BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013681
(438 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O34508|AEEP_BACSU L-Ala-D/L-Glu epimerase OS=Bacillus subtilis (strain 168) GN=ykfB
PE=1 SV=1
Length = 366
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 181/358 (50%), Gaps = 17/358 (4%)
Query: 69 RAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVK 128
R E + V L+ P L +V E+V +R+ +G VGWGE ++TGD ++
Sbjct: 5 RIETSRIAVPLTKPFKTALRTVYTAESVIVRITYDSGAVGWGEAPPTLVITGD---SMDS 61
Query: 129 VREACQFLRQSPPTTLNFA-----LDEIARILPGSEFASVRAGVEMALIDAVANSIDIPL 183
+ A + + + A L +I +L G+ S +A VEMAL D A +PL
Sbjct: 62 IESAIHHVLKPALLGKSLAGYEAILHDIQHLLTGN--MSAKAAVEMALYDGWAQMCGLPL 119
Query: 184 WRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGR-NITADFDVLQAIH 242
+++ GG ++L T T+ SP E + A Y K GF TLK+ VG+ +I D +Q I
Sbjct: 120 YQMLGGYRDTLETDYTVSVNSPEEMAADAENYLKQGFQTLKIKVGKDDIATDIARIQEIR 179
Query: 243 A-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARD 301
V LDAN+G+ +EAV + K+ D G+ L EQPVH+DD +GL V++ A D
Sbjct: 180 KRVGSAVKLRLDANQGWRPKEAVTAIRKMEDAGLGIELVEQPVHKDDLAGLKKVTD-ATD 238
Query: 302 TYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQIIKATRKS-GLHLMID 360
T ++ADES + +V+Q A ++NIKL K G + + I A ++ G+ M+
Sbjct: 239 T---PIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMVG 295
Query: 361 GMIETRLATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQG 418
MIET+L A H AA I + + P +L D F GG SG+ + G G
Sbjct: 296 SMIETKLGITAAAHFAASKRNITRFDFDAPLMLKTDVFNGGITYSGSTISMPGKPGLG 353
>sp|Q9WXM1|AEEP_THEMA L-Ala-D/L-Glu epimerase OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=TM_0006 PE=1 SV=1
Length = 345
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 169/336 (50%), Gaps = 15/336 (4%)
Query: 73 RELNVALS-------APLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKA 125
R +NV LS P + S NV + + L +G G+GE + V G++ +A
Sbjct: 3 RIVNVKLSLKRYEYEKPFHITGSVSSESRNVEVEIVLESGVKGYGEASPSFRVNGERVEA 62
Query: 126 LVKVREACQFLRQSPPTTLNFA-LDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLW 184
L+ + A + + + N+A + EI L G F S++A V+ A +DA++ + +
Sbjct: 63 LLAIENAVREM-ITGIDVRNYARIFEITDRLFG--FPSLKAAVQFATLDALSQELGTQVC 119
Query: 185 RLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAV 244
L GG + + T T+ + + A K + GF +K+ VG N+ D + ++ I V
Sbjct: 120 YLLGGKRDEIETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAVEEIAKV 179
Query: 245 HPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYG 304
+I+DAN GYT +EAVE + G+ ++EQPV R+D GL F R
Sbjct: 180 TRGAKYIVDANMGYTQKEAVEFARAVYQKGIDIAVYEQPVRREDIEGL----KFVRFHSP 235
Query: 305 ISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMIE 364
V ADES R+ DV ++++E VNIKL K G+ L I++ SGL LMI M E
Sbjct: 236 FPVAADESARTKFDVMRLVKEEAVDYVNIKLMKSGISDALAIVEIAESSGLKLMIGCMGE 295
Query: 365 TRLATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVG 400
+ L ++H A G G ++ +L++ +L E+ F G
Sbjct: 296 SSLGINQSVHFALGTGAFEFHDLDSHLMLKEEVFRG 331
>sp|Q97MK4|AEEP_CLOAB L-Ala-D/L-Glu epimerase OS=Clostridium acetobutylicum (strain ATCC
824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=CA_C0192 PE=1 SV=1
Length = 358
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 175/346 (50%), Gaps = 21/346 (6%)
Query: 75 LNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQ 134
L+V L P + SV +V +V +++ G VG+G A LVTGD T+++
Sbjct: 11 LSVPLKKPFKTAVRSVNSVNDVVVKIITDTGNVGFGSAASTGLVTGDITESIEGA--INN 68
Query: 135 FLRQSPPTTLNFALDEIARILPGSEF-----ASVRAGVEMALIDAVANSIDIPLWRLFGG 189
++++S + +++ IL + S +A V++AL D PL++L GG
Sbjct: 69 YIKRS---IVGMDIEDFEAILIKLDNCIVGNTSAKAAVDIALYDLYGQRYGAPLYKLLGG 125
Query: 190 ASNSLSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIH-AVHPHC 248
N L T ITI SP E S + KLG+ TLK+ VG+N D ++ I A+
Sbjct: 126 FRNKLETDITISVNSPEEMSRDSVDAVKLGYKTLKIKVGKNPKLDIKRMREIRKAIGYEV 185
Query: 249 SFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVV 308
+ +DAN+G+ +EA+ L ++ + G+ L EQPV + GL V+ D I V+
Sbjct: 186 NLRIDANQGWQPKEAIRALNEIENEGLKIELVEQPVKAWNLEGLKMVT----DNVNIPVM 241
Query: 309 ADESCRSLNDVQKVMQENLASVVNIKLAKF-GVLGTLQIIKATRKSGLHLMIDGMIETRL 367
ADES S D +VM+ ++NIKL K G+ L+I G+ M+ M+E ++
Sbjct: 242 ADESVFSPKDAARVMEMRACDLINIKLMKTGGIHNALKICALAEVYGMECMLGCMLEGKV 301
Query: 368 ATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTN 413
+ A+HLAA I ++L+ P L S D VG GA+Y+ +N
