++TI
Sbjct: 77 RDIRTLPRLCRELAERLPAAPAARAALDMALHDLVAQCLGLPLVEILGRAHDSLPTSVTI 136
Query: 201 PAVSPAEAS-ELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFI-LDANEGY 258
+ P E + A ++ LGF LK+ + + DF+ L+ +H + + +D N+ Y
Sbjct: 137 -GIKPVEETLAEAREHLALGFRVLKVKLCGDEEQDFERLRRLHETLAGRAVVRVDPNQSY 195
Query: 259 TSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLND 318
+ + + + ++G+ + P R DW L + R + ADES D
Sbjct: 196 DRDGLLRLDRLVQELGIEFIEQPFPAGRTDW--LRALPKAIRR----RIAADESLLGPAD 249
Query: 319 VQKVMQENLA-SVVNIKLAKFGVLG-TLQIIKATRKSGLHLMIDGMIETRLATGFALHLA 376
+ A + NIKL K G L +I +G+ LM M E+R++ ALH A
Sbjct: 250 AFALAAPPAACGIFNIKLMKCGGLAPARRIATIAETAGIDLMWGCMDESRISIAAALHAA 309
Query: 377 AGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQG 418
+Y++L+ F L+ D GG + T G G
Sbjct: 310 LACPATRYLDLDGSFDLARDVAEGGFILEDGRLRVTERPGLG 351
>pdb|1JPD|X Chain X, L-Ala-DL-Glu Epimerase
Length = 324
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 20/265 (7%)
Query: 134 QFLRQSPPTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFG-GASN 192
Q + P +E+ +ILP + R ++ AL D A L L G
Sbjct: 64 QIMSVVPQLEKGLTREELQKILPA---GAARNALDCALWDLAARRQQQSLADLIGITLPE 120
Query: 193 SLSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFIL 252
++ TA T+ +P + + AS + G LK+ + ++ ++ V AI P + I+
Sbjct: 121 TVITAQTVVIGTPDQMANSASTLWQAGAKLLKVKLDNHLISERMV--AIRTAVPDATLIV 178
Query: 253 DANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADES 312
DANE + +E L D+GV + EQP+ D + L NF + + + ADES
Sbjct: 179 DANESWRAEGLAARCQLLADLGV--AMLEQPLPAQDDAALE---NF---IHPLPICADES 230
Query: 313 CRSLNDVQKVMQENLASVVNIKLAKFGVLG-TLQIIKATRKSGLHLMIDGMIETRLATGF 371
C + ++++ + + +VNIKL K G L L + R G LM+ M+ T A
Sbjct: 231 CHTRSNLKAL--KGRYEMVNIKLDKTGGLTEALALATEARAQGFSLMLGCMLCTSRAISA 288
Query: 372 ALHLAAGLGCIKYVNLNTPFLLSED 396
AL L + + +L+ P L+ D
Sbjct: 289 ALPLVPQ---VSFADLDGPTWLAVD 310
>pdb|1WUF|A Chain A, Crystal Structure Of Protein Gi:16801725, Member Of
Enolase Superfamily From Listeria Innocua Clip11262
pdb|1WUF|B Chain B, Crystal Structure Of Protein Gi:16801725, Member Of
Enolase Superfamily From Listeria Innocua Clip11262
Length = 393
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 22/287 (7%)
Query: 100 VELSN--GCVGWGEVAVVPLVTGDQ---TKALVKVREACQFLRQSPPTTLNFALDEIARI 154
+EL N G G+GE+ PL + + A++ ++E L + E+
Sbjct: 53 IELINEEGIHGYGELEAFPLPDYTEETLSSAILIIKEQLLPLLAQRKIRKPEEIQELFSW 112
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEAS-ELAS 213
+ G+E A +A VE+A+ DA A L ++ G S+ ++I E +L +
Sbjct: 113 IQGNEMA--KAAVELAVWDAFAKMEKRSLAKMIGATKESIKVGVSIGLQQNVETLLQLVN 170
Query: 214 KYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDM 273
+Y G+ +KL + N D ++A+ P S + DAN Y E+ + +L +L+
Sbjct: 171 QYVDQGYERVKLKIAPN--KDIQFVEAVRKSFPKLSLMADANSAYNREDFL-LLKELDQY 227
Query: 274 GVIPVLFEQPVHRDDWSGLHDVSNFA--RDTYGISVVADESCRSLNDVQKVMQENLASVV 331
+ + EQP G D + A + + DE+ RS+ DV++ +
Sbjct: 228 DL--EMIEQPF------GTKDFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAI 279
Query: 332 NIKLAKFGVLGT-LQIIKATRKSGLHLMIDGMIETRLATGFALHLAA 377
N+KLA+ G + + L+I + + + + GM+E + + LAA
Sbjct: 280 NLKLARVGGMSSALKIAEYCALNEILVWCGGMLEAGVGRAHNIALAA 326
>pdb|2GGG|A Chain A, The Mutant A68c-D72c Of Deinococcus Radiodurans
N-Acylamino Acid Racemase
pdb|2GGG|B Chain B, The Mutant A68c-D72c Of Deinococcus Radiodurans
N-Acylamino Acid Racemase
pdb|2GGG|C Chain C, The Mutant A68c-D72c Of Deinococcus Radiodurans
N-Acylamino Acid Racemase
pdb|2GGG|D Chain D, The Mutant A68c-D72c Of Deinococcus Radiodurans
N-Acylamino Acid Racemase
pdb|2GGH|A Chain A, The Mutant A68c-D72c-Nlq Of Deinococcus Radiodurans
Nacylamino Acid Racemase
pdb|2GGH|B Chain B, The Mutant A68c-D72c-Nlq Of Deinococcus Radiodurans
Nacylamino Acid Racemase
pdb|2GGH|C Chain C, The Mutant A68c-D72c-Nlq Of Deinococcus Radiodurans
Nacylamino Acid Racemase
pdb|2GGH|D Chain D, The Mutant A68c-D72c-Nlq Of Deinococcus Radiodurans
Nacylamino Acid Racemase
Length = 375
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 13/216 (6%)
Query: 164 RAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEAS-ELASKYCKLGFST 222
RA VEMA D A ++ +PL L GG + +++ + +A+ +L ++ + G+
Sbjct: 107 RAMVEMAAWDLWARTLGVPLGTLLGGHKEQVEVGVSLGIQADEQATVDLVRRHVEQGYRR 166
Query: 223 LKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF-E 281
+KL + D ++A P +DAN YT +A G+L + + + E
Sbjct: 167 IKLKI--KPGWDVQPVRATREAFPDIRLTVDANSAYTLADA----GRLRQLDEYDLTYIE 220
Query: 282 QPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVL 341
QP+ W L D + AR + DES S +D +K + V+N+K+A+ G
Sbjct: 221 QPLA---WDDLVDHAELARRIR-TPLCLDESVASASDARKALALGAGGVINLKVARVGGH 276
Query: 342 GTLQIIKATRKS-GLHLMIDGMIETRLATGFALHLA 376
+ + +S G + GM+E+ + +HL+
Sbjct: 277 AESRRVHDVAQSFGAPVWCGGMLESGIGRAHNIHLS 312
>pdb|2FKP|A Chain A, The Mutant G127c-T313c Of Deinococcus Radiodurans N-
Acylamino Acid Racemase
pdb|2FKP|B Chain B, The Mutant G127c-T313c Of Deinococcus Radiodurans N-
Acylamino Acid Racemase
pdb|2FKP|C Chain C, The Mutant G127c-T313c Of Deinococcus Radiodurans N-
Acylamino Acid Racemase
pdb|2FKP|D Chain D, The Mutant G127c-T313c Of Deinococcus Radiodurans N-
Acylamino Acid Racemase
Length = 375
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 13/216 (6%)
Query: 164 RAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEAS-ELASKYCKLGFST 222
RA VEMA D A ++ +PL L GG + +++ + +A+ +L ++ + G+
Sbjct: 107 RAMVEMAAWDLWARTLGVPLCTLLGGHKEQVEVGVSLGIQADEQATVDLVRRHVEQGYRR 166
Query: 223 LKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF-E 281
+KL + D ++A P +DAN YT +A G+L + + + E
Sbjct: 167 IKLKI--KPGWDVQPVRATREAFPDIRLTVDANSAYTLADA----GRLRQLDEYDLTYIE 220
Query: 282 QPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVL 341
QP+ W L D + AR + DES S +D +K + V+N+K+A+ G
Sbjct: 221 QPLA---WDDLVDHAELARRIR-TPLCLDESVASASDARKALALGAGGVINLKVARVGGH 276
Query: 342 GTLQIIKATRKS-GLHLMIDGMIETRLATGFALHLA 376
+ + +S G + GM+E+ + +HL+
Sbjct: 277 AESRRVHDVAQSFGAPVWCGGMLESGIGRAHNIHLS 312
>pdb|3I4K|A Chain A, Crystal Structure Of Muconate Lactonizing Enzyme From
Corynebacterium Glutamicum
pdb|3I4K|B Chain B, Crystal Structure Of Muconate Lactonizing Enzyme From
Corynebacterium Glutamicum
pdb|3I4K|C Chain C, Crystal Structure Of Muconate Lactonizing Enzyme From
Corynebacterium Glutamicum
pdb|3I4K|D Chain D, Crystal Structure Of Muconate Lactonizing Enzyme From
Corynebacterium Glutamicum
pdb|3I4K|E Chain E, Crystal Structure Of Muconate Lactonizing Enzyme From
Corynebacterium Glutamicum
pdb|3I4K|F Chain F, Crystal Structure Of Muconate Lactonizing Enzyme From
Corynebacterium Glutamicum
pdb|3I4K|G Chain G, Crystal Structure Of Muconate Lactonizing Enzyme From
Corynebacterium Glutamicum
pdb|3I4K|H Chain H, Crystal Structure Of Muconate Lactonizing Enzyme From
Corynebacterium Glutamicum
Length = 383
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 20/340 (5%)
Query: 67 VQRAEGRELNVXXXXXXXXXXXXVENVENVAIRVELSNGCVGWGEVAVV--PLVTGDQT- 123
+Q+ E R L+V + + V L NG +G+GE V P G+
Sbjct: 8 IQKVESRILDVPLIRPHGFATTTSTEQHILLVSVHLENGVIGYGEGVVPGGPWWGGESVE 67
Query: 124 --KALVKVREACQFLRQSPPTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDI 181
KALV A + ++ D + R++ + +A +A V++A DA A S+++
Sbjct: 68 TXKALVDGYLAPVLIGRAVSELAGIXAD-LERVVARARYA--KAAVDVAXHDAWARSLNV 124
Query: 182 PLWRLFGGASNSLSTAITIPAVSPAEAS--ELASKYCKLGFSTLKLNVGRNITAD--FDV 237
P+ L GG V P + + E+ + + G + KL G A+ V
Sbjct: 125 PVRDLLGGTVRDKVDVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKXGAGDPAEDTRRV 184
Query: 238 LQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSN 297
+ V S +D N + A+ L L + GV LFEQP DD L +++
Sbjct: 185 AELAREVGDRVSLRIDINARWDRRTALHYLPILAEAGV--ELFEQPTPADDLETLREITR 242
Query: 298 FARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKF-GVLGTLQIIKATRKSGLH 356
+SV ADES + + V++ A V+ +K K G+L + +I GL
Sbjct: 243 RTN----VSVXADESVWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLA 298
Query: 357 LMIDGMIETRLATGFALHLAAGLGCIKY-VNLNTPFLLSE 395
+E + T +L AA I Y L P LL +
Sbjct: 299 CHGATSLEGPIGTAASLQFAASTKAISYGTELFGPQLLKD 338
>pdb|1R0M|A Chain A, Structure Of Deinococcus Radiodurans N-Acylamino Acid
Racemase At 1.3 : Insights Into A Flexible Binding
Pocket And Evolution Of Enzymatic Activity
pdb|1R0M|B Chain B, Structure Of Deinococcus Radiodurans N-Acylamino Acid
Racemase At 1.3 : Insights Into A Flexible Binding
Pocket And Evolution Of Enzymatic Activity
pdb|1R0M|C Chain C, Structure Of Deinococcus Radiodurans N-Acylamino Acid
Racemase At 1.3 : Insights Into A Flexible Binding
Pocket And Evolution Of Enzymatic Activity
pdb|1R0M|D Chain D, Structure Of Deinococcus Radiodurans N-Acylamino Acid
Racemase At 1.3 : Insights Into A Flexible Binding
Pocket And Evolution Of Enzymatic Activity
pdb|1XPY|A Chain A, Structural Basis For Catalytic Racemization And Substrate
Specificity Of An N-Acylamino Acid Racemase Homologue
From Deinococcus Radiodurans
pdb|1XPY|B Chain B, Structural Basis For Catalytic Racemization And Substrate
Specificity Of An N-Acylamino Acid Racemase Homologue
From Deinococcus Radiodurans
pdb|1XPY|C Chain C, Structural Basis For Catalytic Racemization And Substrate
Specificity Of An N-Acylamino Acid Racemase Homologue
From Deinococcus Radiodurans
pdb|1XPY|D Chain D, Structural Basis For Catalytic Racemization And Substrate
Specificity Of An N-Acylamino Acid Racemase Homologue
From Deinococcus Radiodurans
pdb|1XS2|A Chain A, Structural Basis For Catalytic Racemization And Substrate
Specificity Of An N-Acylamino Acid Racemase Homologue
From Deinococcus Radiodurans
pdb|1XS2|B Chain B, Structural Basis For Catalytic Racemization And Substrate
Specificity Of An N-Acylamino Acid Racemase Homologue
From Deinococcus Radiodurans
pdb|1XS2|C Chain C, Structural Basis For Catalytic Racemization And Substrate
Specificity Of An N-Acylamino Acid Racemase Homologue
From Deinococcus Radiodurans
pdb|1XS2|D Chain D, Structural Basis For Catalytic Racemization And Substrate
Specificity Of An N-Acylamino Acid Racemase Homologue
From Deinococcus Radiodurans
Length = 375
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 13/216 (6%)
Query: 164 RAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEAS-ELASKYCKLGFST 222
RA VEMA D A ++ +PL L GG + +++ + +A+ +L ++ + G+
Sbjct: 107 RAMVEMAAWDLWARTLGVPLGTLLGGHKEQVEVGVSLGIQADEQATVDLVRRHVEQGYRR 166
Query: 223 LKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF-E 281
+KL + D ++A P +DAN YT +A G+L + + + E
Sbjct: 167 IKLKI--KPGWDVQPVRATREAFPDIRLTVDANSAYTLADA----GRLRQLDEYDLTYIE 220
Query: 282 QPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVL 341
QP+ W L D + AR + DES S +D +K + V+N+K+A+ G
Sbjct: 221 QPLA---WDDLVDHAELARRIR-TPLCLDESVASASDARKALALGAGGVINLKVARVGGH 276
Query: 342 GTLQIIKATRKS-GLHLMIDGMIETRLATGFALHLA 376
+ + +S G + GM+E+ + +HL+
Sbjct: 277 AESRRVHDVAQSFGAPVWCGGMLESGIGRAHNIHLS 312
>pdb|3DG3|A Chain A, Crystal Structure Of Muconate Lactonizing Enzyme From
Mucobacterium Smegmatis
pdb|3DG6|A Chain A, Crystal Structure Of Muconate Lactonizing Enzyme From
Mucobacterium Smegmatis Complexed With Muconolactone
pdb|3DG7|A Chain A, Crystal Structure Of Muconate Lactonizing Enzyme From
Mucobacterium Smegmatis Complexed With Muconolactone
pdb|3DG7|B Chain B, Crystal Structure Of Muconate Lactonizing Enzyme From
Mucobacterium Smegmatis Complexed With Muconolactone
pdb|3DG7|C Chain C, Crystal Structure Of Muconate Lactonizing Enzyme From
Mucobacterium Smegmatis Complexed With Muconolactone
pdb|3DG7|D Chain D, Crystal Structure Of Muconate Lactonizing Enzyme From
Mucobacterium Smegmatis Complexed With Muconolactone
Length = 367
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 132/294 (44%), Gaps = 32/294 (10%)
Query: 90 VENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALD 149
V E+V +RV +G VG E P G+ +V V E Q+ P + L
Sbjct: 26 VHAAEHVLVRVHTDDGIVGVAEAPPRPFTYGETQTGIVAVIE--QYF---APALIGLTLT 80
Query: 150 EIARILPGSEFA------SVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITI--- 200
E R + + A + +A ++MA+ DA+ S+ + + + GG ++ + + +
Sbjct: 81 E--REVAHTRMARTVGNPTAKAAIDMAMWDALGQSLRLSVSEMLGGYTDRMRVSHMLGFD 138
Query: 201 -PAVSPAEASELASKYCKLGFSTLKLNVGRN-ITADFDVLQAIHAVHPHC-SFILDANEG 257
P AEA + Y G +T K+ VGR + D V++A+ +D N G
Sbjct: 139 DPVKMVAEAERIRETY---GINTFKVKVGRRPVQLDTAVVRALRERFGDAIELYVDGNRG 195
Query: 258 YTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFAR--DTYGISVVADESCRS 315
+++ E++ + ++ D+ +LF + + D DV + R + +ADES +
Sbjct: 196 WSAAESLRAMREMADLD---LLFAEELCPAD-----DVLSRRRLVGQLDMPFIADESVPT 247
Query: 316 LNDVQKVMQENLASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMIETRLAT 369
DV + + A+ ++IK A+ G G+ ++ GL +++ I+ ++ T
Sbjct: 248 PADVTREVLGGSATAISIKTARTGFTGSTRVHHLAEGLGLDMVMGNQIDGQIGT 301
>pdb|2GGJ|A Chain A, The Mutant Y218c Of Deinococcus Radiodurans N-Acylamino
Acid Racemase
pdb|2GGJ|B Chain B, The Mutant Y218c Of Deinococcus Radiodurans N-Acylamino
Acid Racemase
pdb|2GGJ|C Chain C, The Mutant Y218c Of Deinococcus Radiodurans N-Acylamino
Acid Racemase
pdb|2GGJ|D Chain D, The Mutant Y218c Of Deinococcus Radiodurans N-Acylamino
Acid Racemase
Length = 375
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 13/216 (6%)
Query: 164 RAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEAS-ELASKYCKLGFST 222
RA VEMA D A ++ +PL L GG + +++ + +A+ +L ++ + G+
Sbjct: 107 RAMVEMAAWDLWARTLGVPLGTLLGGHKEQVEVGVSLGIQADEQATVDLVRRHVEQGYRR 166
Query: 223 LKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVL-FE 281
+KL + D ++A P +DAN YT +A G+L + + E
Sbjct: 167 IKLKI--KPGWDVQPVRATREAFPDIRLTVDANSAYTLADA----GRLRQLDEYDLTCIE 220
Query: 282 QPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVL 341
QP+ W L D + AR + DES S +D +K + V+N+K+A+ G
Sbjct: 221 QPLA---WDDLVDHAELARRIR-TPLCLDESVASASDARKALALGAGGVINLKVARVGGH 276
Query: 342 GTLQIIKATRKS-GLHLMIDGMIETRLATGFALHLA 376
+ + +S G + GM+E+ + +HL+
Sbjct: 277 AESRRVHDVAQSFGAPVWCGGMLESGIGRAHNIHLS 312
>pdb|2GGI|A Chain A, The Mutant E149c-A182c Of Deinococcus Radiodurans N-
Acylamino Acid Racemase
pdb|2GGI|B Chain B, The Mutant E149c-A182c Of Deinococcus Radiodurans N-
Acylamino Acid Racemase
pdb|2GGI|C Chain C, The Mutant E149c-A182c Of Deinococcus Radiodurans N-
Acylamino Acid Racemase
pdb|2GGI|D Chain D, The Mutant E149c-A182c Of Deinococcus Radiodurans N-
Acylamino Acid Racemase
Length = 375
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 13/216 (6%)
Query: 164 RAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEAS-ELASKYCKLGFST 222
RA VEMA D A ++ +PL L GG + +++ + +A+ +L ++ + G+
Sbjct: 107 RAMVEMAAWDLWARTLGVPLGTLLGGHKEQVEVGVSLGIQADCQATVDLVRRHVEQGYRR 166
Query: 223 LKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF-E 281
+KL + D ++ P +DAN YT +A G+L + + + E
Sbjct: 167 IKLKI--KPGWDVQPVRCTREAFPDIRLTVDANSAYTLADA----GRLRQLDEYDLTYIE 220
Query: 282 QPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVL 341
QP+ W L D + AR + DES S +D +K + V+N+K+A+ G
Sbjct: 221 QPLA---WDDLVDHAELARRIR-TPLCLDESVASASDARKALALGAGGVINLKVARVGGH 276
Query: 342 GTLQIIKATRKS-GLHLMIDGMIETRLATGFALHLA 376
+ + +S G + GM+E+ + +HL+
Sbjct: 277 AESRRVHDVAQSFGAPVWCGGMLESGIGRAHNIHLS 312
>pdb|3CT2|A Chain A, Crystal Structure Of Muconate Cycloisomerase From
Pseudomonas Fluorescens
pdb|3CT2|B Chain B, Crystal Structure Of Muconate Cycloisomerase From
Pseudomonas Fluorescens
pdb|3DGB|A Chain A, Crystal Structure Of Muconate Lactonizing Enzyme From
Pseudomonas Fluorescens Complexed With Muconolactone
pdb|3FJ4|A Chain A, Crystal Structure Of Muconate Lactonizing Enzyme From
Pseudomonas Fluorescens Complexed With Muconolactone
pdb|3FJ4|B Chain B, Crystal Structure Of Muconate Lactonizing Enzyme From
Pseudomonas Fluorescens Complexed With Muconolactone
Length = 382
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 143/318 (44%), Gaps = 20/318 (6%)
Query: 90 VENVENVAIRVELSNGCVGWGEVAVVP-LVTGDQTKALVKV---REACQFLRQSPPTTLN 145
++N V IR+ ++G G GE + L G+++ +K R L + +N
Sbjct: 31 MQNQTLVLIRLRCADGIEGLGESTTIGGLAYGNESPDSIKTNIDRFVAPLLIGQDASNIN 90
Query: 146 FALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVS 204
A+ + + + G+ FA ++G+E AL+DA + +P+ L GG ++L A T+ +
Sbjct: 91 AAMLRLEQSIRGNTFA--KSGIESALLDAQGKRLGLPVSELLGGRVRDALPVAWTLASGD 148
Query: 205 PAEASELASKYCKLG-FSTLKLNVGRNITADFDVLQAI---HAVHPHCSFILDANEGYTS 260
A+ A K L KL +G D D+ I A+ S +D N+ +
Sbjct: 149 TAKDIAEAQKMLDLRRHRIFKLKIGAG-EVDRDLAHVIAIKKALGDSASVRVDVNQAWDE 207
Query: 261 EEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQ 320
A+ L G+ L EQP+ R++ +G+ ++ + ++ADES + D
Sbjct: 208 AVALRACRILGGNGI--DLIEQPISRNNRAGMVRLNA----SSPAPIMADESIECVEDAF 261
Query: 321 KVMQENLASVVNIKLAK-FGVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGL 379
+ +E ASV +K+AK G TL+ +G+ L M+E + T + H L
Sbjct: 262 NLAREGAASVFALKIAKNGGPRATLRTAAIAEAAGIGLYGGTMLEGGIGTLASAHAFLTL 321
Query: 380 GCIKY-VNLNTPFLLSED 396
+ + L P LL+ED
Sbjct: 322 NKLSWDTELFGPLLLTED 339
>pdb|3MUC|A Chain A, Muconate Cycloisomerase Variant I54v
pdb|3MUC|B Chain B, Muconate Cycloisomerase Variant I54v
Length = 369
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 139/314 (44%), Gaps = 24/314 (7%)
Query: 96 VAIRVELSNGCVGWGEVAVVP-LVTGDQTKALVKVREACQF---LRQSPPTTLNFALDEI 151
V +RV S+G G GE V L G ++ +K L +N A+ ++
Sbjct: 32 VVLRVRCSDGVEGIGEATTVGGLAYGYESPEGIKANIDAHLAPALIGLAADNINAAMLKL 91
Query: 152 ARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASE 210
++ G+ FA ++G+E AL+DA + +P+ L GG +SL A T+ + A
Sbjct: 92 DKLAKGNTFA--KSGIESALLDAQGKRLGLPVSELLGGRVRDSLEVAWTLASGDTARDIA 149
Query: 211 LASKYCKLG-FSTLKLNVGRN-ITADFD-VLQAIHAVHPHCSFILDANEGYTSEEAVEVL 267
A ++ KL +G N + D V+ + S +D N+ + +A+
Sbjct: 150 EARHMLEIRRHRVFKLKIGANPVEQDLKHVVTIKRELGDSASVRVDVNQYWDESQAIRAC 209
Query: 268 GKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENL 327
L D G+ L EQP+ R + G ++ ++ADES S+ D + +
Sbjct: 210 QVLGDNGI--DLIEQPISRINRGGQVRLNQ----RTPAPIMADESIESVEDAFSLAADGA 263
Query: 328 ASVVNIKLAKFG----VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIK 383
AS+ +K+AK G VL T QI +A +G+ L M+E + T + H L +
Sbjct: 264 ASIFALKIAKNGGPRAVLRTAQIAEA---AGIGLYGGTMLEGSIGTLASAHAFLTLRQLT 320
Query: 384 Y-VNLNTPFLLSED 396
+ L P LL+E+
Sbjct: 321 WGTELFGPLLLTEE 334
>pdb|3FCP|A Chain A, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|B Chain B, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|C Chain C, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|D Chain D, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|E Chain E, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|F Chain F, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|G Chain G, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
pdb|3FCP|H Chain H, Crystal Structure Of Muconate Lactonizing Enzyme From
Klebsiella Pneumoniae
Length = 381
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 33/318 (10%)
Query: 96 VAIRVELSNGCVGWGEVAVVP-LVTGDQTKALVK---VREACQFLRQSPPTTLNFALDEI 151
V +R+ S+G G GE + L G ++ + L+ P LN +
Sbjct: 36 VIVRLTRSDGICGIGEATTIGGLSYGVESPEAISSAITHYLTPLLKGQPADNLNALTARM 95
Query: 152 ARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITI--------PAV 203
+ G+ FA ++ +E AL+DA ++ +P+ L GGA L TA+ + A
Sbjct: 96 NGAIKGNTFA--KSAIETALLDAQGKALGLPVSALLGGA---LQTALPVLWTLASGDTAK 150
