BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013683
(438 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 109/180 (60%), Gaps = 2/180 (1%)
Query: 261 FKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD-EFFNEVN 319
F L+ A++ F+ LG+GG G VY G L +GT VAVKRL Q + +F EV
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKL-LNWNKRFNIILG 378
+IS H+NL++L G + E LLVY Y+ N S+ + ++ +++ L+W KR I LG
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 379 TAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+A GLAYLH + +IIHRD+K +NILLD++F + DFGLA+ HV AV GT+
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTI 207
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 2/180 (1%)
Query: 261 FKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD-EFFNEVN 319
F L+ A++ F LG+GG G VY G L +G VAVKRL Q + +F EV
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKL-LNWNKRFNIILG 378
+IS H+NL++L G + E LLVY Y+ N S+ + ++ +++ L+W KR I LG
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 379 TAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+A GLAYLH + +IIHRD+K +NILLD++F + DFGLA+ HV AV G +
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXI 199
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 103/173 (59%), Gaps = 14/173 (8%)
Query: 260 SFKYETLEKATNYFNP------SKKLGQGGAGSVYMGSLPNGTTVAVKRLI----FNTRQ 309
SF + L+ TN F+ K+G+GG G VY G + N TTVAVK+L T +
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 66
Query: 310 WVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNW 369
+F E+ +++ +H+NLV+LLG S +G + LVY Y+PN SL + + T L+W
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 126
Query: 370 NKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARC 422
+ R I G A G+ +LH E IHRDIK++NILLD+ FT KI+DFGLAR
Sbjct: 127 HMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARA 176
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 112/191 (58%), Gaps = 19/191 (9%)
Query: 260 SFKYETLEKATNYFNP------SKKLGQGGAGSVYMGSLPNGTTVAVKRLI----FNTRQ 309
SF + L+ TN F+ K+G+GG G VY G + N TTVAVK+L T +
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 72
Query: 310 WVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNW 369
+F E+ +++ +H+NLV+LLG S +G + LVY Y+PN SL + + T L+W
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 370 NKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARC---FAAD 426
+ R I G A G+ +LH E IHRDIK++NILLD+ FT KI+DFGLAR FA
Sbjct: 133 HMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA-- 187
Query: 427 RTHVSTAVAGT 437
+T + + + GT
Sbjct: 188 QTVMXSRIVGT 198
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 103/173 (59%), Gaps = 14/173 (8%)
Query: 260 SFKYETLEKATNYFNP------SKKLGQGGAGSVYMGSLPNGTTVAVKRLI----FNTRQ 309
SF + L+ TN F+ K+G+GG G VY G + N TTVAVK+L T +
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 72
Query: 310 WVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNW 369
+F E+ +++ +H+NLV+LLG S +G + LVY Y+PN SL + + T L+W
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 370 NKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARC 422
+ R I G A G+ +LH E IHRDIK++NILLD+ FT KI+DFGLAR
Sbjct: 133 HMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARA 182
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 100/173 (57%), Gaps = 14/173 (8%)
Query: 260 SFKYETLEKATNYFNP------SKKLGQGGAGSVYMGSLPNGTTVAVKRLI----FNTRQ 309
SF + L+ TN F+ K G+GG G VY G + N TTVAVK+L T +
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 63
Query: 310 WVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNW 369
+F E+ + + +H+NLV+LLG S +G + LVY Y PN SL + + T L+W
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW 123
Query: 370 NKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARC 422
+ R I G A G+ +LH E IHRDIK++NILLD+ FT KI+DFGLAR
Sbjct: 124 HXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARA 173
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 107/176 (60%), Gaps = 7/176 (3%)
Query: 266 LEKATNYFNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIE 325
LE+ATN F+ +G G G VY G L +G VA+KR + Q ++EF E+ +S
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 326 HKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN-KTKLLNWNKRFNIILGTAEGLA 384
H +LV L+G E E +L+Y+Y+ N +L + ++ + T ++W +R I +G A GL
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 385 YLHGGSETR-IIHRDIKTSNILLDKDFTPKIADFGLA-RCFAADRTHVSTAVAGTL 438
YLH TR IIHRD+K+ NILLD++F PKI DFG++ + D+TH+ V GTL
Sbjct: 154 YLH----TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTL 205
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 106/176 (60%), Gaps = 7/176 (3%)
Query: 266 LEKATNYFNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIE 325
LE+ATN F+ +G G G VY G L +G VA+KR + Q ++EF E+ +S
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 326 HKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN-KTKLLNWNKRFNIILGTAEGLA 384
H +LV L+G E E +L+Y+Y+ N +L + ++ + T ++W +R I +G A GL
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 385 YLHGGSETR-IIHRDIKTSNILLDKDFTPKIADFGLA-RCFAADRTHVSTAVAGTL 438
YLH TR IIHRD+K+ NILLD++F PKI DFG++ + +TH+ V GTL
Sbjct: 154 YLH----TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTL 205
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 89/156 (57%), Gaps = 6/156 (3%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLI---FNTRQWVDEFFNEVNLISSIEHKNL 329
N +K+G G G+V+ +G+ VAVK L+ F+ + V+EF EV ++ + H N+
Sbjct: 39 LNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAER-VNEFLREVAIMKRLRHPNI 96
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
V +G + P +V EY+ SL + + + L+ +R ++ A+G+ YLH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAA 425
+ I+HRD+K+ N+L+DK +T K+ DFGL+R A+
Sbjct: 157 NPP-IVHRDLKSPNLLVDKKYTVKVCDFGLSRLKAS 191
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 97/169 (57%), Gaps = 9/169 (5%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLI---FNTRQWVDEFFNEVNLISSIEHKNL 329
N +K+G G G+V+ +G+ VAVK L+ F+ + V+EF EV ++ + H N+
Sbjct: 39 LNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAER-VNEFLREVAIMKRLRHPNI 96
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
V +G + P +V EY+ SL + + + L+ +R ++ A+G+ YLH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVST-AVAGT 437
+ I+HR++K+ N+L+DK +T K+ DFGL+R A+ T +S+ + AGT
Sbjct: 157 NPP-IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS--TFLSSKSAAGT 202
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
++LG G AG V+MG T VAVK L + D F E NL+ ++H+ LV+L
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ P ++ EY+ N SL F+ + KL NK ++ AEG+A++ E IH
Sbjct: 78 TQEP-IYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIE---ERNYIH 132
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCF 423
RD++ +NIL+ + KIADFGLAR
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLI 159
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
++LG G G V+MG T VAVK L + D F E NL+ ++H+ LV+L
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ P ++ EY+ N SL F+ + KL NK ++ AEG+A++ E IH
Sbjct: 73 TQEP-IYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIE---ERNYIH 127
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCF 423
RD++ +NIL+ + KIADFGLAR
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLI 154
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
++LG G G V+MG T VAVK L + D F E NL+ ++H+ LV+L
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ P ++ EY+ N SL F+ + KL NK ++ AEG+A++ E IH
Sbjct: 78 TQEP-IYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIE---ERNYIH 132
Query: 397 RDIKTSNILLDKDFTPKIADFGLAR 421
RD++ +NIL+ + KIADFGLAR
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLAR 157
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
++LG G G V+MG T VAVK L + D F E NL+ ++H+ LV+L
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ P ++ EY+ N SL F+ + KL NK ++ AEG+A++ E IH
Sbjct: 78 TQEP-IYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIE---ERNYIH 132
Query: 397 RDIKTSNILLDKDFTPKIADFGLAR 421
RD++ +NIL+ + KIADFGLAR
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLAR 157
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
++LG G G V+MG T VAVK L + D F E NL+ ++H+ LV+L
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ P ++ EY+ N SL F+ + KL NK ++ AEG+A++ E IH
Sbjct: 84 TQEP-IYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIE---ERNYIH 138
Query: 397 RDIKTSNILLDKDFTPKIADFGLAR 421
RD++ +NIL+ + KIADFGLAR
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLAR 163
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
++LG G G V+MG T VAVK L + D F E NL+ ++H+ LV+L
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ P ++ EY+ N SL F+ + KL NK ++ AEG+A++ E IH
Sbjct: 79 TQEP-IYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIE---ERNYIH 133
Query: 397 RDIKTSNILLDKDFTPKIADFGLAR 421
RD++ +NIL+ + KIADFGLAR
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLAR 158
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
++LG G G V+MG T VAVK L + D F E NL+ ++H+ LV+L
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ P ++ EY+ N SL F+ + KL NK ++ AEG+A++ E IH
Sbjct: 78 TQEP-IYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIE---ERNYIH 132
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCF 423
RD++ +NIL+ + KIADFGLAR
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLI 159
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
++LG G G V+MG T VAVK L + D F E NL+ ++H+ LV+L
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ P ++ EY+ N SL F+ + KL NK ++ AEG+A++ E IH
Sbjct: 83 TQEP-IYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIE---ERNYIH 137
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCF 423
RD++ +NIL+ + KIADFGLAR
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLI 164
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
++LG G G V+MG T VAVK L + D F E NL+ ++H+ LV+L
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ P ++ EY+ N SL F+ + KL NK ++ AEG+A++ E IH
Sbjct: 88 TQEP-IYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIE---ERNYIH 142
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCF 423
RD++ +NIL+ + KIADFGLAR
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLI 169
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
++LG G G V+MG T VAVK L + D F E NL+ ++H+ LV+L
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ P ++ EY+ N SL F+ + KL NK ++ AEG+A++ E IH
Sbjct: 80 TQEP-IYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIE---ERNYIH 134
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCF 423
RD++ +NIL+ + KIADFGLAR
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLI 161
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
++LG G G V+MG T VAVK L + D F E NL+ ++H+ LV+L
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ P ++ EY+ N SL F+ + KL NK ++ AEG+A++ E IH
Sbjct: 87 TQEP-IYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIE---ERNYIH 141
Query: 397 RDIKTSNILLDKDFTPKIADFGLAR 421
RD++ +NIL+ + KIADFGLAR
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLAR 166
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
++LG G G V+MG T VAVK L + D F E NL+ ++H+ LV+L
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ P ++ EY+ N SL F+ + KL NK ++ AEG+A++ E IH
Sbjct: 86 TQEP-IYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIE---ERNYIH 140
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCF 423
RD++ +NIL+ + KIADFGLAR
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLI 167
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
++LG G G V+MG T VAVK L + D F E NL+ ++H+ LV+L
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ P ++ EY+ N SL F+ + KL NK ++ AEG+A++ E IH
Sbjct: 84 TQEP-IYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIE---ERNYIH 138
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCF 423
RD++ +NIL+ + KIADFGLAR
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLI 165
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 5/147 (3%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
KKLG G G V+MG N T VAVK L T V F E NL+ +++H LV+L
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ ++ E++ SL F+ K+L K + AEG+AY+ IH
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE---RKNYIH 132
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCF 423
RD++ +N+L+ + KIADFGLAR
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVI 159
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
K+LG G G V+MG N T VAVK L T V F E NL+ +++H LV+L
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
++ EY+ SL F+ K+L K + AEG+AY+ IH
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE---RKNYIH 133
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCF 423
RD++ +N+L+ + KIADFGLAR
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVI 160
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
++LG G G V+MG T VAVK L + D F E NL+ ++H+ LV+L
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ P ++ EY+ N SL F+ + KL NK ++ AEG+A++ E IH
Sbjct: 74 TQEP-IYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIE---ERNYIH 128
Query: 397 RDIKTSNILLDKDFTPKIADFGLAR 421
R+++ +NIL+ + KIADFGLAR
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLAR 153
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G+VY G V + + T Q + F NEV ++ H N++ +G S
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 337 IEGPESLLVYEYVPNRSLDQFI-FDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+ P+ +V ++ SL + + K +++ K +I TA+G+ YLH S II
Sbjct: 76 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 128
Query: 396 HRDIKTSNILLDKDFTPKIADFGLA 420
HRD+K++NI L +D T KI DFGLA
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLA 153
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G+VY G V + + T Q + F NEV ++ H N++ +G S
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 337 IEGPESLLVYEYVPNRSLDQFI-FDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+ P+ +V ++ SL + + K +++ K +I TA+G+ YLH S II
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 131
Query: 396 HRDIKTSNILLDKDFTPKIADFGLA 420
HRD+K++NI L +D T KI DFGLA
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G+VY G V + + T Q + F NEV ++ H N++ +G S
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 337 IEGPESLLVYEYVPNRSLDQFI-FDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+ P+ +V ++ SL + + K +++ K +I TA+G+ YLH S II
Sbjct: 101 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 153
Query: 396 HRDIKTSNILLDKDFTPKIADFGLA 420
HRD+K++NI L +D T KI DFGLA
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLA 178
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G+VY G V + + T Q + F NEV ++ H N++ +G S
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 337 IEGPESLLVYEYVPNRSLDQFI-FDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+ P+ +V ++ SL + + K +++ K +I TA+G+ YLH S II
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 154
Query: 396 HRDIKTSNILLDKDFTPKIADFGLA 420
HRD+K++NI L +D T KI DFGLA
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G+VY G V + + T Q + F NEV ++ H N++ +G S
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 337 IEGPESLLVYEYVPNRSLDQFI-FDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+ P+ +V ++ SL + + K +++ K +I TA+G+ YLH S II
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 154
Query: 396 HRDIKTSNILLDKDFTPKIADFGLA 420
HRD+K++NI L +D T KI DFGLA
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G+VY G V + + T Q + F NEV ++ H N++ +G S
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 337 IEGPESLLVYEYVPNRSLDQFI-FDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+ P+ +V ++ SL + + K +++ K +I TA+G+ YLH S II
Sbjct: 94 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 146
Query: 396 HRDIKTSNILLDKDFTPKIADFGLA 420
HRD+K++NI L +D T KI DFGLA
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G+VY G V + + T Q + F NEV ++ H N++ +G S
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 337 IEGPESLLVYEYVPNRSLDQFI-FDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+ P+ +V ++ SL + + K +++ K +I TA+G+ YLH S II
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 131
Query: 396 HRDIKTSNILLDKDFTPKIADFGLA 420
HRD+K++NI L +D T KI DFGLA
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G+VY G V + + T Q + F NEV ++ H N++ +G S
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 337 IEGPESLLVYEYVPNRSLDQFI-FDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+ P+ +V ++ SL + + K +++ K +I TA+G+ YLH S II
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 126
Query: 396 HRDIKTSNILLDKDFTPKIADFGLA 420
HRD+K++NI L +D T KI DFGLA
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G+VY G V + + T Q + F NEV ++ H N++ +G S
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 337 IEGPESLLVYEYVPNRSLDQFI-FDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+ P+ +V ++ SL + + K +++ K +I TA+G+ YLH S II
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 126
Query: 396 HRDIKTSNILLDKDFTPKIADFGLA 420
HRD+K++NI L +D T KI DFGLA
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G+VY G V + + T Q + F NEV ++ H N++ +G S
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 337 IEGPESLLVYEYVPNRSLDQFI-FDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
P+ +V ++ SL + + K +++ K +I TA+G+ YLH S II
Sbjct: 74 T-APQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---II 126
Query: 396 HRDIKTSNILLDKDFTPKIADFGLA 420
HRD+K++NI L +D T KI DFGLA
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
++LG+G GSV M G VAVK+L +T + + +F E+ ++ S++H N+VK
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 332 LLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
G C G +L L+ EY+P SL ++ K+K ++ + K +G+ YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI-DHIKLLQYTSQICKGMEYL--- 161
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
R IHRD+ T NIL++ + KI DFGL + D+ G
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 208
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
++LG+G GSV M G VAVK+L +T + + +F E+ ++ S++H N+VK
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 332 LLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
G C G +L L+ EY+P SL ++ K+K ++ + K +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI-DHIKLLQYTSQICKGMEYL--- 148
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
R IHRD+ T NIL++ + KI DFGL + D+ G
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 195
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
++LG+G GSV M G VAVK+L +T + + +F E+ ++ S++H N+VK
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 332 LLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
G C G +L L+ EY+P SL ++ K+K ++ + K +G+ YL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI-DHIKLLQYTSQICKGMEYL--- 135
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
R IHRD+ T NIL++ + KI DFGL + D+ G
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 182
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
++LG+G GSV M G VAVK+L +T + + +F E+ ++ S++H N+VK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 332 LLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
G C G +L L+ EY+P SL ++ K+K ++ + K +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI-DHIKLLQYTSQICKGMEYL--- 130
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
R IHRD+ T NIL++ + KI DFGL + D+ G
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
++LG+G GSV M G VAVK+L +T + + +F E+ ++ S++H N+VK
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 332 LLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
G C G +L L+ EY+P SL ++ K+K ++ + K +G+ YL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI-DHIKLLQYTSQICKGMEYL--- 137
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
R IHRD+ T NIL++ + KI DFGL + D+ G
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 184
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
++LG+G GSV M G VAVK+L +T + + +F E+ ++ S++H N+VK
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 332 LLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
G C G +L L+ EY+P SL ++ K+K ++ + K +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI-DHIKLLQYTSQICKGMEYL--- 133
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
R IHRD+ T NIL++ + KI DFGL + D+ G
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
++LG+G GSV M G VAVK+L +T + + +F E+ ++ S++H N+VK
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 332 LLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
G C G +L L+ EY+P SL ++ K+K ++ + K +G+ YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI-DHIKLLQYTSQICKGMEYL--- 128
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
R IHRD+ T NIL++ + KI DFGL + D+ G
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 175
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
++LG+G GSV M G VAVK+L +T + + +F E+ ++ S++H N+VK
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 332 LLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
G C G +L L+ EY+P SL ++ K+K ++ + K +G+ YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI-DHIKLLQYTSQICKGMEYL--- 136
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
R IHRD+ T NIL++ + KI DFGL + D+ G
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 183
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
++LG+G GSV M G VAVK+L +T + + +F E+ ++ S++H N+VK
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 332 LLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
G C G +L L+ EY+P SL ++ K+K ++ + K +G+ YL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI-DHIKLLQYTSQICKGMEYL--- 129
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
R IHRD+ T NIL++ + KI DFGL + D+ G
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 176
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G+VY G V + + T Q + F NEV ++ H N++ +G S
Sbjct: 18 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ P+ +V ++ SL + ++TK K +I TA G+ YLH S IIH
Sbjct: 78 TK-PQLAIVTQWCEGSSLYHHLH-ASETKF-EMKKLIDIARQTARGMDYLHAKS---IIH 131
Query: 397 RDIKTSNILLDKDFTPKIADFGLA 420
RD+K++NI L +D T KI DFGLA
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLA 155
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
++LG+G GSV M G VAVK+L +T + + +F E+ ++ S++H N+VK
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 332 LLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
G C G +L L+ EY+P SL ++ K+K ++ + K +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI-DHIKLLQYTSQICKGMEYL--- 148
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
R IHRD+ T NIL++ + KI DFGL + D+ G
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 195
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G+VY G V + + T Q + F NEV ++ H N++ +G S
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
P+ +V ++ SL + ++TK K +I TA G+ YLH S IIH
Sbjct: 90 T-APQLAIVTQWCEGSSLYHHLH-ASETKF-EMKKLIDIARQTARGMDYLHAKS---IIH 143
Query: 397 RDIKTSNILLDKDFTPKIADFGLA 420
RD+K++NI L +D T KI DFGLA
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G+VY G V + + T Q + F NEV ++ H N++ +G S
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ P+ +V ++ SL + ++TK K +I TA G+ YLH S IIH
Sbjct: 90 TK-PQLAIVTQWCEGSSLYHHLH-ASETKF-EMKKLIDIARQTARGMDYLHAKS---IIH 143
Query: 397 RDIKTSNILLDKDFTPKIADFGLA 420
RD+K++NI L +D T KI DFGLA
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
++LG+G GSV M G VAVK+L +T + + +F E+ ++ S++H N+VK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 332 LLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
G C G +L L+ EY+P SL ++ K+K ++ + K +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI-DHIKLLQYTSQICKGMEYL--- 130
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
R IHRD+ T NIL++ + KI DFGL + D+ G
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
++LG+G GSV M G VAVK+L +T + + +F E+ ++ S++H N+VK
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 332 LLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
G C G +L L+ EY+P SL ++ K+K ++ + K +G+ YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI-DHIKLLQYTSQICKGMEYL--- 134
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
R IHRD+ T NIL++ + KI DFGL + D+ G
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 181
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
++LG+G GSV M G VAVK+L +T + + +F E+ ++ S++H N+VK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 332 LLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
G C G +L L+ EY+P SL ++ K+K ++ + K +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI-DHIKLLQYTSQICKGMEYL--- 130
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
R IHRD+ T NIL++ + KI DFGL + D+ G
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPG 177
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 265 TLEKATNYFNPSKKLGQGGAGSVYMGSL----PNGTTVAVKRLI--FNTRQWVDEFFNEV 318
T E + + K +G G +G V G L VA+K L + RQ D F +E
Sbjct: 43 TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD-FLSEA 101
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILG 378
+++ +H N+++L G G +++V EY+ N SLD F+ + + ++ G
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRG 159
Query: 379 TAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
G+ YL S+ +HRD+ N+L+D + K++DFGL+R D T G +
Sbjct: 160 VGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI 216
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 12/167 (7%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
++LG+G GSV M G VAVK+L +T + + +F E+ ++ S++H N+VK
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 332 LLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
G C G +L L+ E++P SL +++ K+K ++ + K +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYL-QKHKERI-DHIKLLQYTSQICKGMEYL--- 133
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
R IHRD+ T NIL++ + KI DFGL + D+ G
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 87/163 (53%), Gaps = 15/163 (9%)
Query: 278 KLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLG-C 335
KLG G G VY+G TVAVK L +T + V+EF E ++ I+H NLV+LLG C
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 97
Query: 336 SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGT--AEGLAYLHGGSETR 393
++E P +V EY+P +L ++ + N+ ++ + + T + + YL +
Sbjct: 98 TLE-PPFYIVTEYMPYGNLLDYLRECNREEV---TAVVLLYMATQISSAMEYL---EKKN 150
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
IHRD+ N L+ ++ K+ADFGL+R D TA AG
Sbjct: 151 FIHRDLAARNCLVGENHVVKVADFGLSRLMTGD---TYTAHAG 190
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ + H+ LV+L
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKT-KLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
E P +V EY+ SL F+ K +T K L + ++ A G+AY+ +H
Sbjct: 74 EEP-IXIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 127
Query: 397 RDIKTSNILLDKDFTPKIADFGLAR 421
RD++ +NIL+ ++ K+ADFGLAR
Sbjct: 128 RDLRAANILVGENLVCKVADFGLAR 152
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 265 TLEKATNYFNPSKKLGQGGAGSVYMGSL----PNGTTVAVKRLI--FNTRQWVDEFFNEV 318
T E + + K +G G +G V G L VA+K L + RQ D F +E
Sbjct: 43 TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD-FLSEA 101
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILG 378
+++ +H N+++L G G +++V EY+ N SLD F+ + + ++ G
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRG 159
Query: 379 TAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
G+ YL S+ +HRD+ N+L+D + K++DFGL+R D T G +
Sbjct: 160 VGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI 216
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ I H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHR 397
E P +V EY+ SL F+ K L + ++ A G+AY+ +HR
Sbjct: 84 EEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 398 DIKTSNILLDKDFTPKIADFGLAR 421
D++ +NIL+ ++ K+ADFGLAR
Sbjct: 139 DLRAANILVGENLVCKVADFGLAR 162
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ + H+ LV+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKT-KLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
E P +V EY+ SL F+ K +T K L + ++ A G+AY+ +H
Sbjct: 250 EEP-IYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 303
Query: 397 RDIKTSNILLDKDFTPKIADFGLAR 421
RD++ +NIL+ ++ K+ADFGLAR
Sbjct: 304 RDLRAANILVGENLVCKVADFGLAR 328
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ + H+ LV+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKT-KLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
E P +V EY+ SL F+ K +T K L + ++ A G+AY+ +H
Sbjct: 250 EEP-IYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 303
Query: 397 RDIKTSNILLDKDFTPKIADFGLAR 421
RD++ +NIL+ ++ K+ADFGLAR
Sbjct: 304 RDLRAANILVGENLVCKVADFGLAR 328
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ + H+ LV+L
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKT-KLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
E P +V EY+ SL F+ K +T K L + ++ A G+AY+ +H
Sbjct: 77 EEP-IYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 130
Query: 397 RDIKTSNILLDKDFTPKIADFGLAR 421
RD++ +NIL+ ++ K+ADFGLAR
Sbjct: 131 RDLRAANILVGENLVCKVADFGLAR 155
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 12/167 (7%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
++LG+G GSV M G VAVK+L +T + + +F E+ ++ S++H N+VK
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 332 LLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
G C G +L L+ EY+P SL ++ K+K + ++ K +G+ YL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKER-IDHIKLLQYTSQICKGMEYL--- 131
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
R IHR++ T NIL++ + KI DFGL + D+ + G
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPG 178
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 277 KKLGQGGAGSVYMGSL--PNGTTVAV-----KRLIFNTRQWVDEFFNEVNLISSIEHKNL 329
+KLG G G V G P+G TV+V K + + + +D+F EVN + S++H+NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
++L G + P +V E P SL + LL R+ + AEG+ YL
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYL--- 137
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
R IHRD+ N+LL KI DFGL R + H
Sbjct: 138 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 277 KKLGQGGAGSVYMGSL--PNGTTVAV-----KRLIFNTRQWVDEFFNEVNLISSIEHKNL 329
+KLG G G V G P+G TV+V K + + + +D+F EVN + S++H+NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
++L G + P +V E P SL + LL R+ + AEG+ YL
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYL--- 137
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
R IHRD+ N+LL KI DFGL R + H
Sbjct: 138 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 277 KKLGQGGAGSVYMGSL--PNGTTVAV-----KRLIFNTRQWVDEFFNEVNLISSIEHKNL 329
+KLG G G V G P+G TV+V K + + + +D+F EVN + S++H+NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
++L G + P +V E P SL + LL R+ + AEG+ YL
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYL--- 131
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
R IHRD+ N+LL KI DFGL R + H
Sbjct: 132 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 277 KKLGQGGAGSVYMGSL--PNGTTVAV-----KRLIFNTRQWVDEFFNEVNLISSIEHKNL 329
+KLG G G V G P+G TV+V K + + + +D+F EVN + S++H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
++L G + P +V E P SL + LL R+ + AEG+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYL--- 127
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
R IHRD+ N+LL KI DFGL R + H
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 277 KKLGQGGAGSVYMGSL--PNGTTVAV-----KRLIFNTRQWVDEFFNEVNLISSIEHKNL 329
+KLG G G V G P+G TV+V K + + + +D+F EVN + S++H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
++L G + P +V E P SL + LL R+ + AEG+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYL--- 127
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
R IHRD+ N+LL KI DFGL R + H
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
++LG+G GSV M G VAVK+L +T + + +F E+ ++ S++H N+VK
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 332 LLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
G C G +L L+ EY+P SL ++ + + ++ K +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGMEYL--- 133
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
R IHRD+ T NIL++ + KI DFGL + D+ G
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 277 KKLGQGGAGSVYMGSL--PNGTTVAV-----KRLIFNTRQWVDEFFNEVNLISSIEHKNL 329
+KLG G G V G P+G TV+V K + + + +D+F EVN + S++H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
++L G + P +V E P SL + LL R+ + AEG+ YL
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYL--- 127
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
R IHRD+ N+LL KI DFGL R + H
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 9/158 (5%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLG-C 335
K+LG G G V +G VAVK +I DEFF E + + H LVK G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVK-MIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 336 SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