Sbjct: 302 SVTAAVHLAAAKRIITKIDLDGPVLCSRDDVVG-----GAMYDNSN 342
>sp|O33949|CATB2_ACILW Muconate cycloisomerase 1-2 OS=Acinetobacter lwoffii GN=catB2 PE=3
SV=2
Length = 385
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 163/383 (42%), Gaps = 20/383 (5%)
Query: 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVP-LVTGDQT 123
V ++ E ++V P L ++++ V +R+ ++G VG GE + L G+++
Sbjct: 6 VKIESVETILVDVPTIRPHRLSVATMNCQTLVLVRIRCADGVVGVGEGTTIGGLAYGEES 65
Query: 124 KALVKVREACQF---LRQSPPTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSID 180
+KV F L+ T A+ + + G+ FA R+ VE AL DA A +
Sbjct: 66 PESIKVNIDTYFAPLLKGLDATRPGAAMATLRGLFQGNRFA--RSAVETALFDAQAQRLG 123
Query: 181 IPLWRLFGGA-SNSLSTAITIPAVSPAEASELASK-YCKLGFSTLKLNVGRNITADFDVL 238
+PL LFGG +S+ A T+ + + A + + KL +G AD DV
Sbjct: 124 VPLSELFGGRIRDSVDVAWTLASGDTTRDIDEAERVFEAKRHRVFKLKIGSRALAD-DVA 182
Query: 239 QAI---HAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDV 295
+ A+ +D N+ +T EA+ + D V L EQP+ ++ +GL +
Sbjct: 183 HVVAIQKALQGRGEVRVDVNQAWTESEAIWAGKRFADASV--ALIEQPIAAENRAGLKRL 240
Query: 296 SNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVL-GTLQIIKATRKSG 354
++ A+ + ++ADE+ D + A V +K+A+ G L G + +
Sbjct: 241 TDLAQ----VPIMADEALHGPADAFALASARAADVFAVKIAQSGGLSGAANVAAIALAAN 296
Query: 355 LHLMIDGMIETRLATGFALHLAAGLGCIKY-VNLNTPFLLSEDPFVGGCEVSGAIYNFTN 413
+ L M+E + T + L + G +K+ L P LL+E+ + +
Sbjct: 297 IDLYGGTMLEGAVGTIASAQLFSTFGELKWGTELFGPLLLTEEILTEPLRYENFVLHLPQ 356
Query: 414 ARGQGGFLKWTIVSCTQVDCCHG 436
G G L W + + D G
Sbjct: 357 GPGLGITLDWDKIDRLRRDTRKG 379
>sp|P42428|TFDD2_CUPPJ Chloromuconate cycloisomerase OS=Cupriavidus pinatubonensis (strain
JMP134 / LMG 1197) GN=tfdDII PE=3 SV=2
Length = 372
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 148/331 (44%), Gaps = 33/331 (9%)
Query: 95 NVAIRVELSNGCVGWGEVAVV--PLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIA 152
+V IR+ G VG GE P +GD +A+ +A +P ALD +
Sbjct: 23 SVLIRLHTKGGIVGIGESITPCGPWWSGDSVEAI----QATINHYLAPLVVGEPALDA-S 77
Query: 153 RILP-------GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVS 204
RI+ G+ FA +AG+EMAL+DAV +D P+ L GG + LS A +
Sbjct: 78 RIMAKLHGRVAGNAFA--KAGIEMALLDAVGKIVDAPIHVLLGGRFRDRLSVAWPLATGD 135
Query: 205 PAEASELASKYCKLGFS-TLKLNVGR-NITADFDVLQAI-HAVHPHCSFILDANEGYTSE 261
+ + A + + G + KL +G + D AI + S +D NE +
Sbjct: 136 VNQEVDEAFRMLEAGKAGAFKLKMGALPLAQDLRRALAIAKELEGKASLRVDPNEAWDEP 195
Query: 262 EAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQK 321
+ L L GV + EQPV R + + + AR ++ DE +SL+D +
Sbjct: 196 TTMRALAPLEAAGV--EIIEQPVARWNLDAMARIHRQARSM----LLIDEGVQSLHDASE 249
Query: 322 VMQENLASVVNIKLAKFGVLGTLQ-IIKATRKSGLHLMIDGMIETRLATGFALHLAAGLG 380
V++ A +V++K+ K G + + + G+H+ + +ET + T + LAA +
Sbjct: 250 VVKRAAAGLVSLKIMKTGGMRPARAMADIANAGGMHVYMGTFLETSIGTAANMQLAASIE 309
Query: 381 CIKY-VNLNTPFLLSEDPFVGGCEVSGAIYN 410
+ Y + P L+ ED CEV A+Y
Sbjct: 310 SLPYGGEVIGPLLIEEDL----CEVP-AVYK 335
>sp|P08310|CATB_PSEPU Muconate cycloisomerase 1 OS=Pseudomonas putida GN=catB PE=1 SV=4
Length = 375
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 24/328 (7%)
Query: 82 PLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVP-LVTGDQTKALVKVREACQF---LR 137
P L + +++ V IRV S+G G GE + L G ++ +K L
Sbjct: 23 PHKLAMHTMQTQTLVLIRVRCSDGVEGIGEATTIGGLAYGYESPEGIKANIDAHLAPALV 82
Query: 138 QSPPTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLST 196
P +N A+ ++ ++ G+ FA ++G+E AL+DA + +P+ L GG +SL
Sbjct: 83 GLPADNINAAMLKLDKLAKGNTFA--KSGIESALLDAQGKRLGLPVSELLGGRVRDSLEV 140
Query: 197 AITIPAVSPAEASELASKYCKLG-FSTLKLNVGRN-ITADFDVLQAI-HAVHPHCSFILD 253
A T+ + A A ++ KL +G N + D + AI + S +D
Sbjct: 141 AWTLASGDTARDIAEAQHMLEIRRHRVFKLKIGANPLAQDLKHVVAIKRELGDSASVRVD 200
Query: 254 ANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESC 313
N+ + +A+ L D G+ L EQP+ R + SG ++ + ++ADES
Sbjct: 201 VNQYWDESQAIRACQVLGDNGI--DLIEQPISRINRSGQVRLNQRS----PAPIMADESI 254
Query: 314 RSLNDVQKVMQENLASVVNIKLAKFG----VLGTLQIIKATRKSGLHLMIDGMIETRLAT 369
S+ D + + AS+ +K+AK G VL T QI +A +G+ L M+E + T
Sbjct: 255 ESVEDAFSLAADGAASIFALKIAKNGGPRAVLRTAQIAEA---AGIALYGGTMLEGSIGT 311
Query: 370 GFALHLAAGLGCIKY-VNLNTPFLLSED 396
+ H L + + L P LL+E+
Sbjct: 312 LASAHAFLTLRQLTWGTELFGPLLLTEE 339
>sp|Q43931|CATB_ACIAD Muconate cycloisomerase 1 OS=Acinetobacter sp. (strain ADP1)
GN=catB PE=3 SV=2
Length = 370