Query: 204 SPAEASELASKYCKLGFSTLKLNVG-RNITADFDVLQAI-HAVHPHCSFILDANEGYTSE 261
AE +L ++ F KL +G R + D +AI A+ S +D N+ + +
Sbjct: 151 DIAEGEKLLAEGRHRAF---KLKIGARELATDLRHTRAIVEALGDRASIRVDVNQAWDAA 207
Query: 262 EAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGI--SVVADESCRSLNDV 319
+ +L MGV L EQPV HD + R + I +++ADE+ + D
Sbjct: 208 TGAKGCRELAAMGVD--LIEQPVSA------HDNAALVRLSQQIETAILADEAVATAYDG 259
Query: 320 QKVMQENLASVVNIKLAKFGVLGT-LQIIKATRKSGLHLMIDGMIETRLATGFALHLAAG 378
++ Q+ +K+AK G + L + + + +G+ L M+E + T +LH +
Sbjct: 260 YQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGTMLEGTVGTVASLHAWST 319
Query: 379 LGCIKYVNLNTPFLLSED 396
L + P LL +D
Sbjct: 320 LPLQWGTEMFGPLLLKDD 337
>pdb|1BKH|A Chain A, Muconate Lactonizing Enzyme From Pseudomonas Putida
pdb|1BKH|B Chain B, Muconate Lactonizing Enzyme From Pseudomonas Putida
pdb|1BKH|C Chain C, Muconate Lactonizing Enzyme From Pseudomonas Putida
Length = 369
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 139/314 (44%), Gaps = 24/314 (7%)
Query: 96 VAIRVELSNGCVGWGEVAVVP-LVTGDQTKALVKVREACQF---LRQSPPTTLNFALDEI 151
V +RV S+G G GE + L G ++ +K L +N A+ ++
Sbjct: 32 VVLRVRCSDGVEGIGEATTIGGLAYGYESPEGIKANIDAHLAPALIGLAADNINAAMLKL 91
Query: 152 ARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASE 210
++ G+ FA ++G+E AL+DA + +P+ L GG +SL A T+ + A
Sbjct: 92 DKLAKGNTFA--KSGIESALLDAQGKRLGLPVSELLGGRVRDSLEVAWTLASGDTARDIA 149
Query: 211 LASKYCKLG-FSTLKLNVGRN-ITADFD-VLQAIHAVHPHCSFILDANEGYTSEEAVEVL 267
A ++ KL +G N + D V+ + S +D N+ + +A+
Sbjct: 150 EARHMLEIRRHRVFKLKIGANPVEQDLKHVVTIKRELGDSASVRVDVNQYWDESQAIRAC 209
Query: 268 GKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENL 327
L D G+ L EQP+ R + G ++ ++ADES S+ D + +
Sbjct: 210 QVLGDNGI--DLIEQPISRINRGGQVRLNQ----RTPAPIMADESIESVEDAFSLAADGA 263
Query: 328 ASVVNIKLAKFG----VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIK 383
AS+ +K+AK G VL T QI +A +G+ L M+E + T + H L +
Sbjct: 264 ASIFALKIAKNGGPRAVLRTAQIAEA---AGIGLYGGTMLEGSIGTLASAHAFLTLRQLT 320
Query: 384 Y-VNLNTPFLLSED 396
+ L P LL+E+
Sbjct: 321 WGTELFGPLLLTEE 334
>pdb|1MUC|A Chain A, Structure Of Muconate Lactonizing Enzyme At 1.85 Angstroms
Resolution
pdb|1MUC|B Chain B, Structure Of Muconate Lactonizing Enzyme At 1.85 Angstroms
Resolution
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 139/314 (44%), Gaps = 24/314 (7%)
Query: 96 VAIRVELSNGCVGWGEVAVVP-LVTGDQTKALVKVREACQF---LRQSPPTTLNFALDEI 151
V +RV S+G G GE + L G ++ +K L +N A+ ++
Sbjct: 35 VVLRVRCSDGVEGIGEATTIGGLAYGYESPEGIKANIDAHLAPALIGLAADNINAAMLKL 94
Query: 152 ARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASE 210
++ G+ FA ++G+E AL+DA + +P+ L GG +SL A T+ + A
Sbjct: 95 DKLAKGNTFA--KSGIESALLDAQGKRLGLPVSELLGGRVRDSLEVAWTLASGDTARDIA 152
Query: 211 LASKYCKLG-FSTLKLNVGRN-ITADFD-VLQAIHAVHPHCSFILDANEGYTSEEAVEVL 267
A ++ KL +G N + D V+ + S +D N+ + +A+
Sbjct: 153 EARHMLEIRRHRVFKLKIGANPVEQDLKHVVTIKRELGDSASVRVDVNQYWDESQAIRAC 212
Query: 268 GKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENL 327
L D G+ L EQP+ R + G ++ ++ADES S+ D + +
Sbjct: 213 QVLGDNGI--DLIEQPISRINRGGQVRLNQ----RTPAPIMADESIESVEDAFSLAADGA 266
Query: 328 ASVVNIKLAKFG----VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIK 383
AS+ +K+AK G VL T QI +A +G+ L M+E + T + H L +
Sbjct: 267 ASIFALKIAKNGGPRAVLRTAQIAEA---AGIGLYGGTMLEGSIGTLASAHAFLTLRQLT 323
Query: 384 Y-VNLNTPFLLSED 396
+ L P LL+E+
Sbjct: 324 WGTELFGPLLLTEE 337
>pdb|2MUC|A Chain A, Muconate Cycloisomerase Variant F329i
pdb|2MUC|B Chain B, Muconate Cycloisomerase Variant F329i
Length = 373
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 139/314 (44%), Gaps = 24/314 (7%)
Query: 96 VAIRVELSNGCVGWGEVAVVP-LVTGDQTKALVKVREACQF---LRQSPPTTLNFALDEI 151
V +RV S+G G GE + L G ++ +K L +N A+ ++
Sbjct: 35 VVLRVRCSDGVEGIGEATTIGGLAYGYESPEGIKANIDAHLAPALIGLAADNINAAMLKL 94
Query: 152 ARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASE 210
++ G+ FA ++G+E AL+DA + +P+ L GG +SL A T+ + A
Sbjct: 95 DKLAKGNTFA--KSGIESALLDAQGKRLGLPVSELLGGRVRDSLEVAWTLASGDTARDIA 152
Query: 211 LASKYCKLG-FSTLKLNVGRN-ITADFD-VLQAIHAVHPHCSFILDANEGYTSEEAVEVL 267
A ++ KL +G N + D V+ + S +D N+ + +A+
Sbjct: 153 EARHMLEIRRHRVFKLKIGANPVEQDLKHVVTIKRELGDSASVRVDVNQYWDESQAIRAC 212
Query: 268 GKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENL 327
L D G+ L EQP+ R + G ++ ++ADES S+ D + +
Sbjct: 213 QVLGDNGI--DLIEQPISRINRGGQVRLNQ----RTPAPIMADESIESVEDAFSLAADGA 266
Query: 328 ASVVNIKLAKFG----VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIK 383
AS+ +K+AK G VL T QI +A +G+ L M+E + T + H L +
Sbjct: 267 ASIFALKIAKNGGPRAVLRTAQIAEA---AGIGLYGGTMLEGSIGTLASAHAFLTLRQLT 323
Query: 384 Y-VNLNTPFLLSED 396
+ L P LL+E+
Sbjct: 324 WGTELIGPLLLTEE 337
>pdb|1NU5|A Chain A, Crystal Structure Of Pseudomonas Sp. P51 Chloromuconate
Lactonizing Enzyme
Length = 370
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 120/240 (50%), Gaps = 12/240 (5%)
Query: 162 SVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLG- 219
S +A +++AL D A ++++ + L GG S+ A T+ + A + A + +
Sbjct: 99 SAKAAIDIALHDLKARALNLSIADLIGGTMRTSIPIAWTLASGDTARDIDSALEMIETRR 158
Query: 220 FSTLKLNVG-RNITADFDVLQAI-HAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIP 277
+ K+ +G R D + +++I AV S +D N+G+ + A + +L + GV
Sbjct: 159 HNRFKVKLGARTPAQDLEHIRSIVKAVGDRASVRVDVNQGWDEQTASIWIPRLEEAGV-- 216
Query: 278 VLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAK 337
L EQPV R ++ L ++ + G++++ADES SL+ ++ +++ ++KL
Sbjct: 217 ELVEQPVPRANFGALRRLT----EQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCN 272
Query: 338 F-GVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKY-VNLNTPFLLSE 395
G+ TL++ +G+ M+++ + T ALH+ A L + Y L P++L +
Sbjct: 273 MGGIANTLKVAAVAEAAGISSYGGTMLDSTVGTAAALHVYATLPSLPYGCELIGPWVLGD 332
>pdb|3QLD|A Chain A, Structure Of Probable Mandelate Racemase
(Aalaa1draft_2112) From Alicyclobacillus Acidocaldarius
pdb|3QLD|B Chain B, Structure Of Probable Mandelate Racemase
(Aalaa1draft_2112) From Alicyclobacillus Acidocaldarius
Length = 388
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 16/226 (7%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEA-SELASKYCKLGFSTL 223
A +E A+ D A PL L GG + + + T+ + + + GF +
Sbjct: 109 AAIEXAVWDWYAARTGQPLVGLLGGGRDRVEVSATLGXSESLDVLIQSVDAAVEQGFRRV 168
Query: 224 KLNV--GRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFE 281
KL + GR+ A ++A+ +P + DAN Y E+A VL +L+ + E
Sbjct: 169 KLKIAPGRDRAA----IKAVRLRYPDLAIAADANGSYRPEDA-PVLRQLDAYDL--QFIE 221
Query: 282 QPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVL 341
QP+ DDW L + R V DES RS+ +++ + A V+N+K + G
Sbjct: 222 QPLPEDDWFDLAKLQASLR----TPVCLDESVRSVRELKLTARLGAARVLNVKPGRLGGF 277
Query: 342 G-TLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVN 386
G TL+ + ++G + G ET + L +AA L +Y
Sbjct: 278 GATLRALDVAGEAGXAAWVGGXYETGVGRVHGL-IAAALPLXRYAT 322
>pdb|3I6T|A Chain A, Crystal Structure Of Muconate Cycloisomerase From
Jannaschia Sp.
pdb|3I6T|B Chain B, Crystal Structure Of Muconate Cycloisomerase From
Jannaschia Sp.
pdb|3I6T|C Chain C, Crystal Structure Of Muconate Cycloisomerase From
Jannaschia Sp.
pdb|3I6T|D Chain D, Crystal Structure Of Muconate Cycloisomerase From
Jannaschia Sp
Length = 381
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 126/308 (40%), Gaps = 33/308 (10%)
Query: 93 VENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIA 152
VE V +R++ +G VG+GE + + TG + ++LR P L A+ + A
Sbjct: 37 VEVVVLRLQADSGAVGYGEASPWVVFTGSVEATYAALD---RYLR---PLVLGRAVGDHA 90
Query: 153 RILPGSEFA-----SVRAGVEMALIDAVANSIDIPLWRLFGGASNS---LSTAITIPAVS 204
I+ + A +A ++ AL D A +P+W L GG LS +I P
Sbjct: 91 AIMEDARAAVAHCTEAKAALDTALYDLRARIAGVPVWALLGGRCRDRIPLSCSIADPDFD 150
Query: 205 PAEASELASKYCKLGFSTLKLNVG-RNITADFDVLQAIHAVHPHCSFILDANEGYTSEEA 263
A L + +KL G ++ D L+ + A P +D N+G + A
Sbjct: 151 KDLA--LMQRLQDDDVRIIKLKTGFKDHAFDMMRLERLRADFPAFDIRVDYNQGLHHDVA 208
Query: 264 VEVLGKLNDMGVI-PVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKV 322
L ++ D+ P EQPV + L + RD + ++ADES D+ +
Sbjct: 209 ---LARVRDVATFKPTFIEQPVK----AHLRGLMARIRDAVDVPLLADESIFGPEDMAE- 260
Query: 323 MQENLASVVNIKLAKFGVLGTLQII-KATRKSGLHLMIDGMIETRLATGFALHLAAG--- 378
+A V+IK+ K G L Q + + GL M E LA H+ A
Sbjct: 261 -HPEIADGVSIKIMKSGGLTRAQTVARMAAARGLSAYGGDMFEAGLAHLAGAHMIAATPE 319
Query: 379 --LGCIKY 384
LGC Y
Sbjct: 320 ITLGCEFY 327
>pdb|3UGV|A Chain A, Crystal Structure Of An Enolase From Alpha Pretobacterium
Bal199 (Efi Target Efi-501650) With Bound Mg
pdb|3UGV|B Chain B, Crystal Structure Of An Enolase From Alpha Pretobacterium
Bal199 (Efi Target Efi-501650) With Bound Mg
pdb|3UGV|C Chain C, Crystal Structure Of An Enolase From Alpha Pretobacterium
Bal199 (Efi Target Efi-501650) With Bound Mg
pdb|3UGV|D Chain D, Crystal Structure Of An Enolase From Alpha Pretobacterium
Bal199 (Efi Target Efi-501650) With Bound Mg
pdb|3UGV|E Chain E, Crystal Structure Of An Enolase From Alpha Pretobacterium
Bal199 (Efi Target Efi-501650) With Bound Mg
pdb|3UGV|F Chain F, Crystal Structure Of An Enolase From Alpha Pretobacterium
Bal199 (Efi Target Efi-501650) With Bound Mg
pdb|3UGV|G Chain G, Crystal Structure Of An Enolase From Alpha Pretobacterium
Bal199 (Efi Target Efi-501650) With Bound Mg
pdb|3UGV|H Chain H, Crystal Structure Of An Enolase From Alpha Pretobacterium
Bal199 (Efi Target Efi-501650) With Bound Mg
Length = 390
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGG------ASNSLSTAITIPAVSPAEASELASKYCKL 218
+GV+MA+ DA+A + ++PL L GG A NS + PA AEA EL ++
Sbjct: 129 SGVDMAVWDALARAANMPLCTLLGGTPGSVKAYNSNGLWLKSPAEVAAEAVELKAEGQGT 188
Query: 219 GFSTLKLNVGRNITA-DFDVLQAI-HAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276
GF LKL +GR+ A D + +A+ AV + ++D N+G EA+ +++D+G+
Sbjct: 189 GFKGLKLRMGRDDPAVDIETAEAVWDAVGRDTALMVDFNQGLDMAEAMHRTRQIDDLGL- 247
Query: 277 PVLFEQPVHRDDWSGL----HDVSN 297
E+PV D++ G HD+
Sbjct: 248 -EWIEEPVVYDNFDGYAQLRHDLKT 271
>pdb|2CHR|A Chain A, A Re-Evaluation Of The Crystal Structure Of Chloromuconate
Cycloisomerase
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 36/266 (13%)
Query: 147 ALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIP----- 201
AL +AR + G+ AS +A VEMAL+D A ++ + + L GG L +AI I
Sbjct: 86 ALQTMARAVTGN--ASAKAAVEMALLDLKARALGVSIAELLGG---PLRSAIPIAWTLAS 140
Query: 202 ---------AVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAI-HAVHPHCSFI 251
AV E KLGF R+ D ++A+ +++
Sbjct: 141 GDTKRDLDSAVEMIERRRHNRFKVKLGF--------RSPQDDLIHMEALSNSLGSKAYLR 192
Query: 252 LDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADE 311
+D N+ + + A + +L +GV L EQPV R++ L +S+ R ++++ADE
Sbjct: 193 VDVNQAWDEQVASVYIPELEALGV--ELIEQPVGRENTQALRRLSDNNR----VAIMADE 246
Query: 312 SCRSLNDVQKVMQENLASVVNIKLAKF-GVLGTLQIIKATRKSGLHLMIDGMIETRLATG 370
S +L + ++ V ++KL GV T +I SG+ M+++ + T
Sbjct: 247 SLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDSTIGTS 306
Query: 371 FALHLAAGLGCIKY-VNLNTPFLLSE 395
AL L + + + + L PF+L++
Sbjct: 307 VALQLYSTVPSLPFGCELIGPFVLAD 332
>pdb|2QDE|A Chain A, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING FAMILY Protein From Azoarcus Sp. Ebn1
pdb|2QDE|B Chain B, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING FAMILY Protein From Azoarcus Sp. Ebn1
pdb|2QDE|C Chain C, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING FAMILY Protein From Azoarcus Sp. Ebn1
pdb|2QDE|D Chain D, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING FAMILY Protein From Azoarcus Sp. Ebn1
pdb|2QDE|E Chain E, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING FAMILY Protein From Azoarcus Sp. Ebn1
pdb|2QDE|F Chain F, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING FAMILY Protein From Azoarcus Sp. Ebn1
pdb|2QDE|G Chain G, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING FAMILY Protein From Azoarcus Sp. Ebn1
pdb|2QDE|H Chain H, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING FAMILY Protein From Azoarcus Sp. Ebn1
Length = 397
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 9/217 (4%)
Query: 164 RAGVEMALIDAVANSIDIPLWRLFGGAS-NSLSTAITIPAVSPAEASELASKYCKLGFST 222
+A V+ AL D V +P+++L GG + + + + A P +E A + GF
Sbjct: 104 KATVDFALHDLVGKRFGVPVYQLLGGKTIERIPLGLVLGAGEPEAVAEEALAVLREGFHF 163
Query: 223 LKLNVGRNITADFDVLQAI-HAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFE 281
+KL G + AD ++ + AV +D N +T ++A+ + L + + E
Sbjct: 164 VKLKAGGPLKADIAMVAEVRRAVGDDVDLFIDINGAWTYDQALTTIRALEKYNLSKI--E 221
Query: 282 QPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKF-GV 340
QP+ D G+ + R + ADES + L+D+ ++ + A + IK K G+
Sbjct: 222 QPLPAWDLDGMARL----RGKVATPIYADESAQELHDLLAIINKGAADGLMIKTQKAGGL 277
Query: 341 LGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAA 377
L + + R + L ++ M+ + L A HL A
Sbjct: 278 LKAQRWLTLARLANLPVICGCMVGSGLEASPAAHLLA 314
>pdb|1F9C|A Chain A, Crystal Structure Of Mle D178n Variant
pdb|1F9C|B Chain B, Crystal Structure Of Mle D178n Variant
Length = 372
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 136/314 (43%), Gaps = 24/314 (7%)
Query: 96 VAIRVELSNGCVGWGEVAVVP-LVTGDQTKALVKVREACQF---LRQSPPTTLNFALDEI 151
V +RV S+G G GE + L G ++ +K L +N A+ ++
Sbjct: 34 VVLRVRCSDGVEGIGEATTIGGLAYGYESPEGIKANIDAHLAPALIGLAADNINAAMLKL 93
Query: 152 ARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASE 210
+ G+ FA ++G+E AL+DA + +P+ L GG +SL A T+ + A
Sbjct: 94 DALAKGNTFA--KSGIESALLDAQGKRLGLPVSELLGGRVRDSLEVAWTLASGDTARDIA 151
Query: 211 LASKYCKLG-FSTLKLNVGRNITAD--FDVLQAIHAVHPHCSFILDANEGYTSEEAVEVL 267
A ++ KL +G N V+ + S +D N+ + +A+
Sbjct: 152 EARHMLEIRRHRVFKLKIGANPVEQNLKHVVTIKRELGDSASVRVDVNQYWDESQAIRAC 211
Query: 268 GKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENL 327
L D G+ L EQP+ R + G ++ ++ADES S+ D + +
Sbjct: 212 QVLGDNGI--DLIEQPISRINRGGQVRLNQ----RTPAPIMADESIESVEDAFSLAADGA 265
Query: 328 ASVVNIKLAKFG----VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIK 383
AS+ +K+AK G VL T QI +A +G+ L M+E + T + H L +
Sbjct: 266 ASIFALKIAKNGGPRAVLRTAQIAEA---AGIGLYGGTMLEGSIGTLASAHAFLTLRQLT 322
Query: 384 Y-VNLNTPFLLSED 396
+ L P LL+E+
Sbjct: 323 WGTELFGPLLLTEE 336
>pdb|2PGW|A Chain A, Crystal Structure Of A Putative Muconate Cycloisomerase
From Sinorhizobium Meliloti 1021
pdb|2PGW|B Chain B, Crystal Structure Of A Putative Muconate Cycloisomerase
From Sinorhizobium Meliloti 1021
pdb|2PGW|C Chain C, Crystal Structure Of A Putative Muconate Cycloisomerase
From Sinorhizobium Meliloti 1021
pdb|2PGW|D Chain D, Crystal Structure Of A Putative Muconate Cycloisomerase
From Sinorhizobium Meliloti 1021
pdb|2PGW|E Chain E, Crystal Structure Of A Putative Muconate Cycloisomerase
From Sinorhizobium Meliloti 1021
pdb|2PGW|F Chain F, Crystal Structure Of A Putative Muconate Cycloisomerase
From Sinorhizobium Meliloti 1021
pdb|2PGW|G Chain G, Crystal Structure Of A Putative Muconate Cycloisomerase
From Sinorhizobium Meliloti 1021
pdb|2PGW|H Chain H, Crystal Structure Of A Putative Muconate Cycloisomerase
From Sinorhizobium Meliloti 1021
Length = 384
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 99/253 (39%), Gaps = 24/253 (9%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIARILPG 157
I +E +G VG GE V P TG A + R A + SP IARI
Sbjct: 37 IEIEADDGTVGIGECTVAPDQTG---TAAILYRLAKHLVGHSPHDVAPL----IARIFHQ 89
Query: 158 SEFA----------SVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPA 206
+ +G++ A D +P+ +L GGA ++ + +
Sbjct: 90 EYLGHGANIXRAANQIFSGIDXAXWDLQGKLAGLPVHQLLGGAHRKAVGYFYFLQGETAE 149
Query: 207 EASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEV 266
E + A+ G L VGR D ++ A+ LDANEG++ +A+
Sbjct: 150 ELARDAAVGHAQGERVFYLKVGRGEKLDLEITAAVRGEIGDARLRLDANEGWSVHDAINX 209
Query: 267 LGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQEN 326
KL + EQP WS R+ GI +VAD++ +L DV ++ ++
Sbjct: 210 CRKLEKYDI--EFIEQPT--VSWS--IPAXAHVREKVGIPIVADQAAFTLYDVYEICRQR 263
Query: 327 LASVVNIKLAKFG 339
A + I + G
Sbjct: 264 AADXICIGPREIG 276
>pdb|2QDD|A Chain A, Crystal Structure Of A Member Of Enolase Superfamily From
Roseovarius Nubinhibens Ism
pdb|2QDD|B Chain B, Crystal Structure Of A Member Of Enolase Superfamily From
Roseovarius Nubinhibens Ism
pdb|3FVD|B Chain B, Crystal Structure Of A Member Of Enolase Superfamily From
Roseovarius Nubinhibens Ism Complexed With Magnesium
pdb|3FVD|A Chain A, Crystal Structure Of A Member Of Enolase Superfamily From
Roseovarius Nubinhibens Ism Complexed With Magnesium
Length = 378
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 125/300 (41%), Gaps = 32/300 (10%)
Query: 91 ENVENVAIRVELSNGCVGWGE-----VAVVPLVTGDQTKALVKVREACQFLRQSPPTTLN 145
+ +++ +R++ G GWGE + +P G +A + A L P
Sbjct: 31 DRLDSTYLRIDTDEGVTGWGEGCPWGHSYLP-AHGPGLRAGIATL-APHLLGLDP----- 83
Query: 146 FALDEIARI----LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITI 200
+LD + R+ LPG + V++ ++MA D + +PLW+L GG A+ + +I
Sbjct: 84 RSLDHVNRVMDLQLPGHSY--VKSPIDMACWDILGQVAGLPLWQLLGGEAATPVPINSSI 141
Query: 201 PAVSPAEASELASKYCKLGFSTLKLNVGRNITA-DFDVLQAIHAVHPHCSFI-LDANEGY 258
+P + L ++ G+ T +G + A D ++AI A P + D N +
Sbjct: 142 STGTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISAGLPDGHRVTFDVNRAW 201
Query: 259 TSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLND 318
T AVEVL + I EQP L ++ AR ++ DE +D
Sbjct: 202 TPAIAVEVLNSVRARDWI----EQPCQT-----LDQCAHVARRVAN-PIMLDECLHEFSD 251
Query: 319 VQKVMQENLASVVNIKLAKFGVLGTLQIIKATRKS-GLHLMIDGMIETRLATGFALHLAA 377
V IK + G L + I+ S G + I+ + T LA ALHLAA
Sbjct: 252 HLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIEDVGGTALADTAALHLAA 311
>pdb|4GFI|A Chain A, Crystal Structure Of Efi-502318, An Enolase Family Member
From Agrobacterium Tumefaciens With Homology To
Dipeptide Epimerases (Bound Sodium, L-Ala-L-Glu With
Ordered Loop)
pdb|4GFI|B Chain B, Crystal Structure Of Efi-502318, An Enolase Family Member
From Agrobacterium Tumefaciens With Homology To
Dipeptide Epimerases (Bound Sodium, L-Ala-L-Glu With
Ordered Loop)
pdb|4GFI|C Chain C, Crystal Structure Of Efi-502318, An Enolase Family Member
From Agrobacterium Tumefaciens With Homology To
Dipeptide Epimerases (Bound Sodium, L-Ala-L-Glu With
Ordered Loop)
pdb|4GFI|D Chain D, Crystal Structure Of Efi-502318, An Enolase Family Member
From Agrobacterium Tumefaciens With Homology To
Dipeptide Epimerases (Bound Sodium, L-Ala-L-Glu With
Ordered Loop)
Length = 329
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 104/241 (43%), Gaps = 39/241 (16%)
Query: 174 AVANSIDIPLWRL-------------FGGASNSLSTAITIPAVSPAEASELASKYCK-LG 219
A N++D LW L G + L TA TI S A+ +A+K + G
Sbjct: 89 AARNAVDCALWDLEAKMSGKRAAEQVLGQPAQPLVTAYTI---SLADPDTMAAKTAENAG 145
Query: 220 FSTLKLNVGRNITADFDVLQAIHAVH-PHCSFILDANEGYTSEEAVEVLGKLNDMGVIPV 278
LK+ G TAD + P I+DANEG+ + L ++ +
Sbjct: 146 RPLLKIKTG---TADDEARLRAVRAAAPEARIIIDANEGWNDDNIEYYLKLAAELKI--S 200
Query: 279 LFEQPVH--RDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLA 336
L EQP+ +D + AR + + + ADES S D+ + + +NIKL
Sbjct: 201 LIEQPLPAGKD--------AMLARIEHPVLICADESVHSTEDLAGL--RDRYDAINIKLD 250
Query: 337 KFGVLGTLQIIKA-TRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTPFLLSE 395
K G L ++KA + G +M+ M+ T L A+ +A G + +L+ P LL+E
Sbjct: 251 KTGGLTEALVMKAEAERLGFTIMVGCMLGTSLGMAPAVLVAQG---TAFADLDGPLLLAE 307
Query: 396 D 396
D
Sbjct: 308 D 308
>pdb|3I6E|A Chain A, Crystal Structure Of Muconate Lactonizing Enzyme From
Ruegeria Pomeroyi.