S E P +V EY+ N L ++ ++ K L ++ + EG+A+L + I
Sbjct: 73 SKEYP-IYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFI 126
Query: 396 HRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTA 433
HRD+ N L+D+D K++DFG+ R + D +VS+
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTR-YVLDDQYVSSV 163
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ + H+ LV+L
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKT-KLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
E P +V EY+ SL F+ K +T K L + ++ A G+AY+ +H
Sbjct: 333 EEP-IYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 386
Query: 397 RDIKTSNILLDKDFTPKIADFGLAR 421
RD++ +NIL+ ++ K+ADFGLAR
Sbjct: 387 RDLRAANILVGENLVCKVADFGLAR 411
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 277 KKLGQGGAGSVYMGSL--PNGTTVAV-----KRLIFNTRQWVDEFFNEVNLISSIEHKNL 329
+KLG G G V G P+G TV+V K + + + +D+F EVN + S++H+NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
++L G + P +V E P SL + LL R+ + AEG+ YL
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYL--- 131
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
R IHRD+ N+LL KI DFGL R + H
Sbjct: 132 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ + H+ LV+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKT-KLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
E P +V EY+ SL F+ K +T K L + ++ A G+AY+ +H
Sbjct: 250 EEP-IYIVGEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 303
Query: 397 RDIKTSNILLDKDFTPKIADFGLAR 421
RD++ +NIL+ ++ K+ADFGLAR
Sbjct: 304 RDLRAANILVGENLVCKVADFGLAR 328
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ + H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHR 397
E P +V EY+ SL F+ K L + ++ A G+AY+ +HR
Sbjct: 84 EEP-IYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 398 DIKTSNILLDKDFTPKIADFGLAR 421
D++ +NIL+ ++ K+ADFGLAR
Sbjct: 139 DLRAANILVGENLVCKVADFGLAR 162
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 20/161 (12%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTV----AVKRLIFNTRQWVD-EFFNEVNLISSIEHKNLV 330
K LG G G+VY G +P G TV A+K L T + EF +E +++S++H +LV
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 331 KLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEGLAYL 386
+LLG + P LV + +P+ L +++ + LLNW + A+G+ YL
Sbjct: 104 RLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 156
Query: 387 HGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
E R++HRD+ N+L+ KI DFGLAR D
Sbjct: 157 ---EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 194
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 18/166 (10%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQW-------VDEFFNEVNL 320
A N K++G+GG G V+ G L + + VA+K LI + EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTA 380
+S++ H N+VKL G P +V E+VP L + DK + W+ + ++L A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIA 132
Query: 381 EGLAYLHGGSETRIIHRDIKTSNILL-----DKDFTPKIADFGLAR 421
G+ Y+ + I+HRD+++ NI L + K+ADFGL++
Sbjct: 133 LGIEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ + H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHR 397
E P +V EY+ SL F+ K L + ++ A G+AY+ +HR
Sbjct: 84 EEP-IYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 398 DIKTSNILLDKDFTPKIADFGLAR 421
D++ +NIL+ ++ K+ADFGLAR
Sbjct: 139 DLRAANILVGENLVCKVADFGLAR 162
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 20/161 (12%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTV----AVKRLIFNTRQWVD-EFFNEVNLISSIEHKNLV 330
K LG G G+VY G +P G TV A+K L T + EF +E +++S++H +LV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 331 KLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKT----KLLNWNKRFNIILGTAEGLAYL 386
+LLG + P LV + +P+ L +++ + LLNW + A+G+ YL
Sbjct: 81 RLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 133
Query: 387 HGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
E R++HRD+ N+L+ KI DFGLAR D
Sbjct: 134 ---EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 171
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ + H+ LV+L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKT-KLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
E P +V EY+ SL F+ K +T K L + ++ A G+AY+ +H
Sbjct: 81 EEP-IYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 397 RDIKTSNILLDKDFTPKIADFGLAR 421
RD++ +NIL+ ++ K+ADFGLAR
Sbjct: 135 RDLRAANILVGENLVCKVADFGLAR 159
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ + H+ LV+L
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHR 397
E P +V EY+ SL F+ K L + ++ A G+AY+ +HR
Sbjct: 73 EEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 127
Query: 398 DIKTSNILLDKDFTPKIADFGLAR 421
D++ +NIL+ ++ K+ADFGLAR
Sbjct: 128 DLRAANILVGENLVCKVADFGLAR 151
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ + H+ LV+L
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHR 397
E P +V EY+ SL F+ K L + ++ A G+AY+ +HR
Sbjct: 75 EEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 129
Query: 398 DIKTSNILLDKDFTPKIADFGLAR 421
D++ +NIL+ ++ K+ADFGLAR
Sbjct: 130 DLRAANILVGENLVCKVADFGLAR 153
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ + H+ LV+L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKT-KLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
E P +V EY+ SL F+ K +T K L + ++ A G+AY+ +H
Sbjct: 81 EEP-IYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 397 RDIKTSNILLDKDFTPKIADFGLAR 421
RD++ +NIL+ ++ K+ADFGLAR
Sbjct: 135 RDLRAANILVGENLVCKVADFGLAR 159
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ + H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHR 397
E P +V EY+ SL F+ K L + ++ A G+AY+ +HR
Sbjct: 84 EEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 398 DIKTSNILLDKDFTPKIADFGLAR 421
D++ +NIL+ ++ K+ADFGLAR
Sbjct: 139 DLRAANILVGENLVCKVADFGLAR 162
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ + H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHR 397
E P +V EY+ SL F+ K L + ++ A G+AY+ +HR
Sbjct: 84 EEP-IYIVCEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 398 DIKTSNILLDKDFTPKIADFGLAR 421
D++ +NIL+ ++ K+ADFGLAR
Sbjct: 139 DLRAANILVGENLVCKVADFGLAR 162
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
K+LG G G V+MG+ T VA+K L T + F E ++ ++H LV+L
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMS-PESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
E P +V EY+ SL F+ D + + L ++ A G+AY+ IH
Sbjct: 74 SEEP-IYIVTEYMNKGSLLDFLKD-GEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIH 128
Query: 397 RDIKTSNILLDKDFTPKIADFGLAR 421
RD++++NIL+ KIADFGLAR
Sbjct: 129 RDLRSANILVGNGLICKIADFGLAR 153
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ + H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHR 397
E P +V EY+ SL F+ K L + ++ A G+AY+ +HR
Sbjct: 84 EEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 398 DIKTSNILLDKDFTPKIADFGLAR 421
D+ +NIL+ ++ K+ADFGLAR
Sbjct: 139 DLAAANILVGENLVCKVADFGLAR 162
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ + H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHR 397
E P +V EY+ L F+ K L + ++ A G+AY+ +HR
Sbjct: 84 EEP-IYIVMEYMSKGCLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 398 DIKTSNILLDKDFTPKIADFGLAR 421
D++ +NIL+ ++ K+ADFGLAR
Sbjct: 139 DLRAANILVGENLVCKVADFGLAR 162
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 268 KATNYFNPS-----KKLGQGGAGSVYMGSLPNGT-----TVAVKRLI--FNTRQWVDEFF 315
K T +PS K +G G G VY G L + VA+K L + +Q VD F
Sbjct: 36 KFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD-FL 94
Query: 316 NEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNI 375
E ++ H N+++L G + +++ EY+ N +LD+F+ +K+ + + +
Sbjct: 95 GEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE--FSVLQLVGM 152
Query: 376 ILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
+ G A G+ YL + +HRD+ NIL++ + K++DFGL+R D T
Sbjct: 153 LRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSG 209
Query: 436 GTL 438
G +
Sbjct: 210 GKI 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 15/188 (7%)
Query: 252 TSMKKSCLSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQW 310
TSM S S Y+ E KLG G G VY G TVAVK L +T +
Sbjct: 1 TSMDPS--SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME- 57
Query: 311 VDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWN 370
V+EF E ++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ N
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV---N 114
Query: 371 KRFNIILGT--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRT 428
+ + T + + YL + IHRD+ N L+ ++ K+ADFGL+R D
Sbjct: 115 AVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-- 169
Query: 429 HVSTAVAG 436
TA AG
Sbjct: 170 -TYTAHAG 176
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 276 SKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
KKLG G G V+M + T VAVK + + V+ F E N++ +++H LVKL
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 336 SIEGPESLLVYEYVPNRSLDQFI-FDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
+ P ++ E++ SL F+ D+ + L K + AEG+A++ +
Sbjct: 246 VTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE---QRNY 299
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFA 424
IHRD++ +NIL+ KIADFGLAR A
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARVGA 329
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 15/188 (7%)
Query: 252 TSMKKSCLSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQW 310
TSM S S Y+ E KLG G G VY G TVAVK L +T +
Sbjct: 1 TSMDPS--SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME- 57
Query: 311 VDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWN 370
V+EF E ++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ N
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---N 114
Query: 371 KRFNIILGT--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRT 428
+ + T + + YL + IHRD+ N L+ ++ K+ADFGL+R D
Sbjct: 115 AVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-- 169
Query: 429 HVSTAVAG 436
TA AG
Sbjct: 170 -TYTAHAG 176
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L T + F E ++ + H+ LV+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHR 397
E P +V EY+ L F+ K L + ++ A G+AY+ +HR
Sbjct: 84 EEP-IYIVTEYMSKGCLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 138
Query: 398 DIKTSNILLDKDFTPKIADFGLAR 421
D++ +NIL+ ++ K+ADFGLAR
Sbjct: 139 DLRAANILVGENLVCKVADFGLAR 162
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 18/166 (10%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQW-------VDEFFNEVNL 320
A N K++G+GG G V+ G L + + VA+K LI + EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTA 380
+S++ H N+VKL G P +V E+VP L + DK + W+ + ++L A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIA 132
Query: 381 EGLAYLHGGSETRIIHRDIKTSNILLDK--DFTP---KIADFGLAR 421
G+ Y+ + I+HRD+++ NI L + P K+ADFG ++
Sbjct: 133 LGIEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ 177
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 276 SKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
KKLG G G V+M + T VAVK + + V+ F E N++ +++H LVKL
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 336 SIEGPESLLVYEYVPNRSLDQFI-FDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
+ P ++ E++ SL F+ D+ + L K + AEG+A++ +
Sbjct: 252 VTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE---QRNY 305
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCF 423
IHRD++ +NIL+ KIADFGLAR
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVI 334
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 78/166 (46%), Gaps = 12/166 (7%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ----WVDEFFNEVNLISSIEHK 327
F+ +++G G G+VY + N VA+K++ ++ +Q W D EV + + H
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD-IIKEVRFLQKLRHP 114
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLH 387
N ++ GC + + LV EY + D K K L + + G +GLAYLH
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLH 171
Query: 388 GGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTA 433
+ +IHRD+K NILL + K+ DFG A A V T
Sbjct: 172 SHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTP 214
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 78/166 (46%), Gaps = 12/166 (7%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ----WVDEFFNEVNLISSIEHK 327
F+ +++G G G+VY + N VA+K++ ++ +Q W D EV + + H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD-IIKEVRFLQKLRHP 75
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLH 387
N ++ GC + + LV EY + D K K L + + G +GLAYLH
Sbjct: 76 NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLH 132
Query: 388 GGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTA 433
+ +IHRD+K NILL + K+ DFG A A V T
Sbjct: 133 SHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTP 175
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 259 LSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNE 317
+S Y+ E KLG G G VY G TVAVK L +T + V+EF E
Sbjct: 2 MSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKE 60
Query: 318 VNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ N + +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---NAVVLLYM 117
Query: 378 GT--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
T + + YL + IHRD+ N L+ ++ K+ADFGL+R D TA A
Sbjct: 118 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAPA 171
Query: 436 G 436
G
Sbjct: 172 G 172
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 259 LSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNE 317
+S Y+ E KLG G G VY G TVAVK L +T + V+EF E
Sbjct: 3 MSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKE 61
Query: 318 VNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ N + +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---NAVVLLYM 118
Query: 378 GT--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
T + + YL + IHRD+ N L+ ++ K+ADFGL+R D TA A
Sbjct: 119 ATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAPA 172
Query: 436 G 436
G
Sbjct: 173 G 173
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 18/166 (10%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQW-------VDEFFNEVNL 320
A N K++G+GG G V+ G L + + VA+K LI + EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTA 380
+S++ H N+VKL G P +V E+VP L + DK + W+ + ++L A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIA 132
Query: 381 EGLAYLHGGSETRIIHRDIKTSNILL-----DKDFTPKIADFGLAR 421
G+ Y+ + I+HRD+++ NI L + K+ADF L++
Sbjct: 133 LGIEYMQNQNPP-IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ 177
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 8/155 (5%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIE 325
++ F+ +KLG+G GSVY G VA+K++ + + E E++++ +
Sbjct: 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCD 82
Query: 326 HKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAY 385
++VK G + + +V EY S+ I +NKT L ++ I+ T +GL Y
Sbjct: 83 SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT--LTEDEIATILQSTLKGLEY 140
Query: 386 LHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
LH R IHRDIK NILL+ + K+ADFG+A
Sbjct: 141 LHF---MRKIHRDIKAGNILLNTEGHAKLADFGVA 172
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 276 SKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
KKLG G G V+M + T VAVK + + V+ F E N++ +++H LVKL
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 336 SIEGPESLLVYEYVPNRSLDQFI-FDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
+ P ++ E++ SL F+ D+ + L K + AEG+A++ +
Sbjct: 79 VTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE---QRNY 132
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCF 423
IHRD++ +NIL+ KIADFGLAR
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVI 161
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 259 LSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNE 317
+S Y+ E KLG G G VY G TVAVK L +T + V+EF E
Sbjct: 3 MSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKE 61
Query: 318 VNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ N + +
Sbjct: 62 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---NAVVLLYM 118
Query: 378 GT--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
T + + YL + IHRD+ N L+ ++ K+ADFGL+R D TA A
Sbjct: 119 ATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHA 172
Query: 436 G 436
G
Sbjct: 173 G 173
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 19/161 (11%)
Query: 280 GQGGAGSVYMGSLPNGTTVAVKRLIFNTRQ-WVDEFFNEVNLISSIEHKNLVKLLGCSIE 338
+G G V+ L N VAVK +Q W +E+ EV + ++H+N+++ +G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKR 89
Query: 339 GP----ESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLH------- 387
G + L+ + SL F+ K +++WN+ +I A GLAYLH
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 388 GGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRT 428
G + I HRDIK+ N+LL + T IADFGLA F A ++
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 260 SFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEV 318
S Y+ E KLG G G VY G TVAVK L +T + V+EF E
Sbjct: 7 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEA 65
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILG 378
++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ N + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---NAVVLLYMA 122
Query: 379 T--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
T + + YL + IHRD+ N L+ ++ K+ADFGL+R D TA AG
Sbjct: 123 TQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TXTAHAG 176
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 259 LSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNE 317
+S Y+ E KLG G G VY G TVAVK L +T + V+EF E
Sbjct: 1 VSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKE 59
Query: 318 VNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ N + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---NAVVLLYM 116
Query: 378 GT--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
T + + YL + IHRD+ N L+ ++ K+ADFGL+R D TA A
Sbjct: 117 ATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHA 170
Query: 436 G 436
G
Sbjct: 171 G 171
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 19/162 (11%)
Query: 276 SKKLGQGGAGSVYMGSLPN------GTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNL 329
++LG+G G V++ N VAVK L + +F E L+++++H+++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFI----------FDKNKTKLLNWNKRFNIILGT 379
VK G +EG ++V+EY+ + L++F+ + N L ++ +I
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 380 AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
A G+ YL + +HRD+ T N L+ ++ KI DFG++R
Sbjct: 138 AAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 259 LSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNE 317
+S Y+ E KLG G G VY G TVAVK L +T + V+EF E
Sbjct: 1 VSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKE 59
Query: 318 VNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ N + +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---NAVVLLYM 116
Query: 378 GT--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
T + + YL + IHRD+ N L+ ++ K+ADFGL+R D TA A
Sbjct: 117 ATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHA 170
Query: 436 G 436
G
Sbjct: 171 G 171
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 260 SFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEV 318
S Y+ E KLG G G VY G TVAVK L +T + V+EF E
Sbjct: 3 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEA 61
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILG 378
++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ N + +
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV---NAVVLLYMA 118
Query: 379 T--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
T + + YL + IHRD+ N L+ ++ K+ADFGL+R D TA AG
Sbjct: 119 TQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TXTAHAG 172
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 278 KLGQGGAGSVYMG--SLPNGTTVAVKRLIFNTRQ---WVDEFFNEVNLISSIEHKNLVKL 332
KLG GG +VY+ ++ N VA+K + R+ + F EV+ S + H+N+V +
Sbjct: 18 KLGGGGMSTVYLAEDTILN-IKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 333 LGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSET 392
+ E LV EY+ +L ++I L+ + N +G+ + H +
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGIKHAH---DM 130
Query: 393 RIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
RI+HRDIK NIL+D + T KI DFG+A+ + + V GT+
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 260 SFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEV 318
S Y+ E KLG G G VY G TVAVK L +T + V+EF E
Sbjct: 6 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEA 64
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILG 378
++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ N + +
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---NAVVLLYMA 121
Query: 379 T--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
T + + YL + IHRD+ N L+ ++ K+ADFGL+R D TA AG
Sbjct: 122 TQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAG 175
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMG--SLPNG--TTVAVKRL-IFNTRQWVDEFFNEVNLISS 323
ATN + K +G G G V G LP+ +VA+K L + T + +F E +++
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
+H N+++L G + ++V EY+ N SLD F+ + + ++ G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
YL S+ +HRD+ NIL++ + K++DFGLAR D T G +
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI 212
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 260 SFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEV 318
S Y+ E KLG G G VY G TVAVK L +T + V+EF E
Sbjct: 7 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEA 65
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILG 378
++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ N + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---NAVVLLYMA 122
Query: 379 T--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
T + + YL + IHRD+ N L+ ++ K+ADFGL+R D TA AG
Sbjct: 123 TQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAG 176
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 278 KLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
KLG G G VY G TVAVK L +T + V+EF E ++ I+H NLV+LLG
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGT--AEGLAYLHGGSETRI 394
P ++ E++ +L ++ + N+ ++ N + + T + + YL +
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLRECNRQEV---NAVVLLYMATQISSAMEYL---EKKNF 134
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
IHRD+ N L+ ++ K+ADFGL+R D TA AG
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAG 173
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 278 KLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
KLG G G VY G TVAVK L +T + V+EF E ++ I+H NLV+LLG
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 91
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGT--AEGLAYLHGGSETRI 394
P ++ E++ +L ++ + N+ ++ N + + T + + YL +
Sbjct: 92 TREPPFYIITEFMTYGNLLDYLRECNRQEV---NAVVLLYMATQISSAMEYL---EKKNF 145
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
IHRD+ N L+ ++ K+ADFGL+R D TA AG
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAG 184
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
KLGQG G V+MG+ T VA+K L + F E ++ + H+ LV+L
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHR 397
E P +V EY+ SL F+ K L + ++ A G+AY+ +HR
Sbjct: 251 EEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 305
Query: 398 DIKTSNILLDKDFTPKIADFGLAR 421
D++ +NIL+ ++ K+ADFGL R
Sbjct: 306 DLRAANILVGENLVCKVADFGLGR 329
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMG--SLPNG--TTVAVKRL-IFNTRQWVDEFFNEVNLISS 323
ATN + K +G G G V G LP+ +VA+K L + T + +F E +++
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
+H N+++L G + ++V EY+ N SLD F+ + + ++ G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
YL S+ +HRD+ NIL++ + K++DFGL+R D T G +
Sbjct: 161 KYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 87/170 (51%), Gaps = 28/170 (16%)
Query: 262 KYETLEKATNYFNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDE-----FFN 316
KY+ LEK +G+G G VY G VA+KR+ + DE
Sbjct: 22 KYQKLEK----------VGEGTYGVVYKAKDSQGRIVALKRIRLDAE---DEGIPSTAIR 68
Query: 317 EVNLISSIEHKNLVKLLGCSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNI 375
E++L+ + H N+V L+ I L LV+E++ + L + + D+NKT L + + I
Sbjct: 69 EISLLKELHHPNIVSLIDV-IHSERCLTLVFEFM-EKDLKK-VLDENKTGLQD--SQIKI 123
Query: 376 IL-GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
L G+A+ H + RI+HRD+K N+L++ D K+ADFGLAR F
Sbjct: 124 YLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFG 170
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G V++G N VA+K + + D+F E ++ + H LV+L G
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMS-EDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+E LV+E++ + L ++ + + L + L EG+AYL E +IH
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIH 146
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTA 433
RD+ N L+ ++ K++DFG+ R D+ ST
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 183
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 87/170 (51%), Gaps = 28/170 (16%)
Query: 262 KYETLEKATNYFNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDE-----FFN 316
KY+ LEK +G+G G VY G VA+KR+ + DE
Sbjct: 22 KYQKLEK----------VGEGTYGVVYKAKDSQGRIVALKRIRLDAE---DEGIPSTAIR 68
Query: 317 EVNLISSIEHKNLVKLLGCSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNI 375
E++L+ + H N+V L+ I L LV+E++ + L + + D+NKT L + + I
Sbjct: 69 EISLLKELHHPNIVSLIDV-IHSERCLTLVFEFM-EKDLKK-VLDENKTGLQD--SQIKI 123
Query: 376 IL-GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
L G+A+ H + RI+HRD+K N+L++ D K+ADFGLAR F
Sbjct: 124 YLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFG 170
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMG--SLPNG--TTVAVKRL-IFNTRQWVDEFFNEVNLISS 323
ATN + K +G G G V G LP+ +VA+K L + T + +F E +++
Sbjct: 32 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 90
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
+H N+++L G + ++V EY+ N SLD F+ + + ++ G A G+
Sbjct: 91 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 148
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
YL S+ +HRD+ NIL++ + K++DFGL+R D T G +
Sbjct: 149 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 200
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMG--SLPNG--TTVAVKRL-IFNTRQWVDEFFNEVNLISS 323
ATN + K +G G G V G LP+ +VA+K L + T + +F E +++
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
+H N+++L G + ++V EY+ N SLD F+ + + ++ G A G+
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 131
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
YL S+ +HRD+ NIL++ + K++DFGL+R D T G +
Sbjct: 132 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMG--SLPNG--TTVAVKRL-IFNTRQWVDEFFNEVNLISS 323
ATN + K +G G G V G LP+ +VA+K L + T + +F E +++
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
+H N+++L G + ++V EY+ N SLD F+ + + ++ G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
YL S+ +HRD+ NIL++ + K++DFGL+R D T G +
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMG--SLPNG--TTVAVKRL-IFNTRQWVDEFFNEVNLISS 323
ATN + K +G G G V G LP+ +VA+K L + T + +F E +++
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
+H N+++L G + ++V EY+ N SLD F+ + + ++ G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
YL S+ +HRD+ NIL++ + K++DFGL+R D T G +
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMG--SLPNG--TTVAVKRL-IFNTRQWVDEFFNEVNLISS 323
ATN + K +G G G V G LP+ +VA+K L + T + +F E +++
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
+H N+++L G + ++V EY+ N SLD F+ + + ++ G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
YL S+ +HRD+ NIL++ + K++DFGL+R D T G +
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMG--SLPNG--TTVAVKRL-IFNTRQWVDEFFNEVNLISS 323
ATN + K +G G G V G LP+ +VA+K L + T + +F E +++
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
+H N+++L G + ++V EY+ N SLD F+ + + ++ G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
YL S+ +HRD+ NIL++ + K++DFGL+R D T G +
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMG--SLPNG--TTVAVKRL-IFNTRQWVDEFFNEVNLISS 323
ATN + K +G G G V G LP+ +VA+K L + T + +F E +++
Sbjct: 42 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 100
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
+H N+++L G + ++V EY+ N SLD F+ + + ++ G A G+
Sbjct: 101 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 158
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
YL S+ +HRD+ NIL++ + K++DFGL+R D T G +
Sbjct: 159 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 278 KLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
KLG G G VY G TVAVK L +T + V+EF E ++ I+H NLV+LLG
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGT--AEGLAYLHGGSETRI 394
P ++ E++ +L ++ + N+ ++ + + + T + + YL +
Sbjct: 77 TREPPFYIIIEFMTYGNLLDYLRECNRQEV---SAVVLLYMATQISSAMEYL---EKKNF 130
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
IHRD+ N L+ ++ K+ADFGL+R D TA AG
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TXTAHAG 169
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMG--SLPNG--TTVAVKRL-IFNTRQWVDEFFNEVNLISS 323
ATN + K +G G G V G LP+ +VA+K L + T + +F E +++
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
+H N+++L G + ++V EY+ N SLD F+ + + ++ G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
YL S+ +HRD+ NIL++ + K++DFGL R D T G +
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 260 SFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEV 318
S Y+ E KLG G G VY G TVAVK L +T + V+EF E
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEA 60
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILG 378
++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ + + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV---SAVVLLYMA 117
Query: 379 T--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
T + + YL + IHRD+ N L+ ++ K+ADFGL+R D TA AG
Sbjct: 118 TQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAG 171
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 260 SFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEV 318
S Y+ E KLG G G VY G TVAVK L +T + V+EF E
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEA 60
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILG 378
++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ + + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV---SAVVLLYMA 117
Query: 379 T--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
T + + YL + IHRD+ N L+ ++ K+ADFGL+R D TA AG
Sbjct: 118 TQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAG 171
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 260 SFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEV 318
S Y+ E KLG G G VY G TVAVK L +T + V+EF E
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEA 60
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILG 378
++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ + + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---SAVVLLYMA 117
Query: 379 T--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
T + + YL + IHRD+ N L+ ++ K+ADFGL+R D TA AG
Sbjct: 118 TQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAG 171
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G V++G N VA+K I ++F E ++ + H LV+L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKT-IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+E LV+E++ + L ++ + + L + L EG+AYL E +IH
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIH 126
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCFAADRTHVST 432
RD+ N L+ ++ K++DFG+ R D+ ST
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 162
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 278 KLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
KLG G G VY G TVAVK L +T + V+EF E ++ I+H NLV+LLG
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGT--AEGLAYLHGGSETRI 394
P ++ E++ +L ++ + N+ ++ + + + T + + YL +
Sbjct: 77 TREPPFYIITEFMTYGNLLDYLRECNRQEV---SAVVLLYMATQISSAMEYL---EKKNF 130
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
IHRD+ N L+ ++ K+ADFGL+R D TA AG
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TXTAHAG 169
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 260 SFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEV 318
S Y+ E KLG G G VY G TVAVK L +T + V+EF E
Sbjct: 7 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEA 65
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILG 378
++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ + + +
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---SAVVLLYMA 122
Query: 379 T--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
T + + YL + IHRD+ N L+ ++ K+ADFGL+R D TA AG
Sbjct: 123 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAG 176
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 260 SFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEV 318