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 154/325 (47%), Gaps = 19/325 (5%)
Query: 82 PLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV-PLVTGDQTKALVKVREACQF----L 136
P L +++++ V I++ +G VGWGE + L G+++ VK F L
Sbjct: 17 PHKLSVTTMQTQTLVLIKIITEDGIVGWGEATTIGGLNYGEESPESVKANIDTYFKPLLL 76
Query: 137 RQSPPTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLS 195
P + L I + + G+ FA + ++ AL++ A +++P+ L GG + L
Sbjct: 77 SIKAPLNVAQTLKLIRKSINGNRFA--KCAIQTALLEIQAKRLNVPVSELLGGRIRDRLP 134
Query: 196 TAITIPAVSPAEASELASKYCKLG-FSTLKLNVGRN-ITADFDVLQAI-HAVHPHCSFIL 252
T+ + + A K +L +T KL +G N + D D + AI A+ P S +
Sbjct: 135 VLWTLASGDTDKDIAEAKKMIELKRHNTFKLKIGSNPLQHDVDHVIAIKKALGPEISVRV 194
Query: 253 DANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADES 312
D N ++ E V+ + +L D G+ L EQP ++ L ++ AR + ++++ADE
Sbjct: 195 DVNRAWSELECVKGIQQLQDGGI--DLIEQPCAIENTDALARLT--AR--FDVAIMADEV 248
Query: 313 CRSLNDVQKVMQENLASVVNIKLAKF-GVLGTLQIIKATRKSGLHLMIDGMIETRLATGF 371
+ ++ +++ A V +K+ + G++ ++ K R +G+ L M+E + +
Sbjct: 249 LTGPDSAYRIAKKSGADVFAVKVEQSGGLIEACEVAKIARLAGISLYGGTMLEGPVGSIA 308
Query: 372 ALHLAAGLGCIKY-VNLNTPFLLSE 395
+ H + +++ L P LL++
Sbjct: 309 SAHAFSTFETLEFGTELFGPLLLTQ 333
>sp|P51981|AEEP_ECOLI L-Ala-D/L-Glu epimerase OS=Escherichia coli (strain K12) GN=ycjG
PE=1 SV=2
Length = 321
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 20/265 (7%)
Query: 134 QFLRQSPPTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFG-GASN 192
Q + P +E+ +ILP + R ++ AL D A L L G
Sbjct: 61 QIMSVVPQLEKGLTREELQKILPA---GAARNALDCALWDLAARRQQQSLADLIGITLPE 117
Query: 193 SLSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFIL 252
++ TA T+ +P + + AS + G LK+ + ++ ++ V AI P + I+
Sbjct: 118 TVITAQTVVIGTPDQMANSASTLWQAGAKLLKVKLDNHLISERMV--AIRTAVPDATLIV 175
Query: 253 DANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADES 312
DANE + +E L D+GV + EQP+ D + L NF + + + ADES
Sbjct: 176 DANESWRAEGLAARCQLLADLGV--AMLEQPLPAQDDAALE---NF---IHPLPICADES 227
Query: 313 CRSLNDVQKVMQENLASVVNIKLAKFGVLG-TLQIIKATRKSGLHLMIDGMIETRLATGF 371
C + ++++ + + +VNIKL K G L L + R G LM+ M+ T A
Sbjct: 228 CHTRSNLKAL--KGRYEMVNIKLDKTGGLTEALALATEARAQGFSLMLGCMLCTSRAISA 285
Query: 372 ALHLAAGLGCIKYVNLNTPFLLSED 396
AL L + + +L+ P L+ D
Sbjct: 286 ALPLVPQ---VSFADLDGPTWLAVD 307
>sp|P95608|CATB_RHOOP Muconate cycloisomerase 1 OS=Rhodococcus opacus GN=catB PE=1 SV=1
Length = 373
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 141/338 (41%), Gaps = 30/338 (8%)
Query: 75 LNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV--PLVTGDQTKALVKVREA 132
L+V L P +S+ + + V + G G+GE V P G+ + + + E
Sbjct: 14 LDVPLVRPHKFATTSMTAQPLLLVAVTTAGGVTGYGEGVVPGGPWWGGESVETMQAIVE- 72
Query: 133 CQFLRQSPPTTLNFALDEIARILPGSE-------FASVRAGVEMALIDAVANSIDIPLWR 185
R P L +DEI I+P E FA +A V++AL DA A S+ +P+
Sbjct: 73 ----RYIVPVLLGRGVDEITGIMPDIERVVANARFA--KAAVDVALHDAWARSLGVPVHT 126
Query: 186 LFGGASNSLSTAITIPAVSPA-----EASELASKYCKLGFSTLKLNVGRNITADFDVLQA 240
L GGA +PA EA +L F LK+ V+Q
Sbjct: 127 LLGGAFRKSVDVTWALGAAPAEEIIEEALDLVESKRHFSFK-LKMGALDPAVDTARVVQI 185
Query: 241 IHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFAR 300
A+ +D N + A++ + +L + GV L EQP + L +++
Sbjct: 186 AQALQGKAGVRIDVNARWDRLTALKYVPRLVEGGV--ELIEQPTPGEQLEVLAELNRLVP 243
Query: 301 DTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVL-GTLQIIKATRKSGLHLMI 359
+ V+ADES ++ +D +V + A V+ +K K G L + +++ + +G+
Sbjct: 244 ----VPVMADESVQTPHDALEVARRGAADVIALKTTKCGGLQKSREVVAIAKAAGIACHG 299
Query: 360 DGMIETRLATGFALHLAAGLGCIKY-VNLNTPFLLSED 396
IE + T ++H A I + L P L SE+
Sbjct: 300 ATSIEGPIGTAASIHFACAEPGIDFGTELFGPLLFSEE 337
>sp|O34514|MENC_BACSU o-succinylbenzoate synthase OS=Bacillus subtilis (strain 168)
GN=menC PE=1 SV=1
Length = 371
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 142/319 (44%), Gaps = 19/319 (5%)
Query: 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV--PLVTGDQ 122
+++++ L++ L P + +++ + + + ++G GWGEV+ P T +
Sbjct: 2 IEIEKITLYHLSMNLKKPFKNSIETLQERKFLIVEAIDTSGVTGWGEVSAFSSPWYTEET 61
Query: 123 TKALVKVREACQFLRQSPPTTLNF---ALDEIARILPGSEFASVRAGVEMALIDAVANSI 179
+ + + F+ N D +AR G+ A +AG+E A+ D A
Sbjct: 62 IGTCLHMLKDF-FIPNVVGREFNHPSEVPDSLAR-YKGNRMA--KAGLESAVWDIYAKKK 117
Query: 180 DIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQ 239
+ L GG + + + + + + Y K G+ +K+ + D ++++
Sbjct: 118 GVSLAEALGGTRDKVPAGVVVGLAPLDDMLKEIESYQKEGYQRIKIKI--QPGQDVELVK 175