pdb|3I6E|B Chain B, Crystal Structure Of Muconate Lactonizing Enzyme From
Ruegeria Pomeroyi.
pdb|3I6E|C Chain C, Crystal Structure Of Muconate Lactonizing Enzyme From
Ruegeria Pomeroyi.
pdb|3I6E|D Chain D, Crystal Structure Of Muconate Lactonizing Enzyme From
Ruegeria Pomeroyi.
pdb|3I6E|E Chain E, Crystal Structure Of Muconate Lactonizing Enzyme From
Ruegeria Pomeroyi.
pdb|3I6E|F Chain F, Crystal Structure Of Muconate Lactonizing Enzyme From
Ruegeria Pomeroyi.
pdb|3I6E|G Chain G, Crystal Structure Of Muconate Lactonizing Enzyme From
Ruegeria Pomeroyi.
pdb|3I6E|H Chain H, Crystal Structure Of Muconate Lactonizing Enzyme From
Ruegeria Pomeroyi
Length = 385
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 124/314 (39%), Gaps = 24/314 (7%)
Query: 94 ENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFA-LDEIA 152
E V +R+ G G+GE + + TG + + + L A +DE A
Sbjct: 38 EIVVLRLVAEGGAEGFGEASPWAVFTGTPEASYAALDRYLRPLVIGRRVGDRVAIMDEAA 97
Query: 153 RILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNS---LSTAITIPAVSPAEAS 209
R + + +A ++ AL+D ++P+W L GG LS +I P A
Sbjct: 98 RAV--AHCTEAKAALDSALLDLAGRISNLPVWALLGGKCRDTIPLSCSIANPDFDADIA- 154
Query: 210 ELASKYCKLGFSTLKLNVG-RNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLG 268
L + G +KL G R+ D L+ I P +D N+G +EAV +
Sbjct: 155 -LMERLRADGVGLIKLKTGFRDHAFDIMRLELIARDFPEFRVRVDYNQGLEIDEAVPRV- 212
Query: 269 KLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLA 328
L+ P EQPV + ++ R + ++ADES D+ + E +
Sbjct: 213 -LDVAQFQPDFIEQPVRAHHF----ELMARLRGLTDVPLLADESVYGPEDMVRAAHEGIC 267
Query: 329 SVVNIKLAKFGVLGTLQII-KATRKSGLHLMIDGMIETRLATGFALHLAAG-----LGCI 382
V+IK+ K G L Q + + GL M E LA H+ A LGC
Sbjct: 268 DGVSIKIMKSGGLTRAQTVARIAAAHGLMAYGGDMFEAGLAHLAGTHMIAATPEITLGCE 327
Query: 383 KYVNLNTPFLLSED 396
Y + L+ED
Sbjct: 328 FY---QASYFLNED 338
>pdb|3MY9|A Chain A, Crystal Structure Of A Muconate Cycloisomerase From
Azorhizobium Caulinodans
Length = 377
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 16/264 (6%)
Query: 92 NVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQ-FLRQSPPTTLNFALDE 150
+V+ V + V ++G VGWGE A + TG A + + + +P + +
Sbjct: 34 SVKRVLLEVTSADGIVGWGEAAPWEVFTGTPEAAFSALDIYLRPLILGAPIKRVRELMAR 93
Query: 151 IARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNS---LSTAITIPAVSPAE 207
+ ++L G +A VEMAL+D + + + + L GG LS +I P
Sbjct: 94 MDKMLVGH--GEAKAAVEMALLDILGKATGLSVADLLGGRVRDRIPLSFSIADPDFD--A 149
Query: 208 ASELASKYCKLGFSTLKLNVGRNITAD-FDVLQAIHA-VHPHCSFILDANEGYTSEEAVE 265
E G + K+ G A+ +L+ + LD N+ T A++
Sbjct: 150 DLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEFGERIDLRLDFNQALTPFGAMK 209
Query: 266 VLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQE 325
+L ++ P EQPV R L ++ FA ++ADESC D+ +V++
Sbjct: 210 ILRDVD--AFRPTFIEQPVPRRH---LDAMAGFAA-ALDTPILADESCFDAVDLMEVVRR 263
Query: 326 NLASVVNIKLAKFGVLGTLQIIKA 349
A +++K+ K G L Q + A
Sbjct: 264 QAADAISVKIMKCGGLMKAQSLMA 287
>pdb|4H1Z|A Chain A, Crystal Structure Of Putative Isomerase From Sinorhizobium
Meliloti, Open Loop Conformation (Target Efi-502104)
pdb|4H1Z|B Chain B, Crystal Structure Of Putative Isomerase From Sinorhizobium
Meliloti, Open Loop Conformation (Target Efi-502104)
pdb|4H1Z|C Chain C, Crystal Structure Of Putative Isomerase From Sinorhizobium
Meliloti, Open Loop Conformation (Target Efi-502104)
pdb|4H1Z|D Chain D, Crystal Structure Of Putative Isomerase From Sinorhizobium
Meliloti, Open Loop Conformation (Target Efi-502104)
pdb|4H1Z|E Chain E, Crystal Structure Of Putative Isomerase From Sinorhizobium
Meliloti, Open Loop Conformation (Target Efi-502104)
pdb|4H1Z|F Chain F, Crystal Structure Of Putative Isomerase From Sinorhizobium
Meliloti, Open Loop Conformation (Target Efi-502104)
pdb|4H1Z|G Chain G, Crystal Structure Of Putative Isomerase From Sinorhizobium
Meliloti, Open Loop Conformation (Target Efi-502104)
pdb|4H1Z|H Chain H, Crystal Structure Of Putative Isomerase From Sinorhizobium
Meliloti, Open Loop Conformation (Target Efi-502104)
Length = 412
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 113/262 (43%), Gaps = 19/262 (7%)
Query: 94 ENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSP--PTTLNFALDEI 151
+V +R+E NG VGWGE LV T ++ A + + P ++ L ++
Sbjct: 74 RSVLVRIETENGAVGWGE--TYGLVAPRATMEIIDDLLADFTIGRDPFDAAAIHDDLYDL 131
Query: 152 ARI--LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAIT--IPAVSPAE 207
R+ G + A +++AL D +P+ +L GG A +P + A+
Sbjct: 132 MRVRGYTGGFYVDALAAIDIALWDLAGKLAGLPVCKLLGGQRRDRIAAYISGLPEDTRAK 191
Query: 208 ASELASKYCKLGFSTLKLN---VGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAV 264
+ELA+ + GFS+ K + + ++L+ + P D + +T+ EAV
Sbjct: 192 RAELAAAWQAKGFSSFKFASPVADDGVAKEMEILR--ERLGPAVRIACDMHWAHTASEAV 249
Query: 265 EVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQ 324
++ + G+ E PV +D GL V+ + ++ E R+++D+ +
Sbjct: 250 ALIKAMEPHGLW--FAEAPVRTEDIDGLARVAA----SVSTAIAVGEEWRTVHDMVPRVA 303
Query: 325 ENLASVVNIKLAKFGVLGTLQI 346
++V ++ G+ ++I
Sbjct: 304 RRALAIVQPEMGHKGITQFMRI 325
>pdb|4H2H|A Chain A, Crystal Structure Of An Enolase (Mandalate Racemase
Subgroup, Target Efi-502101) From Pelagibaca Bermudensis
Htcc2601, With Bound Mg And L-4-Hydroxyproline Betaine
(Betonicine)
pdb|4H2H|B Chain B, Crystal Structure Of An Enolase (Mandalate Racemase
Subgroup, Target Efi-502101) From Pelagibaca Bermudensis
Htcc2601, With Bound Mg And L-4-Hydroxyproline Betaine
(Betonicine)
pdb|4H2H|C Chain C, Crystal Structure Of An Enolase (Mandalate Racemase
Subgroup, Target Efi-502101) From Pelagibaca Bermudensis
Htcc2601, With Bound Mg And L-4-Hydroxyproline Betaine
(Betonicine)
pdb|4H2H|D Chain D, Crystal Structure Of An Enolase (Mandalate Racemase
Subgroup, Target Efi-502101) From Pelagibaca Bermudensis
Htcc2601, With Bound Mg And L-4-Hydroxyproline Betaine
(Betonicine)
pdb|4H2H|E Chain E, Crystal Structure Of An Enolase (Mandalate Racemase
Subgroup, Target Efi-502101) From Pelagibaca Bermudensis
Htcc2601, With Bound Mg And L-4-Hydroxyproline Betaine
(Betonicine)
pdb|4H2H|F Chain F, Crystal Structure Of An Enolase (Mandalate Racemase
Subgroup, Target Efi-502101) From Pelagibaca Bermudensis
Htcc2601, With Bound Mg And L-4-Hydroxyproline Betaine
(Betonicine)
pdb|4H2H|G Chain G, Crystal Structure Of An Enolase (Mandalate Racemase
Subgroup, Target Efi-502101) From Pelagibaca Bermudensis
Htcc2601, With Bound Mg And L-4-Hydroxyproline Betaine
(Betonicine)
pdb|4H2H|H Chain H, Crystal Structure Of An Enolase (Mandalate Racemase
Subgroup, Target Efi-502101) From Pelagibaca Bermudensis
Htcc2601, With Bound Mg And L-4-Hydroxyproline Betaine
(Betonicine)
Length = 376
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 123/271 (45%), Gaps = 27/271 (9%)
Query: 90 VENVENVAIRVELSNGCVGWGEVAVV-PLVTGDQTKALVKVREACQ---FLRQSPPTTLN 145
V ++ +++ +G +GWGE V P + E ++ P L+
Sbjct: 36 VWSLTTTIVKIIAEDGTIGWGETCPVGPTYAEAHAGGALAALEVLASGLAGAEALPLPLH 95
Query: 146 FALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVS 204
+D +L G +A ++ +++A+ D + +P+ L GGA ++S+S+ ++ +
Sbjct: 96 TRMDS---LLCGHNYA--KSALDIAVHDLWGKRLGVPVHELLGGALTDSVSSYYSLGVME 150
Query: 205 PAEASELASKYCKLGFSTLKLNVG-RNITADFDVLQAIHAVHPHCSFIL--DANEGYTSE 261
P EA+ A + + G+S L++ +G R I D + ++ + L D N G+T+
Sbjct: 151 PDEAARQALEKQREGYSRLQVKLGARPIEIDIEAIRKVWEAVRGTGIALAADGNRGWTTR 210
Query: 262 EAVEVLGKLNDMGVIPVLFEQPVHR-DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQ 320
+A+ + D IP + EQP + +D + + + A + DE SLN V
Sbjct: 211 DALRFSRECPD---IPFVMEQPCNSFEDLEAIRPLCHHA-------LYMDEDGTSLNTVI 260
Query: 321 KVMQENLASVVNIKLAKFGVLGTLQIIKATR 351
+L +K+++ +G LQ ++A R
Sbjct: 261 TAAATSLVDGFGMKVSR---IGGLQHMRAFR 288
>pdb|3T8Q|A Chain A, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME Family Protein From Hoeflea
Phototrophica
pdb|3T8Q|B Chain B, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME Family Protein From Hoeflea
Phototrophica
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 109/274 (39%), Gaps = 26/274 (9%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALD---EIARI 154
++V +G GWG+VA P A V R+ + P +++ +D E
Sbjct: 19 VKVTTDSGETGWGQVA--PYYA--DITAQVLHRQVAPYALGKPALDIDYLVDIIPEKEHK 74
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSL---STAITIPAVSPAEASEL 211
PGS G++ AL D P+ L GG ++ +++ EA+ L
Sbjct: 75 FPGSYLRRALGGLDTALWDLRGRLEGKPVCELIGGTPGTVRAYGSSMKRDITPKDEAARL 134
Query: 212 ASKYCKLGFSTLKLNVGRNITADFD--------VLQAIHA-VHPHCSFILDANEGYTSEE 262
+ + GF K +G D ++ I A + + ++DAN Y E+
Sbjct: 135 SRLRDRFGFDAFKFRIGAECGRGQDEWPGRTEEIVPTIRAAMDDSVALLVDANSCYGPEQ 194
Query: 263 AVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKV 322
A+EV L G+ +E+P ++ V+N I V E L + +++
Sbjct: 195 AIEVGKMLEQNGI--SHYEEPCPYWEYEQTQQVTN----ALSIDVTGGEQDCELQNWRRM 248
Query: 323 MQENLASVVNIKLAKF-GVLGTLQIIKATRKSGL 355
++ +V + G+ TL++ + K+GL
Sbjct: 249 IEMKAVDIVQPDICYLGGITRTLRVAEMAHKAGL 282
>pdb|3DDM|A Chain A, Crystal Structure Of Mandelate RacemaseMUCONATE
Lactonizing Enzyme From Bordetella Bronchiseptica Rb50
pdb|3DDM|B Chain B, Crystal Structure Of Mandelate RacemaseMUCONATE
Lactonizing Enzyme From Bordetella Bronchiseptica Rb50
pdb|3DDM|C Chain C, Crystal Structure Of Mandelate RacemaseMUCONATE
Lactonizing Enzyme From Bordetella Bronchiseptica Rb50
pdb|3DDM|D Chain D, Crystal Structure Of Mandelate RacemaseMUCONATE
Lactonizing Enzyme From Bordetella Bronchiseptica Rb50
Length = 392
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 126/334 (37%), Gaps = 69/334 (20%)
Query: 96 VAIRVELSNGCVGWGEV------------------AVVPLVTGD------QTKALVKVRE 131
V + VE S+G VGWGEV + PL+T Q A ++ R
Sbjct: 41 VLVEVEDSDGAVGWGEVWCNFPACGAEHRARLVETVLAPLLTARAFADPAQAFAHLEART 100
Query: 132 ACQFLRQSPPTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGAS 191
A ++ P L A+ AG+++AL D A PLW GG+
Sbjct: 101 AVLAIQTGEPGPLAQAI----------------AGLDIALCDLAARRAGQPLWAWLGGSG 144
Query: 192 NSLSTAITIPAVSPAEASELASKYCKLGFSTLKLNVG----RNITADFDVLQAIHAVHPH 247
+ + + ++P ++ ++ G+ KL VG R++ V + + A P
Sbjct: 145 DRIG--VYASGINPENPEDVVARKAAEGYRAFKLKVGFDDARDVRNALHVRELLGAATP- 201
Query: 248 CSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRD----DWSGLHDVSNFARDTY 303
+ DAN+G+ A ++ +L + E+P+ D +W+ L +
Sbjct: 202 --LMADANQGWDLPRARQMAQRLGPAQLD--WLEEPLRADRPAAEWAELAQAAP------ 251
Query: 304 GISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVL-GTLQIIKATRKSGLHLMIDGM 362
+ + E+ + + + V+ LAK+G G L + +A +GL
Sbjct: 252 -MPLAGGENIAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVARAVVAAGLR-----Y 305
Query: 363 IETRLATGFALHLAAGLGCIKYVNLNTPFLLSED 396
L G L +A L L +P LL D
Sbjct: 306 CPHYLGAGIGLQASAHL-LAAVPGLASPGLLGVD 338
>pdb|2PPG|A Chain A, Crystal Structure Of Putative Isomerase From Sinorhizobium
Meliloti
pdb|2PPG|B Chain B, Crystal Structure Of Putative Isomerase From Sinorhizobium
Meliloti
pdb|2PPG|C Chain C, Crystal Structure Of Putative Isomerase From Sinorhizobium
Meliloti
pdb|2PPG|D Chain D, Crystal Structure Of Putative Isomerase From Sinorhizobium
Meliloti
Length = 399
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 26/249 (10%)
Query: 95 NVAIRVELSNGCVGWGEVA--VVPLVTGDQTKALVKVREACQFLRQSPP---TTLNFALD 149
+V +R+E NG VGWGE V P T + L+ F P ++ L
Sbjct: 54 SVLVRIETENGAVGWGETYGLVAPRATXEIIDDLL-----ADFTIGRDPFDAAAIHDDLY 108
Query: 150 EIARI--LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAIT--IPAVSP 205
++ R+ G + A +++AL D +P+ +L GG A +P +
Sbjct: 109 DLXRVRGYTGGFYVDALAAIDIALWDLAGKLAGLPVCKLLGGQRRDRIAAYISGLPEDTR 168
Query: 206 AEASELASKYCKLGFSTLKLN---VGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEE 262
A+ +ELA+ + GFS+ K + + ++L+ + P D + +T+ E
Sbjct: 169 AKRAELAAAWQAKGFSSFKFASPVADDGVAKEXEILR--ERLGPAVRIACDXHWAHTASE 226
Query: 263 AVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLND-VQK 321
AV ++ G+ E PV +D GL V+ + ++ E R+++D V +
Sbjct: 227 AVALIKAXEPHGLW--FAEAPVRTEDIDGLARVAA----SVSTAIAVGEEWRTVHDXVPR 280
Query: 322 VMQENLASV 330
V + LA V
Sbjct: 281 VARRALAIV 289
>pdb|3BJS|A Chain A, Crystal Structure Of A Member Of Enolase Superfamily From
Polaromonas Sp. Js666
pdb|3BJS|B Chain B, Crystal Structure Of A Member Of Enolase Superfamily From
Polaromonas Sp. Js666
Length = 428
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 110/265 (41%), Gaps = 37/265 (13%)
Query: 94 ENVAIRVELSNGCVGWGEV---------------AVVPLVTGDQTKALVKVREACQFLRQ 138
+ + IRVE S G G+GE + P++ G + V + ++
Sbjct: 70 DAIIIRVETSEGITGYGEAHPGRSPGAITSLIHNTIAPMLIGMKATDCVGAWQRVHRMQL 129
Query: 139 SPPTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAI 198
S + L G+ A +G++MAL D + ++PL+ L GG+ +
Sbjct: 130 S-----SHGL--------GAGAALAISGIDMALWDIRGKAANMPLYELLGGSKRRIPAYA 176
Query: 199 TIPAV--SPAEA-SELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAV-HPHCSFILDA 254
A+ P E+ +E A +Y G+ LKL +G D + ++ + V + DA
Sbjct: 177 GGIALGYQPKESLAEEAQEYIARGYKALKLRIGDAARVDIERVRHVRKVLGDEVDILTDA 236
Query: 255 NEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCR 314
N YT +A VL L ++ E+P +D++ +V A+ T + + A E+
Sbjct: 237 NTAYTMADARRVLPVLAEIQA--GWLEEPFACNDFASYREV---AKITPLVPIAAGENHY 291
Query: 315 SLNDVQKVMQENLASVVNIKLAKFG 339
+ + +++ V L+K G
Sbjct: 292 TRFEFGQMLDAGAVQVWQPDLSKCG 316
>pdb|2PMQ|A Chain A, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Roseovarius Sp. Htcc2601
pdb|2PMQ|B Chain B, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Roseovarius Sp. Htcc2601
Length = 377
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 119/271 (43%), Gaps = 27/271 (9%)
Query: 90 VENVENVAIRVELSNGCVGWGEVAVV-PLVTGDQTKALVKVREACQ---FLRQSPPTTLN 145
V ++ +++ +G +GWGE V P + E ++ P L+
Sbjct: 29 VWSLTTTIVKIIAEDGTIGWGETCPVGPTYAEAHAGGALAALEVLASGLAGAEALPLPLH 88
Query: 146 FALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVS 204
D +L G +A ++ +++A+ D + +P+ L GGA ++S+S+ ++
Sbjct: 89 TRXDS---LLCGHNYA--KSALDIAVHDLWGKRLGVPVHELLGGALTDSVSSYYSLGVXE 143
Query: 205 PAEASELASKYCKLGFSTLKLNVG-RNITADFDVLQAIHAVHPHCSFIL--DANEGYTSE 261
P EA+ A + + G+S L++ +G R I D + ++ + L D N G+T+
Sbjct: 144 PDEAARQALEKQREGYSRLQVKLGARPIEIDIEAIRKVWEAVRGTGIALAADGNRGWTTR 203
Query: 262 EAVEVLGKLNDMGVIPVLFEQPVHR-DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQ 320
+A+ + D IP + EQP + +D + + + A + DE SLN V
Sbjct: 204 DALRFSRECPD---IPFVXEQPCNSFEDLEAIRPLCHHA-------LYXDEDGTSLNTVI 253
Query: 321 KVMQENLASVVNIKLAKFGVLGTLQIIKATR 351
+L K+++ +G LQ +A R
Sbjct: 254 TAAATSLVDGFGXKVSR---IGGLQHXRAFR 281
>pdb|4H83|A Chain A, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME (Efi Target:502127)
pdb|4H83|B Chain B, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME (Efi Target:502127)
pdb|4H83|C Chain C, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME (Efi Target:502127)
pdb|4H83|D Chain D, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME (Efi Target:502127)
pdb|4H83|E Chain E, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME (Efi Target:502127)
pdb|4H83|F Chain F, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME (Efi Target:502127)
Length = 388
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASK---YCKLGFS 221
A V A+ DAV ++ +PLW+L+GG N L I I +A + Y +LG +
Sbjct: 123 AAVNTAIWDAVGKALKMPLWKLWGGYRNELPM-IAIGGYYGEPLGSIADEMHNYQELGLA 181
Query: 222 TLKLNVGRNITADFD---VLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPV 278
+K VG ++A D + A A +DAN+GY AV++ ++ D+ +
Sbjct: 182 GVKFKVG-GLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNI--R 238
Query: 279 LFEQPV 284
FE+PV
Sbjct: 239 WFEEPV 244
>pdb|3OZM|A Chain A, Crystal Structure Of Enolase Superfamily Member From
Bordetella Bronchiseptica Complexed With Mg, M-Xylarate
And L-Lyxarate
pdb|3OZM|B Chain B, Crystal Structure Of Enolase Superfamily Member From
Bordetella Bronchiseptica Complexed With Mg, M-Xylarate
And L-Lyxarate
pdb|3OZM|C Chain C, Crystal Structure Of Enolase Superfamily Member From
Bordetella Bronchiseptica Complexed With Mg, M-Xylarate
And L-Lyxarate
pdb|3OZM|D Chain D, Crystal Structure Of Enolase Superfamily Member From
Bordetella Bronchiseptica Complexed With Mg, M-Xylarate
And L-Lyxarate
pdb|3OZM|E Chain E, Crystal Structure Of Enolase Superfamily Member From
Bordetella Bronchiseptica Complexed With Mg, M-Xylarate
And L-Lyxarate
pdb|3OZM|F Chain F, Crystal Structure Of Enolase Superfamily Member From
Bordetella Bronchiseptica Complexed With Mg, M-Xylarate
And L-Lyxarate
pdb|3OZM|G Chain G, Crystal Structure Of Enolase Superfamily Member From
Bordetella Bronchiseptica Complexed With Mg, M-Xylarate
And L-Lyxarate
pdb|3OZM|H Chain H, Crystal Structure Of Enolase Superfamily Member From
Bordetella Bronchiseptica Complexed With Mg, M-Xylarate
And L-Lyxarate
pdb|3OZY|A Chain A, Crystal Structure Of Enolase Superfamily Member From
Bordetella Bronchiseptica Complexed With Mg And
M-Xylarate
pdb|3OZY|B Chain B, Crystal Structure Of Enolase Superfamily Member From
Bordetella Bronchiseptica Complexed With Mg And
M-Xylarate
Length = 389
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAV----SPAEASELASKYCKLGF 220
+GV++AL D +++ P+++L GG ++ ++ +P +A++ + + + GF
Sbjct: 108 SGVDIALWDLKGRAMNQPIYQLLGGKFHTRGVRAYASSIYWDLTPDQAADELAGWVEQGF 167
Query: 221 STLKLNVGRNITADFDVLQAI-HAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVL 279
+ KL VGR D L+A+ V ++DAN+ +A+ +L L++ G
Sbjct: 168 TAAKLKVGRAPRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGC--YW 225
Query: 280 FEQPVHRDDWSG 291
FE+P+ DD G
Sbjct: 226 FEEPLSIDDIEG 237
>pdb|3H12|A Chain A, Crystal Structure Of Putative Mandelate Racemase From
Bordetella Bronchiseptica Rb50
pdb|3H12|B Chain B, Crystal Structure Of Putative Mandelate Racemase From
Bordetella Bronchiseptica Rb50
Length = 397
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAV----SPAEASELASKYCKLGF 220
+GV++AL D +++ P+++L GG ++ ++ +P +A++ + + + GF
Sbjct: 108 SGVDIALWDLKGRAMNQPIYQLLGGKFHTRGVRAYASSIYWDLTPDQAADELAGWVEQGF 167
Query: 221 STLKLNVGRNITADFDVLQAI-HAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVL 279
+ KL VGR D L+A+ V ++DAN+ +A+ +L L++ G
Sbjct: 168 TAAKLKVGRAPRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGC--YW 225
Query: 280 FEQPVHRDDWSG 291
FE+P+ DD G
Sbjct: 226 FEEPLSIDDIEG 237
>pdb|2RDX|A Chain A, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Roseovarius Nubinhibens Ism
pdb|2RDX|B Chain B, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Roseovarius Nubinhibens Ism
pdb|2RDX|C Chain C, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Roseovarius Nubinhibens Ism
pdb|2RDX|D Chain D, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Roseovarius Nubinhibens Ism
pdb|2RDX|E Chain E, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Roseovarius Nubinhibens Ism
pdb|2RDX|F Chain F, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Roseovarius Nubinhibens Ism
pdb|2RDX|G Chain G, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Roseovarius Nubinhibens Ism
pdb|2RDX|H Chain H, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Roseovarius Nubinhibens Ism
Length = 379
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 89/216 (41%), Gaps = 20/216 (9%)
Query: 135 FLRQSPPTTLNFALDEIAR-------ILPGSEFASVRAGVEMALIDAVANSIDIPLWRLF 187
F R + P L ++AR ++ G +A +A + A D + + P+W L