S Y+ E KLG G G VY G TVAVK L +T + V+EF E
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEA 60
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILG 378
++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ + + +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---SAVVLLYMA 117
Query: 379 T--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
T + + YL + IHRD+ N L+ ++ K+ADFGL+R D TA AG
Sbjct: 118 TQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAG 171
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 79/162 (48%), Gaps = 21/162 (12%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNL--ISSIEHKNLVKLL--- 333
+G+G G+VY GSL + VAVK F RQ F NE N+ + +EH N+ + +
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQ---NFINEKNIYRVPLMEHDNIARFIVGD 76
Query: 334 -GCSIEGP-ESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLH---- 387
+ +G E LLV EY PN SL +++ +W + GLAYLH
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTRGLAYLHTELP 132
Query: 388 --GGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ I HRD+ + N+L+ D T I+DFGL+ +R
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 278 KLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
KLG G G VY G TVAVK L +T + V+EF E ++ I+H NLV+LLG
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGT--AEGLAYLHGGSETRI 394
P ++ E++ +L ++ + N+ ++ + + + T + + YL +
Sbjct: 77 TREPPFYIITEFMTYGNLLDYLRECNRQEV---SAVVLLYMATQISSAMEYL---EKKNF 130
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
IHRD+ N L+ ++ K+ADFGL+R D
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGD 162
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 259 LSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNE 317
+S Y+ E KLG G G VY G TVAVK L +T + V+EF E
Sbjct: 247 VSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKE 305
Query: 318 VNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ N + +
Sbjct: 306 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---NAVVLLYM 362
Query: 378 GT--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
T + + YL + IHR++ N L+ ++ K+ADFGL+R D TA A
Sbjct: 363 ATQISSAMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHA 416
Query: 436 G 436
G
Sbjct: 417 G 417
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 259 LSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNE 317
+S Y+ E KLG G G VY G TVAVK L +T + V+EF E
Sbjct: 205 VSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKE 263
Query: 318 VNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ N + +
Sbjct: 264 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---NAVVLLYM 320
Query: 378 GT--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
T + + YL + IHR++ N L+ ++ K+ADFGL+R D TA A
Sbjct: 321 ATQISSAMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHA 374
Query: 436 G 436
G
Sbjct: 375 G 375
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 279 LGQGGAG-SVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
LG+G G ++ + G + +K LI + F EV ++ +EH N++K +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 338 EGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHR 397
+ + EY+ +L I K+ W++R + A G+AYLH IIHR
Sbjct: 78 KDKRLNFITEYIKGGTLRGII--KSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHR 132
Query: 398 DIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
D+ + N L+ ++ +ADFGLAR ++T
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G V++G N VA+K I ++F E ++ + H LV+L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKT-IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+E LV+E++ + L ++ + + L + L EG+AYL E +IH
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIH 126
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTA 433
RD+ N L+ ++ K++DFG+ R D+ ST
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 163
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G V++G N VA+K I ++F E ++ + H LV+L G
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKT-IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+E LV+E++ + L ++ + + L + L EG+AYL E +IH
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIH 129
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTA 433
RD+ N L+ ++ K++DFG+ R D+ ST
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 166
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G V++G N VA+K I ++F E ++ + H LV+L G
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKT-IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+E LV+E++ + L ++ + + L + L EG+AYL E +IH
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIH 124
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTA 433
RD+ N L+ ++ K++DFG+ R D+ ST
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 161
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 8/149 (5%)
Query: 271 NYFNPSKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNL 329
+Y + K+G+G G V + ++ +G VAVK++ +Q + FNEV ++ +H+N+
Sbjct: 24 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
V++ + G E +V E++ +L + +N + + L + L+ LH
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 139
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFG 418
+IHRDIK+ +ILL D K++DFG
Sbjct: 140 G---VIHRDIKSDSILLTHDGRVKLSDFG 165
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 276 SKKLGQGGAGSVYMGSLP----NGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLV 330
+ +G G G V G L VA+K L + T + +F E +++ +H N+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 331 KLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
L G G ++V E++ N +LD F+ + + ++ G A G+ YL +
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFL--RKHDGQFTVIQLVGMLRGIAAGMRYL---A 162
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+ +HRD+ NIL++ + K++DFGL+R D V T G +
Sbjct: 163 DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI 210
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 8/149 (5%)
Query: 271 NYFNPSKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNL 329
+Y + K+G+G G V + ++ +G VAVK++ +Q + FNEV ++ +H+N+
Sbjct: 20 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
V++ + G E +V E++ +L + +N + + L + L+ LH
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 135
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFG 418
+IHRDIK+ +ILL D K++DFG
Sbjct: 136 G---VIHRDIKSDSILLTHDGRVKLSDFG 161
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 8/149 (5%)
Query: 271 NYFNPSKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNL 329
+Y + K+G+G G V + ++ +G VAVK++ +Q + FNEV ++ +H+N+
Sbjct: 31 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
V++ + G E +V E++ +L + +N + + L + L+ LH
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 146
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFG 418
+IHRDIK+ +ILL D K++DFG
Sbjct: 147 G---VIHRDIKSDSILLTHDGRVKLSDFG 172
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 8/149 (5%)
Query: 271 NYFNPSKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNL 329
+Y + K+G+G G V + ++ +G VAVK++ +Q + FNEV ++ +H+N+
Sbjct: 29 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
V++ + G E +V E++ +L + +N + + L + L+ LH
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 144
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFG 418
+IHRDIK+ +ILL D K++DFG
Sbjct: 145 G---VIHRDIKSDSILLTHDGRVKLSDFG 170
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 277 KKLGQGGAGSVYMGSL----PNGTTVAVKRLIFNTR-QWVDEFFNEVNLISSIEHKNLVK 331
+ +G+G G VY G N A+K L T Q V+ F E L+ + H N++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 332 LLGCSIEGPESL--LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
L+G + PE L ++ Y+ + L QFI + + F L A G+ YL
Sbjct: 87 LIGIMLP-PEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFG--LQVARGMEYL--- 140
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+E + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 141 AEQKFVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 26/177 (14%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIF--------------NTRQWVDEFFNEVNLIS 322
+KLG G G V + NG + ++I N ++ +E +NE++L+
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 323 SIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEG 382
S++H N++KL + LV E+ L + I +++K + NI+ G
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK---FDECDAANIMKQILSG 158
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKD---FTPKIADFGLARCFAAD---RTHVSTA 433
+ YLH + I+HRDIK NILL+ KI DFGL+ F+ D R + TA
Sbjct: 159 ICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTA 212
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 242 EDRNN-LGLYATSMKKSCLSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLP----NGT 296
ED N + +A ++ SC+ T+E+ +G G G V G L
Sbjct: 6 EDPNQAVHEFAKEIEASCI-----TIERV---------IGAGEFGEVCSGRLKLPGKREL 51
Query: 297 TVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLD 355
VA+K L + T + +F E +++ +H N++ L G + ++V EY+ N SLD
Sbjct: 52 PVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLD 111
Query: 356 QFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIA 415
F+ K + ++ G + G+ YL S+ +HRD+ NIL++ + K++
Sbjct: 112 TFL--KKNDGQFTVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVS 166
Query: 416 DFGLARCFAADRTHVSTAVAGTL 438
DFGL+R D T G +
Sbjct: 167 DFGLSRVLEDDPEAAYTTRGGKI 189
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMG--SLPNG--TTVAVKRL-IFNTRQWVDEFFNEVNLISS 323
ATN + K +G G G V G LP+ +VA+K L + T + +F E +++
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
+H N+++L G + ++V E + N SLD F+ + + ++ G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
YL S+ +HRD+ NIL++ + K++DFGL+R D T G +
Sbjct: 161 KYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 278 KLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
K+G+G G V + + + G VAVK++ +Q + FNEV ++ H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ G E +V E++ +L + +N + + L L+YLH +IH
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIATVCLSVLRALSYLHNQG---VIH 164
Query: 397 RDIKTSNILLDKDFTPKIADFG 418
RDIK+ +ILL D K++DFG
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFG 186
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMG--SLPNG--TTVAVKRL-IFNTRQWVDEFFNEVNLISS 323
ATN + K +G G G V G LP+ +VA+K L + T + +F E +++
Sbjct: 44 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
+H N+++L G + ++V E + N SLD F+ + + ++ G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGM 160
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
YL S+ +HRD+ NIL++ + K++DFGL+R D T G +
Sbjct: 161 KYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 15/177 (8%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMG--SLPNG--TTVAVKRL-IFNTRQWVDEFFNEVNLISS 323
ATN + K +G G G V G LP+ +VA+K L + T + +F E +++
Sbjct: 15 ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI--FDKNKTKLLNWNKRFNIILGTAE 381
+H N+++L G + ++V E + N SLD F+ D T + + ++ G A
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI----QLVGMLRGIAS 129
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
G+ YL S+ +HRD+ NIL++ + K++DFGL+R D T G +
Sbjct: 130 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E+V ++ L +F+ D + + + + +GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEHV-DQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 75/142 (52%), Gaps = 8/142 (5%)
Query: 278 KLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
K+G+G G V + ++ +G VAVK++ +Q + FNEV ++ +H+N+V++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ G E +V E++ +L + +N + + L + L+ LH +IH
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIH 193
Query: 397 RDIKTSNILLDKDFTPKIADFG 418
RDIK+ +ILL D K++DFG
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFG 215
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 259 LSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNE 317
+S Y+ E KLG G G VY G TVAVK L +T + V+EF E
Sbjct: 208 VSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKE 266
Query: 318 VNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
++ I+H NLV+LLG P ++ E++ +L ++ + N+ ++ + + +
Sbjct: 267 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---SAVVLLYM 323
Query: 378 GT--AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
T + + YL + IHR++ N L+ ++ K+ADFGL+R D TA A
Sbjct: 324 ATQISSAMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHA 377
Query: 436 G 436
G
Sbjct: 378 G 378
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 279 LGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFN-----EVNLISSIEHKNLVKL 332
LG+G +VY N VA+K++ R + N E+ L+ + H N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 333 LGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSET 392
L LV++++ D + K+ + +L + +L T +GL YLH +
Sbjct: 78 LDAFGHKSNISLVFDFM---ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QH 131
Query: 393 RIIHRDIKTSNILLDKDFTPKIADFGLARCFAA 425
I+HRD+K +N+LLD++ K+ADFGLA+ F +
Sbjct: 132 WILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 75/142 (52%), Gaps = 8/142 (5%)
Query: 278 KLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
K+G+G G V + ++ +G VAVK++ +Q + FNEV ++ +H+N+V++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ G E +V E++ +L + +N + + L + L+ LH +IH
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG---VIH 270
Query: 397 RDIKTSNILLDKDFTPKIADFG 418
RDIK+ +ILL D K++DFG
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFG 292
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 11/173 (6%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEF-FNEVNLISSIEH 326
+++ F +KLG G +VY G + G VA+K + ++ + E++L+ ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPN---RSLDQFIFDKNKTKL-LNWNKRFNIILGTAEG 382
+N+V+L + LV+E++ N + +D L LN K F L +G
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL--LQG 120
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
LA+ H E +I+HRD+K N+L++K K+ DFGLAR F S+ V
Sbjct: 121 LAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV 170
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 8/159 (5%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+K+GQG +G+VY + G VA++++ + + NE+ ++ ++ N+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 336 SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+ G E +V EY+ SL + + ++ + + + L +LH ++I
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 396 HRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAV 434
HRDIK+ NILL D + K+ DFG +++ ST V
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 177
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 276 SKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
S ++G G G+VY G V + +++ T + F NEV ++ H N++ +G
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 336 SIEGPESLLVYEYVPNRSLDQFI-FDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
+ +V ++ SL + + + K ++ + +I TA+G+ YLH + I
Sbjct: 101 MTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMF---QLIDIARQTAQGMDYLHAKN---I 153
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLA 420
IHRD+K++NI L + T KI DFGLA
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLA 179
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 6/157 (3%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+++G G G V++G N VA+K + ++F E ++ + H LV+L G
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+E LV E++ + L ++ + + L + L EG+AYL E +IH
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIH 127
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTA 433
RD+ N L+ ++ K++DFG+ R D+ ST
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 164
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E+V ++ L F+ D + + + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEHV-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 124 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 166
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 130 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 172
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 278 KLGQGGAGSVYMGS----LP--NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
+LG+G G V++ LP + VAVK L + +F E L++ ++H+++V+
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQFIFDKNK-TKL-----------LNWNKRFNIILGT 379
G EG L+V+EY+ + L++F+ KL L + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 380 AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
A G+ YL G +HRD+ T N L+ + KI DFG++R
Sbjct: 145 AAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSR 183
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 127 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 169
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 278 KLGQGGAGSVYMGS----LP--NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
+LG+G G V++ LP + VAVK L + +F E L++ ++H+++V+
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQFIFDKNK-TKL-----------LNWNKRFNIILGT 379
G EG L+V+EY+ + L++F+ KL L + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 380 AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
A G+ YL G +HRD+ T N L+ + KI DFG++R
Sbjct: 139 AAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSR 177
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 278 KLGQGGAGSVYMGS----LP--NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVK 331
+LG+G G V++ LP + VAVK L + +F E L++ ++H+++V+
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQFIFDKNK-TKL-----------LNWNKRFNIILGT 379
G EG L+V+EY+ + L++F+ KL L + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 380 AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
A G+ YL G +HRD+ T N L+ + KI DFG++R
Sbjct: 168 AAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSR 206
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 19/165 (11%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSI--EHKNLVKLLG 334
K++G+G G V+MG G VAVK + F T + +F E + ++ H+N++ +
Sbjct: 43 KQIGKGRYGEVWMGKW-RGEKVAVK-VFFTTEE--ASWFRETEIYQTVLMRHENILGFIA 98
Query: 335 CSIEGPESL----LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG-- 388
I+G S L+ +Y N SL +D K+ L+ + + GL +LH
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSL----YDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 389 ---GSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHV 430
+ I HRD+K+ NIL+ K+ T IAD GLA F +D V
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEV 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 124 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 164
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 164
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 124 ---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 125 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 130 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 172
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 125 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 124 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 125 ---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 127 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 169
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 89/176 (50%), Gaps = 17/176 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMGSLP----NGTTVAVKRLI--FNTRQWVDEFFNEVNL 320
E +Y + +G G G V G L + VA+K L + RQ EF +E ++
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ-RREFLSEASI 68
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-FDKNKTKLLNWNKRFNIILGT 379
+ EH N+++L G +++ E++ N +LD F+ + + ++ + ++ G
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGI 125
Query: 380 AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCF---AADRTHVST 432
A G+ YL +E +HRD+ NIL++ + K++DFGL+R ++D T+ S+
Sbjct: 126 ASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS 178
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 278 KLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
K+G+G G V + + G VAVK + +Q + FNEV ++ +H N+V++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ G E ++ E++ +L + LN + + + LAYLH +IH
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQVR----LNEEQIATVCEAVLQALAYLHAQG---VIH 164
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCFAAD 426
RDIK+ +ILL D K++DFG + D
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKD 194
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L F+ D + + + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKDFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 123 ---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 165
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 272 YFNPSKKLGQGGAGSVYMGSL--PNGTTV--AVKRL--IFNTRQWVDEFFNEVNLISSIE 325
+FN + +G+G G VY G+L +G + AVK L I + + V +F E ++
Sbjct: 25 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFS 81
Query: 326 HKNLVKLLGCSIEGPES-LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++ LLG + S L+V Y+ + L FI +N+T L A+G+
Sbjct: 82 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 139
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YL + + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 140 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 272 YFNPSKKLGQGGAGSVYMGSL--PNGTTV--AVKRL--IFNTRQWVDEFFNEVNLISSIE 325
+FN + +G+G G VY G+L +G + AVK L I + + V +F E ++
Sbjct: 30 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFS 86
Query: 326 HKNLVKLLGCSIEGPES-LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++ LLG + S L+V Y+ + L FI +N+T L A+G+
Sbjct: 87 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 144
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YL + + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 145 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 272 YFNPSKKLGQGGAGSVYMGSL--PNGTTV--AVKRL--IFNTRQWVDEFFNEVNLISSIE 325
+FN + +G+G G VY G+L +G + AVK L I + + V +F E ++
Sbjct: 28 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFS 84
Query: 326 HKNLVKLLGCSIEGPES-LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++ LLG + S L+V Y+ + L FI +N+T L A+G+
Sbjct: 85 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 142
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YL + + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 143 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L F+ D + + + + +GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 272 YFNPSKKLGQGGAGSVYMGSL--PNGTTV--AVKRL--IFNTRQWVDEFFNEVNLISSIE 325
+FN + +G+G G VY G+L +G + AVK L I + + V +F E ++
Sbjct: 51 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFS 107
Query: 326 HKNLVKLLGCSIEGPES-LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++ LLG + S L+V Y+ + L FI +N+T L A+G+
Sbjct: 108 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 165
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YL + + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 166 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GL++ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 272 YFNPSKKLGQGGAGSVYMGSL--PNGTTV--AVKRL--IFNTRQWVDEFFNEVNLISSIE 325
+FN + +G+G G VY G+L +G + AVK L I + + V +F E ++
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFS 89
Query: 326 HKNLVKLLGCSIEGPES-LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++ LLG + S L+V Y+ + L FI +N+T L A+G+
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 147
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YL + + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 272 YFNPSKKLGQGGAGSVYMGSL--PNGTTV--AVKRL--IFNTRQWVDEFFNEVNLISSIE 325
+FN + +G+G G VY G+L +G + AVK L I + + V +F E ++
Sbjct: 31 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFS 87
Query: 326 HKNLVKLLGCSIEGPES-LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++ LLG + S L+V Y+ + L FI +N+T L A+G+
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 145
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YL + + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 146 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 272 YFNPSKKLGQGGAGSVYMGSL--PNGTTV--AVKRL--IFNTRQWVDEFFNEVNLISSIE 325
+FN + +G+G G VY G+L +G + AVK L I + + V +F E ++
Sbjct: 32 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFS 88
Query: 326 HKNLVKLLGCSIEGPES-LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++ LLG + S L+V Y+ + L FI +N+T L A+G+
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 146
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YL + + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 82/160 (51%), Gaps = 19/160 (11%)
Query: 272 YFNPSKKLGQG--GAGSVYMGSLPN---GTTVAVKRLIFNT-RQWVDEFFNEVNLISSIE 325
Y + LG+G G S+Y N G VAVK L + Q + E++++ ++
Sbjct: 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLY 91
Query: 326 HKNLVKLLGCSIE-GPESL-LVYEYVPNRSLDQFIFDKN--KTKLLNWNKRFNIILGTAE 381
H++++K GC + G SL LV EYVP SL ++ + +LL + ++ E
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQI------CE 145
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+AYLH IHRD+ N+LLD D KI DFGLA+
Sbjct: 146 GMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 32/162 (19%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEHKNLVK 331
+K+G+G G VY G T A+K++ DE E++++ ++H N+VK
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKE---DEGIPSTTIREISILKELKHSNIVK 64
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLN---------WNKRFNIILGTAEG 382
L +LV+E++ D++ KLL+ K F +L G
Sbjct: 65 LYDVIHTKKRLVLVFEHL----------DQDLKKLLDVCEGGLESVTAKSF--LLQLLNG 112
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
+AY H + R++HRD+K N+L++++ KIADFGLAR F
Sbjct: 113 IAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFG 151
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 272 YFNPSKKLGQGGAGSVYMGSL--PNGTTV--AVKRL--IFNTRQWVDEFFNEVNLISSIE 325
+FN + +G+G G VY G+L +G + AVK L I + + V +F E ++
Sbjct: 52 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFS 108
Query: 326 HKNLVKLLGCSIEGPES-LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++ LLG + S L+V Y+ + L FI +N+T L A+G+
Sbjct: 109 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 166
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YL + + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 167 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ + L +F+ D + + + + +GLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-SMDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 124 ---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 32/162 (19%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEHKNLVK 331
+K+G+G G VY G T A+K++ DE E++++ ++H N+VK
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKE---DEGIPSTTIREISILKELKHSNIVK 64
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLN---------WNKRFNIILGTAEG 382
L +LV+E++ D++ KLL+ K F +L G
Sbjct: 65 LYDVIHTKKRLVLVFEHL----------DQDLKKLLDVCEGGLESVTAKSF--LLQLLNG 112
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
+AY H + R++HRD+K N+L++++ KIADFGLAR F
Sbjct: 113 IAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFG 151
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 32/162 (19%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEHKNLVK 331
+K+G+G G VY G T A+K++ DE E++++ ++H N+VK
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKE---DEGIPSTTIREISILKELKHSNIVK 64
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLN---------WNKRFNIILGTAEG 382
L +LV+E++ D++ KLL+ K F +L G
Sbjct: 65 LYDVIHTKKRLVLVFEHL----------DQDLKKLLDVCEGGLESVTAKSF--LLQLLNG 112
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
+AY H + R++HRD+K N+L++++ KIADFGLAR F
Sbjct: 113 IAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFG 151
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 272 YFNPSKKLGQGGAGSVYMGSL--PNGTTV--AVKRL--IFNTRQWVDEFFNEVNLISSIE 325
+FN + +G+G G VY G+L +G + AVK L I + + V +F E ++
Sbjct: 32 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFS 88
Query: 326 HKNLVKLLGCSIEGPES-LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++ LLG + S L+V Y+ + L FI +N+T L A+G+
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 146
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YL + + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 272 YFNPSKKLGQGGAGSVYMGSL--PNGTTV--AVKRL--IFNTRQWVDEFFNEVNLISSIE 325
+FN + +G+G G VY G+L +G + AVK L I + + V +F E ++
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFS 89
Query: 326 HKNLVKLLGCSIEGPES-LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++ LLG + S L+V Y+ + L FI +N+T L A+G+
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 147
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YL + + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ + L +F+ D + + + + +GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-SMDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 126 ---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+K+GQG +G+VY + G VA++++ + + NE+ ++ ++ N+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 336 SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+ G E +V EY+ SL + + ++ + + + L +LH ++I
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHS---NQVI 138
Query: 396 HRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAV 434
HRDIK+ NILL D + K+ DFG +++ S V
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV 177
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+K+GQG +G+VY + G VA++++ + + NE+ ++ ++ N+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 336 SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+ G E +V EY+ SL + + ++ + + + L +LH ++I
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 396 HRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAV 434
HRDIK+ NILL D + K+ DFG +++ S V
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV 177
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+K+GQG +G+VY + G VA++++ + + NE+ ++ ++ N+V L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 336 SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+ G E +V EY+ SL + + ++ + + + L +LH ++I
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 396 HRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAV 434
HRDIK+ NILL D + K+ DFG +++ S V
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV 178
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 17/176 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMGSLP----NGTTVAVKRLI--FNTRQWVDEFFNEVNL 320
E +Y + +G G G V G L + VA+K L + RQ EF +E ++
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ-RREFLSEASI 70
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-FDKNKTKLLNWNKRFNIILGT 379
+ EH N+++L G +++ E++ N +LD F+ + + ++ + ++ G
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLRGI 127
Query: 380 AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCF---AADRTHVST 432
A G+ YL +E +HRD+ NIL++ + K++DFGL+R ++D T S+
Sbjct: 128 ASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSS 180
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 8/159 (5%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+K+GQG +G+VY + G VA++++ + + NE+ ++ ++ N+V L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 336 SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+ G E +V EY+ SL + + ++ + + + L +LH ++I
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 396 HRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAV 434
HR+IK+ NILL D + K+ DFG +++ ST V
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 178
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 24/175 (13%)
Query: 276 SKKLGQGGAGSVYMGSLP----NGTTVAVKRLI--FNTRQWVDEFFNEVNLISSIEHKNL 329
K +G G G V G L VA+K L + +Q D F +E +++ +H N+
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNI 77
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL------GTAEGL 383
+ L G + +++ EY+ N SLD F+ KN + RF +I G G+
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFL-RKN-------DGRFTVIQLVGMLRGIGSGM 129
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
YL S+ +HRD+ NIL++ + K++DFG++R D T G +
Sbjct: 130 KYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 181
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+ +G+G G V +G G VAVK F E ++++ + H NLV+LLG
Sbjct: 27 QTIGKGEFGDVMLGDY-RGNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 337 IEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+E L +V EY+ SL ++ + ++ +L + L E + YL G + +
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---FV 139
Query: 396 HRDIKTSNILLDKDFTPKIADFGLAR 421
HRD+ N+L+ +D K++DFGL +
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTK 165
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 21/157 (13%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNT----RQWVDEFFNEVNLISSIEHKNLVKLLG 334
+G GG G VY + G VAVK + Q ++ E L + ++H N++ L G
Sbjct: 15 IGIGGFGKVYR-AFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 335 CSIEGPESLLVYEYVPNRSLDQFIFDKNKTK--LLNWNKRFNIILGTAEGLAYLHGGSET 392
++ P LV E+ L++ + K L+NW + A G+ YLH +
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNYLHDEAIV 127