Query: 240 AIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFA 299
AI + P + DAN Y ++ + L +L+D ++ + EQP+ DD +
Sbjct: 176 AIRSRFPTIPLMADANSSYELKD-ISRLKELDDYHLM--MIEQPLQADDIVDHRHLQKHL 232
Query: 300 RDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLG-TLQIIKATRKSGLHLM 358
+ ++ DES S++D ++ ++ ++NIK ++ G L L+I ++ + +
Sbjct: 233 K----TAICLDESICSVDDARRAIELGSCKIINIKPSRVGGLTEALKIHDLCKEHHMQVW 288
Query: 359 IDGMIETRLATGFALHLAA 377
GM+ET ++ + LA+
Sbjct: 289 CGGMLETGISRAQNVALAS 307
>sp|Q9RNZ9|TFDD_DELAC Chloromuconate cycloisomerase OS=Delftia acidovorans GN=tfdD PE=1
SV=2
Length = 370
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 120/240 (50%), Gaps = 12/240 (5%)
Query: 162 SVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLG- 219
S +A +++AL D A ++++ + L GG S+ A T+ + A + A + +
Sbjct: 99 SAKAAIDIALHDLKARALNLSIADLIGGTMRKSIPIAWTLASGDTARDIDSALEMIEARR 158
Query: 220 FSTLKLNVG-RNITADFDVLQAI-HAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIP 277
+ K+ +G R D + +++I AV S +D N+G+ + A + +L + GV
Sbjct: 159 HNRFKVKLGARTPAQDLEHIRSIVKAVGDKASVRVDVNQGWDEQTASIWIPRLEEAGV-- 216
Query: 278 VLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAK 337
L EQPV R ++ L ++ + G++++ADES SL+ ++ ++ ++KL
Sbjct: 217 ELVEQPVPRANFGALRRLT----EQNGVAILADESLSSLSSAFELARDRAVDAFSLKLCN 272
Query: 338 F-GVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKY-VNLNTPFLLSE 395
G+ TL++ +G+ M+++ + T ALH+ A L + Y L P++LS+
Sbjct: 273 MGGIANTLKVAAIAEAAGISSYGGTMLDSTVGTAAALHVYATLPSLPYGCELIGPWVLSD 332
>sp|P83763|CBNB_CUPNE Chloromuconate cycloisomerase CbnB OS=Cupriavidus necator GN=cbnB
PE=3 SV=1
Length = 370
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 120/240 (50%), Gaps = 12/240 (5%)
Query: 162 SVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLG- 219
S +A +++AL D A ++++ + L GG S+ A T+ + A + A + +
Sbjct: 99 SAKAAIDIALHDLKARALNLSIADLIGGTMRKSIPIAWTLASGDTARDIDSALEMIEARR 158
Query: 220 FSTLKLNVG-RNITADFDVLQAI-HAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIP 277
+ K+ +G R D + +++I AV S +D N+G+ + A + +L + GV
Sbjct: 159 HNRFKVKLGARTPAQDLEHIRSIVKAVGDKASVRVDVNQGWDEQTASIWIPRLEEAGV-- 216
Query: 278 VLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAK 337
L EQPV R ++ L ++ + G++++ADES SL+ ++ ++ ++KL
Sbjct: 217 ELVEQPVPRANFGALRRLT----EQNGVAILADESLSSLSSAFELARDRAVDAFSLKLCN 272
Query: 338 F-GVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKY-VNLNTPFLLSE 395
G+ TL++ +G+ M+++ + T ALH+ A L + Y L P++LS+
Sbjct: 273 MGGIANTLKVAAIAEAAGISSYGGTMLDSTVGTAAALHVYATLPSLPYGCELIGPWVLSD 332
>sp|P27099|TCBD_PSESQ Chloromuconate cycloisomerase OS=Pseudomonas sp. (strain P51)
GN=tcbD PE=1 SV=1
Length = 370
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 120/240 (50%), Gaps = 12/240 (5%)
Query: 162 SVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLG- 219
S +A +++AL D A ++++ + L GG S+ A T+ + A + A + +
Sbjct: 99 SAKAAIDIALHDLKARALNLSIADLIGGTMRTSIPIAWTLASGDTARDIDSALEMIETRR 158
Query: 220 FSTLKLNVG-RNITADFDVLQAI-HAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIP 277
+ K+ +G R D + +++I AV S +D N+G+ + A + +L + GV
Sbjct: 159 HNRFKVKLGARTPAQDLEHIRSIVKAVGDRASVRVDVNQGWDEQTASIWIPRLEEAGV-- 216
Query: 278 VLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAK 337
L EQPV R ++ L ++ + G++++ADES SL+ ++ +++ ++KL
Sbjct: 217 ELVEQPVPRANFGALRRLT----EQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCN 272
Query: 338 F-GVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKY-VNLNTPFLLSE 395
G+ TL++ +G+ M+++ + T ALH+ A L + Y L P++L +
Sbjct: 273 MGGIANTLKVAAVAEAAGISSYGGTMLDSTVGTAAALHVYATLPSLPYGCELIGPWVLGD 332
>sp|P11452|CLCB_PSEPU Chloromuconate cycloisomerase OS=Pseudomonas putida GN=clcB PE=3
SV=2
Length = 370
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 149/331 (45%), Gaps = 19/331 (5%)
Query: 75 LNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV--PLVTGDQTKALVKVREA 132
++V S P+ + ++V+ +++ + G VG GE + V P + + + + + E
Sbjct: 11 VDVPASRPIQMSFTTVQKQSYAIVQIR-AGGLVGIGEGSSVGGPTWSSECAETIKVIIET 69
Query: 133 --CQFLRQSPPTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA 190
L T L + R + G+ S +A +++AL D A S+++PL L GGA
Sbjct: 70 YLAPLLIGKDATNLRELQHLMERAVTGN--YSAKAAIDVALHDLKARSLNLPLSDLIGGA 127
Query: 191 -SNSLSTAITIPAVSPAEASELASKYC-KLGFSTLKLNVGRNITAD--FDVLQAIHAVHP 246
+ A T+ + +A + + + K+ +G AD + + I V