Sbjct: 70 FARLAAPQLLGQDPRQVARMERLMDHLVQGHGYA--KAPFDAAFWDILGQATGQPVWMLL 127
Query: 188 GGA-SNSLSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQA-IHAVH 245
GG + P S AE +++ G+ ++ VG + +D D ++A + +
Sbjct: 128 GGKLCDGAPMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGADWQSDIDRIRACLPLLE 187
Query: 246 PHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGI 305
P + DAN+G+ + A+ + D+ I EQP ++ R
Sbjct: 188 PGEKAMADANQGWRVDNAIRLARATRDLDYI---LEQPCRS------YEECQQVRRVADQ 238
Query: 306 SVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVL 341
+ DE L+ Q+++ + A + +K++ G L
Sbjct: 239 PMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGL 274
>pdb|3TCS|A Chain A, Crystal Structure Of A Putative Racemase From Roseobacter
Denitrificans
pdb|3TCS|B Chain B, Crystal Structure Of A Putative Racemase From Roseobacter
Denitrificans
Length = 388
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 111/293 (37%), Gaps = 25/293 (8%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQ--SPPTTLNFALDEIARIL 155
+RV +G GWG+V+ D T ++ + A L Q + L + E
Sbjct: 39 VRVTTQDGAQGWGQVSTY---HADITCTVLHRQVAPWMLGQDITDLDDLLDIVTEREHKF 95
Query: 156 PGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGAS---NSLSTAITIPAVSPAEASELA 212
PGS AGV+ A+ D P+ + GG + ++++ EA L
Sbjct: 96 PGSYLRRAMAGVDTAIWDLRGKQQGKPVAEVLGGTPGLIRAYASSMKRDITPRDEAERLK 155
Query: 213 SKYCKLGFSTLKLNVGRNITADFD---------VLQAIHAVHPHCSFILDANEGYTSEEA 263
GF+ K+ G + + D + + ++DAN YT + A
Sbjct: 156 RLRDTQGFTAFKVRAGAEVGRNRDEWPGRTEEIIPTMRRELGDDVDLLIDANSCYTPDRA 215
Query: 264 VEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVM 323
+EV L D G FE+P + + V+ D I V E L Q+++
Sbjct: 216 IEVGHMLQDHGF--CHFEEPCPYWELAQTKQVT----DALDIDVTGGEQDCDLPTWQRMI 269
Query: 324 QENLASVVNIKLAKF-GVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHL 375
+V + G+ TL++++ R +GL + L T F +HL
Sbjct: 270 DMRAVDIVQPDILYLGGICRTLRVVEMARAAGLPV-TPHCANWSLVTLFTMHL 321
>pdb|3MSY|A Chain A, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From A Marine Actinobacterium
pdb|3MSY|B Chain B, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From A Marine Actinobacterium
pdb|3MSY|C Chain C, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From A Marine Actinobacterium
pdb|3MSY|D Chain D, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From A Marine Actinobacterium
pdb|3MSY|E Chain E, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From A Marine Actinobacterium
pdb|3MSY|F Chain F, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From A Marine Actinobacterium
Length = 379
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASK---YCKLGFS 221
A V A+ DAV ++ PLW+L+GG N L I I +A + Y +LG +
Sbjct: 106 AAVNTAIWDAVGKALKXPLWKLWGGYRNELPX-IAIGGYYGEPLGSIADEXHNYQELGLA 164
Query: 222 TLKLNVGRNITADFD---VLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPV 278
+K VG ++A D + A A +DAN+GY AV++ ++ D+ +
Sbjct: 165 GVKFKVG-GLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNI--R 221
Query: 279 LFEQPV 284
FE+PV
Sbjct: 222 WFEEPV 227
>pdb|3NO1|A Chain A, Crystal Structure Of Mandelate Racemase/muconate
Lactonizing Enzyme From A Marine Actinobacterium In
Complex With Magnesium
pdb|3NO1|B Chain B, Crystal Structure Of Mandelate Racemase/muconate
Lactonizing Enzyme From A Marine Actinobacterium In
Complex With Magnesium
pdb|3NO1|C Chain C, Crystal Structure Of Mandelate Racemase/muconate
Lactonizing Enzyme From A Marine Actinobacterium In
Complex With Magnesium
pdb|3NO1|D Chain D, Crystal Structure Of Mandelate Racemase/muconate
Lactonizing Enzyme From A Marine Actinobacterium In
Complex With Magnesium
pdb|3NO1|E Chain E, Crystal Structure Of Mandelate Racemase/muconate
Lactonizing Enzyme From A Marine Actinobacterium In
Complex With Magnesium
pdb|3NO1|F Chain F, Crystal Structure Of Mandelate Racemase/muconate
Lactonizing Enzyme From A Marine Actinobacterium In
Complex With Magnesium
Length = 398
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASK---YCKLGFS 221
A V A+ DAV ++ PLW+L+GG N L I I +A + Y +LG +
Sbjct: 125 AAVNTAIWDAVGKALKXPLWKLWGGYRNELPX-IAIGGYYGEPLGSIADEXHNYQELGLA 183
Query: 222 TLKLNVGRNITADFD---VLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPV 278
+K VG ++A D + A A +DAN+GY AV++ ++ D+ +
Sbjct: 184 GVKFKVG-GLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNI--R 240
Query: 279 LFEQPV 284
FE+PV
Sbjct: 241 WFEEPV 246
>pdb|4GGB|A Chain A, Crystal Structure Of A Proposed Galactarolactone
Cycloisomerase From Agrobacterium Tumefaciens, Target
Efi-500704, With Bound Ca, Disordered Loops
pdb|4HPN|A Chain A, Crystal Structure Of A Proposed Galactarolactone
Cycloisomerase From Agrobacterium Tumefaciens, Target
Efi-500704, With Bound Ca, Ordered Loops
Length = 378
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 37/210 (17%)
Query: 95 NVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIARI 154
+V + +E +G VGWGE L A+V+ + Q P T ++I +
Sbjct: 31 HVLVEIECDDGTVGWGEC----LGPARPNAAVVQAYSGW-LIGQDPRQT-----EKIWAV 80
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFG---GASNSL------STAITIPAVSP 205
L + ++R + L + IDI LW + G GAS S+ ++ A
Sbjct: 81 L----YNALRDQGQRGLSLTALSGIDIALWDIKGKHYGASISMLLGGRWRESVRAYATGS 136
Query: 206 AE----------ASELASKYCKLGFSTLKLNVGRNITADFDVLQAIH-AVHPHCSFILDA 254
+ ASE+A + + GF K+ +G + D V+ A+ A+ P ++DA
Sbjct: 137 FKRDNVDRVSDNASEMAERRAE-GFHACKIKIGFGVEEDLRVIAAVREAIGPDMRLMIDA 195
Query: 255 NEGYTSEEAVEVLGKLNDMGVIPVLFEQPV 284
N GYT EA+ + + G+ FE+PV
Sbjct: 196 NHGYTVTEAITLGDRAAGFGID--WFEEPV 223
>pdb|2NQL|A Chain A, Crystal Structure Of A Member Of The Enolase Superfamily
From Agrobacterium Tumefaciens
pdb|2NQL|B Chain B, Crystal Structure Of A Member Of The Enolase Superfamily
From Agrobacterium Tumefaciens
Length = 388
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 120/303 (39%), Gaps = 28/303 (9%)
Query: 94 ENVAIRVELSNGCVGWGEV-------AVVPLVTGDQTKALVKVREACQFLRQSPPTTLNF 146
+V +R+ G VGWGE AV L+ D V R+A S P+ +
Sbjct: 51 RSVLVRMTTEAGTVGWGETYGIVAPGAVAALIN-DLLAGFVIGRDA------SDPSAVYD 103
Query: 147 ALDEIARI--LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAIT-IPAV 203
L ++ R+ G + A +++AL D + L GG +S ++ +P
Sbjct: 104 DLYDMMRVRGYTGGFYVDALAALDIALWDIAGQEAGKSIRDLLGGGVDSFPAYVSGLPER 163
Query: 204 SPAEASELASKYCKLGFSTLKLNV---GRNITADFDVLQAIHAVHPHCSFILDANEGYTS 260
+ ELA + GF+ K A+ L+ + + P D + T
Sbjct: 164 TLKARGELAKYWQDRGFNAFKFATPVADDGPAAEIANLRQV--LGPQAKIAADMHWNQTP 221
Query: 261 EEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQ 320
E A+E++ ++ P E PV +D +GL VS + + E R+ D++
Sbjct: 222 ERALELIAEMQPFD--PWFAEAPVWTEDIAGLEKVSK----NTDVPIAVGEEWRTHWDMR 275
Query: 321 KVMQENLASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLG 380
++ ++V ++ G+ ++I + G+ ++ + + +L ++ L
Sbjct: 276 ARIERCRIAIVQPEMGHKGITNFIRIGALAAEHGIDVIPHATVGAGIFLAASLQASSTLS 335
Query: 381 CIK 383
+K
Sbjct: 336 MLK 338
>pdb|4DN1|A Chain A, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup Member) From Agrobacterium Tumefaciens (Target
Efi-502088) With Bound Mg And Formate
pdb|4DN1|B Chain B, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup Member) From Agrobacterium Tumefaciens (Target
Efi-502088) With Bound Mg And Formate
Length = 408
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 120/303 (39%), Gaps = 28/303 (9%)
Query: 94 ENVAIRVELSNGCVGWGEV-------AVVPLVTGDQTKALVKVREACQFLRQSPPTTLNF 146
+V +R+ G VGWGE AV L+ D V R+A S P+ +
Sbjct: 71 RSVLVRMTTEAGTVGWGETYGIVAPGAVAALIN-DLLAGFVIGRDA------SDPSAVYD 123
Query: 147 ALDEIARI--LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAIT-IPAV 203
L ++ R+ G + A +++AL D + L GG +S ++ +P
Sbjct: 124 DLYDMMRVRGYTGGFYVDALAALDIALWDIAGQEAGKSIRDLLGGGVDSFPAYVSGLPER 183
Query: 204 SPAEASELASKYCKLGFSTLKLNV---GRNITADFDVLQAIHAVHPHCSFILDANEGYTS 260
+ ELA + GF+ K A+ L+ + + P D + T
Sbjct: 184 TLKARGELAKYWQDRGFNAFKFATPVADDGPAAEIANLRQV--LGPQAKIAADMHWNQTP 241
Query: 261 EEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQ 320
E A+E++ ++ P E PV +D +GL VS + + E R+ D++
Sbjct: 242 ERALELIAEMQPFD--PWFAEAPVWTEDIAGLEKVSK----NTDVPIAVGEEWRTHWDMR 295
Query: 321 KVMQENLASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLG 380
++ ++V ++ G+ ++I + G+ ++ + + +L ++ L
Sbjct: 296 ARIERCRIAIVQPEMGHKGITNFIRIGALAAEHGIDVIPHATVGAGIFLAASLQASSTLS 355
Query: 381 CIK 383
+K
Sbjct: 356 MLK 358
>pdb|4A35|A Chain A, Crystal Structure Of Human Mitochondrial Enolase
Superfamily Member 1 (Enosf1)
Length = 441
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 4/132 (3%)
Query: 209 SELASKYCKLGFSTLKLNVGRNITADFDVLQAIH-AVHPHCSFILDANEGYTSEEAVEVL 267
+L ++ K G++ K+ VG ++ D Q I + P + ++DAN+ + EAVE +
Sbjct: 206 KQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAVEWM 265
Query: 268 GKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENL 327
KL P+ E+P DD G H + A GI + E C + ++++Q
Sbjct: 266 SKLAKFK--PLWIEEPTSPDDILG-HATISKALVPLGIGIATGEQCHNRVIFKQLLQAKA 322
Query: 328 ASVVNIKLAKFG 339
+ I + G
Sbjct: 323 LQFLQIDSCRLG 334
>pdb|3OP2|A Chain A, Crystal Structure Of Putative Mandelate Racemase From
Bordetella Bronchiseptica Rb50 Complexed With
2-OxoglutaratePHOSPHATE
pdb|3OP2|B Chain B, Crystal Structure Of Putative Mandelate Racemase From
Bordetella Bronchiseptica Rb50 Complexed With
2-OxoglutaratePHOSPHATE
Length = 397
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAV----SPAEASELASKYCKLGF 220
+GV++AL D + + P+++L GG ++ ++ +P +A++ + + + GF
Sbjct: 108 SGVDIALWDLKGRAXNQPIYQLLGGKFHTRGVRAYASSIYWDLTPDQAADELAGWVEQGF 167
Query: 221 STLKLNVGRNITADFDVLQAI-HAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVL 279
+ KL VGR D L+A V ++DAN+ +A+ L L++ G
Sbjct: 168 TAAKLKVGRAPRKDAANLRAXRQRVGADVEILVDANQSLGRHDALAXLRILDEAGC--YW 225
Query: 280 FEQPVHRDDWSG 291
FE+P+ DD G
Sbjct: 226 FEEPLSIDDIEG 237
>pdb|2HZG|A Chain A, Crystal Stucture Of Predicted Mandelate Racemase From
Rhodobacter Sphaeroides
pdb|2HZG|B Chain B, Crystal Stucture Of Predicted Mandelate Racemase From
Rhodobacter Sphaeroides
Length = 401
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 115/296 (38%), Gaps = 27/296 (9%)
Query: 103 SNGCVGWGEVAVVPLVTGDQTKALV--KVREACQFLRQSPPTTLNFALDEIARILPGSEF 160
+ G +GWGE PL + A V K C+ + S D+IARI +
Sbjct: 35 AGGHIGWGECEAAPLPS---IAAFVCPKSHGVCRPVSDSVLGQRLDGPDDIARIAALVGY 91
Query: 161 ASVR--------AGVEMALIDAVANSIDIPLWRLFG--GASNSLSTAITIPAVSPAEASE 210
S+ +G+EMAL D + + P W L G + A + +P E E
Sbjct: 92 NSMDLLQAPHMLSGIEMALWDLLGRRLSAPAWALLGYSASHGKRPYASLLFGDTPQETLE 151
Query: 211 LASKYCKLGFSTLKLN---VGRN-ITADFD-VLQAIHAVHPHCSFILDANE--GYTSEEA 263
A + GF+ +K +GR + AD D ++ A + P ++D + G E A
Sbjct: 152 RARAARRDGFAAVKFGWGPIGRGTVAADADQIMAAREGLGPDGDLMVDVGQIFGEDVEAA 211
Query: 264 VEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVM 323
L L+ GV+ E+P D L + A + + E+ + + Q +M
Sbjct: 212 AARLPTLDAAGVL--WLEEPF---DAGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLM 266
Query: 324 QENLASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGL 379
+ I + G LG + + ++ ++ + LA +L AGL
Sbjct: 267 DYGRIGFIQIDCGRIGGLGPAKRVADAAQARGITYVNHTFTSHLALSASLQPFAGL 322
>pdb|3T9P|A Chain A, Crystal Structure Of A Putative Mandelate RacemaseMUCONATE
Lactonizing Enzyme Family Protein From Roseovarius
pdb|3T9P|B Chain B, Crystal Structure Of A Putative Mandelate RacemaseMUCONATE
Lactonizing Enzyme Family Protein From Roseovarius
Length = 388
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 108/284 (38%), Gaps = 46/284 (16%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPP-----TTLNFA--LDE 150
+RV +G GWG+V+ D T + F RQ P L+FA LD
Sbjct: 39 VRVTTDSGAQGWGQVST---YNADITCTI--------FHRQIAPHALGTDALDFADTLDL 87
Query: 151 IAR---ILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITI--PAVSP 205
I PGS G++ AL D P+ L GG+ + + ++P
Sbjct: 88 IYERELKYPGSYLRRAMTGLDTALWDMRGKLEGKPVATLLGGSPGPVRAYASSMRRDITP 147
Query: 206 AEASELASKYCKL----GFSTLKLNVGRNITADFDVLQA-IHAVHPHCSFIL-------- 252
+ +E ++C+L GF+ K VG D D AV P S L
Sbjct: 148 EDEAE---RFCRLRDDKGFTAFKWRVGAEAGRDHDEWPGRTEAVVPTVSRALGDGIEKLV 204
Query: 253 DANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADES 312
D N Y+ A+EV L D G+ FE+P W +D + R + V E
Sbjct: 205 DGNSCYSPARAIEVGKLLQDNGI--GHFEEPCPY--WE--YDQTAAVRAALLLDVAGGEQ 258
Query: 313 CRSLNDVQKVMQENLASVVNIKLAKFGVLG-TLQIIKATRKSGL 355
+ Q ++ +V + G + TLQ+ + ++GL
Sbjct: 259 DCEYSSWQLMLDRGAVDIVQPDVMYMGGMHRTLQVCQMAARAGL 302
>pdb|2OPJ|A Chain A, Crystal Structure Of O-Succinylbenzoate Synthase
pdb|2QVH|A Chain A, Crystal Structure Of O-Succinylbenzoate Synthase Complexed
With O- Succinyl Benzoate (Osb)
pdb|2QVH|B Chain B, Crystal Structure Of O-Succinylbenzoate Synthase Complexed
With O- Succinyl Benzoate (Osb)
Length = 327
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 17/178 (9%)
Query: 192 NSLSTAITIPAVSPAEASELASKYCKLGFSTLKLNV---GRNITADFDVLQAIH-AVHPH 247
+++ T+PAV P EA+ + + G +T K+ V G++ D ++A+ A+ P
Sbjct: 68 DTVPVNATVPAVGPEEAARIVASS---GCTTAKVKVAERGQSEANDVARVEAVRDALGPR 124
Query: 248 CSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISV 307
+D N + + AV + L+ + EQP D L +V R + +
Sbjct: 125 GRVRIDVNGAWDVDTAVRXIRLLDRFEL--EYVEQPCATVD--ELAEV----RRRVSVPI 176
Query: 308 VADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMIET 365
ADES R D +V A VV +K+ G G ++ + GL +++ +ET
Sbjct: 177 AADESIRRAEDPLRVRDAEAADVVVLKVQPLG--GVRAALRLAEECGLPVVVSSAVET 232
>pdb|2OZ8|A Chain A, Crystal Structure Of Putative Mandelate Racemase From
Mesorhizobium Loti
pdb|2OZ8|B Chain B, Crystal Structure Of Putative Mandelate Racemase From
Mesorhizobium Loti
Length = 389
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 167 VEMALIDAVANSIDIPLWRLFGGASN---SLSTAITIPAVSPAEASELASKYCKLGFSTL 223
V++AL D A +PL L G N + ++ + A S L S +G+S
Sbjct: 106 VQVALWDLAAKEAGLPLHVLLGSRRNRVKAYASGLDFHLDDDAFVS-LFSHAASIGYSAF 164
Query: 224 KLNVG-RNITADFDVLQAIHAVHPHCSFIL-DANEGYTSEEAVEVLGKLNDMGVIPVLFE 281
K+ VG R+ D L+ + P S ++ D NE +TS+EA+ L + + G + E
Sbjct: 165 KIKVGHRDFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHDLLWVE 224
Query: 282 QPVHRDDWSGL 292
P+ R D GL
Sbjct: 225 DPILRHDHDGL 235
>pdb|2OVL|A Chain A, Crystal Structure Of A Racemase From Streptomyces
Coelicolor A3(2)
pdb|2OVL|B Chain B, Crystal Structure Of A Racemase From Streptomyces
Coelicolor A3(2)
pdb|2OVL|C Chain C, Crystal Structure Of A Racemase From Streptomyces
Coelicolor A3(2)
pdb|2OVL|D Chain D, Crystal Structure Of A Racemase From Streptomyces
Coelicolor A3(2)
pdb|3CK5|A Chain A, Crystal Structure Of A Racemase From Streptomyces
Coelicolor A3(2) With Bound Magnesium
pdb|3CK5|B Chain B, Crystal Structure Of A Racemase From Streptomyces
Coelicolor A3(2) With Bound Magnesium
pdb|3CK5|C Chain C, Crystal Structure Of A Racemase From Streptomyces
Coelicolor A3(2) With Bound Magnesium
pdb|3CK5|D Chain D, Crystal Structure Of A Racemase From Streptomyces
Coelicolor A3(2) With Bound Magnesium
Length = 371
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 111/272 (40%), Gaps = 28/272 (10%)
Query: 92 NVENVAIRVELSNGCVGWGEV--------AVVPLVTGDQTKALVKVR-EACQFLRQSPPT 142
+ E + +R+E S+G G G AV V D L+ E + + QS
Sbjct: 30 DFELITVRIEDSDGATGLGYTYTVNHGGAAVATXVDKDLRGCLLGADAEQIEKIWQSXWW 89
Query: 143 TLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLST-AITIP 201
L++A R G S + V++AL D PLW+LFGG + A I
Sbjct: 90 RLHYA----GR---GGHATSAISAVDIALWDLKGIRARTPLWKLFGGYDPVVPVYAGGID 142
Query: 202 AVSP-AEASELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFIL--DANEG 257
P A+ A ++ GF +K VGR ++ D D + A+ H SF L DAN
Sbjct: 143 LELPVADLKTQADRFLAGGFRAIKXKVGRPDLKEDVDRVSALRE-HLGDSFPLXVDANXK 201
Query: 258 YTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLN 317
+T + A+ L + E+P DD G + R++ G ++ E+ +L
Sbjct: 202 WTVDGAIRAARALAPFDLH--WIEEPTIPDDLVG---NARIVRES-GHTIAGGENLHTLY 255
Query: 318 DVQKVMQENLASVVNIKLAKFGVLGTLQIIKA 349
D ++ ++ ++ G T + + A
Sbjct: 256 DFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAA 287
>pdb|1WUE|A Chain A, Crystal Structure Of Protein Gi:29375081, Unknown Member
Of Enolase Superfamily From Enterococcus Faecalis V583
pdb|1WUE|B Chain B, Crystal Structure Of Protein Gi:29375081, Unknown Member
Of Enolase Superfamily From Enterococcus Faecalis V583
Length = 386
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 91/217 (41%), Gaps = 13/217 (5%)
Query: 164 RAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAIT--IPAVSPAEASELASKYCKLGFS 221
+A +E A+ D A L FG + I+ I P ++ K G+
Sbjct: 120 KAALETAIWDLYAKRQQKSLTEFFGPTRRKIPVGISLGIQEDLPQLLKQVQLAVEK-GYQ 178
Query: 222 TLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFE 281
+KL + D + + I P+ ++DAN YT + + L +L+ + + E
Sbjct: 179 RVKLKIRPGY--DVEPVALIRQHFPNLPLMVDANSAYTLADLPQ-LQRLDHYQL--AMIE 233
Query: 282 QPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKF-GV 340
QP DD+ D + R+ + DE+ RSL D Q + +N+K+ + G+
Sbjct: 234 QPFAADDFL---DHAQLQREL-KTRICLDENIRSLKDCQVALALGSCRSINLKIPRVGGI 289
Query: 341 LGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAA 377
L+I +++ L + + GM E+ + L A+
Sbjct: 290 HEALKIAAFCQENDLLVWLGGMFESGVGRALNLQFAS 326
>pdb|3RR1|A Chain A, Crystal Structure Of Enolase Prk14017 (Target Efi-500653)
From Ralstonia Pickettii 12j
pdb|3RR1|B Chain B, Crystal Structure Of Enolase Prk14017 (Target Efi-500653)
From Ralstonia Pickettii 12j
pdb|3RRA|A Chain A, Crystal Structure Of Enolase Prk14017 (Target Efi-500653)
From Ralstonia Pickettii 12j With Magnesium Bound
pdb|3RRA|B Chain B, Crystal Structure Of Enolase Prk14017 (Target Efi-500653)
From Ralstonia Pickettii 12j With Magnesium Bound
Length = 405
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
++VE G GWGE P++ G V E +L P+ +N + R
Sbjct: 19 LKVETDEGVTGWGE----PVIEGRARTVEAAVHELSDYLIGQDPSRINDLWQTMYRAGFY 74
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D + +P++ L GG + + T + PA+
Sbjct: 75 RGGPILMSAIAGIDQALWDIKGKVLGVPVYELLGGLVRDKMRTYSWVGGDRPADVIAGMK 134
Query: 214 KYCKLGFSTLKLN 226
GF KLN
Sbjct: 135 ALQAGGFDHFKLN 147
>pdb|4DYE|A Chain A, Crystal Structure Of An Enolase (Putative Sugar Isomerase,
Target Efi- 502095) From Streptomyces Coelicolor, No Mg,
Ordered Loop
Length = 398
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 28/185 (15%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+RV +G GWGE + G A+V+ R A + SP FAL+ R +
Sbjct: 57 VRVRTDSGVEGWGET-----MWGAPVAAIVR-RMAPDLIGTSP-----FALEAFHRKQHM 105
Query: 155 LP---GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGAS------NSLSTAITIPAVSP 205
+P G + A V++A DA+ + + L GGA +L T P +P
Sbjct: 106 VPFFYGYLGYAAIAAVDVACWDAMGKATGQSVTDLLGGAVRDEVPITALITRADAPGATP 165
Query: 206 AEASELASKYC-----KLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTS 260
A+ + +++ + GF +KL + D +L+A+ P + +D N ++
Sbjct: 166 ADLPKAMAEHAVRVVEEGGFDAVKLKGTTDCAGDVAILRAVREALPGVNLRVDPNAAWSV 225
Query: 261 EEAVE 265
++V
Sbjct: 226 PDSVR 230
>pdb|3U4F|A Chain A, Crystal Structure Of A Mandelate Racemase (Muconate
Lactonizing Enzyme Family Protein) From Roseovarius
Nubinhibens
pdb|3U4F|B Chain B, Crystal Structure Of A Mandelate Racemase (Muconate
Lactonizing Enzyme Family Protein) From Roseovarius
Nubinhibens
pdb|3U4F|C Chain C, Crystal Structure Of A Mandelate Racemase (Muconate
Lactonizing Enzyme Family Protein) From Roseovarius