Query: 393 RIIHRDIKTSNILL-----DKDFTP---KIADFGLAR 421
IIHRD+K+SNIL+ + D + KI DFGLAR
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 32/179 (17%)
Query: 277 KKLGQGGAGSVYMGSLPN------GTTVAVKRLIFNTRQWVD-EFFNEVNLISSIEHKNL 329
+ +G+G G V+ P T VAVK L + +F E L++ ++ N+
Sbjct: 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKL---------------------LN 368
VKLLG G L++EY+ L++F+ + + L+
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 369 WNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR-CFAAD 426
++ I A G+AYL SE + +HRD+ T N L+ ++ KIADFGL+R ++AD
Sbjct: 173 CAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 228
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 24/175 (13%)
Query: 276 SKKLGQGGAGSVYMGSLP----NGTTVAVKRLI--FNTRQWVDEFFNEVNLISSIEHKNL 329
K +G G G V G L VA+K L + +Q D F +E +++ +H N+
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNI 92
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL------GTAEGL 383
+ L G + +++ EY+ N SLD F+ KN + RF +I G G+
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSLDAFL-RKN-------DGRFTVIQLVGMLRGIGSGM 144
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
YL S+ +HRD+ NIL++ + K++DFG++R D T G +
Sbjct: 145 KYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 196
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 24/175 (13%)
Query: 276 SKKLGQGGAGSVYMGSLP----NGTTVAVKRLI--FNTRQWVDEFFNEVNLISSIEHKNL 329
K +G G G V G L VA+K L + +Q D F +E +++ +H N+
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNI 71
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL------GTAEGL 383
+ L G + +++ EY+ N SLD F+ KN + RF +I G G+
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFL-RKN-------DGRFTVIQLVGMLRGIGSGM 123
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
YL S+ +HRD+ NIL++ + K++DFG++R D T G +
Sbjct: 124 KYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI 175
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+ +G+G G V +G G VAVK + + F E ++++ + H NLV+LLG
Sbjct: 199 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 337 IEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+E L +V EY+ SL ++ + ++ +L + L E + YL G + +
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---FV 311
Query: 396 HRDIKTSNILLDKDFTPKIADFGLAR 421
HRD+ N+L+ +D K++DFGL +
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTK 337
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ + L F+ D + + + + +GLA+ H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-SMDLKDFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 125 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 167
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 19/160 (11%)
Query: 272 YFNPSKKLGQG--GAGSVYMGSLPN---GTTVAVKRLIFNT-RQWVDEFFNEVNLISSIE 325
Y + LG+G G S+Y N G VAVK L + Q + E++++ ++
Sbjct: 15 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY 74
Query: 326 HKNLVKLLGC-SIEGPESL-LVYEYVPNRSLDQFIFDKN--KTKLLNWNKRFNIILGTAE 381
H++++K GC +G +SL LV EYVP SL ++ + +LL + ++ E
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQI------CE 128
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+AYLH IHR++ N+LLD D KI DFGLA+
Sbjct: 129 GMAYLHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+K++ +T E++L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ + L F+ D + + + + +GLA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-SMDLKDFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 126 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 168
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+ +G+G G V +G G VAVK F E ++++ + H NLV+LLG
Sbjct: 18 QTIGKGEFGDVMLGDY-RGNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 337 IEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+E L +V EY+ SL ++ + ++ +L + L E + YL G + +
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---FV 130
Query: 396 HRDIKTSNILLDKDFTPKIADFGLAR 421
HRD+ N+L+ +D K++DFGL +
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTK 156
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 276 SKKLGQGGAGSVYMGSLPNGTT------VAVKRLIFNTRQWVDEFFNEVNLISSIEHKNL 329
++LG+G G V++ N + VAVK L T +F E L+++++H+++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKL-------------LNWNKRFNII 376
VK G +G ++V+EY+ + L++F+ + L ++ +I
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 377 LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
A G+ YL + +HRD+ T N L+ + KI DFG++R
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+ ++ +T E++L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 165
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNL 329
F +K+G+G G VY + G VA+ ++ +T E++L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
VKLL + LV+E++ ++ L +F+ D + + + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD-RTHVSTAV 434
R++HRD+K N+L++ + K+ADFGLAR F RT+ V
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F+ + LG+G G+VY+ + +++F T + V+ + EV + S + H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQFI-FDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA--------TYITELANAL 125
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL + KIADFG + + R T + GTL
Sbjct: 126 SYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTL 174
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+ +G+G G V +G G VAVK F E ++++ + H NLV+LLG
Sbjct: 12 QTIGKGEFGDVMLGDY-RGNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 337 IEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
+E L +V EY+ SL ++ + ++ +L + L E + YL G + +
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---FV 124
Query: 396 HRDIKTSNILLDKDFTPKIADFGLAR 421
HRD+ N+L+ +D K++DFGL +
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTK 150
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
LG+G G VY G L N +A+K + ++ E+ L ++HKN+V+ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 338 EGPESLLVYEYVPNRSLDQFIFDK------NKTKLLNWNKRFNIILGTAEGLAYLHGGSE 391
E + E VP SL + K N+ + + K+ EGL YLH +
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI------LEGLKYLH---D 140
Query: 392 TRIIHRDIKTSNILLDK-DFTPKIADFGLARCFAA 425
+I+HRDIK N+L++ KI+DFG ++ A
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 19/160 (11%)
Query: 272 YFNPSKKLGQG--GAGSVYMGSLPN---GTTVAVKRLIFNT-RQWVDEFFNEVNLISSIE 325
Y + LG+G G S+Y N G VAVK L + Q + E++++ ++
Sbjct: 15 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY 74
Query: 326 HKNLVKLLGC-SIEGPESL-LVYEYVPNRSLDQFIFDKN--KTKLLNWNKRFNIILGTAE 381
H++++K GC +G +SL LV EYVP SL ++ + +LL + ++ E
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQI------CE 128
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+AYLH IHR++ N+LLD D KI DFGLA+
Sbjct: 129 GMAYLHS---QHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEV 318
E A S++LGQG G VY G T VA+K + + R+ + EF NE
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEA 69
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNK 371
+++ ++V+LLG +G +L++ E + RSL + + + +K
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 129
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A+G+AYL+ + +HRD+ N ++ +DFT KI DFG+ R
Sbjct: 130 MIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 19/176 (10%)
Query: 261 FKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVD 312
F + E A S++LGQG G VY G T VA+K + + R+ +
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI- 64
Query: 313 EFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTK 365
EF NE +++ ++V+LLG +G +L++ E + RSL + +
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ +K + A+G+AYL+ + +HRD+ N ++ +DFT KI DFG+ R
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 272 YFNPSKKLGQGGAGSVYMGSL--PNGTTV--AVKRL--IFNTRQWVDEFFNEVNLISSIE 325
+FN + +G+G G VY G+L +G + AVK L I + + V +F E ++
Sbjct: 92 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFS 148
Query: 326 HKNLVKLLGCSIEGPES-LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++ LLG + S L+V Y+ + L FI +N+T L A+G+
Sbjct: 149 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 206
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+L + + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 207 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
LG+G G VY G L N +A+K + ++ E+ L ++HKN+V+ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 338 EGPESLLVYEYVPNRSLDQFIFDK------NKTKLLNWNKRFNIILGTAEGLAYLHGGSE 391
E + E VP SL + K N+ + + K+ EGL YLH +
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI------LEGLKYLH---D 126
Query: 392 TRIIHRDIKTSNILLDK-DFTPKIADFGLARCFAA 425
+I+HRDIK N+L++ KI+DFG ++ A
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 161
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 272 YFNPSKKLGQGGAGSVYMGSL--PNGTTV--AVKRL--IFNTRQWVDEFFNEVNLISSIE 325
+FN + +G+G G VY G+L +G + AVK L I + + V +F E ++
Sbjct: 38 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFS 94
Query: 326 HKNLVKLLGCSIEGPES-LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++ LLG + S L+V Y+ + L FI +N+T L A+G+
Sbjct: 95 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 152
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+L + + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 153 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 272 YFNPSKKLGQGGAGSVYMGSL--PNGTTV--AVKRL--IFNTRQWVDEFFNEVNLISSIE 325
+FN + +G+G G VY G+L +G + AVK L I + + V +F E ++
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFS 89
Query: 326 HKNLVKLLGCSIEGPES-LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++ LLG + S L+V Y+ + L FI +N+T L A+G+
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 147
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+L + + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEV 318
E A S++LGQG G VY G T VA+K + + R+ + EF NE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEA 79
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNK 371
+++ ++V+LLG +G +L++ E + RSL + + + +K
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 139
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A+G+AYL+ + +HRD+ N ++ +DFT KI DFG+ R
Sbjct: 140 MIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 272 YFNPSKKLGQGGAGSVYMGSL--PNGTTV--AVKRL--IFNTRQWVDEFFNEVNLISSIE 325
+FN + +G+G G VY G+L +G + AVK L I + + V +F E ++
Sbjct: 34 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFS 90
Query: 326 HKNLVKLLGCSIEGPES-LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++ LLG + S L+V Y+ + L FI +N+T L A+G+
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 148
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+L + + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 272 YFNPSKKLGQGGAGSVYMGSL--PNGTTV--AVKRL--IFNTRQWVDEFFNEVNLISSIE 325
+FN + +G+G G VY G+L +G + AVK L I + + V +F E ++
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFS 89
Query: 326 HKNLVKLLGCSIEGPES-LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++ LLG + S L+V Y+ + L FI +N+T L A+G+
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 147
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+L + + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 272 YFNPSKKLGQGGAGSVYMGSL--PNGTTV--AVKRL--IFNTRQWVDEFFNEVNLISSIE 325
+FN + +G+G G VY G+L +G + AVK L I + + V +F E ++
Sbjct: 31 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFS 87
Query: 326 HKNLVKLLGCSIEGPES-LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++ LLG + S L+V Y+ + L FI +N+T L A+G+
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 145
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+L + + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 146 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEV 318
E A S++LGQG G VY G T VA+K + + R+ + EF NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEA 72
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNK 371
+++ ++V+LLG +G +L++ E + RSL + + + +K
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A+G+AYL+ + +HRD+ N ++ +DFT KI DFG+ R
Sbjct: 133 MIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 272 YFNPSKKLGQGGAGSVYMGSL--PNGTTV--AVKRL--IFNTRQWVDEFFNEVNLISSIE 325
+FN + +G+G G VY G+L +G + AVK L I + + V +F E ++
Sbjct: 34 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGIIMKDFS 90
Query: 326 HKNLVKLLGCSIEGPES-LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++ LLG + S L+V Y+ + L FI +N+T L A+G+
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMK 148
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+L + + +HRD+ N +LD+ FT K+ADFGLAR
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEV 318
E A S++LGQG G VY G T VA+K + + R+ + EF NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEA 73
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNK 371
+++ ++V+LLG +G +L++ E + RSL + + + +K
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A+G+AYL+ + +HRD+ N ++ +DFT KI DFG+ R
Sbjct: 134 MIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEV 318
E A S++LGQG G VY G T VA+K + + R+ + EF NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEA 73
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNK 371
+++ ++V+LLG +G +L++ E + RSL + + + +K
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A+G+AYL+ + +HRD+ N ++ +DFT KI DFG+ R
Sbjct: 134 MIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEV 318
E A S++LGQG G VY G T VA+K + + R+ + EF NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEA 72
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNK 371
+++ ++V+LLG +G +L++ E + RSL + + + +K
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A+G+AYL+ + +HRD+ N ++ +DFT KI DFG+ R
Sbjct: 133 MIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 15/155 (9%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQW----VDEFFNEVNLISSIEHKNLVK 331
K +G+G V + + G VA+K I + Q + + F EV ++ + H N+VK
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIK--IIDKTQLNPTSLQKLFREVRIMKILNHPNIVK 78
Query: 332 LLGCSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
L IE ++L L+ EY + ++ + K +F I+ + Y H
Sbjct: 79 LFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ---YCH--- 131
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAA 425
+ RI+HRD+K N+LLD D KIADFG + F
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEV 318
E A S++LGQG G VY G T VA+K + + R+ + EF NE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEA 64
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNK 371
+++ ++V+LLG +G +L++ E + RSL + + + +K
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 124
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A+G+AYL+ + +HRD+ N ++ +DFT KI DFG+ R
Sbjct: 125 MIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEV 318
E A S++LGQG G VY G T VA+K + + R+ + EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEA 66
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNK 371
+++ ++V+LLG +G +L++ E + RSL + + + +K
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A+G+AYL+ + +HRD+ N ++ +DFT KI DFG+ R
Sbjct: 127 MIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 15/155 (9%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQW----VDEFFNEVNLISSIEHKNLVK 331
K +G+G V + + G VA+K I + Q + + F EV ++ + H N+VK
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIK--IIDKTQLNPTSLQKLFREVRIMKILNHPNIVK 75
Query: 332 LLGCSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
L IE ++L L+ EY + ++ + K +F I+ + Y H
Sbjct: 76 LFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ---YCH--- 128
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAA 425
+ RI+HRD+K N+LLD D KIADFG + F
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 163
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 12/157 (7%)
Query: 278 KLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKL 332
+LG+G GSV + G VAVK+L + +F E+ ++ ++ +VK
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 333 LGCSIEG--PESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
G S PE LV EY+P+ L F+ + L+ ++ +G+ YL GS
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--GS 129
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
R +HRD+ NIL++ + KIADFGLA+ D+
Sbjct: 130 R-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 165
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTR-QWVDEFFNEVNLISSIEHKNLV 330
+ LG+G G V + G VAVK L + + + E+ ++ ++ H+N+V
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 331 KLLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG 388
K G C+ +G + L+ E++P+ SL +++ KNK K+ N ++ + +G+ YL
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKI-NLKQQLKYAVQICKGMDYL-- 142
Query: 389 GSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
GS + +HRD+ N+L++ + KI DFGL + D+
Sbjct: 143 GSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 277 KKLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTR-QWVDEFFNEVNLISSIEHKNLV 330
+ LG+G G V + G VAVK L + + + E+ ++ ++ H+N+V
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 331 KLLG-CSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG 388
K G C+ +G + L+ E++P+ SL +++ KNK K+ N ++ + +G+ YL
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKI-NLKQQLKYAVQICKGMDYL-- 130
Query: 389 GSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
GS + +HRD+ N+L++ + KI DFGL + D+
Sbjct: 131 GSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 168
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEV 318
E A S++LGQG G VY G T VA+K + + R+ + EF NE
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEA 101
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNK 371
+++ ++V+LLG +G +L++ E + RSL + + + +K
Sbjct: 102 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 161
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A+G+AYL+ + +HRD+ N ++ +DFT KI DFG+ R
Sbjct: 162 MIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEV 318
E A S++LGQG G VY G T VA+K + + R+ + EF NE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEA 79
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNK 371
+++ ++V+LLG +G +L++ E + RSL + + + +K
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 139
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A+G+AYL+ + +HRD+ N ++ +DFT KI DFG+ R
Sbjct: 140 MIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 36/189 (19%)
Query: 254 MKKSCLSFKYETLEKATNYFNPSKKLGQ-----GGAGSVYMGSLPN--GTTVAVKRL--I 304
M KS + ++ ++E A + F K+ Q GA + + G VAVK+L
Sbjct: 1 MSKSKVDNQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP 60
Query: 305 FNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF------- 357
F + + E+ L+ + HKN++ LL + P ++L++F
Sbjct: 61 FQNQTHAKRAYRELVLLKCVNHKNIISLLNV------------FTPQKTLEEFQDVYLVM 108
Query: 358 -IFDKNKTKLLNW---NKRFNIILGTAE-GLAYLHGGSETRIIHRDIKTSNILLDKDFTP 412
+ D N ++++ ++R + +L G+ +LH IIHRD+K SNI++ D T
Sbjct: 109 ELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTL 165
Query: 413 KIADFGLAR 421
KI DFGLAR
Sbjct: 166 KILDFGLAR 174
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F+ + LG+G G+VY+ + +++F T + V+ + EV + S + H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQFI-FDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA--------TYITELANAL 125
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
+Y H R+IHRDIK N+LL + KIADFG +
Sbjct: 126 SYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWS 159
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 278 KLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKL 332
+LG+G GSV + G VAVK+L + +F E+ ++ ++ +VK
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 333 LGCSI-EGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
G S G +SL LV EY+P+ L F+ + L+ ++ +G+ YL GS
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--GS 145
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGT 437
R +HRD+ NIL++ + KIADFGLA+ D+ + G
Sbjct: 146 R-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 191
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 278 KLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKL 332
+LG+G GSV + G VAVK+L + +F E+ ++ ++ +VK
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 333 LGCSI-EGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
G S G +SL LV EY+P+ L F+ + L+ ++ +G+ YL GS
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--GS 133
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGT 437
R +HRD+ NIL++ + KIADFGLA+ D+ + G
Sbjct: 134 R-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 179
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 273 FNPSKKLGQGGAGSVYMGS-LPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F KK+G+G VY + L +G VA+K++ + + + D E++L+ + H
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD-CIKEIDLLKQLNHP 92
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFI--FDKNKTKLLNWNKRFNIILGTAEGLAY 385
N++K IE E +V E L + I F K K +L+ + + L +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQK-RLIPERTVWKYFVQLCSALEH 151
Query: 386 LHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGT 437
+H R++HRDIK +N+ + K+ D GL R F++ +T + ++ GT
Sbjct: 152 MHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-KTTAAHSLVGT 199
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 21/180 (11%)
Query: 248 GLYATSMKKSCLSFKYETLEKATNYFNPSK------KLGQGGAGSVYMGSLPNGTTVAVK 301
LY SMK+ E T NP +LG G G VY + +A
Sbjct: 17 NLYFQSMKQ---------YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAA 67
Query: 302 RLI-FNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFD 360
++I + + ++++ E+++++S +H N+VKLL ++ E+ ++D + +
Sbjct: 68 KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 361 KNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
+ L ++ + T + L YLH + +IIHRD+K NIL D K+ADFG++
Sbjct: 128 LERP--LTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 278 KLGQGGAGSVYMGSLP-----NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKL 332
+LG+G GSV + G VAVK+L + +F E+ ++ ++ +VK
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 333 LGCSI-EGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
G S G +SL LV EY+P+ L F+ + L+ ++ +G+ YL GS
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYL--GS 132
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGT 437
R +HRD+ NIL++ + KIADFGLA+ D+ + G
Sbjct: 133 R-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 178
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 21/180 (11%)
Query: 248 GLYATSMKKSCLSFKYETLEKATNYFNPSK------KLGQGGAGSVYMGSLPNGTTVAVK 301
LY SMK+ E T NP +LG G G VY + +A
Sbjct: 17 NLYFQSMKQ---------YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAA 67
Query: 302 RLI-FNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFD 360
++I + + ++++ E+++++S +H N+VKLL ++ E+ ++D + +
Sbjct: 68 KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 361 KNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
+ L ++ + T + L YLH + +IIHRD+K NIL D K+ADFG++
Sbjct: 128 LERP--LTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 21/180 (11%)
Query: 248 GLYATSMKKSCLSFKYETLEKATNYFNPSK------KLGQGGAGSVYMGSLPNGTTVAVK 301
LY SMK+ E T NP +LG G G VY + +A
Sbjct: 17 NLYFQSMKQ---------YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAA 67
Query: 302 RLI-FNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFD 360
++I + + ++++ E+++++S +H N+VKLL ++ E+ ++D + +
Sbjct: 68 KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 361 KNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
+ L ++ + T + L YLH + +IIHRD+K NIL D K+ADFG++
Sbjct: 128 LERP--LTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL-------PNGTT-VAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V + PN T VAVK L + T + + + +E+ ++ I +H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDK-------------NKTKLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ + N + L+
Sbjct: 94 KNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ +D KIADFGLAR
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL-------PNGTT-VAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V + PN T VAVK L + T + + + +E+ ++ I +H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDK-------------NKTKLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ + N + L+
Sbjct: 94 KNIINLLGACTQDGPLYVIV-EYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ +D KIADFGLAR
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 80/175 (45%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 122
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + C A + T ++GTL
Sbjct: 123 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS-CHAP--SSRRTTLSGTL 171
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL-------PNGTT-VAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V + PN T VAVK L + T + + + +E+ ++ I +H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDK-------------NKTKLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ + N + L+
Sbjct: 94 KNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ +D KIADFGLAR
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL-------PNGTT-VAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V + PN T VAVK L + T + + + +E+ ++ I +H
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDK-------------NKTKLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ + N + L+
Sbjct: 87 KNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ +D KIADFGLAR
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL-------PNGTT-VAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V + PN T VAVK L + T + + + +E+ ++ I +H
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDK-------------NKTKLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ + N + L+
Sbjct: 79 KNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ +D KIADFGLAR
Sbjct: 138 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL-------PNGTT-VAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V + PN T VAVK L + T + + + +E+ ++ I +H
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDK-------------NKTKLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ + N + L+
Sbjct: 83 KNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ +D KIADFGLAR
Sbjct: 142 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL-------PNGTT-VAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V + PN T VAVK L + T + + + +E+ ++ I +H
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDK-------------NKTKLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ + N + L+
Sbjct: 86 KNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ +D KIADFGLAR
Sbjct: 145 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 9/138 (6%)
Query: 293 PNGTTVAVKRLIFNTRQW-VDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN 351
P VA+KR+ Q +DE E+ +S H N+V + E LV + +
Sbjct: 33 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 92
Query: 352 RSLDQFIFD-----KNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILL 406
S+ I ++K+ +L+ + I+ EGL YLH + IHRD+K NILL
Sbjct: 93 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 149
Query: 407 DKDFTPKIADFGLARCFA 424
+D + +IADFG++ A
Sbjct: 150 GEDGSVQIADFGVSAFLA 167
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 34/163 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIIL-GT 379
LL + P ++L++F + D N +++ ++R + +L
Sbjct: 88 LLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 135
Query: 380 AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARC 422
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART 175
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEV 318
E A S++LGQG G VY G T VA+K + + R+ + EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLNEA 66
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNK 371
+++ ++V+LLG +G +L++ E + RSL + + + +K
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A+G+AYL+ + +HRD+ N + +DFT KI DFG+ R
Sbjct: 127 MIQMAGEIADGMAYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + AEG
Sbjct: 74 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEG 126
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 127 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 168
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 26/168 (15%)
Query: 277 KKLGQGGAGSVYMGSL-------PNGTT-VAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V + PN T VAVK L + T + + + +E+ ++ I +H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 327 KNLVKLLG-CSIEGPESLLVY--------EYVPNRSLD--QFIFDK--NKTKLLNWNKRF 373
KN++ LLG C+ +GP ++V EY+ R +F F+ N + L+
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 374 NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ +D KIADFGLAR
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Query: 293 PNGTTVAVKRLIFNTRQW-VDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN 351
P VA+KR+ Q +DE E+ +S H N+V + E LV + +
Sbjct: 38 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97
Query: 352 RSLDQFIFD-----KNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILL 406
S+ I ++K+ +L+ + I+ EGL YLH + IHRD+K NILL
Sbjct: 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 154
Query: 407 DKDFTPKIADFGLARCFAA----DRTHVSTAVAGT 437
+D + +IADFG++ A R V GT
Sbjct: 155 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 17/177 (9%)
Query: 259 LSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSL--PNGTT--VAVK--RLIFNTRQWVD 312
L K E + N K LG+G GSV G+L +GT+ VAVK +L ++++ ++
Sbjct: 22 LQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIE 81
Query: 313 EFFNEVNLISSIEHKNLVKLLGCSIEG-----PESLLVYEYVPNRSLDQFI-FDKNKT-- 364
EF +E + H N+++LLG IE P+ +++ ++ L ++ + + +T
Sbjct: 82 EFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGP 141
Query: 365 KLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
K + ++ A G+ YL S +HRD+ N +L D T +ADFGL++
Sbjct: 142 KHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRL-IFNTRQWVD-EFFNEVNLI---S 322
AT+ + P ++G G G+VY P+ G VA+K + + N + + EV L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 323 SIEHKNLVKLLG-CSIEGPES----LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
+ EH N+V+L+ C+ + LV+E+V ++ L ++ DK L +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
GL +LH I+HRD+K NIL+ T K+ADFGLAR ++
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 33/186 (17%)
Query: 277 KKLGQGGAGSV------YMGSLPNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSIEHKNL 329
K LG+G G V ++ TTVAVK L N + + + +E N++ + H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 330 VKLLG-CSIEGPESLLVYEYVPNRSLDQFI---------------------FDKNKTKLL 367
+KL G CS +GP LL+ EY SL F+ D + L
Sbjct: 89 IKLYGACSQDGP-LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 368 NWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ ++G+ YL +E +++HRD+ NIL+ + KI+DFGL+R +
Sbjct: 148 TMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 428 THVSTA 433
++V +
Sbjct: 205 SYVKRS 210
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL-------PNGTT-VAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V + PN T VAVK L + T + + + +E+ ++ I +H
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDK-------------NKTKLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ + N + L+
Sbjct: 135 KNIINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ +D KIADFGLAR
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 34/163 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIIL-GT 379
LL + P ++L++F + D N +++ ++R + +L
Sbjct: 88 LLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 135
Query: 380 AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARC 422
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART 175
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 272 YFNPSKKLGQG--GAGSVYMGSLPN---GTTVAVKRLIFNT-RQWVDEFFNEVNLISSIE 325
Y + LG+G G S+Y N G VAVK L Q + E+ ++ ++
Sbjct: 9 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY 68
Query: 326 HKNLVKLLGC-SIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
H+++VK GC +G +S+ LV EYVP SL ++ + + EG+
Sbjct: 69 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGM 124
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
AYLH IHR + N+LLD D KI DFGLA+
Sbjct: 125 AYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAK 159
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 30/160 (18%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVKLL 333
K +G G G V G VAVK+L F + + E+ L+ + HKN++ LL
Sbjct: 28 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 87
Query: 334 GCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTAE- 381
+ P ++L++F + D N ++++ ++R + +L
Sbjct: 88 NV------------FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLC 135
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 34/163 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 23 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIIL-GT 379
LL + P ++L++F + D N +++ ++R + +L
Sbjct: 81 LLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 128
Query: 380 AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARC 422