Sbjct: 128 IQQGIPIAWTLASGDTQRDIAIAEEMIERRRHNRFKIKLGVRSPADDLRHIEKIIERVGD 187
Query: 247 HCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGIS 306
+ +D N+ + A + +L GV L EQPV R ++ L +S G++
Sbjct: 188 RAAVRVDINQAWDENTASVWIPRLEAAGV--ELVEQPVARSNFDALRRLSA----DNGVA 241
Query: 307 VVADESCRSLNDVQKVMQENLASVVNIKLAKF-GVLGTLQIIKATRKSGLHLMIDGMIET 365
++ADES SL ++ + + ++KL GV TL++ SG+ M+++
Sbjct: 242 ILADESLSSLASAFELARHHCVDAFSLKLCNMGGVANTLKVAAIAEASGIASYGGTMLDS 301
Query: 366 RLATGFALHLAAGLGCIKY-VNLNTPFLLSE 395
+ T ALH+ A L + + L P++L++
Sbjct: 302 SIGTAAALHVYATLPTMPFECELLGPWVLAD 332
>sp|P05404|TFDD1_CUPPJ Chloromuconate cycloisomerase OS=Cupriavidus pinatubonensis (strain
JMP134 / LMG 1197) GN=tfdDI PE=1 SV=4
Length = 370
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 36/266 (13%)
Query: 147 ALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIP----- 201
AL +AR + G+ AS +A VEMAL+D A ++ + + L GG L +AI I
Sbjct: 86 ALQTMARAVTGN--ASAKAAVEMALLDLKARALGVSIAELLGG---PLRSAIPIAWTLAS 140
Query: 202 ---------AVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAI-HAVHPHCSFI 251
AV E KLGF R+ D ++A+ +++
Sbjct: 141 GDTKRDLDSAVEMIERRRHNRFKVKLGF--------RSPQDDLIHMEALSNSLGSKAYLR 192
Query: 252 LDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADE 311
+D N+ + + A + +L +GV L EQPV R++ L +S+ R ++++ADE
Sbjct: 193 VDVNQAWDEQVASVYIPELEALGV--ELIEQPVGRENTQALRRLSDNNR----VAIMADE 246
Query: 312 SCRSLNDVQKVMQENLASVVNIKLAKF-GVLGTLQIIKATRKSGLHLMIDGMIETRLATG 370
S +L + ++ V ++KL GV T +I SG+ M+++ + T
Sbjct: 247 SLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDSTIGTS 306
Query: 371 FALHLAAGLGCIKY-VNLNTPFLLSE 395
AL L + + + + L PF+L++
Sbjct: 307 VALQLYSTVPSLPFGCELIGPFVLAD 332
>sp|Q15KI9|PHYLO_ARATH Protein PHYLLO, chloroplastic OS=Arabidopsis thaliana GN=PHYLLO PE=2
SV=2
Length = 1715
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 116/251 (46%), Gaps = 37/251 (14%)
Query: 94 ENVAIRVELSNGCVGWGEVAVVPLVTG--------DQTKALVKVREACQFLRQSP---PT 142
E + + L +G +G+GEVA PL + Q + ++ + +F P +
Sbjct: 1023 EGFILSLTLEDGSIGYGEVA--PLNSNVENLMDVEGQLQLVLHLMNEAKFSYMLPLLNGS 1080
Query: 143 TLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTA----I 198
++ E+ I S F SVR G+EMAL++A+A D L + +A +
Sbjct: 1081 ISSWIWSELG-ITASSIFPSVRCGLEMALLNAMAVRHDSSLLGILHYQKEENGSAQPHSV 1139
Query: 199 TIPAV-----SPAEASELASKYCKLGFSTLKLNVGRNITA--DFDVLQAI-HAVHPHCSF 250
I A+ +P E + +A K + GFS +KL VGR +++ D V+Q + AV
Sbjct: 1140 QICALLDSEGTPLEVAYVARKLVQEGFSAIKLKVGRRVSSVQDALVMQEVRRAVGVQIEL 1199
Query: 251 ILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVAD 310
DAN +T EEA E +N + + E+PV D D+ F +T G+ V D
Sbjct: 1200 RADANCRWTFEEAREFGLLVNSCNLKYI--EEPVQNKD-----DLIRFHEET-GLPVALD 1251
Query: 311 ESCRSLNDVQK 321
E +L+D ++
Sbjct: 1252 E---TLDDFEE 1259
>sp|A6TFZ4|DGOD_KLEP7 D-galactonate dehydratase OS=Klebsiella pneumoniae subsp.
pneumoniae (strain ATCC 700721 / MGH 78578) GN=dgoD PE=3
SV=1
Length = 382
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P +N + R
Sbjct: 18 LKIETDEGIVGWGE----PVIEGRARTVEAAVHEFGDYLIGQDPARINDLWQVMYRGGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PAE +
Sbjct: 74 RGGPIMMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPAEVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
K +GF T KLN
Sbjct: 134 KLRGIGFDTFKLN 146
>sp|A1WPC7|DGOD_VEREI D-galactonate dehydratase OS=Verminephrobacter eiseniae (strain
EF01-2) GN=dgoD PE=3 SV=1
Length = 382
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+R+E G +GWGE P+V G V E +L P +N + R
Sbjct: 18 LRIETDEGLIGWGE----PVVEGHARAVQAAVHELEPYLIGQDPARINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G+ F S AGV+ AL D ++ +P+++L GG + + T + PA+ +
Sbjct: 74 RGGAVFMSAIAGVDQALWDIKGKALGVPVYQLLGGLVRDRMRTYGWVGGDRPADVIDGIR 133
Query: 214 KYCKLGFSTLKLN 226
+ GF+ KLN
Sbjct: 134 QRVDAGFTHFKLN 146
>sp|Q8ZKZ1|DGOD_SALTY D-galactonate dehydratase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=dgoD PE=3 SV=1
Length = 382
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHEFADYLIGKDPARINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPIMMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIE 133
Query: 214 KYCKLGFSTLKLN 226
K +GF T KLN
Sbjct: 134 KLRGIGFDTFKLN 146
>sp|A9MWL9|DGOD_SALPB D-galactonate dehydratase OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=dgoD PE=3 SV=1
Length = 382