Nubinhibens
pdb|3U4F|D Chain D, Crystal Structure Of A Mandelate Racemase (Muconate
Lactonizing Enzyme Family Protein) From Roseovarius
Nubinhibens
Length = 388
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 77/200 (38%), Gaps = 19/200 (9%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQ--SPPTTLNFALDEIARIL 155
+RV +G GWG+V+ D T ++ + A L Q S L + E
Sbjct: 39 VRVTSEDGARGWGQVSTY---HSDITCEVLHRQVAPWXLGQDCSDLDDLLDLVTEREHKF 95
Query: 156 PGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPA--VSPAEASELAS 213
PGS AGV+ A+ D P+ L GG++ ++ + ++P + +E
Sbjct: 96 PGSYLRRAXAGVDTAIWDLRGKQAGKPVAELLGGSAGTIRAYASSXKRDITPHDEAERXK 155
Query: 214 KYCKL-GFSTLKLNVGRNITADFD---------VLQAIHAVHPHCSFILDANEGYTSEEA 263
+ GF K+ G + D V + ++DAN Y +A
Sbjct: 156 RLRDAHGFDAFKVRAGAEVGRGRDEWPGRTEEIVPTXRREXGDSAALLIDANSCYAPAQA 215
Query: 264 VEVLGKLNDMGVIPVLFEQP 283
+E+ L D G FE+P
Sbjct: 216 IELGKLLQDHGF--SHFEEP 233
>pdb|4IZG|A Chain A, Crystal Structure Of An Enolase (mandelate Racemase
Subgroup) From Paracococus Denitrificans Pd1222 (target
Nysgrc-012907) With Bound Cis-4oh-d-proline Betaine
(product)
pdb|4IZG|B Chain B, Crystal Structure Of An Enolase (mandelate Racemase
Subgroup) From Paracococus Denitrificans Pd1222 (target
Nysgrc-012907) With Bound Cis-4oh-d-proline Betaine
(product)
Length = 391
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 107/262 (40%), Gaps = 25/262 (9%)
Query: 90 VENVENVAIRVELSNGCVGWGEVAVV-----PLVTGDQTKALVKVREACQFLRQSPPTTL 144
V +++ +++ +G GWGE V P AL ++ P L
Sbjct: 49 VWSLQTTLVKIVADSGLAGWGETCPVGPTYAPSHALGARAALAEMAPGLIGANPLQPLVL 108
Query: 145 NFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAV 203
+D +L G +A +A +++A D + + + L GG A+ + +
Sbjct: 109 RRRMDG---LLCGHNYA--KAAIDIAAYDLMGKHYGVRVADLLGGVAAERVPSYYATGIG 163
Query: 204 SPAEASELASKYCKLGFSTLKLNV-GRNITADFDVLQAI--HAVHPHCSFILDANEGYTS 260
P E + +A++ GF L++ + GR + D + ++ + +D N S
Sbjct: 164 QPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWERIRGTGTRLAVDGNRSLPS 223
Query: 261 EEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNF-ARDTYGISVVADESCRSLNDV 319
+A+ + + + IP + EQP + L +++ R +GI + DES L+ V
Sbjct: 224 RDALRLSRECPE---IPFVLEQPCNT-----LEEIAAIRGRVQHGIYL--DESGEDLSTV 273
Query: 320 QKVMQENLASVVNIKLAKFGVL 341
+ + L +KL + G L
Sbjct: 274 IRAAGQGLCDGFGMKLTRIGGL 295
>pdb|3HPF|A Chain A, Crystal Structure Of The Mutant Y90f Of Divergent
Galactarate Dehydratase From Oceanobacillus Iheyensis
Complexed With Mg And Galactarate
pdb|3HPF|B Chain B, Crystal Structure Of The Mutant Y90f Of Divergent
Galactarate Dehydratase From Oceanobacillus Iheyensis
Complexed With Mg And Galactarate
Length = 391
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 104/257 (40%), Gaps = 28/257 (10%)
Query: 94 ENVAIRVELSNGCVGWGEVA---VVPLVT---GDQTKALVKV---REACQFLRQSPPTTL 144
++V +++ G G GE++ +PL + D + L+ + + ++ + T
Sbjct: 22 KHVIVKIHTDEGLTGIGEMSDFSHLPLYSVDLHDLKQGLLSILLGQNPFDLMKINKELTD 81
Query: 145 NFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVS 204
NF E F +R G++ AL D A +DI + GG + P
Sbjct: 82 NFP--ETMYYFEKGSF--IRNGIDNALHDLCAKYLDISVSDFLGGRVKE-KIKVCYPIFR 136
Query: 205 PAEASELAS------KYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFI--LDANE 256
+ E+ S + + GF +L VG+N+ AD + L + I D +
Sbjct: 137 HRFSEEVESNLDVVRQKLEQGFDVFRLYVGKNLDADEEFLSRVKEEFGSRVRIKSYDFSH 196
Query: 257 GYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSL 316
++A + +L + + E P R+D+ GL+ + + Y IS E S
Sbjct: 197 LLNWKDAHRAIKRLTKYDLGLEMIESPAPRNDFDGLYQLR--LKTDYPIS----EHVWSF 250
Query: 317 NDVQKVMQENLASVVNI 333
Q++++++ + NI
Sbjct: 251 KQQQEMIKKDAIDIFNI 267
>pdb|2OQH|A Chain A, Crystal Structure Of An Isomerase From Streptomyces
Coelicolor A3(2)
pdb|2OQH|B Chain B, Crystal Structure Of An Isomerase From Streptomyces
Coelicolor A3(2)
pdb|2OQH|C Chain C, Crystal Structure Of An Isomerase From Streptomyces
Coelicolor A3(2)
pdb|2OQH|D Chain D, Crystal Structure Of An Isomerase From Streptomyces
Coelicolor A3(2)
Length = 385
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 28/185 (15%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---- 153
+RV +G GWGE G A+V+ R A + SP FAL+ R
Sbjct: 36 VRVRTDSGVEGWGETX-----WGAPVAAIVR-RXAPDLIGTSP-----FALEAFHRKQHX 84
Query: 154 --ILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGAS------NSLSTAITIPAVSP 205
G + A V++A DA + + L GGA +L T P +P
Sbjct: 85 VPFFYGYLGYAAIAAVDVACWDAXGKATGQSVTDLLGGAVRDEVPITALITRADAPGATP 144
Query: 206 AEASELASKYC-----KLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTS 260
A+ + +++ + GF +KL + D +L+A+ P + +D N ++
Sbjct: 145 ADLPKAXAEHAVRVVEEGGFDAVKLKGTTDCAGDVAILRAVREALPGVNLRVDPNAAWSV 204
Query: 261 EEAVE 265
++V
Sbjct: 205 PDSVR 209
>pdb|2OQY|A Chain A, The Crystal Structure Of Muconate Cycloisomerase From
Oceanobacillus Iheyensis
pdb|2OQY|B Chain B, The Crystal Structure Of Muconate Cycloisomerase From
Oceanobacillus Iheyensis
pdb|2OQY|C Chain C, The Crystal Structure Of Muconate Cycloisomerase From
Oceanobacillus Iheyensis
pdb|2OQY|D Chain D, The Crystal Structure Of Muconate Cycloisomerase From
Oceanobacillus Iheyensis
pdb|2OQY|E Chain E, The Crystal Structure Of Muconate Cycloisomerase From
Oceanobacillus Iheyensis
pdb|2OQY|F Chain F, The Crystal Structure Of Muconate Cycloisomerase From
Oceanobacillus Iheyensis
pdb|2OQY|G Chain G, The Crystal Structure Of Muconate Cycloisomerase From
Oceanobacillus Iheyensis
pdb|2OQY|H Chain H, The Crystal Structure Of Muconate Cycloisomerase From
Oceanobacillus Iheyensis
pdb|3ES7|A Chain A, Crystal Structure Of Divergent Enolase From Oceanobacillus
Iheyensis Complexed With Mg And L-Malate.
pdb|3ES7|B Chain B, Crystal Structure Of Divergent Enolase From Oceanobacillus
Iheyensis Complexed With Mg And L-Malate.
pdb|3ES8|A Chain A, Crystal Structure Of Divergent Enolase From Oceanobacillus
Iheyensis Complexed With Mg And L-Malate.
pdb|3ES8|B Chain B, Crystal Structure Of Divergent Enolase From Oceanobacillus
Iheyensis Complexed With Mg And L-Malate.
pdb|3ES8|C Chain C, Crystal Structure Of Divergent Enolase From Oceanobacillus
Iheyensis Complexed With Mg And L-Malate.
pdb|3ES8|D Chain D, Crystal Structure Of Divergent Enolase From Oceanobacillus
Iheyensis Complexed With Mg And L-Malate.
pdb|3ES8|E Chain E, Crystal Structure Of Divergent Enolase From Oceanobacillus
Iheyensis Complexed With Mg And L-Malate.
pdb|3ES8|F Chain F, Crystal Structure Of Divergent Enolase From Oceanobacillus
Iheyensis Complexed With Mg And L-Malate.
pdb|3ES8|G Chain G, Crystal Structure Of Divergent Enolase From Oceanobacillus
Iheyensis Complexed With Mg And L-Malate.
pdb|3ES8|H Chain H, Crystal Structure Of Divergent Enolase From Oceanobacillus
Iheyensis Complexed With Mg And L-Malate.
pdb|3FYY|A Chain A, Crystal Structure Of Divergent Enolase From Oceanobacillus
Iheyensis Complexed With Mg
pdb|3FYY|B Chain B, Crystal Structure Of Divergent Enolase From Oceanobacillus
Iheyensis Complexed With Mg
pdb|3GD6|A Chain A, Crystal Structure Of Divergent Enolase From Oceanobacillus
Iheyensis Complexed With Phosphate
Length = 391
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 104/257 (40%), Gaps = 28/257 (10%)
Query: 94 ENVAIRVELSNGCVGWGEVA---VVPLVT---GDQTKALVKV---REACQFLRQSPPTTL 144
++V +++ G G GE++ +PL + D + L+ + + ++ + T
Sbjct: 22 KHVIVKIHTDEGLTGIGEMSDFSHLPLYSVDLHDLKQGLLSILLGQNPFDLMKINKELTD 81
Query: 145 NFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVS 204
NF E F +R G++ AL D A +DI + GG + P
Sbjct: 82 NFP--ETMYYYEKGSF--IRNGIDNALHDLCAKYLDISVSDFLGGRVKE-KIKVCYPIFR 136
Query: 205 PAEASELAS------KYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFI--LDANE 256
+ E+ S + + GF +L VG+N+ AD + L + I D +
Sbjct: 137 HRFSEEVESNLDVVRQKLEQGFDVFRLYVGKNLDADEEFLSRVKEEFGSRVRIKSYDFSH 196
Query: 257 GYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSL 316
++A + +L + + E P R+D+ GL+ + + Y IS E S
Sbjct: 197 LLNWKDAHRAIKRLTKYDLGLEMIESPAPRNDFDGLYQLR--LKTDYPIS----EHVWSF 250
Query: 317 NDVQKVMQENLASVVNI 333
Q++++++ + NI
Sbjct: 251 KQQQEMIKKDAIDIFNI 267
>pdb|3N4E|A Chain A, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING From Paracoccus Denitrificans Pd1222
pdb|3N4E|B Chain B, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING From Paracoccus Denitrificans Pd1222
pdb|4DWD|A Chain A, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING PROTEIN From Paracoccus Denitrificans Pd1222
Complexed With Magnesium
pdb|4DWD|B Chain B, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING PROTEIN From Paracoccus Denitrificans Pd1222
Complexed With Magnesium
Length = 393
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 105/267 (39%), Gaps = 30/267 (11%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALD----EIAR 153
+R+ +G VGWGE + P + G + +V R+ FL LD + +
Sbjct: 28 VRITAEDGTVGWGEAS--PXLGGIASLGVV-ARDIAPFLEGQEVLDHAVLLDRXXHRLVK 84
Query: 154 ILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA---------SNSLSTAITIPAV- 203
+ P + A ++AL D + P+++L GGA S + A ++ V
Sbjct: 85 LGPEGIATAALAACDIALWDLKGKLLGQPIYKLLGGAWRTRLPCYSSIGGNAARSVDEVV 144
Query: 204 ----SPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHA-VHPHCSFILDANEGY 258
EA + A+ + + +V +I D +A+ + P DAN GY
Sbjct: 145 REVARRVEAEQPAAVKIRWDGDRTRCDV--DIPGDIAKARAVRELLGPDAVIGFDANNGY 202
Query: 259 TSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLND 318
+ A+ V L D+G FE+PV +V+ I+V A E +L
Sbjct: 203 SVGGAIRVGRALEDLGY--SWFEEPVQHYHVGAXGEVAQ----RLDITVSAGEQTYTLQA 256
Query: 319 VQKVMQENLASVVNIKLAKFGVLGTLQ 345
++ ++ + V + G+ G Q
Sbjct: 257 LKDLILSGVRXVQPDIVKXGGITGXXQ 283
>pdb|3SJN|A Chain A, Crystal Structure Of Enolase Spea_3858 (Target Efi-500646)
From Shewanella Pealeana With Magnesium Bound
pdb|3SJN|B Chain B, Crystal Structure Of Enolase Spea_3858 (Target Efi-500646)
From Shewanella Pealeana With Magnesium Bound
Length = 374
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 128/322 (39%), Gaps = 52/322 (16%)
Query: 90 VENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREA------CQFLRQSPPTT 143
+ ++E + +RV + WGE AV+ V D K +V V EA Q ++P T
Sbjct: 5 ITDIEVLHLRVPAMDADCEWGEDAVIVKVHTD--KGIVGVGEADSSPLVVQACIEAPQT- 61
Query: 144 LNFALDEIARILP----------------GSEFASVR-------AGVEMALIDAVANSID 180
NF + + R+L GS + R + +++AL D
Sbjct: 62 -NFYCNGLKRLLIGENALEIERLWNKMYWGSNYMGRRGAGIHAISAIDIALWDIAGQFYG 120
Query: 181 IPLWRLFGGASNS--LSTAITIPAVSPAEASELASKYCKLGFSTLKLN---VGRNITADF 235
+P+ L GG IPA P + + GFS++K +G + D+
Sbjct: 121 VPVHTLLGGKYRDKIRCYGTFIPADKPEDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDY 180
Query: 236 DVLQAI-HAVHPHCSFILD-ANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLH 293
+++A+ A P +D A++ +T + + +L + + + E+PV D
Sbjct: 181 AIVKAVREAAGPEMEVQIDLASKWHTCGHSAMMAKRLEEFNLNWI--EEPVLADSLISYE 238
Query: 294 DVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTL-QIIKATRK 352
+S + ES + + Q+ + ++ A +V + + G + + +I +
Sbjct: 239 KLSRQVSQ----KIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEMKKIYDIAQM 294
Query: 353 SGLHLMIDGMIETRLATGFALH 374
+G L+ G +TG LH
Sbjct: 295 NGTQLIPHG-----FSTGILLH 311
>pdb|2PCE|A Chain A, Crystal Structure Of Putative Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Roseovarius Nubinhibens Ism
pdb|2PCE|B Chain B, Crystal Structure Of Putative Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Roseovarius Nubinhibens Ism
pdb|2PCE|C Chain C, Crystal Structure Of Putative Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Roseovarius Nubinhibens Ism
pdb|2PCE|D Chain D, Crystal Structure Of Putative Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Roseovarius Nubinhibens Ism
pdb|2PCE|E Chain E, Crystal Structure Of Putative Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Roseovarius Nubinhibens Ism
pdb|2PCE|F Chain F, Crystal Structure Of Putative Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Roseovarius Nubinhibens Ism
pdb|2PCE|G Chain G, Crystal Structure Of Putative Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Roseovarius Nubinhibens Ism
pdb|2PCE|H Chain H, Crystal Structure Of Putative Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Roseovarius Nubinhibens Ism
pdb|3FV9|G Chain G, Crystal Structure Of Putative Mandelate
RacemaseMUCONATELACTONIZING Enzyme From Roseovarius
Nubinhibens Ism Complexed With Magnesium
pdb|3FV9|A Chain A, Crystal Structure Of Putative Mandelate
RacemaseMUCONATELACTONIZING Enzyme From Roseovarius
Nubinhibens Ism Complexed With Magnesium
pdb|3FV9|D Chain D, Crystal Structure Of Putative Mandelate
RacemaseMUCONATELACTONIZING Enzyme From Roseovarius
Nubinhibens Ism Complexed With Magnesium
pdb|3FV9|E Chain E, Crystal Structure Of Putative Mandelate
RacemaseMUCONATELACTONIZING Enzyme From Roseovarius
Nubinhibens Ism Complexed With Magnesium
pdb|3FV9|F Chain F, Crystal Structure Of Putative Mandelate
RacemaseMUCONATELACTONIZING Enzyme From Roseovarius
Nubinhibens Ism Complexed With Magnesium
pdb|3FV9|B Chain B, Crystal Structure Of Putative Mandelate
RacemaseMUCONATELACTONIZING Enzyme From Roseovarius
Nubinhibens Ism Complexed With Magnesium
pdb|3FV9|H Chain H, Crystal Structure Of Putative Mandelate
RacemaseMUCONATELACTONIZING Enzyme From Roseovarius
Nubinhibens Ism Complexed With Magnesium
pdb|3FV9|C Chain C, Crystal Structure Of Putative Mandelate
RacemaseMUCONATELACTONIZING Enzyme From Roseovarius
Nubinhibens Ism Complexed With Magnesium
Length = 386
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 117/291 (40%), Gaps = 24/291 (8%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQS----PPTTLNFALDEIAR 153
+ +E G GWGE P + R A + L + P + D +
Sbjct: 38 VSIETDTGLTGWGES--TPFGSTYIAAHAGGTRAALELLAPAILGMDPRQHDRIWDRMRD 95
Query: 154 ILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELA 212
L G A RA +++A D A + +PL + GG + + +I +P
Sbjct: 96 TLKGHRDA--RAALDIACWDIAAQAAGLPLCDMTGGRVAGPVPVISSIGGDTPEAMRAKV 153
Query: 213 SKYCKLGFSTLKLNVGRNITADFDVLQA------IHAVHPHCSFILDANEGYTSEEAVEV 266
+++ GF + +G + L A + P ++ DAN G T E A+ +
Sbjct: 154 ARHRAQGFKGHSIKIGASEAEGGPALDAERITACLADRQPGEWYLADANNGLTVEHALRM 213
Query: 267 LGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQEN 326
L L + ++ E P W+ + R + ++ DE ++ D+ ++++
Sbjct: 214 LSLLPPG--LDIVLEAPCA--SWA----ETKSLRARCALPLLLDELIQTETDLIAAIRDD 265
Query: 327 LASVVNIKLAKFGVLGTLQIIKA-TRKSGLHLMIDGMIETRLATGFALHLA 376
L V +K++K G + + +A +G+ + + + ++++ LHLA
Sbjct: 266 LCDGVGLKVSKQGGITPMLRQRAIAAAAGMVMSVQDTVGSQISFAAILHLA 316
>pdb|4E4U|A Chain A, Crystal Structure Of A Putative Mandelate RacemaseMUCONATE
Lactonizing Enzyme (Target Psi-200780) From Burkholderia
Sar-1
Length = 412
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 81/210 (38%), Gaps = 30/210 (14%)
Query: 156 PGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAIT--IPAVSPAE------ 207
P V +G+EMA D + + P++ L GG + + T P + E
Sbjct: 86 PDLTMMGVVSGLEMACWDIIGKAAAKPVYELLGGRIHERLRSYTYLYPKNAKGEYDYDDP 145
Query: 208 --ASELASKYCKLGFSTLKLNVGRNITA------DFDVL--------QAIHAVHPHCSFI 251
A+E A++ KLGF+ +K + TA +VL + AV +
Sbjct: 146 DLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGSKADLL 205
Query: 252 LDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADE 311
+ A+ + +L P+ FE+PV + V+ I + E
Sbjct: 206 FGTHGQMVPSSAIRLAKRLEKYD--PLWFEEPVPPGQEEAIAQVAKHT----SIPIATGE 259
Query: 312 SCRSLNDVQKVMQENLASVVNIKLAKFGVL 341
+ + K++Q AS++ + +A+ G L
Sbjct: 260 RLTTKYEFHKLLQAGGASILQLNVARVGGL 289
>pdb|2GDQ|A Chain A, Crystal Structure Of Mandelate Racemase/muconate
Lactonizing Enzyme From Bacillus Subtilis At 1.8 A
Resolution
pdb|2GDQ|B Chain B, Crystal Structure Of Mandelate Racemase/muconate
Lactonizing Enzyme From Bacillus Subtilis At 1.8 A
Resolution
pdb|2GGE|A Chain A, Crystal Structure Of Mandelate RacemaseMUCONATE
Lactonizing Enzyme From Bacillus Subtilis Complexed With
Mg++ At 1.8 A
pdb|2GGE|B Chain B, Crystal Structure Of Mandelate RacemaseMUCONATE
Lactonizing Enzyme From Bacillus Subtilis Complexed With
Mg++ At 1.8 A
pdb|2GGE|C Chain C, Crystal Structure Of Mandelate RacemaseMUCONATE
Lactonizing Enzyme From Bacillus Subtilis Complexed With
Mg++ At 1.8 A
pdb|2GGE|D Chain D, Crystal Structure Of Mandelate RacemaseMUCONATE
Lactonizing Enzyme From Bacillus Subtilis Complexed With
Mg++ At 1.8 A
pdb|2GGE|E Chain E, Crystal Structure Of Mandelate RacemaseMUCONATE
Lactonizing Enzyme From Bacillus Subtilis Complexed With
Mg++ At 1.8 A
pdb|2GGE|F Chain F, Crystal Structure Of Mandelate RacemaseMUCONATE
Lactonizing Enzyme From Bacillus Subtilis Complexed With
Mg++ At 1.8 A
pdb|2GGE|G Chain G, Crystal Structure Of Mandelate RacemaseMUCONATE
Lactonizing Enzyme From Bacillus Subtilis Complexed With
Mg++ At 1.8 A
pdb|2GGE|H Chain H, Crystal Structure Of Mandelate RacemaseMUCONATE
Lactonizing Enzyme From Bacillus Subtilis Complexed With
Mg++ At 1.8 A
Length = 382
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 80/206 (38%), Gaps = 37/206 (17%)
Query: 98 IRVELSNGCVGWGEVA-------------VVPLVTGDQTKALVKVREACQFLRQSPPTTL 144
IR+ +G GWGE ++P + G Q + + + Q Q + +
Sbjct: 37 IRIITESGIDGWGECVDWLPALHVGFTKRIIPFLLGKQAGSRLSLVRTIQKWHQRAASAV 96
Query: 145 NFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVS 204
+ AL EIA + G +IP++ F S+ S +VS
Sbjct: 97 SMALTEIAAKAADCSVCELWGGRYRE---------EIPVYASFQSYSD--SPQWISRSVS 145
Query: 205 PAEASELASKYCKLGFSTLKLNV-GRNITADFDVLQAI-HAVHPHCSFILDANEGYTSEE 262
EA K GF +K+ + G + D + A+ H + ILDAN+ Y +
Sbjct: 146 NVEAQ------LKKGFEQIKVKIGGTSFKEDVRHINALQHTAGSSITMILDANQSYDAAA 199
Query: 263 AVE---VLGKLNDMGVI--PVLFEQP 283
A + + ++G + P+ F+QP
Sbjct: 200 AFKWERYFSEWTNIGWLEEPLPFDQP 225
>pdb|1DTN|A Chain A, Mandelate Racemase Mutant D270n Co-crystallized With
(s)-atrolactate
Length = 359
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 4/135 (2%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFSTLK 224
AG++MA DA+ + PL +L G + + + A+E A +LGF +K
Sbjct: 105 AGIDMAAWDALGKVHETPLVKLLGANARPVQAYDSHSLDGVKLATERAVTAAELGFRAVK 164
Query: 225 LNVGR-NITADFDVLQAI-HAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQ 282
+G + D V+++I AV ++D N+ A++ L GV E+
Sbjct: 165 TKIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGV--TWIEE 222
Query: 283 PVHRDDWSGLHDVSN 297
P + D+ G + +
Sbjct: 223 PTLQHDYEGHQRIQS 237
>pdb|1MRA|A Chain A, Mandelate Racemase Mutant D270n Co-Crystallized With
(S)-Atrolactate
Length = 359
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 4/135 (2%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFSTLK 224
AG++MA DA+ + PL +L G + + + A+E A +LGF +K
Sbjct: 105 AGIDMAAWDALGKVHETPLVKLLGANARPVQAYDSHSLDGVKLATERAVTAAELGFRAVK 164
Query: 225 LNVGR-NITADFDVLQAI-HAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQ 282
+G + D V+++I AV ++D N+ A++ L GV E+
Sbjct: 165 TKIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGV--TWIEE 222
Query: 283 PVHRDDWSGLHDVSN 297
P + D+ G + +
Sbjct: 223 PTLQHDYEGHQRIQS 237
>pdb|1MNS|A Chain A, On The Role Of Lysine 166 In The Mechanism Of Mandelate
Racemase From Pseudomonas Putida: Mechanistic And
Crystallographic Evidence For Stereospecific Alkylation
By (R)-Alpha-Phenylglycidate
pdb|2MNR|A Chain A, Mechanism Of The Reaction Catalyzed By Mandelate Racemase.