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 129 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART 168
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 272 YFNPSKKLGQG--GAGSVYMGSLPN---GTTVAVKRLIFNT-RQWVDEFFNEVNLISSIE 325
Y + LG+G G S+Y N G VAVK L Q + E+ ++ ++
Sbjct: 10 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY 69
Query: 326 HKNLVKLLGC-SIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
H+++VK GC +G +S+ LV EYVP SL ++ + + EG+
Sbjct: 70 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGM 125
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
AYLH IHR + N+LLD D KI DFGLA+
Sbjct: 126 AYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAK 160
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 124
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R T + GTL
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 173
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 124
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R T + GTL
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 173
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ N + +++F + V+ + EV + S + H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 121
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H ++IHRDIK N+LL KIADFG + + R A+ GTL
Sbjct: 122 SYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTL 170
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 10/153 (6%)
Query: 279 LGQGGAGSVYMG--SLPNGTT--VAVKRLIFN-TRQWVDEFFNEVNLISSIEHKNLVKLL 333
+G G G V G LP VA+K L T + +F +E +++ +H N++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G + +++ E++ N SLD F+ + + ++ G A G+ YL ++
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTVIQLVGMLRGIAAGMKYL---ADMN 155
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
+HRD+ NIL++ + K++DFGL+R D
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 111 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 163
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 164 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 204
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 126
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R T + GTL
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 175
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 121
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R T + GTL
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 170
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 125
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R T + GTL
Sbjct: 126 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 174
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 124
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R A+ GTL
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTL 173
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 121
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R A+ GTL
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTL 170
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRL-IFNTRQWVD-EFFNEVNLI---S 322
AT+ + P ++G G G+VY P+ G VA+K + + N + + EV L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 323 SIEHKNLVKLLG-CSIEGPES----LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
+ EH N+V+L+ C+ + LV+E+V ++ L ++ DK L +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
GL +LH I+HRD+K NIL+ T K+ADFGLAR ++
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRL-IFNTRQWVD-EFFNEVNLI---S 322
AT+ + P ++G G G+VY P+ G VA+K + + N + + EV L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 323 SIEHKNLVKLLG-CSIEGPES----LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
+ EH N+V+L+ C+ + LV+E+V ++ L ++ DK L +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
GL +LH I+HRD+K NIL+ T K+ADFGLAR ++
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQW----VDEFFNEVNLISSIEHKNLVK 331
K +G+G V + + G VAVK I + Q + + F EV ++ + H N+VK
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVK--IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 332 LLGCSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
L IE ++L LV EY + ++ + K +F I+ + Y H
Sbjct: 78 LFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCH--- 130
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
+ I+HRD+K N+LLD D KIADFG + F
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 121
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R T + GTL
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTELCGTL 170
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 34/163 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIIL-GT 379
LL + P +SL++F + D N ++++ ++R + +L
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 380 AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARC 422
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 120
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R T + GTL
Sbjct: 121 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 169
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 34/163 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIIL-GT 379
LL + P +SL++F + D N ++++ ++R + +L
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 380 AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARC 422
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 10/148 (6%)
Query: 278 KLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-EFFNEVNLISSIEHKNLVKLLGC 335
KLG+G +VY G S VA+K + + EV+L+ ++H N+V L
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 336 SIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
I +SL LV+EY+ ++ L Q++ D ++N + + GLAY H ++
Sbjct: 69 -IHTEKSLTLVFEYL-DKDLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCH---RQKV 121
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARC 422
+HRD+K N+L+++ K+ADFGLAR
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARA 149
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 126
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R T + GTL
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 175
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 34/163 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 30 KPIGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIIL-GT 379
LL + P +SL++F + D N ++++ ++R + +L
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 380 AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARC 422
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 79/187 (42%), Gaps = 24/187 (12%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVY------MGSLPNGTTVAVKRLIFNTRQWVDE---F 314
E E N K LG G G V +G VAVK L + DE
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML--KSTAHADEKEAL 96
Query: 315 FNEVNLISSI-EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
+E+ ++S + +H+N+V LLG G L++ EY L F+ + K+++L + F
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAF 154
Query: 374 NIILGTAEGLAYLHGGSET----------RIIHRDIKTSNILLDKDFTPKIADFGLARCF 423
I TA LH S+ IHRD+ N+LL KI DFGLAR
Sbjct: 155 AIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 214
Query: 424 AADRTHV 430
D ++
Sbjct: 215 MNDSNYI 221
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 15/153 (9%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQW----VDEFFNEVNLISSIEHKNLVK 331
K +G+G V + + G VAVK I + Q + + F EV ++ + H N+VK
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVK--IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 332 LLGCSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
L IE ++L LV EY + ++ + K +F I+ + Y H
Sbjct: 78 LFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCH--- 130
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCF 423
+ I+HRD+K N+LLD D KIADFG + F
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF 163
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 278 KLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQW--VDEFFNEVNLISSIEHKNLVKLLG 334
KLG+G G VY TVA+KR+ + EV+L+ ++H+N+++L
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 335 CSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
L++EY N L +++ DKN + K F + G+ + H R
Sbjct: 101 VIHHNHRLHLIFEYAEN-DLKKYM-DKNPDVSMRVIKSF--LYQLINGVNFCHS---RRC 153
Query: 395 IHRDIKTSNILL---DKDFTP--KIADFGLARCF 423
+HRD+K N+LL D TP KI DFGLAR F
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL--------PNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V M TVAVK L + T + + + +E+ ++ I +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFI-----------FDKNKT--KLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ +D N+ + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ ++ KIADFGLAR
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQW----VDEFFNEVNLISSIEHKNLVK 331
K +G+G V + + G VAVK I + Q + + F EV ++ + H N+VK
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVK--IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 77
Query: 332 LLGCSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
L IE ++L LV EY + ++ + K +F I+ + Y H
Sbjct: 78 LFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCH--- 130
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
+ I+HRD+K N+LLD D KIADFG + F
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTR---QWVDEFFNEVNLISSIEHKNLVKL 332
K +G+G V + + G VAV R+I T+ + + F EV ++ + H N+VKL
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAV-RIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 333 LGCSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSE 391
IE ++L LV EY + ++ + K +F I+ + Y H +
Sbjct: 79 FEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCH---Q 131
Query: 392 TRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
I+HRD+K N+LLD D KIADFG + F
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 121
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R T + GTL
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGTL 170
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTR---QWVDEFFNEVNLISSIEHKNLVKL 332
K +G+G V + + G VAV R+I T+ + + F EV ++ + H N+VKL
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAV-RIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 333 LGCSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSE 391
IE ++L LV EY + ++ + K +F I+ + Y H +
Sbjct: 79 FEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCH---Q 131
Query: 392 TRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
I+HRD+K N+LLD D KIADFG + F
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 164
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 138
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R T + GTL
Sbjct: 139 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 187
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 121
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R T + GTL
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTL 170
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRL---IFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
LG+G VY S+ G VA+K + V NEV + ++H ++++L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 335 CSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
+ LV E N +++++ KN+ K + N+ + + G+ YLH I
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYL--KNRVKPFSENEARHFMHQIITGMLYLHSHG---I 133
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLA 420
+HRD+ SN+LL ++ KIADFGLA
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLA 159
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 126
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R T + GTL
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTL 175
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 312 DEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSL---DQ--FIFDKNKTKL 366
D+F NE+ +I+ I+++ + G E ++YEY+ N S+ D+ F+ DKN T
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFG 418
+ II +Y+H E I HRD+K SNIL+DK+ K++DFG
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFG 197
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL--------PNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V M TVAVK L + T + + + +E+ ++ I +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFI-----------FDKNKT--KLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ +D N+ + + +
Sbjct: 101 KNIIHLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ ++ KIADFGLAR
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 33/174 (18%)
Query: 277 KKLGQGGAGSV------YMGSLPNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSIEHKNL 329
K LG+G G V ++ TTVAVK L N + + + +E N++ + H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 330 VKLLG-CSIEGPESLLVYEYVPNRSLDQFI---------------------FDKNKTKLL 367
+KL G CS +GP LL+ EY SL F+ D + L
Sbjct: 89 IKLYGACSQDGP-LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 368 NWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ ++G+ YL +E +++HRD+ NIL+ + KI+DFGL+R
Sbjct: 148 TMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 329 LVKLLGCSIEGPESLLVYEYVPN----RSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P + L + FD+ +T I A L
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA--------TYITELANAL 126
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R T + GTL
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 175
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 122
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R T + GTL
Sbjct: 123 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTL 171
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 34/163 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P ++L++F + D N +++ ++R + +L
Sbjct: 88 LLNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQM 135
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARC 422
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART 175
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQW----VDEFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + + EV + S + H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 121
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R T + GTL
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTL 170
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL--------PNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V M TVAVK L + T + + + +E+ ++ I +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFI-----------FDKNKT--KLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ +D N+ + + +
Sbjct: 101 KNIITLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ ++ KIADFGLAR
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL--------PNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V M TVAVK L + T + + + +E+ ++ I +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFI-----------FDKNKT--KLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ +D N+ + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ ++ KIADFGLAR
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 118
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R T + GTL
Sbjct: 119 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 167
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 277 KKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKN 328
++LGQG G VY G+ + T VAVK + + R+ + EF NE +++ +
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHH 80
Query: 329 LVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNKRFNIILGTAE 381
+V+LLG +G +L+V E + + RSL + + + A+
Sbjct: 81 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+AYL+ + +HRD+ N ++ DFT KI DFG+ R
Sbjct: 141 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L++ + +P L ++ + LLNW + A+G
Sbjct: 78 PHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKG 130
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 131 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 172
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYM----GSLPNGTTVAVKRLI-FNTRQWVDEF-FN 316
++++EK N LG G GS M + G VA+K+ + + + V +
Sbjct: 21 FQSMEKYEN-------LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR 73
Query: 317 EVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNII 376
E+ L+ + H+NLV LL + LV+E+V + LD N L++ +
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYL 130
Query: 377 LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAA 425
G+ + H + IIHRDIK NIL+ + K+ DFG AR AA
Sbjct: 131 FQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L++ + +P L ++ + LLNW + A+G
Sbjct: 80 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 133 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 280 GQGGAGSVYMGSLPNGTTVAVKRLIFNTRQ-WVDEFFNEVNLISSIEHKNLVKLLGCSIE 338
+G G V+ L N VAVK +Q W E E+ ++H+NL++ +
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQSE--REIFSTPGMKHENLLQFIAAEKR 80
Query: 339 GP----ESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG------ 388
G E L+ + SL ++ K ++ WN+ ++ + GL+YLH
Sbjct: 81 GSNLEVELWLITAFHDKGSLTDYL----KGNIITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 389 --GSETRIIHRDIKTSNILLDKDFTPKIADFGLARCF 423
G + I HRD K+ N+LL D T +ADFGLA F
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRF 173
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 34/163 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIG 87
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P +SL++F + D N ++++ ++R + +L
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARC 422
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L++ + +P L ++ + LLNW + A+G
Sbjct: 81 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 133
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 134 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 175
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL--------PNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V M TVAVK L + T + + + +E+ ++ I +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFI-----------FDKNKT--KLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ +D N+ + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ ++ KIADFGLAR
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L++ + +P L ++ + LLNW + A+G
Sbjct: 79 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 132 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL--------PNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V M TVAVK L + T + + + +E+ ++ I +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFI-----------FDKNKT--KLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ +D N+ + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ ++ KIADFGLAR
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L++ + +P L ++ + LLNW + A+G
Sbjct: 78 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 130
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 131 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 172
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L++ + +P L ++ + LLNW + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 130 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 277 KKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKN 328
++LGQG G VY G+ + T VAVK + + R+ + EF NE +++ +
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHH 81
Query: 329 LVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNKRFNIILGTAE 381
+V+LLG +G +L+V E + + RSL + + + A+
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+AYL+ + +HRD+ N ++ DFT KI DFG+ R
Sbjct: 142 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLL 333
+ LG+G AG V + ++ T AV I + ++ VD E+ + + H+N+VK
Sbjct: 12 QTLGEGAAGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G EG L EY L I + + F+ ++ G+ YLHG
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 124
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
I HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 147
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIADFG + + R T + GTL
Sbjct: 148 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 196
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 277 KKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKN 328
++LGQG G VY G+ + T VAVK + + R+ + EF NE +++ +
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHH 78
Query: 329 LVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNKRFNIILGTAE 381
+V+LLG +G +L+V E + + RSL + + + A+
Sbjct: 79 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 138
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+AYL+ + +HRD+ N ++ DFT KI DFG+ R
Sbjct: 139 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 34/163 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P +SL++F + D N ++++ ++R + +L
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARC 422
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART 175
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 130 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 71 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 123
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 124 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 277 KKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKN 328
++LGQG G VY G+ + T VAVK + + R+ + EF NE +++ +
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHH 81
Query: 329 LVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNKRFNIILGTAE 381
+V+LLG +G +L+V E + + RSL + + + A+
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+AYL+ + +HRD+ N ++ DFT KI DFG+ R
Sbjct: 142 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 277 KKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKN 328
++LGQG G VY G+ + T VAVK + + R+ + EF NE +++ +
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHH 81
Query: 329 LVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNKRFNIILGTAE 381
+V+LLG +G +L+V E + + RSL + + + A+
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+AYL+ + +HRD+ N ++ DFT KI DFG+ R
Sbjct: 142 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 133 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 130 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 77/184 (41%), Gaps = 22/184 (11%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVY------MGSLPNGTTVAVKRLIFNTRQWVDE---F 314
E E N K LG G G V +G VAVK L + DE
Sbjct: 31 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML--KSTAHADEKEAL 88
Query: 315 FNEVNLISSI-EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-------FDKNKTKL 366
+E+ ++S + +H+N+V LLG G L++ EY L F+ DK +
Sbjct: 89 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP 148
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L + A+G+A+L + IHRD+ N+LL KI DFGLAR D
Sbjct: 149 LELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 205
Query: 427 RTHV 430
++
Sbjct: 206 SNYI 209
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 277 KKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKN 328
++LGQG G VY G+ + T VAVK + + R+ + EF NE +++ +
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHH 81
Query: 329 LVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNKRFNIILGTAE 381
+V+LLG +G +L+V E + + RSL + + + A+
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+AYL+ + +HRD+ N ++ DFT KI DFG+ R
Sbjct: 142 GMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 276 SKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQW----VDEFFNEVNLISSIEHKNLV 330
K +G+G V + + G VAVK I + Q + + F EV ++ + H N+V
Sbjct: 20 QKTIGKGNFAKVKLARHVLTGREVAVK--IIDKTQLNPTSLQKLFREVRIMKILNHPNIV 77
Query: 331 KLLGCSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
KL IE ++L LV EY + ++ + K +F I+ + Y H
Sbjct: 78 KLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCH-- 131
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAA 425
+ I+HRD+K N+LLD D KIADFG + F
Sbjct: 132 -QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTV 166
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 83 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 135
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 136 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 177
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 133 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 80 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 133 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 84 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 137 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 79 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 132 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 77/184 (41%), Gaps = 22/184 (11%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVY------MGSLPNGTTVAVKRLIFNTRQWVDE---F 314
E E N K LG G G V +G VAVK L + DE
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML--KSTAHADEKEAL 96
Query: 315 FNEVNLISSI-EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-------FDKNKTKL 366
+E+ ++S + +H+N+V LLG G L++ EY L F+ DK +
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRP 156
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L + A+G+A+L + IHRD+ N+LL KI DFGLAR D
Sbjct: 157 LELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 213
Query: 427 RTHV 430
++
Sbjct: 214 SNYI 217
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIIS 87
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P ++L++F + D N +++ ++R + +L
Sbjct: 88 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 68 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P ++L++F + D N +++ ++R + +L
Sbjct: 126 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 173
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 174 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 130 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 87 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 139
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 140 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 180
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQW----VDEFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + + EV + S + H N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 124
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
+Y H R+IHRDIK N+LL KIADFG +
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P +SL++F + D N ++++ ++R + +L
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 278 KLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+LG G G VY + G A K + + + ++++ E+ ++++ +H +VKLLG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ ++ E+ P ++D + + ++ L + + E L +LH RIIH
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRG--LTEPQIQVVCRQMLEALNFLHS---KRIIH 140
Query: 397 RDIKTSNILLDKDFTPKIADFGLA 420
RD+K N+L+ + ++ADFG++
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 102 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 154
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 155 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 196
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 123
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
+Y H R+IHRDIK N+LL KIADFG +
Sbjct: 124 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS 157
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRLI--FNTRQWVDEFFNEVNLISSIE-HKNLVKL 332
KKLG+G G V+ G VAVK++ F F E+ +++ + H+N+V L
Sbjct: 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL 74
Query: 333 LGC--SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
L + + LV++Y+ L I + +L + ++ + + YLH G
Sbjct: 75 LNVLRADNDRDVYLVFDYMET-DLHAVI----RANILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
++HRD+K SNILL+ + K+ADFGL+R F R
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 82/190 (43%), Gaps = 30/190 (15%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVY------MGSLPNGTTVAVKRLIFNTRQWVDE---F 314
E E N K LG G G V +G VAVK L + DE
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML--KSTAHADEKEAL 96
Query: 315 FNEVNLISSI-EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
+E+ ++S + +H+N+V LLG G L++ EY L F+ + K+++L + F
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAF 154
Query: 374 NIILGT-------------AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
I T A+G+A+L + IHRD+ N+LL KI DFGLA
Sbjct: 155 AIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 421 RCFAADRTHV 430
R D ++
Sbjct: 212 RDIMNDSNYI 221
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 122
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
+Y H R+IHRDIK N+LL KIADFG +
Sbjct: 123 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 278 KLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
+LG G G VY + G A K + + + ++++ E+ ++++ +H +VKLLG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ ++ E+ P ++D + + ++ L + + E L +LH RIIH
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRG--LTEPQIQVVCRQMLEALNFLHS---KRIIH 132
Query: 397 RDIKTSNILLDKDFTPKIADFGLA 420
RD+K N+L+ + ++ADFG++
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVS 156
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 121
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
+Y H R+IHRDIK N+LL KIADFG +
Sbjct: 122 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL--------PNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V M TVAVK L + T + + + +E+ ++ I +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFI-----------FDKNKT--KLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ +D N+ + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ ++ +IADFGLAR
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL--------PNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V M TVAVK L + T + + + +E+ ++ I +H
Sbjct: 28 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFI-----------FDKNKT--KLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ +D N+ + + +
Sbjct: 88 KNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ ++ KIADFGLAR
Sbjct: 147 VSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLAR 192
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 68 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P ++L++F + D N +++ ++R + +L
Sbjct: 126 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 173
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 174 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL--------PNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V M TVAVK L + T + + + +E+ ++ I +H
Sbjct: 30 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFI-----------FDKNKT--KLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ +D N+ + + +
Sbjct: 90 KNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ ++ KIADFGLAR
Sbjct: 149 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 194
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL--------PNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V M TVAVK L + T + + + +E+ ++ I +H
Sbjct: 33 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFI-----------FDKNKT--KLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ +D N+ + + +
Sbjct: 93 KNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ ++ KIADFGLAR
Sbjct: 152 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 197
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 124
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
+Y H R+IHRDIK N+LL KIADFG +
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 33/174 (18%)
Query: 277 KKLGQGGAGSV------YMGSLPNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSIEHKNL 329
K LG+G G V ++ TTVAVK L N + + + +E N++ + H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 330 VKLLG-CSIEGPESLLVYEYVPNRSLDQFI---------------------FDKNKTKLL 367
+KL G CS +GP LL+ EY SL F+ D + L
Sbjct: 89 IKLYGACSQDGP-LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 368 NWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ ++G+ YL +E ++HRD+ NIL+ + KI+DFGL+R
Sbjct: 148 TMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 20/163 (12%)
Query: 277 KKLGQGGAGSVYMG-SLPNG----TTVAVKRLIFNTRQWVD-EFFNEVNLISSIEHKNLV 330
K LG G G+VY G +P+G VA+K L NT + E +E +++ + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 331 KLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEGLAYL 386
+LLG + L V + +P L + + LLNW + A+G++YL
Sbjct: 83 RLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSYL 135
Query: 387 HGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+ R++HRD+ N+L+ KI DFGLAR D T
Sbjct: 136 E---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 175
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 26/168 (15%)
Query: 277 KKLGQGGAGSVYMGSL--------PNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V M TVAVK L + T + + + +E+ ++ I +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 327 KNLVKLLG-CSIEGPESLLV--------YEYVPNRSLD--QFIFDKNKT--KLLNWNKRF 373
KN++ LLG C+ +GP ++V EY+ R ++ +D N+ + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 374 NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ ++ KIADFGLAR
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 28/169 (16%)