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHEFADYLIGKDPARINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPIMMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIE 133
Query: 214 KYCKLGFSTLKLN 226
K +GF T KLN
Sbjct: 134 KLRGIGFDTFKLN 146
>sp|B4SY97|DGOD_SALNS D-galactonate dehydratase OS=Salmonella newport (strain SL254)
GN=dgoD PE=3 SV=1
Length = 382
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHEFADYLIGKDPARINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPIMMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIE 133
Query: 214 KYCKLGFSTLKLN 226
K +GF T KLN
Sbjct: 134 KLRGIGFDTFKLN 146
>sp|B4TA81|DGOD_SALHS D-galactonate dehydratase OS=Salmonella heidelberg (strain SL476)
GN=dgoD PE=3 SV=1
Length = 382
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHEFADYLIGKDPARINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPIMMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIE 133
Query: 214 KYCKLGFSTLKLN 226
K +GF T KLN
Sbjct: 134 KLRGIGFDTFKLN 146
>sp|B5QUN9|DGOD_SALEP D-galactonate dehydratase OS=Salmonella enteritidis PT4 (strain
P125109) GN=dgoD PE=3 SV=1
Length = 382
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHEFADYLIGKDPARINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPIMMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIE 133
Query: 214 KYCKLGFSTLKLN 226
K +GF T KLN
Sbjct: 134 KLRGIGFDTFKLN 146
>sp|B5FN00|DGOD_SALDC D-galactonate dehydratase OS=Salmonella dublin (strain CT_02021853)
GN=dgoD PE=3 SV=1
Length = 382
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHEFADYLIGKDPARINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPIMMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIE 133
Query: 214 KYCKLGFSTLKLN 226
K +GF T KLN
Sbjct: 134 KLRGIGFDTFKLN 146
>sp|B5BIK9|DGOD_SALPK D-galactonate dehydratase OS=Salmonella paratyphi A (strain
AKU_12601) GN=dgoD PE=3 SV=1
Length = 382
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHEFADYLIGKDPARINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPIMMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIE 133
Query: 214 KYCKLGFSTLKLN 226
K +GF T KLN
Sbjct: 134 KLRGIGFDTFKLN 146
>sp|B5RFZ8|DGOD_SALG2 D-galactonate dehydratase OS=Salmonella gallinarum (strain 287/91 /
NCTC 13346) GN=dgoD PE=3 SV=1
Length = 382
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHEFADYLIGKDPARINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPIMMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIE 133
Query: 214 KYCKLGFSTLKLN 226
K +GF T KLN
Sbjct: 134 KLRGIGFDTFKLN 146
>sp|A4W4R9|DGOD_ENT38 D-galactonate dehydratase OS=Enterobacter sp. (strain 638) GN=dgoD
PE=3 SV=1
Length = 382
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E ++L P +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELKEYLIGQDPARINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PAE +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPAEVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
+GF T KLN
Sbjct: 134 TLRNIGFDTFKLN 146
>sp|P0CC06|Y4701_DICDI Enolase superfamily member DDB_G0284701 OS=Dictyostelium discoideum
GN=DDB_G0284701 PE=3 SV=1
Length = 437
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 109/244 (44%), Gaps = 35/244 (14%)
Query: 164 RAGVEMALIDAVANSIDIPLWRLFG-GASNSLSTAITIPAVSPA-----EASELASKYCK 217
R +EMAL+D + P+++L S SL ++ P ++++ SKY
Sbjct: 153 RCAIEMALLDGWGKFLKQPIYKLINIPESESLKPFYYTISMCPTMEEIMDSTDFGSKYT- 211
Query: 218 LGFSTLKLNVGRNITADFDVLQAIH-------AVHPHCSFILDANEGYTSEEAVEVLGKL 270
GF LK+ + ++ +++ ++ + +DAN +T A + L KL
Sbjct: 212 -GF--LKIKLDADVEKGMNIIDSVQKRLLNNNSTRTISKISVDANSSWTPSVARKYLEKL 268
Query: 271 NDMGVIPVLFEQP--------VHRDDWSGLHDVSNFA--RDTY---GISVVADESCRSLN 317
+ M + + EQP V++D + ++ + + Y G+ + ADES +
Sbjct: 269 SPMADLISMVEQPFPIETLKTVNKDQKIDIQHLNEWVSIKKEYQDKGLLIFADESICTEK 328
Query: 318 DVQKVMQENLASVVNIKLAKFGVL--GTLQIIKATRKSGLHLMIDGMIETRLATGFALHL 375
D+ ++Q L VNIKL K G + G ++KA ++ GL I M+ + L A HL
Sbjct: 329 DLDGLVQ--LVHGVNIKLEKTGGIRPGLSTLLKA-KELGLKTWIGSMVASSLNVSAAAHL 385
Query: 376 AAGL 379
L
Sbjct: 386 LCSL 389
>sp|B5XW18|DGOD_KLEP3 D-galactonate dehydratase OS=Klebsiella pneumoniae (strain 342)
GN=dgoD PE=3 SV=1
Length = 382
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P+V G V E +L P +N + R