2. Crystal Structure Of Mandelate Racemase At 2.5
Angstroms Resolution: Identification Of The Active Site
And Possible Catalytic Residues
Length = 357
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 4/135 (2%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFSTLK 224
AG++MA DA+ + PL +L G + + + A+E A +LGF +K
Sbjct: 103 AGIDMAAWDALGKVHETPLVKLLGANARPVQAYDSHSLDGVKLATERAVTAAELGFRAVK 162
Query: 225 LNVGR-NITADFDVLQAI-HAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQ 282
+G + D V+++I AV ++D N+ A++ L GV E+
Sbjct: 163 TKIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGV--TWIEE 220
Query: 283 PVHRDDWSGLHDVSN 297
P + D+ G + +
Sbjct: 221 PTLQHDYEGHQRIQS 235
>pdb|1MDR|A Chain A, The Role Of Lysine 166 In The Mechanism Of Mandelate
Racemase From Pseudomonas Putida: Mechanistic And
Crystallographic Evidence For Stereospecific Alkylation
By (r)-alpha-phenylglycidate
Length = 359
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 4/135 (2%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFSTLK 224
AG++MA DA+ + PL +L G + + + A+E A +LGF +K
Sbjct: 105 AGIDMAAWDALGKVHETPLVKLLGANARPVQAYDSHSLDGVKLATERAVTAAELGFRAVK 164
Query: 225 LNVGR-NITADFDVLQAI-HAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQ 282
+G + D V+++I AV ++D N+ A++ L GV E+
Sbjct: 165 TKIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGV--TWIEE 222
Query: 283 PVHRDDWSGLHDVSN 297
P + D+ G + +
Sbjct: 223 PTLQHDYEGHQRIQS 237
>pdb|1MDL|A Chain A, Mandelate Racemase Mutant K166r Co-Crystallized With (R)-
Mandelate
Length = 359
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 4/135 (2%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFSTLK 224
AG++MA DA+ + PL +L G + + + A+E A +LGF +K
Sbjct: 105 AGIDMAAWDALGKVHETPLVKLLGANARPVQAYDSHSLDGVKLATERAVTAAELGFRAVK 164
Query: 225 LNVGR-NITADFDVLQAI-HAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQ 282
+G + D V+++I AV ++D N+ A++ L GV E+
Sbjct: 165 TRIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGV--TWIEE 222
Query: 283 PVHRDDWSGLHDVSN 297
P + D+ G + +
Sbjct: 223 PTLQHDYEGHQRIQS 237
>pdb|3UXK|A Chain A, P. Putida Mandelate Racemase Co-Crystallized With The
Intermediate Analogue Benzohydroxamate
pdb|3UXK|B Chain B, P. Putida Mandelate Racemase Co-Crystallized With The
Intermediate Analogue Benzohydroxamate
pdb|3UXK|C Chain C, P. Putida Mandelate Racemase Co-Crystallized With The
Intermediate Analogue Benzohydroxamate
pdb|3UXK|D Chain D, P. Putida Mandelate Racemase Co-Crystallized With The
Intermediate Analogue Benzohydroxamate
pdb|3UXL|A Chain A, P. Putida Mandelate Racemase Co-Crystallized With The
Intermediate Analogue Cupferron
pdb|3UXL|B Chain B, P. Putida Mandelate Racemase Co-Crystallized With The
Intermediate Analogue Cupferron
pdb|3UXL|C Chain C, P. Putida Mandelate Racemase Co-Crystallized With The
Intermediate Analogue Cupferron
pdb|3UXL|D Chain D, P. Putida Mandelate Racemase Co-Crystallized With The
Intermediate Analogue Cupferron
Length = 383
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 4/135 (2%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFSTLK 224
AG++MA DA+ + PL +L G + + + A+E A +LGF +K
Sbjct: 129 AGIDMAAWDALGKVHETPLVKLLGANARPVQAYDSHSLDGVKLATERAVTAAELGFRAVK 188
Query: 225 LNVGR-NITADFDVLQAI-HAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQ 282
+G + D V+++I AV ++D N+ A++ L GV E+
Sbjct: 189 TKIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGV--TWIEE 246
Query: 283 PVHRDDWSGLHDVSN 297
P + D+ G + +
Sbjct: 247 PTLQHDYEGHQRIQS 261
>pdb|3H7V|A Chain A, Crystal Structure Of O-Succinylbenzoate Synthase From
Thermosynechococcus Elongatus Bp-1 Complexed With Mg In
The Active Site
Length = 330
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 89/249 (35%), Gaps = 32/249 (12%)
Query: 95 NVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALD-EIAR 153
+ +R+E G VG+GE+A +P + A + + CQ L P L + I
Sbjct: 28 GIYLRLEDEQGQVGYGEIAPLPGWGSETLNADIAL---CQQL----PGHLTPEIXATIPE 80
Query: 154 ILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELAS 213
LP ++F A + + P+ L G +L E
Sbjct: 81 ALPAAQFGFATAWQSVGRLPYRVRPW--PICALLGSGQAAL---------------EQWQ 123
Query: 214 KYCKLGFSTLKLNVGRNITADFDVLQAIHAVH--PHCSFILDANEGYTSEEAVEVLGKLN 271
+ + G +T K VG + + P LDAN + A L+
Sbjct: 124 QSWQRGQTTFKWKVGVXSPEEEQAILKALLAALPPGAKLRLDANGSWDRATANRWFAWLD 183
Query: 272 DMGVIPVLF-EQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASV 330
G + + EQP+ D W L ++ T ++ DES S +VQ+ +
Sbjct: 184 RHGNGKIEYVEQPLPPDQWQALLSLAQ----TVTTAIALDESVVSAAEVQRWVDRGWPGF 239
Query: 331 VNIKLAKFG 339
IK A FG
Sbjct: 240 FVIKTALFG 248
>pdb|2OZT|A Chain A, Crystal Structure Of O-Succinylbenzoate Synthase From
Thermosynechococcus Elongatus Bp-1
Length = 332
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 89/249 (35%), Gaps = 32/249 (12%)
Query: 95 NVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALD-EIAR 153
+ +R+E G VG+GE+A +P + A + + CQ L P L + I
Sbjct: 30 GIYLRLEDEQGQVGYGEIAPLPGWGSETLNADIAL---CQQL----PGHLTPEIXATIPE 82
Query: 154 ILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELAS 213
LP ++F A + + P+ L G +L E
Sbjct: 83 ALPAAQFGFATAWQSVGRLPYRVRPW--PICALLGSGQAAL---------------EQWQ 125
Query: 214 KYCKLGFSTLKLNVGRNITADFDVLQAIHAVH--PHCSFILDANEGYTSEEAVEVLGKLN 271
+ + G +T K VG + + P LDAN + A L+
Sbjct: 126 QSWQRGQTTFKWKVGVXSPEEEQAILKALLAALPPGAKLRLDANGSWDRATANRWFAWLD 185
Query: 272 DMGVIPVLF-EQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASV 330
G + + EQP+ D W L ++ T ++ DES S +VQ+ +
Sbjct: 186 RHGNGKIEYVEQPLPPDQWQALLSLAQ----TVTTAIALDESVVSAAEVQRWVDRGWPGF 241
Query: 331 VNIKLAKFG 339
IK A FG
Sbjct: 242 FVIKTALFG 250
>pdb|4E8G|A Chain A, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup) From Paracococus Denitrificans Pd1222 (Target
Nysgrc-012907) With Bound Mg
pdb|4E8G|B Chain B, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup) From Paracococus Denitrificans Pd1222 (Target
Nysgrc-012907) With Bound Mg
Length = 391
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 19/259 (7%)
Query: 90 VENVENVAIRVELSNGCVGWGEVAVV-PLVTGDQT-KALVKVREACQFLRQSPPTTLNFA 147
V +++ +++ +G GWGE V P A + E L + P
Sbjct: 49 VWSLQTTLVKIVADSGLAGWGETCPVGPTYAPSHALGARAALAEXAPGLIGANPLQPLVL 108
Query: 148 LDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPA 206
+L G +A +A +++A D + + L GG A+ + + P
Sbjct: 109 RRRXDGLLCGHNYA--KAAIDIAAYDLXGKHYGVRVADLLGGVAAERVPSYYATGIGQPD 166
Query: 207 EASELASKYCKLGFSTLKLNV-GRNITADFDVLQAI--HAVHPHCSFILDANEGYTSEEA 263
E + +A++ GF L++ + GR + D + ++ + +D N S +A
Sbjct: 167 EIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWERIRGTGTRLAVDGNRSLPSRDA 226
Query: 264 VEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNF-ARDTYGISVVADESCRSLNDVQKV 322
+ + + + IP + EQP + L +++ R +GI + DES L+ V +
Sbjct: 227 LRLSRECPE---IPFVLEQPCNT-----LEEIAAIRGRVQHGIYL--DESGEDLSTVIRA 276
Query: 323 MQENLASVVNIKLAKFGVL 341
+ L KL + G L
Sbjct: 277 AGQGLCDGFGXKLTRIGGL 295
>pdb|3TOY|A Chain A, Crystal Structure Of Enolase Brado_4202 (Target
Efi-501651) From Bradyrhizobium Sp. Ors278 With Calcium
And Acetate Bound
pdb|3TOY|B Chain B, Crystal Structure Of Enolase Brado_4202 (Target
Efi-501651) From Bradyrhizobium Sp. Ors278 With Calcium
And Acetate Bound
pdb|3TOY|C Chain C, Crystal Structure Of Enolase Brado_4202 (Target
Efi-501651) From Bradyrhizobium Sp. Ors278 With Calcium
And Acetate Bound
pdb|3TOY|D Chain D, Crystal Structure Of Enolase Brado_4202 (Target
Efi-501651) From Bradyrhizobium Sp. Ors278 With Calcium
And Acetate Bound
pdb|3TTE|A Chain A, Crystal Structure Of Enolase Brado_4202 (Target
Efi-501651) From Bradyrhizobium Complexed With Magnesium
And Mandelic Acid
pdb|3TTE|B Chain B, Crystal Structure Of Enolase Brado_4202 (Target
Efi-501651) From Bradyrhizobium Complexed With Magnesium
And Mandelic Acid
Length = 383
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 6/155 (3%)
Query: 141 PTTLNFALDEIARILPGSEFASVR-AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAIT 199
P L A+D R+L + +G++MA DA+ P+ L GG++ + +
Sbjct: 103 PVDLMKAMDAKFRLLGWQGLVGMAVSGLDMAFWDALGQLAGKPVVELLGGSARPIPAYDS 162
Query: 200 IPAVSPAEASELASKYC-KLGFSTLKLNVGR-NITADFDVLQAIHA-VHPHCSFILDANE 256
+ + C + GF +K G ++ D +++ + A + P + +LD N+
Sbjct: 163 YGVLDARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALLGPDIALMLDFNQ 222
Query: 257 GYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSG 291
EA + +L D + E+PV +++ SG
Sbjct: 223 SLDPAEATRRIARLADYDL--TWIEEPVPQENLSG 255
>pdb|4GIR|A Chain A, Crystal Structure Of An Enolase Family Member From Vibrio
Harveyi (Efi-Target 501692) With Homology To Mannonate
Dehydratase, With Mg, Ethylene Glycol And Sulfate Bound
(Ordered Loops, Space Group P41212)
pdb|4GIR|B Chain B, Crystal Structure Of An Enolase Family Member From Vibrio
Harveyi (Efi-Target 501692) With Homology To Mannonate
Dehydratase, With Mg, Ethylene Glycol And Sulfate Bound
(Ordered Loops, Space Group P41212)
pdb|4GIR|C Chain C, Crystal Structure Of An Enolase Family Member From Vibrio
Harveyi (Efi-Target 501692) With Homology To Mannonate
Dehydratase, With Mg, Ethylene Glycol And Sulfate Bound
(Ordered Loops, Space Group P41212)
pdb|4GIR|D Chain D, Crystal Structure Of An Enolase Family Member From Vibrio
Harveyi (Efi-Target 501692) With Homology To Mannonate
Dehydratase, With Mg, Ethylene Glycol And Sulfate Bound
(Ordered Loops, Space Group P41212)
pdb|4GIS|A Chain A, Crystal Structure Of An Enolase Family Member From Vibrio
Harveyi (Efi-Target 501692) With Homology To Mannonate
Dehydratase, With Mg, Glycerol And Dicarboxylates Bound
(Mixed Loops, Space Group I4122)
pdb|4GIS|B Chain B, Crystal Structure Of An Enolase Family Member From Vibrio
Harveyi (Efi-Target 501692) With Homology To Mannonate
Dehydratase, With Mg, Glycerol And Dicarboxylates Bound
(Mixed Loops, Space Group I4122)
pdb|4GGH|A Chain A, Crystal Structure Of An Enolase Family Member From Vibrio
Harveyi (Efi-Target 501692) With Homology To Mannonate
Dehydratase, With Mg, Hepes, And Ethylene Glycol Bound
(Ordered Loops, Space Group C2221)
pdb|4GGH|B Chain B, Crystal Structure Of An Enolase Family Member From Vibrio
Harveyi (Efi-Target 501692) With Homology To Mannonate
Dehydratase, With Mg, Hepes, And Ethylene Glycol Bound
(Ordered Loops, Space Group C2221)
pdb|4GGH|C Chain C, Crystal Structure Of An Enolase Family Member From Vibrio
Harveyi (Efi-Target 501692) With Homology To Mannonate
Dehydratase, With Mg, Hepes, And Ethylene Glycol Bound
(Ordered Loops, Space Group C2221)
pdb|4GGH|D Chain D, Crystal Structure Of An Enolase Family Member From Vibrio
Harveyi (Efi-Target 501692) With Homology To Mannonate
Dehydratase, With Mg, Hepes, And Ethylene Glycol Bound
(Ordered Loops, Space Group C2221)
Length = 422
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEA-SELASKYCKLGFSTL 223
+GV+MAL D A ++PL +LFGG S T E E KY + G+ +
Sbjct: 114 SGVDMALWDIKAKIANMPLHQLFGGKSRDAIQVYTHATSDTMEGLYEQVDKYLEQGYQHI 173
Query: 224 KLNVG 228
+ +G
Sbjct: 174 RCQLG 178
>pdb|3RCY|A Chain A, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME- Like Protein From Roseovarius Sp.
Tm1035
pdb|3RCY|B Chain B, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME- Like Protein From Roseovarius Sp.
Tm1035
pdb|3RCY|C Chain C, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME- Like Protein From Roseovarius Sp.
Tm1035
pdb|3RCY|D Chain D, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME- Like Protein From Roseovarius Sp.
Tm1035
pdb|3RCY|E Chain E, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME- Like Protein From Roseovarius Sp.
Tm1035
pdb|3RCY|F Chain F, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME- Like Protein From Roseovarius Sp.
Tm1035
pdb|3RCY|G Chain G, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME- Like Protein From Roseovarius Sp.
Tm1035
pdb|3RCY|H Chain H, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING ENZYME- Like Protein From Roseovarius Sp.