Query: 277 KKLGQGGAGSVYMGSL--------PNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V M TVAVK L + T + + + +E+ ++ I +H
Sbjct: 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 327 KNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFI-----------FDKNKT--KLLNWNKR 372
KN++ LLG C+ +GP ++V EY +L +++ +D N+ + + +
Sbjct: 147 KNIINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ ++ KIADFGLAR
Sbjct: 206 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 19/170 (11%)
Query: 269 ATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRL-IFNTRQWVDEF----FNEVNLI- 321
AT+ + P ++G G G+VY P+ G VA+K + + N EV L+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 322 --SSIEHKNLVKLLG-CSIEGPES----LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFN 374
+ EH N+V+L+ C+ + LV+E+V ++ L ++ DK L +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKD 124
Query: 375 IILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
++ GL +LH I+HRD+K NIL+ T K+ADFGLAR ++
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 171
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 31 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P ++L++F + D N +++ ++R + +L
Sbjct: 89 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 24 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P ++L++F + D N +++ ++R + +L
Sbjct: 82 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P ++L++F + D N +++ ++R + +L
Sbjct: 88 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 123
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIA+FG + + R T + GTL
Sbjct: 124 SYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTL 172
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVK---RLIFNTRQWVDEFFNEVNLISSIEHKNLVKL 332
K LG+G G V + G VA+K + + E++ + + H +++KL
Sbjct: 20 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 333 LGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSET 392
E ++V EY N D +I ++K + F I+ E Y H
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIISAVE---YCH---RH 132
Query: 393 RIIHRDIKTSNILLDKDFTPKIADFGLA 420
+I+HRD+K N+LLD+ KIADFGL+
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGLS 160
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P +SL++F + D N +++ ++R + +L
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVK---RLIFNTRQWVDEFFNEVNLISSIEHKNLVKL 332
K LG+G G V + G VA+K + + E++ + + H +++KL
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 333 LGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSET 392
E ++V EY N D +I ++K + F I+ E Y H
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIISAVE---YCH---RH 131
Query: 393 RIIHRDIKTSNILLDKDFTPKIADFGLA 420
+I+HRD+K N+LLD+ KIADFGL+
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLS 159
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 26/168 (15%)
Query: 277 KKLGQGGAGSVYMGSL--------PNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EH 326
K LG+G G V M TVAVK L + T + + + +E+ ++ I +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 327 KNLVKLLG-CSIEGPESLLV--------YEYVPNRSLD--QFIFDKNKT--KLLNWNKRF 373
KN++ LLG C+ +GP ++V EY+ R ++ +D N+ + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 374 NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A G+ YL + + IHRD+ N+L+ ++ KIADFGLAR
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P ++L++F + D N +++ ++R + +L
Sbjct: 88 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 23 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P ++L++F + D N +++ ++R + +L
Sbjct: 81 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 128
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 129 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 24 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 81
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P +SL++F + D N +++ ++R + +L
Sbjct: 82 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 124
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+Y H R+IHRDIK N+LL KIA+FG + + R T + GTL
Sbjct: 125 SYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTL 173
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 279 LGQGGAGSVYMGS-LPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
LG+G G V + P G VA+K++ F+ + E+ ++ +H+N++ + +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIF--N 76
Query: 337 IEGPESLLVYE--YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
I+ P+S + Y+ + + T++L+ + I T + LHG + +
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN---V 133
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCF---AADRTHVSTAVAG 436
IHRD+K SN+L++ + K+ DFGLAR AAD + + +G
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 279 LGQGGAGSVYMGS-LPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
LG+G G V + P G VA+K++ F+ + E+ ++ +H+N++ + +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIF--N 76
Query: 337 IEGPESLLVYE--YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
I+ P+S + Y+ + + T++L+ + I T + LHG + +
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN---V 133
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCF---AADRTHVSTAVAGTL 438
IHRD+K SN+L++ + K+ DFGLAR AAD + + +G +
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 35 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 92
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P +SL++F + D N +++ ++R + +L
Sbjct: 93 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 140
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 141 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 31 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P ++L++F + D N +++ ++R + +L
Sbjct: 89 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 24 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P ++L++F + D N +++ ++R + +L
Sbjct: 82 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVK---RLIFNTRQWVDEFFNEVNLISSIEHKNLVKL 332
K LG+G G V + G VA+K + + E++ + + H +++KL
Sbjct: 14 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 333 LGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSET 392
E ++V EY N D +I ++K + F I+ E Y H
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIISAVE---YCH---RH 126
Query: 393 RIIHRDIKTSNILLDKDFTPKIADFGLA 420
+I+HRD+K N+LLD+ KIADFGL+
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGLS 154
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 12/165 (7%)
Query: 279 LGQGGAGSVYMGS-LPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
LG+G G V + P G VA+K++ F+ + E+ ++ +H+N++ + +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIF--N 76
Query: 337 IEGPESLLVYE--YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
I+ P+S + Y+ + + T++L+ + I T + LHG + +
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN---V 133
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCF---AADRTHVSTAVAG 436
IHRD+K SN+L++ + K+ DFGLAR AAD + + +G
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P +SL++F + D N +++ ++R + +L
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 29 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 86
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P ++L++F + D N +++ ++R + +L
Sbjct: 87 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 134
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 135 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 329 LVKLLGCSIEGPESLLVYEYVPN----RSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P + L + FD+ +T I A L
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA--------TYITELANAL 126
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
+Y H R+IHRDIK N+LL KIADFG +
Sbjct: 127 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVK---RLIFNTRQWVDEFFNEVNLISSIEHKNLVKL 332
K LG+G G V + G VA+K + + E++ + + H +++KL
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 333 LGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSET 392
E ++V EY N D +I ++K + F I+ E Y H
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIISAVE---YCH---RH 122
Query: 393 RIIHRDIKTSNILLDKDFTPKIADFGLA 420
+I+HRD+K N+LLD+ KIADFGL+
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLS 150
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P +SL++F + D N +++ ++R + +L
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQW----VDEFFNEVNLISSIEHKNLVK 331
K +G+G V + + G VAVK I + Q + + F EV + + H N+VK
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVK--IIDKTQLNSSSLQKLFREVRIXKVLNHPNIVK 77
Query: 332 LLGCSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
L IE ++L LV EY + ++ + K +F I+ + Y H
Sbjct: 78 LFEV-IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ---YCH--- 130
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCF 423
+ I+HRD+K N+LLD D KIADFG + F
Sbjct: 131 QKFIVHRDLKAENLLLDADXNIKIADFGFSNEF 163
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P +SL++F + D N +++ ++R + +L
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 86/183 (46%), Gaps = 37/183 (20%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 25 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 80
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 81 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 128
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAA 425
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR A
Sbjct: 129 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184
Query: 426 DRT 428
+ T
Sbjct: 185 EMT 187
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLLGC 335
LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK G
Sbjct: 15 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 336 SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
EG L EY L I + + F+ ++ G+ YLHG I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IGIT 127
Query: 396 HRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 171
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 73/175 (41%), Gaps = 31/175 (17%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSIEHKNLV 330
F P + LG+GG G V+ + + A+KR+ R+ E EV ++ +EH +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 331 KLLGCSIE-------GPESLLVYEYVPNRSLDQFIFDKNKTKLLNW-NKR---------- 372
+ +E P S VY Y+ + K L +W N R
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLC-------RKENLKDWMNGRCTIEERERSV 119
Query: 373 -FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
+I L AE + +LH ++HRD+K SNI D K+ DFGL D
Sbjct: 120 CLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD 171
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 31 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 88
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P +SL++F + D N +++ ++R + +L
Sbjct: 89 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLLGC 335
LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK G
Sbjct: 14 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 336 SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
EG L EY L I + + F+ ++ G+ YLHG I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IGIT 126
Query: 396 HRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLLGC 335
LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK G
Sbjct: 14 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 336 SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
EG L EY L I + + F+ ++ G+ YLHG I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IGIT 126
Query: 396 HRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQW----VDEFFNEVNLISSIEHKNLVK 331
K +G+G V + + G VAVK I + Q + + F EV ++ + H N+VK
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVK--IIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 70
Query: 332 LLGCSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
L IE ++L LV EY + ++ K +F I+ + Y H
Sbjct: 71 LFEV-IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQ---YCH--- 123
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
+ I+HRD+K N+LLD D KIADFG + F
Sbjct: 124 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT 157
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 32 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 89
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P +SL++F + D N +++ ++R + +L
Sbjct: 90 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 137
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 138 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 176
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 34/162 (20%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
K +G G G V Y L VA+K+L F + + E+ L+ + HKN++
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQF--------IFDKNKTKLLNW---NKRFNIILGTA 380
LL + P +SL++F + D N +++ ++R + +L
Sbjct: 88 LLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 381 E-GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ +LH IIHRD+K SNI++ D T KI DFGLAR
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + V+ + EV + S + H N
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 329 LVKLLGCSIEGPESLLVYEYVP----NRSLDQF-IFDKNKTKLLNWNKRFNIILGTAEGL 383
+++L G + L+ EY P R L + FD+ +T I A L
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA--------TYITELANAL 147
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
+Y H R+IHRDIK N+LL KIADFG +
Sbjct: 148 SYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 33/182 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 82 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR A +
Sbjct: 130 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185
Query: 427 RT 428
T
Sbjct: 186 MT 187
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 33/182 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 82 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR A +
Sbjct: 130 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185
Query: 427 RT 428
T
Sbjct: 186 MT 187
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 216 VLSTTAFLMLSLFAAYAA-YARLSKM-KEDRNNLGLYATSMKKSCLSFKYETLEKATNYF 273
V S A + SL +++ A+L ++ E +N G+ T K YE E+ ++
Sbjct: 19 VSSGQAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKP---VDYEYREE-VHWM 74
Query: 274 NPSKKLGQGGAGSVY-MGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLIS--SIEHKNLV 330
+LG+G G V+ M G AVK++ E F L++ + +V
Sbjct: 75 THQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRL-------EVFRVEELVACAGLSSPRIV 127
Query: 331 KLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
L G EGP + E + SL Q I + L ++ + EGL YLH
Sbjct: 128 PLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLH--- 181
Query: 391 ETRIIHRDIKTSNILLDKDFT-PKIADFGLARCFAAD 426
RI+H D+K N+LL D + + DFG A C D
Sbjct: 182 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 218
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLL 333
+ LG+G G V + ++ T AV I + ++ VD E+ + + + H+N+VK
Sbjct: 13 QTLGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G EG L EY L I + + F+ ++ G+ YLHG
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 125
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
I HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 105/255 (41%), Gaps = 41/255 (16%)
Query: 180 FNAGCYLRYSTDKFFNHDDETGDDRGSSRLGVMIAIVLSTTAFLMLSLFAAYAAYARLSK 239
+ G + ++S +++ H + V S A + SL +AA S+
Sbjct: 18 LSRGAHEKFSVEEYLVH--------------ALQGSVSSGQAHSLTSLAKTWAARGSRSR 63
Query: 240 MKEDR--NNLGLYATSMKKSCLSFKY-ETLEKATNYFNPSKKLGQGGAGSVY-MGSLPNG 295
+ +N G+ T K + ++Y E + AT+ +LG+G G V+ M G
Sbjct: 64 EPSPKTEDNEGVLLTEKLKP-VDYEYREEVHWATHQL----RLGRGSFGEVHRMEDKQTG 118
Query: 296 TTVAVKRLIFNTRQWVDEFFNEVNLIS--SIEHKNLVKLLGCSIEGPESLLVYEYVPNRS 353
AVK++ E F L++ + +V L G EGP + E + S
Sbjct: 119 FQCAVKKVRL-------EVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGS 171
Query: 354 LDQFIFDKNKTKLLNWNKRFNIILGTA-EGLAYLHGGSETRIIHRDIKTSNILLDKDFT- 411
L Q + ++ R LG A EGL YLH RI+H D+K N+LL D +
Sbjct: 172 LGQLVKEQGCLP----EDRALYYLGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSH 224
Query: 412 PKIADFGLARCFAAD 426
+ DFG A C D
Sbjct: 225 AALCDFGHAVCLQPD 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 43/204 (21%)
Query: 235 ARLSKMKEDRNNLGLYATSMKKSCLSFKYETLEKATNYFNPSKKLGQGGAGSVYMG-SLP 293
R S M ++R Y + K+ +E E+ N +P +G G GSV
Sbjct: 16 PRGSHMSQERPTF--YRQELNKTI----WEVPERYQN-LSP---VGSGAYGSVCAAFDTK 65
Query: 294 NGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN 351
G VAVK+L F + + E+ L+ ++H+N++ LL + P
Sbjct: 66 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 113
Query: 352 RSLDQF--IF--------DKNK----TKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHR 397
RSL++F ++ D N KL + + +F +I GL Y+H IIHR
Sbjct: 114 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD---IIHR 169
Query: 398 DIKTSNILLDKDFTPKIADFGLAR 421
D+K SN+ +++D KI DFGLAR
Sbjct: 170 DLKPSNLAVNEDCELKILDFGLAR 193
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 43/204 (21%)
Query: 235 ARLSKMKEDRNNLGLYATSMKKSCLSFKYETLEKATNYFNPSKKLGQGGAGSVYMG-SLP 293
R S M ++R Y + K+ +E E+ N +P +G G GSV
Sbjct: 15 PRGSHMSQERPTF--YRQELNKTI----WEVPERYQN-LSP---VGSGAYGSVCAAFDTK 64
Query: 294 NGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN 351
G VAVK+L F + + E+ L+ ++H+N++ LL + P
Sbjct: 65 TGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 112
Query: 352 RSLDQF--IF--------DKNK----TKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHR 397
RSL++F ++ D N KL + + +F +I GL Y+H IIHR
Sbjct: 113 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD---IIHR 168
Query: 398 DIKTSNILLDKDFTPKIADFGLAR 421
D+K SN+ +++D KI DFGLAR
Sbjct: 169 DLKPSNLAVNEDCELKILDFGLAR 192
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLL 333
+ LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK
Sbjct: 13 QTLGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G EG L EY L I + + F+ ++ G+ YLHG
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 125
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
I HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLL 333
+ LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK
Sbjct: 13 QTLGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G EG L EY L I + + F+ ++ G+ YLHG
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 125
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
I HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLL 333
+ LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK
Sbjct: 13 QTLGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G EG L EY L I + + F+ ++ G+ YLHG
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 125
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
I HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 43/204 (21%)
Query: 235 ARLSKMKEDRNNLGLYATSMKKSCLSFKYETLEKATNYFNPSKKLGQGGAGSVYMG-SLP 293
R S M ++R Y + K+ +E E+ N +P +G G GSV
Sbjct: 16 PRGSHMSQERPTF--YRQELNKTI----WEVPERYQN-LSP---VGSGAYGSVCAAFDTK 65
Query: 294 NGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN 351
G VAVK+L F + + E+ L+ ++H+N++ LL + P
Sbjct: 66 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 113
Query: 352 RSLDQF--IF--------DKNK----TKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHR 397
RSL++F ++ D N KL + + +F +I GL Y+H IIHR
Sbjct: 114 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD---IIHR 169
Query: 398 DIKTSNILLDKDFTPKIADFGLAR 421
D+K SN+ +++D KI DFGLAR
Sbjct: 170 DLKPSNLAVNEDCELKILDFGLAR 193
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLL 333
+ LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK
Sbjct: 13 QTLGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G EG L EY L I + + F+ ++ G+ YLHG
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 125
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
I HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 43/204 (21%)
Query: 235 ARLSKMKEDRNNLGLYATSMKKSCLSFKYETLEKATNYFNPSKKLGQGGAGSVYMG-SLP 293
R S M ++R Y + K+ +E E+ N +P +G G GSV
Sbjct: 16 PRGSHMSQERPTF--YRQELNKTI----WEVPERYQN-LSP---VGSGAYGSVCAAFDTK 65
Query: 294 NGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN 351
G VAVK+L F + + E+ L+ ++H+N++ LL + P
Sbjct: 66 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 113
Query: 352 RSLDQF--IF--------DKNK----TKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHR 397
RSL++F ++ D N KL + + +F +I GL Y+H IIHR
Sbjct: 114 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD---IIHR 169
Query: 398 DIKTSNILLDKDFTPKIADFGLAR 421
D+K SN+ +++D KI DFGLAR
Sbjct: 170 DLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 277 KKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKN 328
++LGQG G VY G+ + T VAVK + + R+ + EF NE +++ +
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHH 82
Query: 329 LVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNKRFNIILGTAE 381
+V+LLG +G +L+V E + + RSL + + + A+
Sbjct: 83 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+AYL+ + +HR++ N ++ DFT KI DFG+ R
Sbjct: 143 GMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTR 179
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 43/204 (21%)
Query: 235 ARLSKMKEDRNNLGLYATSMKKSCLSFKYETLEKATNYFNPSKKLGQGGAGSVYMG-SLP 293
R S M ++R Y + K+ +E E+ N +P +G G GSV
Sbjct: 15 PRGSHMSQERPTF--YRQELNKTI----WEVPERYQN-LSP---VGSGAYGSVCAAFDTK 64
Query: 294 NGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN 351
G VAVK+L F + + E+ L+ ++H+N++ LL + P
Sbjct: 65 TGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV------------FTPA 112
Query: 352 RSLDQF--IF--------DKNK----TKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHR 397
RSL++F ++ D N KL + + +F +I GL Y+H IIHR
Sbjct: 113 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSAD---IIHR 168
Query: 398 DIKTSNILLDKDFTPKIADFGLAR 421
D+K SN+ +++D KI DFGLAR
Sbjct: 169 DLKPSNLAVNEDCELKILDFGLAR 192
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 23 WEVPERYQN-LSP---IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 78
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 79 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 126
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 127 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 277 KKLGQGGAGSVYMGSLPN------GTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKN 328
++LGQG G VY G+ + T VAVK + + R+ + EF NE +++ +
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHH 81
Query: 329 LVKLLGCSIEGPESLLVYEYVPN-------RSLDQFIFDKNKTKLLNWNKRFNIILGTAE 381
+V+LLG +G +L+V E + + RSL + + + A+
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+AYL+ + +HR++ N ++ DFT KI DFG+ R
Sbjct: 142 GMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLL 333
+ LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK
Sbjct: 12 QTLGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G EG L EY L I + + F+ ++ G+ YLHG
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 124
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
I HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLL 333
+ LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK
Sbjct: 13 QTLGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G EG L EY L I + + F+ ++ G+ YLHG
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 125
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
I HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLL 333
+ LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK
Sbjct: 12 QTLGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G EG L EY L I + + F+ ++ G+ YLHG
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 124
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
I HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLL 333
+ LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK
Sbjct: 12 QTLGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G EG L EY L I + + F+ ++ G+ YLHG
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 124
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
I HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 279 LGQGGAGSVYMG--SLPNGTT--VAVKRLIFN-TRQWVDEFFNEVNLISSIEHKNLVKLL 333
+G G G V G LP VA+K L T + +F +E +++ +H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G + +++ E++ N SLD F+ + + ++ G A G+ YL ++
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTVIQLVGMLRGIAAGMKYL---ADMN 129
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
+HR + NIL++ + K++DFGL+R D
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDD 162
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K L G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L++ + +P L ++ + LLNW + A+G
Sbjct: 84 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 137 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L++ + +P L ++ + LLNW + A+G
Sbjct: 79 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFG A+ A+
Sbjct: 132 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 94/219 (42%), Gaps = 27/219 (12%)
Query: 216 VLSTTAFLMLSLFAAYAAYARLSKMKEDR--NNLGLYATSMKKSCLSFKY-ETLEKATNY 272
V S A + SL +AA S+ + +N G+ T K + ++Y E + AT+
Sbjct: 21 VSSGQAHSLTSLAKTWAARGSRSREPSPKTEDNEGVLLTEKLKP-VDYEYREEVHWATHQ 79
Query: 273 FNPSKKLGQGGAGSVY-MGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLIS--SIEHKNL 329
+LG+G G V+ M G AVK++ E F L++ + +
Sbjct: 80 L----RLGRGSFGEVHRMEDKQTGFQCAVKKVRL-------EVFRAEELMACAGLTSPRI 128
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTA-EGLAYLHG 388
V L G EGP + E + SL Q + ++ R LG A EGL YLH
Sbjct: 129 VPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP----EDRALYYLGQALEGLEYLH- 183
Query: 389 GSETRIIHRDIKTSNILLDKDFT-PKIADFGLARCFAAD 426
RI+H D+K N+LL D + + DFG A C D
Sbjct: 184 --SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPD 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEH----------- 326
LGQG G V + + A+K+ I +T + + +EV L++S+ H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKK-IRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 327 --KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
+N VK + + + EY NR+L I +N + ++ + + E L+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQ--QRDEYWRLFRQILEALS 130
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
Y+H IIHRD+K NI +D+ KI DFGLA+
Sbjct: 131 YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLL 333
+ LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK
Sbjct: 13 QTLGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G EG L EY L I + + F+ ++ G+ YLHG
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 125
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
I HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLL 333
+ LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK
Sbjct: 12 QTLGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G EG L EY L I + + F+ ++ G+ YLHG
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 124
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
I HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLLGC 335
LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK G
Sbjct: 14 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 336 SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
EG L EY L I + + F+ ++ G+ YLHG I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IGIT 126
Query: 396 HRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLLGC 335
LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK G
Sbjct: 13 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 336 SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
EG L EY L I + + F+ ++ G+ YLHG I
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IGIT 125
Query: 396 HRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 169
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLL 333
+ LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK
Sbjct: 12 QTLGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G EG L EY L I + + F+ ++ G+ YLHG
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 124
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
I HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L++ + +P L ++ + LLNW + A+G
Sbjct: 79 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
+ YL + R++HRD+ N+L+ KI DFG A+ A+
Sbjct: 132 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 172
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLL 333
+ LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK
Sbjct: 12 QTLGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G EG L EY L I + + F+ ++ G+ YLHG
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 124
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
I HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 23 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 78
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 79 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 126
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 127 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLL 333
+ LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK
Sbjct: 12 QTLGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G EG L EY L I + + F+ ++ G+ YLHG
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IG 124
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
I HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 18 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQK 121
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 122 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR 173
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 29 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 84
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 85 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 132
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 133 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR 184
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L++ + +P L ++ + LLNW + A+G
Sbjct: 81 PHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 133
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
+ YL + R++HRD+ N+L+ KI DFG A+ A+
Sbjct: 134 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 174
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVD---EFFNEVNLISSIEHKNLVKLLGC 335
LG+G G V + ++ T AV I + ++ VD E+ + + H+N+VK G
Sbjct: 14 LGEGAYGEVQL-AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 336 SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRII 395
EG L EY L I + + F+ ++ G+ YLHG I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLHG---IGIT 126
Query: 396 HRDIKTSNILLDKDFTPKIADFGLARCFA-ADRTHVSTAVAGTL 438
HRDIK N+LLD+ KI+DFGLA F +R + + GTL
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTL 170
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 24 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 79
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 80 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 127
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 128 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR 179
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 216 VLSTTAFLMLSLFAAYAA-YARLSKM-KEDRNNLGLYATSMKKSCLSFKYETLEKATNYF 273
V S A + SL +++ A+L ++ E +N G+ T K YE E+ ++
Sbjct: 5 VSSGQAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKP---VDYEYREE-VHWM 60
Query: 274 NPSKKLGQGGAGSVY-MGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLIS--SIEHKNLV 330
++G+G G V+ M G AVK++ E F L++ + +V
Sbjct: 61 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRL-------EVFRVEELVACAGLSSPRIV 113
Query: 331 KLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
L G EGP + E + SL Q I + L ++ + EGL YLH
Sbjct: 114 PLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLH--- 167
Query: 391 ETRIIHRDIKTSNILLDKDFT-PKIADFGLARCFAAD 426
RI+H D+K N+LL D + + DFG A C D
Sbjct: 168 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 33/160 (20%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+G G GSV G VAVK+L F + + E+ L+ ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 336 SIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKLLNWNKRFNIILGTAE 381
+ P RSL++F ++ D N KL + + +F +I
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILR 136
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 26/170 (15%)
Query: 277 KKLGQGGAGSVYMGSLPNG--TTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKL-- 332
K LG GG G V+ ++ N VA+K+++ Q V E+ +I ++H N+VK+
Sbjct: 17 KPLGCGGNGLVF-SAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFE 75
Query: 333 ------------LGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTA 380
+G E +V EY+ + + LL + R +
Sbjct: 76 ILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL----EQGPLLEEHARL-FMYQLL 130
Query: 381 EGLAYLHGGSETRIIHRDIKTSNILLD-KDFTPKIADFGLARCFAADRTH 429
GL Y+H + ++HRD+K +N+ ++ +D KI DFGLAR +H
Sbjct: 131 RGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH 177
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 20/164 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 84 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