Sbjct: 18 LKIETDEGIVGWGE----PIVEGRARTVEAAVHELGDYLIGQDPARINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D +++ P+W+L GG + + + PAE +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKALNAPVWQLLGGLVRDKIKAYSWVGGDRPAEVIAGIN 133
Query: 214 KYCKLGFSTLKLN 226
+GF T KLN
Sbjct: 134 TLRGMGFDTFKLN 146
>sp|A7MN07|DGOD_CROS8 D-galactonate dehydratase OS=Cronobacter sakazakii (strain ATCC
BAA-894) GN=dgoD PE=3 SV=1
Length = 382
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E ++L P +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELGEYLIGQDPARINDLWQVMYRGGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PAE
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPAEVIAGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLRQIGFDTFKLN 146
>sp|Q0TB15|DGOD_ECOL5 D-galactonate dehydratase OS=Escherichia coli O6:K15:H31 (strain
536 / UPEC) GN=dgoD PE=3 SV=1
Length = 382
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P+ +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELSDYLIGQDPSRINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLREIGFDTFKLN 146
>sp|A1AHM7|DGOD_ECOK1 D-galactonate dehydratase OS=Escherichia coli O1:K1 / APEC GN=dgoD
PE=3 SV=1
Length = 382
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P+ +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELSDYLIGQDPSRINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLREIGFDTFKLN 146
>sp|B7N1Z6|DGOD_ECO81 D-galactonate dehydratase OS=Escherichia coli O81 (strain ED1a)
GN=dgoD PE=3 SV=1
Length = 382
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P+ +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELSDYLIGQDPSRINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLREIGFDTFKLN 146
>sp|B7NQZ2|DGOD_ECO7I D-galactonate dehydratase OS=Escherichia coli O7:K1 (strain IAI39 /
ExPEC) GN=dgoD PE=3 SV=1
Length = 382
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P+ +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELSDYLIGQDPSRINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLREIGFDTFKLN 146
>sp|B7MGB3|DGOD_ECO45 D-galactonate dehydratase OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=dgoD PE=3 SV=1
Length = 382
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P+ +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELSDYLIGQDPSRINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLREIGFDTFKLN 146
>sp|B7LK34|DGOD_ESCF3 D-galactonate dehydratase OS=Escherichia fergusonii (strain ATCC
35469 / DSM 13698 / CDC 0568-73) GN=dgoD PE=3 SV=1
Length = 382
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P+ +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELSDYLIGQDPSRINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLREIGFDTFKLN 146
>sp|Q1R4P4|DGOD_ECOUT D-galactonate dehydratase OS=Escherichia coli (strain UTI89 / UPEC)
GN=dgoD PE=3 SV=1
Length = 382
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P+ +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELSDYLIGQDPSRINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLREIGFDTFKLN 146
>sp|Q6CYT9|DGOD_ERWCT D-galactonate dehydratase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=dgoD PE=3 SV=1
Length = 382
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P +N + R
Sbjct: 18 LKIETDEGIVGWGE----PVIEGRARTVEAAVHELSDYLIGQDPARINDIWQVLYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ +P+++L GG + + + P+E
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKALGVPVYQLLGGLVRDKIKAYSWVGGDRPSEVIAGIK 133
Query: 214 KYCKLGFSTLKLN 226
K ++GF T KLN
Sbjct: 134 KLTEIGFDTFKLN 146
>sp|B6I3S5|DGOD_ECOSE D-galactonate dehydratase OS=Escherichia coli (strain SE11) GN=dgoD
PE=3 SV=1
Length = 382
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P+ +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELGDYLIGQDPSRINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLREIGFDTFKLN 146
>sp|B7NF09|DGOD_ECOLU D-galactonate dehydratase OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=dgoD PE=3 SV=1
Length = 382
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P+ +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELGDYLIGQDPSRINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLREIGFDTFKLN 146
>sp|Q6BF17|DGOD_ECOLI D-galactonate dehydratase OS=Escherichia coli (strain K12) GN=dgoD
PE=1 SV=1
Length = 382