Tm1035
Length = 433
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 86/210 (40%), Gaps = 31/210 (14%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITI----------PAVSPAE-ASELAS 213
+G+E+A D + + P+W L GG N A T P + A+ A+E A+
Sbjct: 96 SGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMAAESAA 155
Query: 214 KYCKLGFSTLKLNV-------GRNITADFDVLQAIH-------AVHPHCSFILDANEGYT 259
G++ +K + G ++ A D+ ++ AV + + +T
Sbjct: 156 DCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFT 215
Query: 260 SEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDV 319
+ A+ + + P+ +E+PV D+ + V+ R I V E + +
Sbjct: 216 TAGAIRLGQAIEPYS--PLWYEEPVPPDNVGAMAQVARAVR----IPVATGERLTTKAEF 269
Query: 320 QKVMQENLASVVNIKLAKFGVLGTLQIIKA 349
V++E A+++ L + G + ++ + A
Sbjct: 270 APVLREGAAAILQPALGRAGGIWEMKKVAA 299
>pdb|3MZN|A Chain A, Crystal Structure Of Probable Glucarate Dehydratase From
Chromohalobacter Salexigens Dsm 3043
pdb|3MZN|B Chain B, Crystal Structure Of Probable Glucarate Dehydratase From
Chromohalobacter Salexigens Dsm 3043
pdb|3NFU|A Chain A, Crystal Structure Of Probable Glucarate Dehydratase From
Chromohalobacter Salexigens Dsm 3043 Complexed With
Magnesium
pdb|3NFU|B Chain B, Crystal Structure Of Probable Glucarate Dehydratase From
Chromohalobacter Salexigens Dsm 3043 Complexed With
Magnesium
Length = 450
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 202 AVSPAEASELA-SKYCKLGFSTLKLNVG-RNITADFDVLQAIHAVHPHCSFILDANEGYT 259
A++P + LA + Y + GF KL G + D ++A+H P LD N +
Sbjct: 180 AMTPEAVANLARAAYDRYGFKDFKLKGGVLRGEEEADCIRALHEAFPEARLALDPNGAWK 239
Query: 260 SEEAVEVL 267
+EAV VL
Sbjct: 240 LDEAVRVL 247
>pdb|2HXT|A Chain A, Crystal Structure Of L-Fuconate Dehydratase From
Xanthomonas Campestris Liganded With Mg++ And
D-Erythronohydroxamate
Length = 441
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 210 ELASKYCKLGFSTLKLNVGRNITADFDVLQ-AIHAVHPHCSFILDANEGYTSEEAVEVLG 268
LA + GF T+KL VG N+ D + A A+ P + +DAN+ + A++ +
Sbjct: 204 RLAKEAVADGFRTIKLKVGANVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAIDWMR 263
Query: 269 KLNDMGVIPVLFEQPVHRDD 288
+L + + E+P DD
Sbjct: 264 QLAEFDI--AWIEEPTSPDD 281
>pdb|2HNE|A Chain A, Crystal Structure Of L-fuconate Dehydratase From
Xanthomonas Campestris Pv. Campestris Str. Atcc 33913
pdb|2HNE|B Chain B, Crystal Structure Of L-fuconate Dehydratase From
Xanthomonas Campestris Pv. Campestris Str. Atcc 33913
pdb|2HNE|C Chain C, Crystal Structure Of L-fuconate Dehydratase From
Xanthomonas Campestris Pv. Campestris Str. Atcc 33913
pdb|2HNE|D Chain D, Crystal Structure Of L-fuconate Dehydratase From
Xanthomonas Campestris Pv. Campestris Str. Atcc 33913
Length = 436
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 210 ELASKYCKLGFSTLKLNVGRNITADFDVLQ-AIHAVHPHCSFILDANEGYTSEEAVEVLG 268
LA + GF T+KL VG N+ D + A A+ P + +DAN+ + A++ +
Sbjct: 204 RLAKEAVADGFRTIKLKVGANVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAIDWMR 263
Query: 269 KLNDMGVIPVLFEQPVHRDD 288
+L + + E+P DD
Sbjct: 264 QLAEFDI--AWIEEPTSPDD 281
>pdb|4IL2|A Chain A, Crystal Structure Of D-mannonate Dehydratase (rspa) From
E. Coli Cft073 (efi Target Efi-501585)
pdb|4IL2|B Chain B, Crystal Structure Of D-mannonate Dehydratase (rspa) From
E. Coli Cft073 (efi Target Efi-501585)
pdb|4IL2|C Chain C, Crystal Structure Of D-mannonate Dehydratase (rspa) From
E. Coli Cft073 (efi Target Efi-501585)
pdb|4IL2|D Chain D, Crystal Structure Of D-mannonate Dehydratase (rspa) From
E. Coli Cft073 (efi Target Efi-501585)
Length = 426
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 162 SVRAGVEMALIDAVANSIDIPLWRLFGGASNS-LSTAITIPAVSPAEASELASKYCKLGF 220
S + V+MAL D A + ++PL++L GGAS + S EA + +++ +LGF
Sbjct: 106 SAISAVDMALWDIKAKAANMPLYQLLGGASREGVMVYCHTTGHSIDEALDDYARHQELGF 165
Query: 221 STLKLNVG 228
+++ G
Sbjct: 166 KAIRVQCG 173
>pdb|2HXU|A Chain A, Crystal Structure Of K220a Mutant Of L-Fuconate
Dehydratase From Xanthomonas Campestris Liganded With
Mg++ And L-Fuconate
Length = 441
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 210 ELASKYCKLGFSTLKLNVGRNITADFDVLQ-AIHAVHPHCSFILDANEGYTSEEAVEVLG 268
LA + GF T+KL VG N+ D + A A+ P + +DAN+ + A++ +
Sbjct: 204 RLAKEAVADGFRTIKLAVGANVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAIDWMR 263
Query: 269 KLNDMGVIPVLFEQPVHRDD 288
+L + + E+P DD
Sbjct: 264 QLAEFDI--AWIEEPTSPDD 281
>pdb|4GME|A Chain A, Crystal Structure Of Mannonate Dehydratase (Target
Efi-502209) From Caulobacter Crescentus Cb15 Complexed
With Magnesium And D-Mannonate
pdb|4GME|C Chain C, Crystal Structure Of Mannonate Dehydratase (Target
Efi-502209) From Caulobacter Crescentus Cb15 Complexed
With Magnesium And D-Mannonate
Length = 426
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 18/139 (12%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASE----LASKYCKLGF 220
A V+MAL D +P+++L GGA T +T+ + E E A KY +G+
Sbjct: 111 AAVDMALWDIKGKVAGLPVYQLLGGACR---TGVTVYGHANGETIEDTIAEAVKYKAMGY 167
Query: 221 STLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF 280
++L G L + + V F A+ +E LN +P LF
Sbjct: 168 KAIRLQTG------VPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNS---VPKLF 218
Query: 281 EQPVHRDDWSG--LHDVSN 297
E+ W LHDV +
Sbjct: 219 ERAREVLGWDVHLLHDVHH 237
>pdb|3VCN|A Chain A, Crystal Structure Of Mannonate Dehydratase (Target
Efi-502209) From Caulobacter Crescentus Cb15
pdb|3VCN|C Chain C, Crystal Structure Of Mannonate Dehydratase (Target
Efi-502209) From Caulobacter Crescentus Cb15
Length = 425
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 18/139 (12%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASE----LASKYCKLGF 220
A V+MAL D +P+++L GGA T +T+ + E E A KY +G+
Sbjct: 110 AAVDMALWDIKGKVAGLPVYQLLGGACR---TGVTVYGHANGETIEDTIAEAVKYKAMGY 166
Query: 221 STLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF 280
++L G L + + V F A+ +E LN +P LF
Sbjct: 167 KAIRLQTG------VPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNS---VPKLF 217
Query: 281 EQPVHRDDWSG--LHDVSN 297
E+ W LHDV +
Sbjct: 218 ERAREVLGWDVHLLHDVHH 236
>pdb|1YEY|A Chain A, Crystal Structure Of L-Fuconate Dehydratase From
Xanthomonas Campestris Pv. Campestris Str. Atcc 33913
pdb|1YEY|B Chain B, Crystal Structure Of L-Fuconate Dehydratase From
Xanthomonas Campestris Pv. Campestris Str. Atcc 33913
pdb|1YEY|C Chain C, Crystal Structure Of L-Fuconate Dehydratase From
Xanthomonas Campestris Pv. Campestris Str. Atcc 33913
pdb|1YEY|D Chain D, Crystal Structure Of L-Fuconate Dehydratase From
Xanthomonas Campestris Pv. Campestris Str. Atcc 33913
Length = 444
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 210 ELASKYCKLGFSTLKLNVGRNITADFDVLQ-AIHAVHPHCSFILDANEGYTSEEAVEVLG 268
LA + GF T+KL VG N+ D + A A+ P + +DAN+ + A++
Sbjct: 207 RLAKEAVADGFRTIKLKVGANVQDDIRRCRLARAAIGPDIAXAVDANQRWDVGPAIDWXR 266
Query: 269 KLNDMGVIPVLFEQPVHRDD 288
+L + + E+P DD
Sbjct: 267 QLAEFDI--AWIEEPTSPDD 284
>pdb|4HNL|A Chain A, Crystal Structure Of Enolase Egbg_01401 (Target
Efi-502226) From Enterococcus Gallinarum Eg2
Length = 421
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 20/71 (28%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKY--------- 215
+G++MAL D D+PL++L GG + + IPA + A A L Y
Sbjct: 113 SGIDMALWDIKGQLADMPLYQLLGGKART-----AIPAYTHAVADNLDDLYHEIDRFLAA 167
Query: 216 ------CKLGF 220
C+LGF
Sbjct: 168 GYRYIRCQLGF 178
>pdb|3TJI|A Chain A, Crystal Structure Of An Enolase From Enterobacter Sp. 638
(Efi Target Efi-501662) With Bound Mg
pdb|3TJI|B Chain B, Crystal Structure Of An Enolase From Enterobacter Sp. 638
(Efi Target Efi-501662) With Bound Mg
pdb|3TJI|C Chain C, Crystal Structure Of An Enolase From Enterobacter Sp. 638
(Efi Target Efi-501662) With Bound Mg
pdb|3TJI|D Chain D, Crystal Structure Of An Enolase From Enterobacter Sp. 638
(Efi Target Efi-501662) With Bound Mg
Length = 422
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 20/71 (28%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKY--------- 215
+GV+MAL D +PL++LFGG S IPA S A L + +
Sbjct: 114 SGVDMALWDIKGQLAGMPLYQLFGGKSRD-----AIPAYSHASGETLEALFASVDALIAQ 168
Query: 216 ------CKLGF 220
C+LGF
Sbjct: 169 GYRHIRCQLGF 179
>pdb|3GY1|A Chain A, Crystal Structure Of Putative Mandelate RacemaseMUCONATE
LACTONIZING Protein From Clostridium Beijerinckii Ncimb
8052
pdb|3GY1|B Chain B, Crystal Structure Of Putative Mandelate RacemaseMUCONATE
LACTONIZING Protein From Clostridium Beijerinckii Ncimb
8052
Length = 408
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYC------KL 218
+GV+MAL D ++PL++LFGG S I A + A A L Y K
Sbjct: 93 SGVDMALWDIKGKLANMPLYQLFGGKSRD-----AIAAYTHAVADNLEDLYTEIDEIRKK 147
Query: 219 GFSTLKLNVG 228
G+ ++ +G
Sbjct: 148 GYQHIRCQLG 157
>pdb|2POZ|A Chain A, Crystal Structure Of A Putative Dehydratase From
Mesorhizobium Loti
pdb|2POZ|B Chain B, Crystal Structure Of A Putative Dehydratase From
Mesorhizobium Loti
pdb|2POZ|C Chain C, Crystal Structure Of A Putative Dehydratase From
Mesorhizobium Loti
pdb|2POZ|D Chain D, Crystal Structure Of A Putative Dehydratase From
Mesorhizobium Loti
pdb|2POZ|E Chain E, Crystal Structure Of A Putative Dehydratase From
Mesorhizobium Loti
pdb|2POZ|F Chain F, Crystal Structure Of A Putative Dehydratase From
Mesorhizobium Loti
pdb|2POZ|G Chain G, Crystal Structure Of A Putative Dehydratase From
Mesorhizobium Loti
pdb|2POZ|H Chain H, Crystal Structure Of A Putative Dehydratase From
Mesorhizobium Loti
Length = 392
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 26/161 (16%)
Query: 160 FASVRAGVEMALIDAVANSIDIPLWRLFGG---------ASNSLSTAITIPAVSPAEASE 210
FA + A +E AL D + +P++ LFGG A+ A T + A
Sbjct: 90 FAGISA-IEQALWDIKGKCLGVPVYELFGGKIRDRVRAYANGWYGAADTPDEFARAVERP 148
Query: 211 LASKYCKLGFSTLKLNVG--------RNITAD-----FDVLQAIH-AVHPHCSFILDANE 256
L Y L F L VG R+ +A+ + ++A+ A P +D +
Sbjct: 149 LKEGYGALKFYPLAQRVGSALQHVTRRSXSAEAIELAYRRVKAVRDAAGPEIELXVDLSG 208
Query: 257 GYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSN 297
G T++E + K+ ++ + E+P D L +S
Sbjct: 209 GLTTDETIRFCRKIGELDI--CFVEEPCDPFDNGALKVISE 247
>pdb|3S47|A Chain A, Crystal Structure Of Enolase Superfamily Member From
Clostridium Beijerincki Complexed With Mg
pdb|3S47|B Chain B, Crystal Structure Of Enolase Superfamily Member From
Clostridium Beijerincki Complexed With Mg
Length = 401
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYC------KL 218
+GV+MAL D ++PL++LFGG S I A + A A L Y K
Sbjct: 93 SGVDMALWDIKGKLANMPLYQLFGGKSRD-----AIAAYTHAVADNLEDLYTEIDEIRKK 147
Query: 219 GFSTLKLNVG 228
G+ ++ +G
Sbjct: 148 GYQHIRCQLG 157
>pdb|4FI4|A Chain A, Crystal Structure Of Mannonate Dehydratase Prk15072
(Target Efi- 502214) From Caulobacter Sp. K31
pdb|4FI4|B Chain B, Crystal Structure Of Mannonate Dehydratase Prk15072
(Target Efi- 502214) From Caulobacter Sp. K31
pdb|4FI4|C Chain C, Crystal Structure Of Mannonate Dehydratase Prk15072
(Target Efi- 502214) From Caulobacter Sp. K31
Length = 425
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASE----LASKYCKLGF 220
A V+MAL D A +PL++L GGA + + + E E A KY LG+
Sbjct: 110 AAVDMALWDIKAKLAGMPLYQLLGGACRE---GVMVYGHANGETIEDTIAEARKYQALGY 166
Query: 221 STLKLNVG 228
++L G
Sbjct: 167 KAIRLQSG 174
>pdb|3T4W|A Chain A, The Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Sulfitobacter Sp
pdb|3T4W|B Chain B, The Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Sulfitobacter Sp
pdb|3T4W|C Chain C, The Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Sulfitobacter Sp
pdb|3T4W|D Chain D, The Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING Enzyme From Sulfitobacter Sp
Length = 432
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 118/314 (37%), Gaps = 57/314 (18%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAIT----IPA-------VSPAEASELAS 213
+G+E+A D + D P++ L GG N T +P SP A+E A
Sbjct: 117 SGLEIACWDILGKDRDRPVYALIGGRMNERVRGYTYLYPLPHHDMTAFWTSPEMAAESAL 176
Query: 214 KYCKLGFSTLKLNV-------GRNITADFDVLQAI-------HAVHPHCSFILDANEGYT 259
G++ +K + G ++ A D+ Q++ AV + + +T
Sbjct: 177 DCVARGYTAIKFDPAGPYTMRGGHMPAMTDISQSVAFCKAIRAAVGDKADLLFGTHGQFT 236
Query: 260 SEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDV 319
+ A+ + + P+ +E+P+ D + ++ AR I V E + +
Sbjct: 237 TAGAIRLGNAIAPYS--PLWYEEPIPPD---AVEQMAAVAR-AVPIPVATGERLTTKAEF 290
Query: 320 QKVMQENLASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMIETRLATGFA-----LH 374
V++ A+++ L + G I +A + + + + + I L G +H
Sbjct: 291 APVLRSGAAAILQPALGRVG-----GIWEAKKIAAMAEVYNAQIAPHLYAGPVEWAANIH 345
Query: 375 LAAGLGCIKYVN-LNTPF--------LLSEDPFVG-------GCEVSGAIYNFTNARGQG 418
LAA + I + TPF + ED F+ G EV A+ G G
Sbjct: 346 LAASIPNILMCECIETPFHDQLIKSTIKVEDGFITAPTAAGLGLEVDEALARAHPYTGNG 405
Query: 419 GFLKWTIVSCTQVD 432
L+ C V+
Sbjct: 406 LHLEMQEAPCDYVN 419
>pdb|4IT1|A Chain A, Crystal Structure Of Enolase Pfl01_3283 (target
Efi-502286) From Pseudomonas Fluorescens Pf0-1 With
Bound Magnesium, Potassium And Tartrate
pdb|4IT1|B Chain B, Crystal Structure Of Enolase Pfl01_3283 (target
Efi-502286) From Pseudomonas Fluorescens Pf0-1 With
Bound Magnesium, Potassium And Tartrate
pdb|4IT1|C Chain C, Crystal Structure Of Enolase Pfl01_3283 (target
Efi-502286) From Pseudomonas Fluorescens Pf0-1 With
Bound Magnesium, Potassium And Tartrate
pdb|4IT1|D Chain D, Crystal Structure Of Enolase Pfl01_3283 (target
Efi-502286) From Pseudomonas Fluorescens Pf0-1 With
Bound Magnesium, Potassium And Tartrate
Length = 446
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 110/297 (37%), Gaps = 71/297 (23%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIARI--- 154
I +E NG +G GE GD ++ + Q + P F L+++ RI
Sbjct: 56 IEIESDNGYIGLGES------YGDAPALAIQQQVQSQLIGLDP-----FNLNQLRRIVQT 104
Query: 155 ---------LPGSEFA----------SVRAGVEMALIDAVANSIDIPLWRLFGGA----- 190
L G+E A + + E+A +D A +++PL L GGA
Sbjct: 105 TVAAHKPASLAGAELAPGSHASKAVSNAYSAFEVAFLDLQARYLNVPLVDLLGGAVRDEV 164
Query: 191 --SNSLSTAITIPAVSP----------------AEASELASKYCKLGFSTLKLNVGRNIT 232
S L SP A+A+ + Y GF ++KL G +
Sbjct: 165 PFSAYLFFKYAQHVDSPYKPDNWGEALNEQQIVAQAARMIEAY---GFKSIKLKAG-TLP 220
Query: 233 ADFDV--LQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWS 290
+ +V ++A+ P +D N ++ E ++ + L D + + D
Sbjct: 221 PEHEVACIKALKKAFPGYPLRIDPNGNWSLETSIRMAELLGD--------DLQYYEDPTP 272
Query: 291 GLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQII 347
GL ++ + T G+ + + ++ ++ + +N +V +G L Q +
Sbjct: 273 GLEGMAELHKRT-GLPLATNMVVTDFDEFRRSVAQNSVQIVLADHHYWGGLRDTQTL 328
>pdb|2QJM|A Chain A, Crystal Structure Of The K271e Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|2QJM|B Chain B, Crystal Structure Of The K271e Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|2QJM|C Chain C, Crystal Structure Of The K271e Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|2QJM|D Chain D, Crystal Structure Of The K271e Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
Length = 402
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGAS-NSLSTAITIPAVSPAEASELASKYCKLGFSTL 223
A V+MAL D A +PL++L GG S + + AE E Y +G+ +
Sbjct: 87 AAVDMALWDIKAKMAGMPLYQLLGGRSRDGIMVYGHANGSDIAETVEAVGHYIDMGYKAI 146
Query: 224 KLNVG 228
+ G
Sbjct: 147 RAQTG 151
>pdb|2QJJ|A Chain A, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans
pdb|2QJJ|B Chain B, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans
pdb|2QJJ|C Chain C, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans
pdb|2QJJ|D Chain D, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans
pdb|2QJN|A Chain A, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans Complexed With Mg And
2-Keto-3-Deoxy-D-Gluconate
pdb|2QJN|B Chain B, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans Complexed With Mg And
2-Keto-3-Deoxy-D-Gluconate
pdb|2QJN|C Chain C, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans Complexed With Mg And
2-Keto-3-Deoxy-D-Gluconate
pdb|2QJN|D Chain D, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans Complexed With Mg And
2-Keto-3-Deoxy-D-Gluconate
Length = 402
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGAS-NSLSTAITIPAVSPAEASELASKYCKLGFSTL 223
A V+MAL D A +PL++L GG S + + AE E Y +G+ +
Sbjct: 87 AAVDMALWDIKAKMAGMPLYQLLGGRSRDGIMVYGHANGSDIAETVEAVGHYIDMGYKAI 146
Query: 224 KLNVG 228
+ G
Sbjct: 147 RAQTG 151
>pdb|3R4E|A Chain A, Crystal Structure Of The A314p Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|3R4E|B Chain B, Crystal Structure Of The A314p Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|3R4E|C Chain C, Crystal Structure Of The A314p Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|3R4E|D Chain D, Crystal Structure Of The A314p Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
Length = 418
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGAS-NSLSTAITIPAVSPAEASELASKYCKLGFSTL 223
A V+MAL D A +PL++L GG S + + AE E Y +G+ +
Sbjct: 103 AAVDMALWDIKAKMAGMPLYQLLGGRSRDGIMVYGHANGSDIAETVEAVGHYIDMGYKAI 162
Query: 224 KLNVG 228
+ G
Sbjct: 163 RAQTG 167
>pdb|4E4F|A Chain A, Crystal Structure Of Enolase Pc1_0802 (Target Efi-502240)
From Pectobacterium Carotovorum Subsp. Carotovorum Pc1
pdb|4E4F|B Chain B, Crystal Structure Of Enolase Pc1_0802 (Target Efi-502240)
From Pectobacterium Carotovorum Subsp. Carotovorum Pc1
pdb|4E4F|C Chain C, Crystal Structure Of Enolase Pc1_0802 (Target Efi-502240)
From Pectobacterium Carotovorum Subsp. Carotovorum Pc1
pdb|4E4F|D Chain D, Crystal Structure Of Enolase Pc1_0802 (Target Efi-502240)
From Pectobacterium Carotovorum Subsp. Carotovorum Pc1
Length = 426
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 162 SVRAGVEMALIDAVANSIDIPLWRLFGGASNS-LSTAITIPAVSPAEASELASKYCKLGF 220
S + V+MAL D A + ++PL++L GGAS + + S E + +K+ GF
Sbjct: 106 SAISAVDMALWDIKAKAANMPLYQLLGGASRTGVMVYCHTTGHSIDEVLDDYAKHRDQGF 165
Query: 221 STLKLNVG 228
+++ G
Sbjct: 166 KAIRVQCG 173
>pdb|3DFH|A Chain A, Crystal Structure Of Putative Mandelate Racemase MUCONATE
Lactonizing Enzyme From Vibrionales Bacterium Swat-3
pdb|3DFH|B Chain B, Crystal Structure Of Putative Mandelate Racemase MUCONATE
Lactonizing Enzyme From Vibrionales Bacterium Swat-3
pdb|3DFH|C Chain C, Crystal Structure Of Putative Mandelate Racemase MUCONATE
Lactonizing Enzyme From Vibrionales Bacterium Swat-3
Length = 394
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEA-SELASKYCKLGFSTL 223
+GV+MAL D A +PL +LFGG S T E +L + + G+ +
Sbjct: 93 SGVDMALWDIKAKLAGMPLHQLFGGKSRDAIPVYTHATSDTMEGIYDLVEGFLEKGYKHI 152
Query: 224 KLNVG 228
+ +G
Sbjct: 153 RCQLG 157
>pdb|3SBF|A Chain A, Crystal Structure Of The Mutant P311a Of Enolase
Superfamily Member From Vibrionales Bacterium Complexed
With Mg And D-Arabinonate
pdb|3SBF|B Chain B, Crystal Structure Of The Mutant P311a Of Enolase
Superfamily Member From Vibrionales Bacterium Complexed
With Mg And D-Arabinonate
pdb|3SBF|C Chain C, Crystal Structure Of The Mutant P311a Of Enolase
Superfamily Member From Vibrionales Bacterium Complexed
With Mg And D-Arabinonate
pdb|3SBF|D Chain D, Crystal Structure Of The Mutant P311a Of Enolase
Superfamily Member From Vibrionales Bacterium Complexed
With Mg And D-Arabinonate
Length = 401
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEA-SELASKYCKLGFSTL 223
+GV+MAL D A +PL +LFGG S T E +L + + G+ +
Sbjct: 93 SGVDMALWDIKAKLAGMPLHQLFGGKSRDAIPVYTHATSDTMEGIYDLVEGFLEKGYKHI 152
Query: 224 KLNVG 228
+ +G
Sbjct: 153 RCQLG 157
>pdb|3R25|A Chain A, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|B Chain B, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|C Chain C, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|D Chain D, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|E Chain E, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|F Chain F, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|G Chain G, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
pdb|3R25|H Chain H, Crystal Structure Of Enolase Superfamily Member From
Vibrionales Bacterium Complexed With Mg And Glycerol In
The Active Site
Length = 401
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEA-SELASKYCKLGFSTL 223
+GV+MAL D A +PL +LFGG S T E +L + + G+ +
Sbjct: 93 SGVDMALWDIKAKLAGMPLHQLFGGKSRDAIPVYTHATSDTMEGIYDLVEGFLEKGYKHI 152
Query: 224 KLNVG 228
+ +G
Sbjct: 153 RCQLG 157
>pdb|3MQT|A Chain A, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|B Chain B, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|C Chain C, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|D Chain D, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|E Chain E, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|F Chain F, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|G Chain G, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|H Chain H, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|I Chain I, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|J Chain J, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|K Chain K, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|L Chain L, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|M Chain M, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|N Chain N, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|O Chain O, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|P Chain P, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|Q Chain Q, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|R Chain R, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|S Chain S, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|T Chain T, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|U Chain U, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|V Chain V, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|W Chain W, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
pdb|3MQT|X Chain X, Crystal Structure Of A Mandelate RacemaseMUCONATE
LACTONIZING ENZYME From Shewanella Pealeana
Length = 394
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNS-LSTAITI-PAVSP-AEASELASKYCKL 218
+G++MAL D + +P ++L GGA + L+ T+ P+V+ A SE+ Y L
Sbjct: 103 SGIDMALYDLAGKQLGVPAYKLMGGAQKAQLTPYFTLYPSVAADATLSEIVEAYKPL 159
>pdb|3TJ4|A Chain A, Crystal Structure Of An Enolase From Agrobacterium
Tumefaciens (Efi Target Efi-502087) No Mg
pdb|3TJ4|B Chain B, Crystal Structure Of An Enolase From Agrobacterium
Tumefaciens (Efi Target Efi-502087) No Mg
pdb|4H19|A Chain A, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup, Target Efi-502087) From Agrobacterium
Tumefaciens, With Bound Mg And D- Ribonohydroxamate,
Ordered Loop
pdb|4H19|B Chain B, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup, Target Efi-502087) From Agrobacterium
Tumefaciens, With Bound Mg And D- Ribonohydroxamate,
Ordered Loop
pdb|4H19|C Chain C, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup, Target Efi-502087) From Agrobacterium
Tumefaciens, With Bound Mg And D- Ribonohydroxamate,
Ordered Loop
pdb|4H19|D Chain D, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup, Target Efi-502087) From Agrobacterium
Tumefaciens, With Bound Mg And D- Ribonohydroxamate,
Ordered Loop
pdb|4H19|E Chain E, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup, Target Efi-502087) From Agrobacterium
Tumefaciens, With Bound Mg And D- Ribonohydroxamate,
Ordered Loop
pdb|4H19|F Chain F, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup, Target Efi-502087) From Agrobacterium
Tumefaciens, With Bound Mg And D- Ribonohydroxamate,
Ordered Loop
pdb|4H19|G Chain G, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup, Target Efi-502087) From Agrobacterium
Tumefaciens, With Bound Mg And D- Ribonohydroxamate,
Ordered Loop
pdb|4H19|H Chain H, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup, Target Efi-502087) From Agrobacterium
Tumefaciens, With Bound Mg And D- Ribonohydroxamate,
Ordered Loop
pdb|4H19|I Chain I, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup, Target Efi-502087) From Agrobacterium
Tumefaciens, With Bound Mg And D- Ribonohydroxamate,
Ordered Loop
pdb|4H19|K Chain K, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup, Target Efi-502087) From Agrobacterium
Tumefaciens, With Bound Mg And D- Ribonohydroxamate,
Ordered Loop
pdb|4H19|L Chain L, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup, Target Efi-502087) From Agrobacterium
Tumefaciens, With Bound Mg And D- Ribonohydroxamate,
Ordered Loop
pdb|4H19|M Chain M, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup, Target Efi-502087) From Agrobacterium
Tumefaciens, With Bound Mg And D- Ribonohydroxamate,
Ordered Loop
pdb|4H19|N Chain N, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup, Target Efi-502087) From Agrobacterium
Tumefaciens, With Bound Mg And D- Ribonohydroxamate,
Ordered Loop
pdb|4H19|P Chain P, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup, Target Efi-502087) From Agrobacterium
Tumefaciens, With Bound Mg And D- Ribonohydroxamate,
Ordered Loop
pdb|4H19|J Chain J, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup, Target Efi-502087) From Agrobacterium
Tumefaciens, With Bound Mg And D- Ribonohydroxamate,
Ordered Loop
pdb|4H19|O Chain O, Crystal Structure Of An Enolase (Mandelate Racemase
Subgroup, Target Efi-502087) From Agrobacterium
Tumefaciens, With Bound Mg And D- Ribonohydroxamate,
Ordered Loop
Length = 372
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 70/188 (37%), Gaps = 25/188 (13%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNS-----------LSTAITIPAVSPAEASELAS 213
A V++AL D A +PLW GGA + LS + A A E
Sbjct: 108 AAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGSARAVE--- 164
Query: 214 KYCKLGFSTLKLNVGR-NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLN 271
+ GF+ LK+ VG + D L A+ V +D N +
Sbjct: 165 ---EDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAK 221
Query: 272 DMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVV 331
D+ + FE+P+ DD + + AR+T I + E +++ + + + V
Sbjct: 222 DLDI--YWFEEPLWYDD---VTSHARLARNT-SIPIALGEQLYTVDAFRSFIDAGAVAYV 275
Query: 332 NIKLAKFG 339
+ + G
Sbjct: 276 QPDVTRLG 283
>pdb|3Q88|A Chain A, Glucose-6-Phosphate Isomerase From Francisella Tularensis
Complexed With Ribose 1,5-Bisphosphate.