+ YL + R++HRD+ N+L+ KI DFG A+ A+
Sbjct: 137 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 177
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K L G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 84 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 137 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 20 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 75
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 76 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 123
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 124 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR 175
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 23/217 (10%)
Query: 216 VLSTTAFLMLSLFAAYAA-YARLSKM-KEDRNNLGLYATSMKKSCLSFKYETLEKATNYF 273
V S A + SL +++ A+L ++ E +N G+ T K YE E+ ++
Sbjct: 21 VSSGQAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKP---VDYEYREE-VHWM 76
Query: 274 NPSKKLGQGGAGSVY-MGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLIS--SIEHKNLV 330
++G+G G V+ M G AVK++ E F L++ + +V
Sbjct: 77 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRL-------EVFRVEELVACAGLSSPRIV 129
Query: 331 KLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
L G EGP + E + SL Q I + L ++ + EGL YLH
Sbjct: 130 PLYGAVREGPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLH--- 183
Query: 391 ETRIIHRDIKTSNILLDKDFT-PKIADFGLARCFAAD 426
RI+H D+K N+LL D + + DFG A C D
Sbjct: 184 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 220
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 20/164 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
+ YL + R++HRD+ N+L+ KI DFG A+ A+
Sbjct: 130 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 170
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K L G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 77 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
+ YL + R++HRD+ N+L+ KI DFGLA+ A+
Sbjct: 130 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 87 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 135 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 87 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 134
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 135 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 82 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 129
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 130 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 30 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELR 85
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 86 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 133
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 134 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 77 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 125 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 20/164 (12%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEH 326
F K LG G G+VY G +P G V + I R+ E +E +++S+++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEG 382
++ +LLG + L+ + +P L ++ + LLNW + A+G
Sbjct: 79 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
+ YL + R++HRD+ N+L+ KI DFG A+ A+
Sbjct: 132 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 172
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 23 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 78
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 79 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 126
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 127 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 19/160 (11%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKN 328
+ LG G G VY G + P+ VAVK L +++ + +D F E +IS H+N
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD-FLMEALIISKFNHQN 109
Query: 329 LVKLLGCSIEGPESLLVYEYVPNRSLDQFIFD----KNKTKLLNWNKRFNIILGTAEGLA 384
+V+ +G S++ ++ E + L F+ + ++ L ++ A G
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 385 YLHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLAR 421
YL E IHRDI N LL KI DFG+AR
Sbjct: 170 YLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 17 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 72
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 73 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 120
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 121 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 172
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 98 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 145
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 146 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 81 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 128
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 129 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 71 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKL 118
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 119 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 18 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 122 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 18 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 122 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 24 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR 79
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 80 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 127
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 128 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 80 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 128 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 24 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 79
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 80 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 127
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 128 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 18 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 122 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 77 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 124
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 125 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 20 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 75
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 76 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 123
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 124 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 41 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 96
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 97 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 144
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 145 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 33/160 (20%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+G G GSV G VAVK+L F + + E+ L+ ++H+N++ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 336 SIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKLLNWNKRFNIILGTAE 381
+ P RSL++F ++ D N KL + + +F +I
Sbjct: 100 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-LIYQILR 146
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 147 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 183
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWV--DEFFNEVNLISSIEHKNLVKLLG 334
+KLG G G V++ + V + I R V ++ E+ ++ S++H N++K+
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 335 CSIEGPESLLVYEYVPN-RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
+ +V E L++ + + + K L+ ++ LAY H
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QH 144
Query: 394 IIHRDIKTSNILLDKDFTP----KIADFGLARCFAADRTHVSTAVAGT 437
++H+D+K NIL +D +P KI DFGLA F +D ST AGT
Sbjct: 145 VVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEH--STNAAGT 189
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 86 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 133
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 134 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 184
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 71 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 119 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 72
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 73 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 120
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 121 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 171
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 71 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 119 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 72 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 119
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 120 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 72 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 119
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 120 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 71 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 118
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 119 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 18 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQK 121
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 122 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 7/157 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
K+LG G G V G VA+K +I DEF E ++ ++ H+ LV+L G
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ ++ EY+ N L ++ + + + E + YL + +H
Sbjct: 80 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 134
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTA 433
RD+ N L++ K++DFGL+R + D + S+
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSV 170
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 7/157 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
K+LG G G V G VA+K +I DEF E ++ ++ H+ LV+L G
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ ++ EY+ N L ++ + + + E + YL + +H
Sbjct: 69 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 123
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTA 433
RD+ N L++ K++DFGL+R + D + S+
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSV 159
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 7/157 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
K+LG G G V G VA+K +I DEF E ++ ++ H+ LV+L G
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ ++ EY+ N L ++ + + + E + YL + +H
Sbjct: 73 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 127
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTA 433
RD+ N L++ K++DFGL+R + D + S+
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSV 163
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 267 EKATNYFNPS---KKLGQ-GGAGSVYMGSLPNGTTVAVKRLI-FNTRQWVDEFFNEVNLI 321
E T NP + +G+ G G VY + +A ++I + + ++++ E++++
Sbjct: 2 EHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 61
Query: 322 SSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAE 381
+S +H N+VKLL ++ E+ ++D + + + L ++ + T +
Sbjct: 62 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLD 119
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
L YLH + +IIHRD+K NIL D K+ADFG++
Sbjct: 120 ALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 7/157 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
K+LG G G V G VA+K +I DEF E ++ ++ H+ LV+L G
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ ++ EY+ N L ++ + + + E + YL + +H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 128
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTA 433
RD+ N L++ K++DFGL+R + D + S+
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSV 164
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 7/156 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
K+LG G G V G VA+K +I DEF E ++ ++ H+ LV+L G
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ ++ EY+ N L ++ + + + E + YL + +H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 128
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCFAADRTHVST 432
RD+ N L++ K++DFGL+R + D + S+
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSS 163
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 7/157 (4%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
K+LG G G V G VA+K +I DEF E ++ ++ H+ LV+L G
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ ++ EY+ N L ++ + + + E + YL + +H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 143
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTA 433
RD+ N L++ K++DFGL+R + D + S+
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSV 179
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 24/159 (15%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
LGQG G V + + A+K+ I +T + + +EV L++S+ H+ +V+ +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKK-IRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 338 E-----GPES--------LLVYEYVPNRSLDQFIFDKNKTKLLN--WNKRFNIILGTAEG 382
E P + + EY NR+L I +N + + W + F IL E
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW-RLFRQIL---EA 128
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L+Y+H IIHR++K NI +D+ KI DFGLA+
Sbjct: 129 LSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCS 336
K+LG G G V G VA+K +I DEF E ++ ++ H+ LV+L G
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 337 IEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIH 396
+ ++ EY+ N L ++ + + + E + YL + +H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 143
Query: 397 RDIKTSNILLDKDFTPKIADFGLARCFAADR 427
RD+ N L++ K++DFGL+R D
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 17/159 (10%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLI-FNTRQWVDEFFNEVNLISSIEHKNL 329
+ LG G G VY G + P+ VAVK L + Q +F E +IS + H+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 110
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFD----KNKTKLLNWNKRFNIILGTAEGLAY 385
V+ +G S++ ++ E + L F+ + ++ L ++ A G Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 386 LHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLAR 421
L E IHRDI N LL KI DFG+AR
Sbjct: 171 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 279 LGQGGAGSVYMGSLP-NGTTVAVK---RLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
LG G G V +G G VAVK R + V + E+ + H +++KL
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 335 CSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
+ +V EYV L +I + + + + F IL + Y H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD---YCH---RHMV 132
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLA 420
+HRD+K N+LLD KIADFGL+
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLS 158
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 277 KKLGQGGAGSVYMGS-LPNGTTVAVKRLIF-----NTRQWVDEFFNEVNLISSIEHKNLV 330
K LG G G+V+ G +P G ++ + I + RQ + + I S++H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 331 KLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEGLAYL 386
+LLG G LV +Y+P SL + LLNW + A+G+ YL
Sbjct: 79 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 131
Query: 387 HGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGT 437
E ++HR++ N+LL ++ADFG+A D + + A T
Sbjct: 132 ---EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 179
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 279 LGQGGAGSVYMGSLP-NGTTVAVK---RLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
LG G G V +G G VAVK R + V + E+ + H +++KL
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 335 CSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
+ +V EYV L +I + + + + F IL + Y H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD---YCH---RHMV 132
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLA 420
+HRD+K N+LLD KIADFGL+
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLS 158
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 276 SKKLGQGGAGSVYMGSLPN----GTTVAVKRLIFN-TRQWVDEFFNEVNLISSIEHKNLV 330
++ LG+G G VY G N VAVK + T ++F +E ++ +++H ++V
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 331 KLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAE---GLAYLH 387
KL+G E P + ++ E P L ++ ++NK L K ++L + + +AYL
Sbjct: 77 KLIGIIEEEP-TWIIMELYPYGELGHYL-ERNKNSL----KVLTLVLYSLQICKAMAYLE 130
Query: 388 GGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
+HRDI NIL+ K+ DFGL+R + D + +V
Sbjct: 131 S---INCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVT 174
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 6/143 (4%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIE 338
+G+G G V VA+K++ + + F E+ +S + H N+VKL G +
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 339 GPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRD 398
LV EY SL + + L ++G+AYLH +IHRD
Sbjct: 73 --PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 130
Query: 399 IKTSNILLDKDFTP-KIADFGLA 420
+K N+LL T KI DFG A
Sbjct: 131 LKPPNLLLVAGGTVLKICDFGTA 153
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 279 LGQGGAGSVYMGSLPN----GTTVAVKRLIFN-TRQWVDEFFNEVNLISSIEHKNLVKLL 333
LG+G G VY G N VAVK + T ++F +E ++ +++H ++VKL+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAE---GLAYLHGGS 390
G E P + ++ E P L ++ ++NK L K ++L + + +AYL
Sbjct: 92 GIIEEEP-TWIIMELYPYGELGHYL-ERNKNSL----KVLTLVLYSLQICKAMAYLES-- 143
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
+HRDI NIL+ K+ DFGL+R + D + +V
Sbjct: 144 -INCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVT 186
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI D+GLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR 173
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 6/143 (4%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIE 338
+G+G G V VA+K++ + + F E+ +S + H N+VKL G +
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLN 73
Query: 339 GPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRD 398
LV EY SL + + L ++G+AYLH +IHRD
Sbjct: 74 --PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 131
Query: 399 IKTSNILLDKDFTP-KIADFGLA 420
+K N+LL T KI DFG A
Sbjct: 132 LKPPNLLLVAGGTVLKICDFGTA 154
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 276 SKKLGQGGAGSVYMGSLPN----GTTVAVKRLIFN-TRQWVDEFFNEVNLISSIEHKNLV 330
++ LG+G G VY G N VAVK + T ++F +E ++ +++H ++V
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 331 KLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAE---GLAYLH 387
KL+G E P + ++ E P L ++ ++NK L K ++L + + +AYL
Sbjct: 73 KLIGIIEEEP-TWIIMELYPYGELGHYL-ERNKNSL----KVLTLVLYSLQICKAMAYLE 126
Query: 388 GGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
+HRDI NIL+ K+ DFGL+R + D + +V
Sbjct: 127 S---INCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVT 170
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 17/159 (10%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLI-FNTRQWVDEFFNEVNLISSIEHKNL 329
+ LG G G VY G + P+ VAVK L + Q +F E +IS + H+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 96
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFD----KNKTKLLNWNKRFNIILGTAEGLAY 385
V+ +G S++ ++ E + L F+ + ++ L ++ A G Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 386 LHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLAR 421
L E IHRDI N LL KI DFG+AR
Sbjct: 157 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 262 KYETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQW--VDEFFNEV 318
KYE LEK +G+G G+V+ + VA+KR+ + E+
Sbjct: 3 KYEKLEK----------IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREI 52
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILG 378
L+ ++HKN+V+L + LV+E+ ++ L ++ N K F +
Sbjct: 53 CLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSF--LFQ 109
Query: 379 TAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCF 423
+GL + H + ++HRD+K N+L++++ K+ADFGLAR F
Sbjct: 110 LLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLARAF 151
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 277 KKLGQGGAGSVYMGS-LPNGTTVAVKRLIF-----NTRQWVDEFFNEVNLISSIEHKNLV 330
K LG G G+V+ G +P G ++ + I + RQ + + I S++H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 331 KLLGCSIEGPESLLVYEYVPNRSLDQFIFDKN----KTKLLNWNKRFNIILGTAEGLAYL 386
+LLG G LV +Y+P SL + LLNW + A+G+ YL
Sbjct: 97 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 149
Query: 387 HGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGT 437
E ++HR++ N+LL ++ADFG+A D + + A T
Sbjct: 150 ---EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 197
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 12/174 (6%)
Query: 268 KATNYFNPSKKLGQGGAGSVYMGSL---PNGTTVAVKRLIFNTRQW-VDEFFNEVNLISS 323
K N +LG G GSV G VA+K L T + +E E ++
Sbjct: 7 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ 66
Query: 324 IEHKNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEG 382
+++ +V+L+G C E +LV E L +F+ K + + + ++ + G
Sbjct: 67 LDNPYIVRLIGVCQAEA--LMLVMEMAGGGPLHKFLVGKREE--IPVSNVAELLHQVSMG 122
Query: 383 LAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
+ YL E +HRD+ N+LL KI+DFGL++ AD ++ + AG
Sbjct: 123 MKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 173
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV + +G +AVK+L F + + E+ L
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 321 ISSIEHKNLVKLL-----GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNI 375
+ ++H+N++ LL S+E + + ++ L+ + KL + + +F +
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV---KCQKLTDDHVQF-L 159
Query: 376 ILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I GL Y+H IIHRD+K SN+ +++D KI DFGLAR
Sbjct: 160 IYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 202
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 27/164 (16%)
Query: 279 LGQGGAGSVYMGSLPNG---TTVAVKRLI-FNTRQWVDEFFNEVNLISSI-EHKNLVKLL 333
+G+G G V + A+KR+ + ++ +F E+ ++ + H N++ LL
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTA------------- 380
G L EY P+ +L F+ K+++L + F I TA
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 381 ---EGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ YL S+ + IHRD+ NIL+ +++ KIADFGL+R
Sbjct: 150 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 27/164 (16%)
Query: 279 LGQGGAGSVYMGSLPNG---TTVAVKRLI-FNTRQWVDEFFNEVNLISSI-EHKNLVKLL 333
+G+G G V + A+KR+ + ++ +F E+ ++ + H N++ LL
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTA------------- 380
G L EY P+ +L F+ K+++L + F I TA
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 381 ---EGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ YL S+ + IHRD+ NIL+ +++ KIADFGL+R
Sbjct: 140 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 305 FNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLL--VYEYVPNRSLDQFIFDKN 362
R +++ + E+ ++ ++H N+VKL+ + E L V+E V + +
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP----VMEVP 129
Query: 363 KTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARC 422
K L+ ++ +G+ YLH +IIHRDIK SN+L+ +D KIADFG++
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 423 FAADRTHVSTAVA 435
F +S V
Sbjct: 187 FKGSDALLSNTVG 199
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 23/155 (14%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDE--FFNEVNLISSI--EHKNLVKLLG 334
+G+G G V+ GS G VAVK IF++R DE +F E L +++ H+N++ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVK--IFSSR---DEKSWFRETELYNTVMLRHENILGFIA 98
Query: 335 CSIEGPES----LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG-- 388
+ S L+ Y SL +D + L+ I+L A GLA+LH
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 389 -GSETR--IIHRDIKTSNILLDKDFTPKIADFGLA 420
G++ + I HRD+K+ NIL+ K+ IAD GLA
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 189
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLI-FNTRQWVDEFFNEVNLISSIEHKNL 329
+ LG G G VY G + P+ VAVK L + Q +F E +IS H+N+
Sbjct: 28 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 87
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFD----KNKTKLLNWNKRFNIILGTAEGLAY 385
V+ +G S++ ++ E + L F+ + ++ L ++ A G Y
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 386 LHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLAR 421
L E IHRDI N LL KI DFG+AR
Sbjct: 148 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 23/155 (14%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDE--FFNEVNLISSI--EHKNLVKLLG 334
+G+G G V+ GS G VAVK IF++R DE +F E L +++ H+N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVK--IFSSR---DEKSWFRETELYNTVMLRHENILGFIA 69
Query: 335 CSIEGPES----LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG-- 388
+ S L+ Y SL +D + L+ I+L A GLA+LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 389 -GSETR--IIHRDIKTSNILLDKDFTPKIADFGLA 420
G++ + I HRD+K+ NIL+ K+ IAD GLA
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLI-FNTRQWVDEFFNEVNLISSIEHKNL 329
+ LG G G VY G + P+ VAVK L + Q +F E +IS H+N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFD----KNKTKLLNWNKRFNIILGTAEGLAY 385
V+ +G S++ ++ E + L F+ + ++ L ++ A G Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 386 LHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLAR 421
L E IHRDI N LL KI DFG+AR
Sbjct: 156 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 24/171 (14%)
Query: 277 KKLGQGGAGSVYMGSL----PNGTT--VAVKRLIFNTRQWV-DEFFNEVNLISSIEHKNL 329
++LG+ G VY G L P T VA+K L + +EF +E L + ++H N+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIF-------------DKNKTKLLNWNKRFNII 376
V LLG + +++ Y + L +F+ D+ L +++
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 377 LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR-CFAAD 426
A G+ YL S ++H+D+ T N+L+ KI+D GL R +AAD
Sbjct: 152 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAAD 199
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 23/155 (14%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDE--FFNEVNLISSI--EHKNLVKLLG 334
+G+G G V+ GS G VAVK IF++R DE +F E L +++ H+N++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVK--IFSSR---DEKSWFRETELYNTVMLRHENILGFIA 69
Query: 335 CSIEGPES----LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG-- 388
+ S L+ Y SL +D + L+ I+L A GLA+LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 389 -GSETR--IIHRDIKTSNILLDKDFTPKIADFGLA 420
G++ + I HRD+K+ NIL+ K+ IAD GLA
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 24/171 (14%)
Query: 277 KKLGQGGAGSVYMGSL----PNGTT--VAVKRLIFNTRQWV-DEFFNEVNLISSIEHKNL 329
++LG+ G VY G L P T VA+K L + +EF +E L + ++H N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIF-------------DKNKTKLLNWNKRFNII 376
V LLG + +++ Y + L +F+ D+ L +++
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 377 LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR-CFAAD 426
A G+ YL S ++H+D+ T N+L+ KI+D GL R +AAD
Sbjct: 135 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAAD 182
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLI-FNTRQWVDEFFNEVNLISSIEHKNL 329
+ LG G G VY G + P+ VAVK L + Q +F E +IS H+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 110
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFD----KNKTKLLNWNKRFNIILGTAEGLAY 385
V+ +G S++ ++ E + L F+ + ++ L ++ A G Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 386 LHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLAR 421
L E IHRDI N LL KI DFG+AR
Sbjct: 171 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLI-FNTRQWVDEFFNEVNLISSIEHKNL 329
+ LG G G VY G + P+ VAVK L + Q +F E +IS H+N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFD----KNKTKLLNWNKRFNIILGTAEGLAY 385
V+ +G S++ ++ E + L F+ + ++ L ++ A G Y
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 386 LHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLAR 421
L E IHRDI N LL KI DFG+AR
Sbjct: 156 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLI-FNTRQWVDEFFNEVNLISSIEHKNL 329
+ LG G G VY G + P+ VAVK L + Q +F E +IS H+N+
Sbjct: 54 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 113
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFD----KNKTKLLNWNKRFNIILGTAEGLAY 385
V+ +G S++ ++ E + L F+ + ++ L ++ A G Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 386 LHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLAR 421
L E IHRDI N LL KI DFG+AR
Sbjct: 174 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLI-FNTRQWVDEFFNEVNLISSIEHKNL 329
+ LG G G VY G + P+ VAVK L + Q +F E +IS H+N+
Sbjct: 53 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 112
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFD----KNKTKLLNWNKRFNIILGTAEGLAY 385
V+ +G S++ ++ E + L F+ + ++ L ++ A G Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 386 LHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLAR 421
L E IHRDI N LL KI DFG+AR
Sbjct: 173 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 77/197 (39%), Gaps = 35/197 (17%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVY------MGSLPNGTTVAVKRLIFNTRQWVDE---F 314
E E N K LG G G V +G VAVK L + DE
Sbjct: 24 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML--KSTAHADEKEAL 81
Query: 315 FNEVNLISSI-EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI--------------- 358
+E+ ++S + +H+N+V LLG G L++ EY L F+
Sbjct: 82 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPG 141
Query: 359 -----FDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPK 413
DK + L + A+G+A+L + IHRD+ N+LL K
Sbjct: 142 QDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAK 198
Query: 414 IADFGLARCFAADRTHV 430
I DFGLAR D ++
Sbjct: 199 IGDFGLARDIMNDSNYI 215
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 83/164 (50%), Gaps = 8/164 (4%)
Query: 277 KKLGQGGAG-SVYMGSLPNGTTVAVKRLIFN--TRQWVDEFFNEVNLISSIEHKNLVKLL 333
+K+G+G G ++ + S +G +K + + + + +E EV ++++++H N+V+
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
E +V +Y L + I + K L ++ + + L ++H + +
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRI-NAQKGVLFQEDQILDWFVQICLALKHVH---DRK 145
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGT 437
I+HRDIK+ NI L KD T ++ DFG+AR + ++ A GT
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-VELARACIGT 188
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKR 372
EV L+ ++H N++KL + +V E Y D+ I K K + +
Sbjct: 68 ILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDA 123
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLARCFAAD 426
II G+ Y+H + I+HRD+K NILL +KD KI DFGL+ CF +
Sbjct: 124 ARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKR 372
EV L+ ++H N++KL + +V E Y D+ I K K + +
Sbjct: 68 ILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDA 123
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLARCFAAD 426
II G+ Y+H + I+HRD+K NILL +KD KI DFGL+ CF +
Sbjct: 124 ARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLI-FNTRQWVDEFFNEVNLISSIEHKNL 329
+ LG G G VY G + P+ VAVK L + Q +F E +IS H+N+
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFD----KNKTKLLNWNKRFNIILGTAEGLAY 385
V+ +G S++ ++ E + L F+ + ++ L ++ A G Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 386 LHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLAR 421
L E IHRDI N LL KI DFG+AR
Sbjct: 197 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 312 DEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNK 371
DE E N++ +++ +V+++G E +LV E L++++ K N
Sbjct: 53 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN--- 108
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVS 431
++ + G+ YL E+ +HRD+ N+LL KI+DFGL++ AD +
Sbjct: 109 IIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 165
Query: 432 TAVAG 436
G
Sbjct: 166 AQTHG 170
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLI-FNTRQWVDEFFNEVNLISSIEHKNL 329
+ LG G G VY G + P+ VAVK L + Q +F E +IS H+N+
Sbjct: 43 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 102
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFD----KNKTKLLNWNKRFNIILGTAEGLAY 385
V+ +G S++ ++ E + L F+ + ++ L ++ A G Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 386 LHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLAR 421
L E IHRDI N LL KI DFG+AR
Sbjct: 163 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 312 DEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNK 371
DE E N++ +++ +V+++G E +LV E L++++ K N
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN--- 112
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVS 431
++ + G+ YL E+ +HRD+ N+LL KI+DFGL++ AD +
Sbjct: 113 IIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 169
Query: 432 TAVAG 436
G
Sbjct: 170 AQTHG 174
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 30/143 (20%)
Query: 294 NGTTVAVKRLI--FNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPN 351
G VA+K+L F + + + E+ L+ + H+N++ LL + P+
Sbjct: 49 TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV------------FTPD 96
Query: 352 RSLDQF--------IFDKNKTKLLNWNK----RFN-IILGTAEGLAYLHGGSETRIIHRD 398