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P+ +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELGDYLIGQDPSRINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLREIGFDTFKLN 146
>sp|B1IYQ2|DGOD_ECOLC D-galactonate dehydratase OS=Escherichia coli (strain ATCC 8739 /
DSM 1576 / Crooks) GN=dgoD PE=3 SV=1
Length = 382
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P+ +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELGDYLIGQDPSRINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLREIGFDTFKLN 146
>sp|B1X9C1|DGOD_ECODH D-galactonate dehydratase OS=Escherichia coli (strain K12 / DH10B)
GN=dgoD PE=3 SV=1
Length = 382
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P+ +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELGDYLIGQDPSRINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLREIGFDTFKLN 146
>sp|C4ZYW9|DGOD_ECOBW D-galactonate dehydratase OS=Escherichia coli (strain K12 / MC4100
/ BW2952) GN=dgoD PE=3 SV=1
Length = 382
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P+ +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELGDYLIGQDPSRINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLREIGFDTFKLN 146
>sp|B7M4I1|DGOD_ECO8A D-galactonate dehydratase OS=Escherichia coli O8 (strain IAI1)
GN=dgoD PE=3 SV=1
Length = 382
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P+ +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELGDYLIGQDPSRINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLREIGFDTFKLN 146
>sp|B7L836|DGOD_ECO55 D-galactonate dehydratase OS=Escherichia coli (strain 55989 / EAEC)
GN=dgoD PE=3 SV=1
Length = 382
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P+ +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELGDYLIGQDPSRINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLREIGFDTFKLN 146
>sp|A7ZTP7|DGOD_ECO24 D-galactonate dehydratase OS=Escherichia coli O139:H28 (strain
E24377A / ETEC) GN=dgoD PE=3 SV=1
Length = 382
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P+ +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELGDYLIGQDPSRINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLREIGFDTFKLN 146
>sp|B1LL17|DGOD2_ECOSM D-galactonate dehydratase 2 OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=dgoD2 PE=3 SV=1
Length = 382
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +L P+ +N + R
Sbjct: 18 LKIETDEGVVGWGE----PVIEGRARTVEAAVHELGDYLIGQDPSRINDLWQVMYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ P+W+L GG + + + PA+ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWVGGDRPADVIDGIK 133
Query: 214 KYCKLGFSTLKLN 226
++GF T KLN
Sbjct: 134 TLREIGFDTFKLN 146
>sp|A8G7R4|DGOD_SERP5 D-galactonate dehydratase OS=Serratia proteamaculans (strain 568)
GN=dgoD PE=3 SV=1
Length = 382
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
+++E G VGWGE P++ G V E +++ P +N + R
Sbjct: 18 LKIETDEGIVGWGE----PVIEGRARSVEAAVHELSEYVVGQDPARINDIWQTLYRGGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G S AG++ AL D ++ +P+++L GG + + + P++ +
Sbjct: 74 RGGPILMSAIAGIDQALWDIKGKALGVPVYQLLGGLVRDKIKAYSWVGGDRPSDVIAGIN 133
Query: 214 KYCKLGFSTLKLN 226
K ++GF T KLN
Sbjct: 134 KLTEIGFDTFKLN 146
>sp|Q3BUN6|DGOD_XANC5 D-galactonate dehydratase OS=Xanthomonas campestris pv. vesicatoria
(strain 85-10) GN=dgoD PE=3 SV=1
Length = 382
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 98 IRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFALDEIAR---I 154
++VE G GWGE P++ G V E ++ P +N + R
Sbjct: 18 LKVETDEGITGWGE----PVIEGRARSVEAAVHELAGYVVGKDPARINDLWQTLYRAGFY 73
Query: 155 LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIPAVSPAEASELAS 213
G+ S AG++ AL D ++ +P++ L GG + + T + P + +
Sbjct: 74 RGGAILMSAIAGIDQALWDIKGKTLGVPVYELLGGLVRDRMKTYRWVGGDRPGAIIQQIT 133
Query: 214 KYCKLGFSTLKLN 226
Y LGF T K N
Sbjct: 134 DYRALGFDTFKFN 146
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,241,797
Number of Sequences: 539616
Number of extensions: 5970016
Number of successful extensions: 15950
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 122
Number of HSP's that attempted gapping in prelim test: 15868
Number of HSP's gapped (non-prelim): 165
length of query: 438
length of database: 191,569,459
effective HSP length: 120
effective length of query: 318
effective length of database: 126,815,539
effective search space: 40327341402
effective search space used: 40327341402
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)