pdb|3Q7I|A Chain A, Glucose-6-Phosphate Isomerase From Francisella Tularensis
Complexed With 6-Phosphogluconic Acid
Length = 543
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 221 STLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAV 264
+ LK++ N+ AD +LQA+H V P + ++ A++ +++EE +
Sbjct: 168 TDLKVHFVSNVDAD-SLLQALHVVDPETTLLIIASKSFSTEETL 210
>pdb|2ONG|A Chain A, Crystal Structure Of Of Limonene Synthase With 2-
Fluorogeranyl Diphosphate (Fgpp).
pdb|2ONG|B Chain B, Crystal Structure Of Of Limonene Synthase With 2-
Fluorogeranyl Diphosphate (Fgpp).
pdb|2ONH|A Chain A, Crystal Structure Of Of Limonene Synthase With 2-
Fluorolinalyl Diphosphate(flpp)
pdb|2ONH|B Chain B, Crystal Structure Of Of Limonene Synthase With 2-
Fluorolinalyl Diphosphate(flpp)
Length = 543
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 120 GDQTKALVKVREACQFLRQSPPTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSI 179
D T+ L+++ EA FL TTL A + + L E GV+ L+ +A S+
Sbjct: 135 SDDTRGLLQLYEAS-FLLTEGETTLESAREFATKFL---EEKVNEGGVDGDLLTRIAYSL 190
Query: 180 DIPL-WRL 186
DIPL WR+
Sbjct: 191 DIPLHWRI 198
>pdb|4E6M|A Chain A, Crystal Structure Of Putative Dehydratase Protein From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
(Salmonella Typhimurium)
pdb|4E6M|B Chain B, Crystal Structure Of Putative Dehydratase Protein From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
(Salmonella Typhimurium)
pdb|4E6M|C Chain C, Crystal Structure Of Putative Dehydratase Protein From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
(Salmonella Typhimurium)
pdb|4E6M|D Chain D, Crystal Structure Of Putative Dehydratase Protein From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
(Salmonella Typhimurium)
pdb|4E6M|E Chain E, Crystal Structure Of Putative Dehydratase Protein From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
(Salmonella Typhimurium)
pdb|4E6M|F Chain F, Crystal Structure Of Putative Dehydratase Protein From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
(Salmonella Typhimurium)
pdb|4E6M|G Chain G, Crystal Structure Of Putative Dehydratase Protein From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
(Salmonella Typhimurium)
pdb|4E6M|H Chain H, Crystal Structure Of Putative Dehydratase Protein From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
(Salmonella Typhimurium)
Length = 423
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 96 VAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKV-REACQFLRQSPPTTLNFALDEIAR- 153
V IRV +G G GEV L G KA V + R+ + P + + R
Sbjct: 49 VLIRVNTDSGLSGIGEVG---LAYGAGAKAGVGIIRDLAPLIVGEDPLNIEKIWEFFFRK 105
Query: 154 ----ILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNS 193
+ G+ F + + +++AL D + +P+++L GG +N
Sbjct: 106 TFWGMGGGNVFYAGMSAIDIALWDIKGKYLGVPVYQLLGGKTNE 149
>pdb|2GL5|A Chain A, Crystal Structure Of Putative Dehydratase From Salmonella
Thyphimurium
pdb|2GL5|B Chain B, Crystal Structure Of Putative Dehydratase From Salmonella
Thyphimurium
Length = 410
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 96 VAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKV-REACQFLRQSPPTTLNFALDEIAR- 153
V IRV +G G GEV L G KA V + R+ + P + + R
Sbjct: 28 VLIRVNTDSGLSGIGEVG---LAYGAGAKAGVGIIRDLAPLIVGEDPLNIEKIWEFFFRK 84
Query: 154 ----ILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNS 193
+ G+ F + + +++AL D + +P+++L GG +N
Sbjct: 85 TFWGMGGGNVFYAGMSAIDIALWDIKGKYLGVPVYQLLGGKTNE 128
>pdb|3LJK|A Chain A, Glucose-6-Phosphate Isomerase From Francisella Tularensis.
pdb|3M5P|A Chain A, Glucose-6-Phosphate Isomerase From Francisella Tularensis
Complexed With Fructose-6-Phosphate
Length = 543
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 221 STLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAV 264
+ LK++ N+ AD +LQA+H V P + ++ A++ +++EE +
Sbjct: 168 TDLKVHFVSNVDAD-SLLQALHVVDPETTLLIIASKSFSTEETL 210
>pdb|4A3R|A Chain A, Crystal Structure Of Enolase From Bacillus Subtilis.
pdb|4A3R|B Chain B, Crystal Structure Of Enolase From Bacillus Subtilis.
pdb|4A3R|C Chain C, Crystal Structure Of Enolase From Bacillus Subtilis.
pdb|4A3R|D Chain D, Crystal Structure Of Enolase From Bacillus Subtilis
Length = 430
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 110 GEVAVVPLVTGDQTKALVK-VREACQFLRQS-PPTTLNF------ALDEIARILPGSEF- 160
GE V L GD+ + L K V A + + P L F A+D++ L G+E
Sbjct: 44 GEYEAVELRDGDKDRYLGKGVLTAVNNVNEIIAPELLGFDVTEQNAIDQLLIELDGTENK 103
Query: 161 ----ASVRAGVEMALIDAVANSIDIPLWRLFGG 189
A+ GV MA A A+ + IPL++ GG
Sbjct: 104 GKLGANAILGVSMACARAAADFLQIPLYQYLGG 136
>pdb|2O56|A Chain A, Crystal Structure Of A Member Of The Enolase Superfamily
From Salmonella Typhimurium
pdb|2O56|B Chain B, Crystal Structure Of A Member Of The Enolase Superfamily
From Salmonella Typhimurium
pdb|2O56|C Chain C, Crystal Structure Of A Member Of The Enolase Superfamily
From Salmonella Typhimurium
pdb|2O56|D Chain D, Crystal Structure Of A Member Of The Enolase Superfamily
From Salmonella Typhimurium
pdb|2O56|E Chain E, Crystal Structure Of A Member Of The Enolase Superfamily
From Salmonella Typhimurium
pdb|2O56|F Chain F, Crystal Structure Of A Member Of The Enolase Superfamily
From Salmonella Typhimurium
pdb|2O56|G Chain G, Crystal Structure Of A Member Of The Enolase Superfamily
From Salmonella Typhimurium
pdb|2O56|H Chain H, Crystal Structure Of A Member Of The Enolase Superfamily
From Salmonella Typhimurium
Length = 407
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 157 GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGAS 191
G F++ +G+++AL D + +PL+++ GG S
Sbjct: 92 GGIFSAAMSGIDIALWDIKGKAWGVPLYKMLGGKS 126
>pdb|3INP|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of
D-Ribulose-Phosphate 3- Epimerase From Francisella
Tularensis
Length = 246
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 367 LATGFALHLAAGLGCIKYV--NLNTPFLLSEDPFVGG 401
+ G AL+ A G+ C+KYV N++ ++S +P GG
Sbjct: 135 IQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFGG 171
>pdb|3BSM|A Chain A, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens
pdb|3BSM|B Chain B, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens
pdb|3BSM|C Chain C, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens
pdb|3BSM|D Chain D, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens
Length = 413
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNS-LSTAITIPAVSPAEASELASKYCKLGFSTL 223
A V+MAL D A + +PL++L GG S + T + + +++ +LG+ +
Sbjct: 89 AAVDMALWDIKAKAAGMPLYQLLGGKSRERVMTYAHCTGQTIEDCLGEVARHVELGYRAV 148
Query: 224 KLNVG 228
++ G
Sbjct: 149 RVQSG 153
>pdb|3OW1|A Chain A, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With Mg
pdb|3OW1|B Chain B, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With Mg
pdb|3OW1|C Chain C, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With Mg
pdb|3OW1|D Chain D, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With Mg
pdb|3OW1|E Chain E, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With Mg
pdb|3OW1|F Chain F, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With Mg
pdb|3OW1|G Chain G, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With Mg
pdb|3OW1|H Chain H, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With Mg
pdb|3P93|A Chain A, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With
Mg,D-Mannonate And 2-Keto-3-Deoxy-D- Gluconate
pdb|3P93|B Chain B, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With
Mg,D-Mannonate And 2-Keto-3-Deoxy-D- Gluconate
pdb|3P93|C Chain C, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With
Mg,D-Mannonate And 2-Keto-3-Deoxy-D- Gluconate
pdb|3P93|D Chain D, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With
Mg,D-Mannonate And 2-Keto-3-Deoxy-D- Gluconate
pdb|3P93|E Chain E, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With
Mg,D-Mannonate And 2-Keto-3-Deoxy-D- Gluconate
pdb|3P93|F Chain F, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With
Mg,D-Mannonate And 2-Keto-3-Deoxy-D- Gluconate
pdb|3P93|G Chain G, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With
Mg,D-Mannonate And 2-Keto-3-Deoxy-D- Gluconate
pdb|3P93|H Chain H, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With
Mg,D-Mannonate And 2-Keto-3-Deoxy-D- Gluconate
pdb|3PK7|A Chain A, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens With Mg And Glycerol Bound
In The Active Site
pdb|3PK7|B Chain B, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens With Mg And Glycerol Bound
In The Active Site
pdb|3PK7|C Chain C, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens With Mg And Glycerol Bound
In The Active Site
pdb|3PK7|D Chain D, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens With Mg And Glycerol Bound
In The Active Site
pdb|3PK7|E Chain E, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens With Mg And Glycerol Bound
In The Active Site
pdb|3PK7|F Chain F, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens With Mg And Glycerol Bound
In The Active Site
pdb|3PK7|G Chain G, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens With Mg And Glycerol Bound
In The Active Site
pdb|3PK7|H Chain H, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens With Mg And Glycerol Bound
In The Active Site
pdb|3QKE|A Chain A, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With Mg And
D-Gluconate
pdb|3QKE|B Chain B, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With Mg And
D-Gluconate
pdb|3QKE|C Chain C, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With Mg And
D-Gluconate
pdb|3QKE|D Chain D, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With Mg And
D-Gluconate
pdb|3QKE|E Chain E, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With Mg And
D-Gluconate
pdb|3QKE|F Chain F, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With Mg And
D-Gluconate
pdb|3QKE|G Chain G, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With Mg And
D-Gluconate
pdb|3QKE|H Chain H, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With Mg And
D-Gluconate
pdb|3RGT|A Chain A, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With
D-Arabinohydroxamate
pdb|3RGT|B Chain B, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With
D-Arabinohydroxamate
pdb|3RGT|C Chain C, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With
D-Arabinohydroxamate
pdb|3RGT|D Chain D, Crystal Structure Of D-Mannonate Dehydratase From
Chromohalobacter Salexigens Complexed With
D-Arabinohydroxamate
Length = 405
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNS-LSTAITIPAVSPAEASELASKYCKLGFSTL 223
A V+MAL D A + +PL++L GG S + T + + +++ +LG+ +
Sbjct: 89 AAVDMALWDIKAKAAGMPLYQLLGGKSRERVMTYAHCTGQTIEDCLGEVARHVELGYRAV 148
Query: 224 KLNVG 228
++ G
Sbjct: 149 RVQSG 153
>pdb|3QKF|A Chain A, Crystal Structure Of The Mutant P317a Of D-Mannonate
Dehydratase From Chromohalobacter Salexigens Complexed
With Mg And D-Gluconate
pdb|3QKF|B Chain B, Crystal Structure Of The Mutant P317a Of D-Mannonate
Dehydratase From Chromohalobacter Salexigens Complexed
With Mg And D-Gluconate
pdb|3QKF|C Chain C, Crystal Structure Of The Mutant P317a Of D-Mannonate
Dehydratase From Chromohalobacter Salexigens Complexed
With Mg And D-Gluconate
pdb|3QKF|D Chain D, Crystal Structure Of The Mutant P317a Of D-Mannonate
Dehydratase From Chromohalobacter Salexigens Complexed
With Mg And D-Gluconate
pdb|3QKF|E Chain E, Crystal Structure Of The Mutant P317a Of D-Mannonate
Dehydratase From Chromohalobacter Salexigens Complexed
With Mg And D-Gluconate
pdb|3QKF|F Chain F, Crystal Structure Of The Mutant P317a Of D-Mannonate
Dehydratase From Chromohalobacter Salexigens Complexed
With Mg And D-Gluconate
pdb|3QKF|G Chain G, Crystal Structure Of The Mutant P317a Of D-Mannonate
Dehydratase From Chromohalobacter Salexigens Complexed
With Mg And D-Gluconate
pdb|3QKF|H Chain H, Crystal Structure Of The Mutant P317a Of D-Mannonate
Dehydratase From Chromohalobacter Salexigens Complexed
With Mg And D-Gluconate
Length = 405
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNS-LSTAITIPAVSPAEASELASKYCKLGFSTL 223
A V+MAL D A + +PL++L GG S + T + + +++ +LG+ +
Sbjct: 89 AAVDMALWDIKAKAAGMPLYQLLGGKSRERVMTYAHCTGQTIEDCLGEVARHVELGYRAV 148
Query: 224 KLNVG 228
++ G
Sbjct: 149 RVQSG 153
>pdb|4F4R|A Chain A, Crystal Structure Of D-Mannonate Dehydratase Homolog From
Chromohalobacter Salexigens (Target Efi-502114), With
Bound Na, Ordered Loop
Length = 426
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 165 AGVEMALIDAVANSIDIPLWRLFGGASNS-LSTAITIPAVSPAEASELASKYCKLGFSTL 223
A V+MAL D A + +PL++L GG S + T + + +++ +LG+ +
Sbjct: 110 AAVDMALWDIKAKAAGMPLYQLLGGKSRERVMTYAHCTGQTIEDCLGEVARHVELGYRAV 169
Query: 224 KLNVG 228
++ G
Sbjct: 170 RVQSG 174
>pdb|3P0W|A Chain A, Crystal Structure Of D-Glucarate Dehydratase From
Ralstonia Solanacearum Complexed With Mg And D-Glucarate
pdb|3P0W|B Chain B, Crystal Structure Of D-Glucarate Dehydratase From
Ralstonia Solanacearum Complexed With Mg And D-Glucarate
pdb|3P0W|C Chain C, Crystal Structure Of D-Glucarate Dehydratase From
Ralstonia Solanacearum Complexed With Mg And D-Glucarate
pdb|3P0W|D Chain D, Crystal Structure Of D-Glucarate Dehydratase From
Ralstonia Solanacearum Complexed With Mg And D-Glucarate
Length = 470
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 217 KLGFSTLKLNVGRNITAD-FDVLQAIHAVHPHCSFILDANEGYTSEEAV 264
+ GF+ KL G A+ + + AI A PH LD N ++ EA+
Sbjct: 214 RYGFADFKLKGGVMPGAEEMEAIAAIKARFPHARVTLDPNGAWSLNEAI 262
>pdb|3V5O|A Chain A, Structural And Mechanistic Studies Of Catalysis And Sulfa
Drug Resistance In Dihydropteroate Synthase
pdb|3V5O|B Chain B, Structural And Mechanistic Studies Of Catalysis And Sulfa
Drug Resistance In Dihydropteroate Synthase
Length = 297
Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 13/115 (11%)
Query: 276 IPVLFEQPVHRDDWSGLHDVSNFARDTY-GISVVADESCRSLNDV-------QKVMQENL 327
+P++ +RD+ + + +++ D Y I + D R N + K ++NL
Sbjct: 160 VPIILMH--NRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILNPGIGFAKTPEQNL 217
Query: 328 ASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMIETRL-ATGFALHLAAGLGC 381
++ N L + VLG ++ +RKS + ++D +E RL TG + L GC
Sbjct: 218 EAMRN--LEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGC 270
>pdb|1TWS|A Chain A, Dihydropteroate Synthetase From Bacillus Anthracis
pdb|1TWS|B Chain B, Dihydropteroate Synthetase From Bacillus Anthracis
pdb|1TWW|A Chain A, Dihydropteroate Synthetase, With Bound Substrate Analogue
Ptpp, From Bacillus Anthracis
pdb|1TWW|B Chain B, Dihydropteroate Synthetase, With Bound Substrate Analogue
Ptpp, From Bacillus Anthracis
pdb|1TWZ|A Chain A, Dihydropteroate Synthetase, With Bound Substrate Analogue
Ptp, From Bacillus Anthracis
pdb|1TWZ|B Chain B, Dihydropteroate Synthetase, With Bound Substrate Analogue
Ptp, From Bacillus Anthracis
pdb|1TX0|A Chain A, Dihydropteroate Synthetase, With Bound Product Analogue
Pteroic Acid, From Bacillus Anthracis
pdb|1TX0|B Chain B, Dihydropteroate Synthetase, With Bound Product Analogue
Pteroic Acid, From Bacillus Anthracis
pdb|1TX2|A Chain A, Dihydropteroate Synthetase, With Bound Inhibitor Manic,
From Bacillus Anthracis
pdb|1TX2|B Chain B, Dihydropteroate Synthetase, With Bound Inhibitor Manic,
From Bacillus Anthracis
pdb|3H21|A Chain A, Structural Studies Of Pterin-Based Inhibitors Of
Dihydropteroate Synthase
pdb|3H21|B Chain B, Structural Studies Of Pterin-Based Inhibitors Of
Dihydropteroate Synthase
pdb|3H22|A Chain A, Structural Studies Of Pterin-Based Inhibitors Of
Dihydropteroate Synthase
pdb|3H22|B Chain B, Structural Studies Of Pterin-Based Inhibitors Of
Dihydropteroate Synthase
pdb|3H23|A Chain A, Structural Studies Of Pterin-based Inhibitors Of
Dihydropteroate Synthase
pdb|3H23|B Chain B, Structural Studies Of Pterin-based Inhibitors Of
Dihydropteroate Synthase
pdb|3H24|A Chain A, Structural Studies Of Pterin-Based Inhibitors Of
Dihydropteroate Synthase
pdb|3H24|B Chain B, Structural Studies Of Pterin-Based Inhibitors Of
Dihydropteroate Synthase
pdb|3H26|A Chain A, Structural Studies Of Pterin-based Inhibitors Of
Dihydropteroate Synthase
pdb|3H26|B Chain B, Structural Studies Of Pterin-based Inhibitors Of
Dihydropteroate Synthase
pdb|3H2A|A Chain A, Structural Studies Of Pterin-Based Inhibitors Of
Dihydropteroate Synthase
pdb|3H2A|B Chain B, Structural Studies Of Pterin-Based Inhibitors Of
Dihydropteroate Synthase
pdb|3H2C|A Chain A, Structural Studies Of Pterin-Based Inhibitors Of
Dihydropteroate Synthase
pdb|3H2C|B Chain B, Structural Studies Of Pterin-Based Inhibitors Of
Dihydropteroate Synthase
pdb|3H2E|A Chain A, Structural Studies Of Pterin-based Inhibitors Of
Dihydropteroate Synthase
pdb|3H2E|B Chain B, Structural Studies Of Pterin-based Inhibitors Of
Dihydropteroate Synthase
pdb|3H2F|A Chain A, Structural Studies Of Pterin-Based Inhibitors Of
Dihydropteroate Synthase
pdb|3H2F|B Chain B, Structural Studies Of Pterin-Based Inhibitors Of
Dihydropteroate Synthase
pdb|3H2M|A Chain A, Structural Studies Of Pterin-Based Inhibitors Of
Dihydropteroate Synthase
pdb|3H2M|B Chain B, Structural Studies Of Pterin-Based Inhibitors Of
Dihydropteroate Synthase
pdb|3H2N|A Chain A, Structural Studies Of Pterin-based Inhibitors Of
Dihydropteroate Synthase
pdb|3H2N|B Chain B, Structural Studies Of Pterin-based Inhibitors Of
Dihydropteroate Synthase
pdb|3H2O|A Chain A, Structural Studies Of Pterin-Based Inhibitors Of
Dihydropteroate Synthase
pdb|3H2O|B Chain B, Structural Studies Of Pterin-Based Inhibitors Of
Dihydropteroate Synthase
pdb|3TYA|A Chain A, Dihydropteroate Synthase In Complex With Product
pdb|3TYA|B Chain B, Dihydropteroate Synthase In Complex With Product
pdb|3TYB|A Chain A, Dihydropteroate Synthase In Complex With Phba And Dhp+
pdb|3TYB|B Chain B, Dihydropteroate Synthase In Complex With Phba And Dhp+
pdb|3TYC|A Chain A, Dihydropteroate Synthase In Complex With Dhp+
pdb|3TYC|B Chain B, Dihydropteroate Synthase In Complex With Dhp+
pdb|3TYD|A Chain A, Dihydropteroate Synthase In Complex With Ppi And Dhp+
pdb|3TYD|B Chain B, Dihydropteroate Synthase In Complex With Ppi And Dhp+
pdb|3TYE|A Chain A, Dihydropteroate Synthase In Complex With Dhp-Stz
pdb|3TYE|B Chain B, Dihydropteroate Synthase In Complex With Dhp-Stz
pdb|4D8Z|A Chain A, Crystal Structure Of B. Anthracis Dhps With Compound 24
pdb|4D8Z|B Chain B, Crystal Structure Of B. Anthracis Dhps With Compound 24
pdb|4D9P|A Chain A, Crystal Structure Of B. Anthracis Dhps With Compound 17
pdb|4D9P|B Chain B, Crystal Structure Of B. Anthracis Dhps With Compound 17
pdb|4DAI|A Chain A, Crystal Structure Of B. Anthracis Dhps With Compound 23
pdb|4DAI|B Chain B, Crystal Structure Of B. Anthracis Dhps With Compound 23
pdb|4DB7|A Chain A, Crystal Structure Of B. Anthracis Dhps With Compound 25
pdb|4DB7|B Chain B, Crystal Structure Of B. Anthracis Dhps With Compound 25
pdb|4D8A|A Chain A, Crystal Structure Of B. Anthracis Dhps With Compound 21
pdb|4D8A|B Chain B, Crystal Structure Of B. Anthracis Dhps With Compound 21
pdb|4DAF|A Chain A, Crystal Structure Of B. Anthracis Dhps With Compound 19
pdb|4DAF|B Chain B, Crystal Structure Of B. Anthracis Dhps With Compound 19
Length = 297
Score = 28.1 bits (61), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 13/115 (11%)
Query: 276 IPVLFEQPVHRDDWSGLHDVSNFARDTY-GISVVADESCRSLNDV-------QKVMQENL 327
+P++ +RD+ + + +++ D Y I + D R N + K ++NL
Sbjct: 160 VPIILMH--NRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNL 217
Query: 328 ASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMIETRL-ATGFALHLAAGLGC 381
++ N L + VLG ++ +RKS + ++D +E RL TG + L GC
Sbjct: 218 EAMRN--LEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGC 270
>pdb|3NXL|A Chain A, Crystal Structure Of Glucarate Dehydratase From
Burkholderia Cepacia Complexed With Magnesium
pdb|3NXL|B Chain B, Crystal Structure Of Glucarate Dehydratase From
Burkholderia Cepacia Complexed With Magnesium
pdb|3NXL|C Chain C, Crystal Structure Of Glucarate Dehydratase From
Burkholderia Cepacia Complexed With Magnesium
pdb|3NXL|D Chain D, Crystal Structure Of Glucarate Dehydratase From
Burkholderia Cepacia Complexed With Magnesium
Length = 475
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 217 KLGFSTLKLNVGRNITAD-FDVLQAIHAVHPHCSFILDANEGYTSEEAV 264
+ GF+ KL G AD + + AI A P LD N ++ +EAV
Sbjct: 218 RYGFADFKLKGGVXAGADEXEAIAAIKACFPDARATLDPNGAWSLDEAV 266
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,482,931
Number of Sequences: 62578
Number of extensions: 428297
Number of successful extensions: 1176
Number of sequences better than 100.0: 138
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 1041
Number of HSP's gapped (non-prelim): 149
length of query: 438
length of database: 14,973,337
effective HSP length: 102
effective length of query: 336
effective length of database: 8,590,381
effective search space: 2886368016
effective search space used: 2886368016
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)