+LD F + KL+ K R ++ +GL Y+H IIHRD
Sbjct: 97 ETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRD 153
Query: 399 IKTSNILLDKDFTPKIADFGLAR 421
+K N+ +++D KI DFGLAR
Sbjct: 154 LKPGNLAVNEDCELKILDFGLAR 176
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 312 DEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNK 371
DE E N++ +++ +V+++G E +LV E L++++ K N
Sbjct: 51 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN--- 106
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVS 431
++ + G+ YL E+ +HRD+ N+LL KI+DFGL++ AD +
Sbjct: 107 IIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 163
Query: 432 TAVAG 436
G
Sbjct: 164 AQTHG 168
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKR 372
EV L+ ++H N++KL + +V E Y D+ I K K + +
Sbjct: 68 ILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDA 123
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLARCFAAD 426
II G+ Y+H + I+HRD+K NILL +KD KI DFGL+ CF +
Sbjct: 124 ARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLI-FNTRQWVDEFFNEVNLISSIEHKNL 329
+ LG G G VY G + P+ VAVK L + Q +F E +IS H+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFD----KNKTKLLNWNKRFNIILGTAEGLAY 385
V+ +G S++ ++ E + L F+ + ++ L ++ A G Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 386 LHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLAR 421
L E IHRDI N LL KI DFG+AR
Sbjct: 157 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 18 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQK 121
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DFGL R
Sbjct: 122 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR 173
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 78/190 (41%), Gaps = 28/190 (14%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVY------MGSLPNGTTVAVKRLIFNTRQWVDE---F 314
E E N K LG G G V +G VAVK L + DE
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML--KSTAHADEKEAL 96
Query: 315 FNEVNLISSI-EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDK------------ 361
+E+ ++S + +H+N+V LLG G L++ EY L F+ K
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPS 156
Query: 362 -NKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
N + L+ + A+G+A+L + IHRD+ N+LL KI DFGLA
Sbjct: 157 HNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 213
Query: 421 RCFAADRTHV 430
R D ++
Sbjct: 214 RDIMNDSNYI 223
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 73/168 (43%), Gaps = 30/168 (17%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEH 326
F K LG+G +V + L A+K I R + E E +++S ++H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAE 381
VKL C + + Y N L ++I FD+ T+ TAE
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----------TAE 145
Query: 382 ---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 146 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 190
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 312 DEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNK 371
DE E N++ +++ +V+++G E +LV E L++++ K N
Sbjct: 63 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN--- 118
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVS 431
++ + G+ YL E+ +HRD+ N+LL KI+DFGL++ AD +
Sbjct: 119 IIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175
Query: 432 TAVAG 436
G
Sbjct: 176 AQTHG 180
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLI-FNTRQWVDEFFNEVNLISSIEHKNL 329
+ LG G G VY G + P+ VAVK L + Q +F E +IS H+N+
Sbjct: 63 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 122
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFD----KNKTKLLNWNKRFNIILGTAEGLAY 385
V+ +G S++ ++ E + L F+ + ++ L ++ A G Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 386 LHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLAR 421
L E IHRDI N LL KI DFG+AR
Sbjct: 183 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 7/165 (4%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISS 323
E Y +P+ +G G GSV +G VA+K+L F + + + E+ L+
Sbjct: 39 ELPKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH 97
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
++H+N++ LL Y++ Q K + K ++ +GL
Sbjct: 98 MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGL 157
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRT 428
Y+H ++HRD+K N+ +++D KI DFGLAR A+ T
Sbjct: 158 KYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT 199
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 312 DEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNK 371
DE E N++ +++ +V+++G E +LV E L++++ K N
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN--- 126
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVS 431
++ + G+ YL E+ +HRD+ N+LL KI+DFGL++ AD +
Sbjct: 127 IIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 183
Query: 432 TAVAG 436
G
Sbjct: 184 AQTHG 188
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 268 KATNYFNPSKKLGQGGAGSVYMG-SLPNGTT-VAVKRLIFNTRQWVDEF--FNEVNLI-- 321
+A + ++G+G G V+ L NG VA+KR+ T + EV ++
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 322 -SSIEHKNLVKLLG-CSIEGPES----LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNI 375
+ EH N+V+L C++ + LV+E+V ++ L ++ DK + ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDM 125
Query: 376 ILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAV 434
+ GL +LH R++HRD+K NIL+ K+ADFGLAR ++ S V
Sbjct: 126 MFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 181
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 268 KATNYFNPSKKLGQGGAGSVYMG-SLPNGTT-VAVKRLIFNTRQWVDEF--FNEVNLI-- 321
+A + ++G+G G V+ L NG VA+KR+ T + EV ++
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 322 -SSIEHKNLVKLLG-CSIEGPES----LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNI 375
+ EH N+V+L C++ + LV+E+V ++ L ++ DK + ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDM 125
Query: 376 ILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAV 434
+ GL +LH R++HRD+K NIL+ K+ADFGLAR ++ S V
Sbjct: 126 MFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 181
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 312 DEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNK 371
DE E N++ +++ +V+++G E +LV E L++++ K N
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN--- 128
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVS 431
++ + G+ YL E+ +HRD+ N+LL KI+DFGL++ AD +
Sbjct: 129 IIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 432 TAVAG 436
G
Sbjct: 186 AQTHG 190
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 312 DEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNK 371
DE E N++ +++ +V+++G E +LV E L++++ K N
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN--- 128
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVS 431
++ + G+ YL E+ +HRD+ N+LL KI+DFGL++ AD +
Sbjct: 129 IIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 432 TAVAG 436
G
Sbjct: 186 AQTHG 190
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 19/156 (12%)
Query: 276 SKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSI--EHKNLVKLL 333
+ +G+G G V+ G G VAVK IF++R+ +F E + ++ H+N++ +
Sbjct: 14 QESIGKGRFGEVWRGKW-RGEEVAVK--IFSSRE-ERSWFREAEIYQTVMLRHENILGFI 69
Query: 334 GCSIEG----PESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG- 388
+ + LV +Y + SL FD + + L TA GLA+LH
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHME 125
Query: 389 --GSETR--IIHRDIKTSNILLDKDFTPKIADFGLA 420
G++ + I HRD+K+ NIL+ K+ T IAD GLA
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 19/156 (12%)
Query: 276 SKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSI--EHKNLVKLL 333
+ +G+G G V+ G G VAVK IF++R+ +F E + ++ H+N++ +
Sbjct: 9 QESIGKGRFGEVWRGKW-RGEEVAVK--IFSSRE-ERSWFREAEIYQTVMLRHENILGFI 64
Query: 334 GCSIEG----PESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG- 388
+ + LV +Y + SL FD + + L TA GLA+LH
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHME 120
Query: 389 --GSETR--IIHRDIKTSNILLDKDFTPKIADFGLA 420
G++ + I HRD+K+ NIL+ K+ T IAD GLA
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 11/171 (6%)
Query: 256 KSCLSFKYETLEKATNYFNPSKKLGQGGAGSVY-MGSLPNGTTVAVKRL--IFNTRQWVD 312
K+C+S + E + P +LG+G G V M +P+G +AVKR+ N+++
Sbjct: 36 KACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKR 95
Query: 313 EFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF---IFDKNKTKLLNW 369
+ + +++ V G + + E + + SLD+F + DK +T +
Sbjct: 96 LLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQT--IPE 152
Query: 370 NKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
+ I + + L +LH S+ +IHRD+K SN+L++ K+ DFG++
Sbjct: 153 DILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 268 KATNYFNPSKKLGQGGAGSVYMG-SLPNGTT-VAVKRLIFNTRQWVDEF--FNEVNLI-- 321
+A + ++G+G G V+ L NG VA+KR+ T + EV ++
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 322 -SSIEHKNLVKLLG-CSIEGPES----LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNI 375
+ EH N+V+L C++ + LV+E+V ++ L ++ DK + ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDM 125
Query: 376 ILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAV 434
+ GL +LH R++HRD+K NIL+ K+ADFGLAR ++ S V
Sbjct: 126 MFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 181
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 19/156 (12%)
Query: 276 SKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSI--EHKNLVKLL 333
+ +G+G G V+ G G VAVK IF++R+ +F E + ++ H+N++ +
Sbjct: 11 QESIGKGRFGEVWRGKW-RGEEVAVK--IFSSRE-ERSWFREAEIYQTVMLRHENILGFI 66
Query: 334 GCSIEG----PESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG- 388
+ + LV +Y + SL FD + + L TA GLA+LH
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHME 122
Query: 389 --GSETR--IIHRDIKTSNILLDKDFTPKIADFGLA 420
G++ + I HRD+K+ NIL+ K+ T IAD GLA
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 19/156 (12%)
Query: 276 SKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSI--EHKNLVKLL 333
+ +G+G G V+ G G VAVK IF++R+ +F E + ++ H+N++ +
Sbjct: 8 QESIGKGRFGEVWRGKW-RGEEVAVK--IFSSRE-ERSWFREAEIYQTVMLRHENILGFI 63
Query: 334 GCSIEG----PESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG- 388
+ + LV +Y + SL FD + + L TA GLA+LH
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHME 119
Query: 389 --GSETR--IIHRDIKTSNILLDKDFTPKIADFGLA 420
G++ + I HRD+K+ NIL+ K+ T IAD GLA
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 312 DEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNK 371
DE E N++ +++ +V+++G E +LV E L++++ K N
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKN--- 471
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVS 431
++ + G+ YL E+ +HRD+ N+LL KI+DFGL++ AD +
Sbjct: 472 IIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 528
Query: 432 TAVAG 436
G
Sbjct: 529 AQTHG 533
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 312 DEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNK 371
DE E N++ +++ +V+++G E +LV E L++++ K N
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKN--- 470
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVS 431
++ + G+ YL E+ +HRD+ N+LL KI+DFGL++ AD +
Sbjct: 471 IIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527
Query: 432 TAVAG 436
G
Sbjct: 528 AQTHG 532
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 19/156 (12%)
Query: 276 SKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSI--EHKNLVKLL 333
+ +G+G G V+ G G VAVK IF++R+ +F E + ++ H+N++ +
Sbjct: 34 QESIGKGRFGEVWRGKW-RGEEVAVK--IFSSRE-ERSWFREAEIYQTVMLRHENILGFI 89
Query: 334 GCSIEG----PESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG- 388
+ + LV +Y + SL FD + + L TA GLA+LH
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHME 145
Query: 389 --GSETR--IIHRDIKTSNILLDKDFTPKIADFGLA 420
G++ + I HRD+K+ NIL+ K+ T IAD GLA
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 17/173 (9%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLI-SSIEHKNLVK 331
F P LG G G++ + + VAVKR++ + D EV L+ S EH N+++
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFAD---REVQLLRESDEHPNVIR 82
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSE 391
C+ + + + + +L +++ K+ L + ++ T GLA+LH
Sbjct: 83 YF-CTEKDRQFQYIAIELCAATLQEYVEQKDFAHL--GLEPITLLQQTTSGLAHLHS--- 136
Query: 392 TRIIHRDIKTSNILLDK-----DFTPKIADFGLARCFAADRTHVS--TAVAGT 437
I+HRD+K NIL+ I+DFGL + A R S + V GT
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGT 189
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 259 LSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPNG----TTVAVKRLIFN--TRQWVD 312
L K E + F + LG+G GSV L VAVK L + ++
Sbjct: 11 LKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIE 70
Query: 313 EFFNEVNLISSIEHKNLVKLLGCSIEG------PESLLVYEYVPNRSLDQFIFDKNKTKL 366
EF E + +H ++ KL+G S+ P +++ ++ + L F+ +
Sbjct: 71 EFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGE- 129
Query: 367 LNWNKRFNIILGT--------AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFG 418
FN+ L T A G+ YL S IHRD+ N +L +D T +ADFG
Sbjct: 130 ----NPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFG 182
Query: 419 LAR 421
L+R
Sbjct: 183 LSR 185
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEH----------- 326
LGQG G V + + A+K+ I +T + + +EV L++S+ H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKK-IRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 327 --KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
+N VK + + + EY N +L I +N + ++ + + E L+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQ--QRDEYWRLFRQILEALS 130
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
Y+H IIHRD+K NI +D+ KI DFGLA+
Sbjct: 131 YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 278 KLGQGGAGSVYMGSL---PNGTTVAVKRLIFNTRQW-VDEFFNEVNLISSIEHKNLVKLL 333
+LG G GSV G VA+K L T + +E E ++ +++ +V+L+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 334 G-CSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSET 392
G C E +LV E L +F+ K + + + ++ + G+ YL E
Sbjct: 403 GVCQAEA--LMLVMEMAGGGPLHKFLVGKREE--IPVSNVAELLHQVSMGMKYL---EEK 455
Query: 393 RIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAG 436
+HR++ N+LL KI+DFGL++ AD ++ + AG
Sbjct: 456 NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 7/165 (4%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISS 323
E Y +P+ +G G GSV +G VA+K+L F + + + E+ L+
Sbjct: 21 ELPKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH 79
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
++H+N++ LL Y++ Q K + K ++ +GL
Sbjct: 80 MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGL 139
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRT 428
Y+H ++HRD+K N+ +++D KI DFGLAR A+ T
Sbjct: 140 KYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT 181
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 279 LGQGGAGSVYMGSLPNGT-TVAVKRLIFNTRQWVD--EFFNEVNLISSIEHKNLVKLLGC 335
+G+G G VY+ N VA+K++ +D E+ +++ ++ +++L
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDL 95
Query: 336 SIEGPESLLVYE--YVPNRSLDQFIFDKNKTKLLNWNKRFNIIL-GTAEGLAYLHGGSET 392
I PE LL ++ Y+ D + KT + + IL G ++H E+
Sbjct: 96 II--PEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIH---ES 150
Query: 393 RIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
IIHRD+K +N LL++D + KI DFGLAR +D+
Sbjct: 151 GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDK 185
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 19/156 (12%)
Query: 276 SKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSI--EHKNLVKLL 333
+ +G+G G V+ G G VAVK IF++R+ +F E + ++ H+N++ +
Sbjct: 47 QESIGKGRFGEVWRGKW-RGEEVAVK--IFSSRE-ERSWFREAEIYQTVMLRHENILGFI 102
Query: 334 GCSIEG----PESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG- 388
+ + LV +Y + SL FD + + L TA GLA+LH
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHME 158
Query: 389 --GSETR--IIHRDIKTSNILLDKDFTPKIADFGLA 420
G++ + I HRD+K+ NIL+ K+ T IAD GLA
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Query: 312 DEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNK 371
DE E N++ +++ +V+++G E +LV E L++++ K N
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKN--- 112
Query: 372 RFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVS 431
++ + G+ YL E+ +HRD+ N+LL KI+DFGL++ AD
Sbjct: 113 IIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK 169
Query: 432 TAVAG 436
G
Sbjct: 170 AQTHG 174
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI FGLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR 173
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI D GLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR 173
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 262 KYETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQW--VDEFFNEV 318
KYE LEK +G+G G+V+ + VA+KR+ + E+
Sbjct: 3 KYEKLEK----------IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREI 52
Query: 319 NLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILG 378
L+ ++HKN+V+L + LV+E+ ++ L ++ N K F +
Sbjct: 53 CLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSF--LFQ 109
Query: 379 TAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
+GL + H + ++HRD+K N+L++++ K+A+FGLAR F
Sbjct: 110 LLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFG 152
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 37/176 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVN 319
+E E+ N +P +G G GSV G VAVK+L F + + E+
Sbjct: 18 WEVPERYQN-LSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR 73
Query: 320 LISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TK 365
L+ ++H+N++ LL + P RSL++F ++ D N K
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 366 LLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L + + +F +I GL Y+H IIHRD+K SN+ +++D KI DF LAR
Sbjct: 122 LTDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR 173
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 10/150 (6%)
Query: 279 LGQGGAGSVYMGSLP-NGTTVAVK---RLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
LG G G V +G G VAVK R + V + E+ + H +++KL
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 335 CSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
+ +V EYV L +I + + F IL G+ Y H +
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS---GVDYCH---RHMV 137
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFA 424
+HRD+K N+LLD KIADFGL+ +
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMS 167
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 27/164 (16%)
Query: 279 LGQGGAGSVYMGSLPNG---TTVAVKRLI-FNTRQWVDEFFNEVNLISSI-EHKNLVKLL 333
+G+G G V + A+KR+ + ++ +F E+ ++ + H N++ LL
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTA------------- 380
G L EY P+ +L F+ K+++L + F I TA
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 381 ---EGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
G+ YL S+ + IHR++ NIL+ +++ KIADFGL+R
Sbjct: 147 DVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI D GLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR 173
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLI-FNTRQWVDEFFNEVNLISSIEHKNL 329
+ LG G G VY G + P+ VAVK L + Q +F E +IS H+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFD----KNKTKLLNWNKRFNIILGTAEGLAY 385
V+ +G S++ ++ E + L F+ + ++ L ++ A G Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 386 LHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLAR 421
L E IHRDI N LL KI DFG+A+
Sbjct: 157 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 33/175 (18%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRL--IFNTRQWVDEFFNEVNL 320
+T+ + + +G G GSV G VAVK+L F + + E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF--IF--------DKNK----TKL 366
+ ++H+N++ LL + P RSL++F ++ D N KL
Sbjct: 75 LKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 122
Query: 367 LNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ + +F +I GL Y+H IIHRD+K SN+ +++D KI D GLAR
Sbjct: 123 TDDHVQF-LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR 173
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 278 KLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNLVKLLG 334
K+GQG G V+ G VA+K+++ + + E+ ++ ++H+N+V L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 335 -CSIEGPES-------LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYL 386
C + LV+++ L + + L+ KR +L GL Y+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRVMQML--LNGLYYI 141
Query: 387 HGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
H +I+HRD+K +N+L+ +D K+ADFGLAR F+
Sbjct: 142 H---RNKILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 278 KLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNLVKLLG 334
K+GQG G V+ G VA+K+++ + + E+ ++ ++H+N+V L+
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 335 -CSIEGPES-------LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYL 386
C + LV+++ L + + L+ KR +L GL Y+
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRVMQML--LNGLYYI 140
Query: 387 HGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
H +I+HRD+K +N+L+ +D K+ADFGLAR F+
Sbjct: 141 H---RNKILHRDMKAANVLITRDGVLKLADFGLARAFS 175
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 20/155 (12%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F + LG+G G+VY+ + +++F + ++ V+ + E+ + + + H N
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 329 LVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAEGL 383
+++L + L+ EY P L + + FD+ +T I+ A+ L
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTA--------TIMEELADAL 136
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFG 418
Y HG ++IHRDIK N+LL KIADFG
Sbjct: 137 MYCHG---KKVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 278 KLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNLVKLLG 334
K+GQG G V+ G VA+K+++ + + E+ ++ ++H+N+V L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 335 -CSIEGPES-------LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYL 386
C + LV+++ L + + L+ KR +L GL Y+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRVMQML--LNGLYYI 141
Query: 387 HGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
H +I+HRD+K +N+L+ +D K+ADFGLAR F+
Sbjct: 142 H---RNKILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 278 KLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQ--WVDEFFNEVNLISSIEHKNLVKLLG 334
K+GQG G V+ G VA+K+++ + + E+ ++ ++H+N+V L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 335 -CSIEGPES-------LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYL 386
C + LV+++ L + + L+ KR +L GL Y+
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFC-EHDLAGLLSNVLVKFTLSEIKRVMQML--LNGLYYI 141
Query: 387 HGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
H +I+HRD+K +N+L+ +D K+ADFGLAR F+
Sbjct: 142 H---RNKILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F+ + LG+G G+VY+ + +++F + ++ V+ + E+ + S + H N
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 329 LVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG 388
++++ + L+ E+ P L + + K + + + A+ L Y H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYCH- 131
Query: 389 GSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
E ++IHRDIK N+L+ KIADFG +
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F+ + LG+G G+VY+ + +++F + ++ V+ + E+ + S + H N
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 329 LVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG 388
++++ + L+ E+ P L + + K + + + A+ L Y H
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYCH- 132
Query: 389 GSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
E ++IHRDIK N+L+ KIADFG +
Sbjct: 133 --ERKVIHRDIKPENLLMGYKGELKIADFGWS 162
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 278 KLGQGGAGSVYM-GSLPNGTTVAVKRLIFNTRQWVDE--FFNEVNLISSIEHKNLVKLLG 334
K+G+G G V+ + G VA+K+ + + V + E+ ++ ++H NLV LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 335 CSIEGPESLLVYEYVPN---RSLDQFI--FDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
LV+EY + LD++ ++ K + W T + + + H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQAVNFCHKH 121
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
+ IHRD+K NIL+ K K+ DFG AR + VA
Sbjct: 122 N---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA 164
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 19/155 (12%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
+ +G G GSV Y L VAVK+L F + + E+ L+ ++H+N++
Sbjct: 34 RPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 332 LL-----GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYL 386
LL SIE + + + L+ + K++ L+ ++ GL Y+
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIV----KSQALSDEHVQFLVYQLLRGLKYI 147
Query: 387 HGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
H IIHRD+K SN+ +++D +I DFGLAR
Sbjct: 148 HSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 279 LGQGGAG---SVYMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
+G+G G S Y N VA+K++ F + + E+ ++ + H+N++ +
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 335 CSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H +
Sbjct: 91 I-IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 146
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
++HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDH 182
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT---RQWVD-EFFNEVNLISSIEHKN 328
F+ + LG+G G+VY+ + +++F + ++ V+ + E+ + S + H N
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 329 LVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG 388
++++ + L+ E+ P L + + K + + + A+ L Y H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYCH- 131
Query: 389 GSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
E ++IHRDIK N+L+ KIADFG +
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 279 LGQGGAG---SVYMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
+G+G G S Y N VA+K++ F + + E+ ++ + H+N++ +
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI-N 89
Query: 335 CSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H +
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 146
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
++HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 276 SKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQW---VDEFFNEVNLISSIEHKNLVK 331
S LGQG +V+ G G A+K +FN + VD E ++ + HKN+VK
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIK--VFNNISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 332 LLGCSIEGP--ESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
L E +L+ E+ P SL + + + L ++ ++ G+ +L
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL--- 128
Query: 390 SETRIIHRDIKTSNILL----DKDFTPKIADFGLARCFAADRTHVS 431
E I+HR+IK NI+ D K+ DFG AR D VS
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS 174
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSI-EHKN 328
K LG G G V + TVAVK L + E +E+ ++S + H N
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 329 LVKLLG-CSIEGPESLLVYEY--------VPNRSLDQFIFDKNKTKLLNWNKRF------ 373
+V LLG C+I GP +L++ EY R D FI K ++ ++
Sbjct: 89 IVNLLGACTIGGP-TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 374 -NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHV 430
+ A+G+A+L + IHRD+ NILL KI DFGLAR D +V
Sbjct: 148 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 15/151 (9%)
Query: 277 KKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEHKNLV 330
+++G+G G V+ G L + T VAVK + R+ + +F E ++ H N+V
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVK----SCRETLPPDLKAKFLQEARILKQYSHPNIV 175
Query: 331 KLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
+L+G + +V E V + D F + + L ++ A G+ YL
Sbjct: 176 RLIGVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
IHRD+ N L+ + KI+DFG++R
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 279 LGQGGAG---SVYMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
+G+G G S Y N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-N 87
Query: 335 CSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
++HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 16/169 (9%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRL---IFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
LG GG V++ L + VAVK L + + F E +++ H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 335 C----SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
+ GP +V EYV +L + + + + +I + L + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSH--- 133
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHV--STAVAGT 437
+ IIHRD+K +NIL+ K+ DFG+AR A V + AV GT
Sbjct: 134 QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGT 182
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSI-EHKN 328
K LG G G V + TVAVK L + E +E+ ++S + H N
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 329 LVKLLG-CSIEGPESLLVYEY--------VPNRSLDQFIFDKNKTKLLNWNKRF------ 373
+V LLG C+I GP +L++ EY R D FI K ++ ++
Sbjct: 112 IVNLLGACTIGGP-TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 374 -NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHV 430
+ A+G+A+L + IHRD+ NILL KI DFGLAR D +V
Sbjct: 171 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 15/151 (9%)
Query: 277 KKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVD-----EFFNEVNLISSIEHKNLV 330
+++G+G G V+ G L + T VAVK + R+ + +F E ++ H N+V
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVK----SCRETLPPDLKAKFLQEARILKQYSHPNIV 175
Query: 331 KLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
+L+G + +V E V + D F + + L ++ A G+ YL
Sbjct: 176 RLIGVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
IHRD+ N L+ + KI+DFG++R
Sbjct: 234 ---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 270 TNYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRLIFNTRQWV-----DEFFNEVNLISS 323
++ + + LG+G G V + G AVK + + RQ + EV L+
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVK--VISKRQVKQKTDKESLLREVQLLKQ 105
Query: 324 IEHKNLVKLLGCSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEG 382
++H N++KL + LV E Y D+ I K +++ II G
Sbjct: 106 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV----DAARIIRQVLSG 161
Query: 383 LAYLHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLARCFAADR 427
+ Y+H + +I+HRD+K N+LL+ KD +I DFGL+ F A +
Sbjct: 162 ITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 206
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 76/180 (42%), Gaps = 31/180 (17%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEH 326
F K LG+G +V + L A+K I R + E E +++S ++H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAE 381
VKL + + Y N L ++I FD+ T+ TAE
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----------TAE 138
Query: 382 ---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHV-STAVAGT 437
L YLHG IIHRD+K NILL++D +I DFG A+ + + + A GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 270 TNYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRLIFNTRQWV-----DEFFNEVNLISS 323
++ + + LG+G G V + G AVK + + RQ + EV L+
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVK--VISKRQVKQKTDKESLLREVQLLKQ 106
Query: 324 IEHKNLVKLLGCSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEG 382
++H N++KL + LV E Y D+ I K +++ II G
Sbjct: 107 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV----DAARIIRQVLSG 162
Query: 383 LAYLHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLARCFAADR 427
+ Y+H + +I+HRD+K N+LL+ KD +I DFGL+ F A +
Sbjct: 163 ITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 207
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 15/172 (8%)
Query: 271 NYFNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFF--NEVNLISSIEHKN 328
+Y++ ++LG G G V+ V V + I NT +D++ NE+++++ + H
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFI-NTPYPLDKYTVKNEISIMNQLHHPK 109
Query: 329 LVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTK--LLNWNKRFNIILGTAEGLAYL 386
L+ L + E +L+ E++ L FD+ + ++ + N + EGL ++
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGEL----FDRIAAEDYKMSEAEVINYMRQACEGLKHM 165
Query: 387 HGGSETRIIHRDIKTSNILLD--KDFTPKIADFGLARCFAADR-THVSTAVA 435
H E I+H DIK NI+ + K + KI DFGLA D V+TA A
Sbjct: 166 H---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATA 214
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 279 LGQGGAGSV--YMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+G+G G V +L N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGI-ND 92
Query: 336 SIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H + +
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 149
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 150 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 17/149 (11%)
Query: 279 LGQGGAGSVYMGS-LPNGTTVAVKRLIFNTRQWVDE------FFNEVNLISSIEHKNLVK 331
LG+G G V + + VA+K F +RQ + + E++ + + H +++K
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALK---FISRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 332 LLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSE 391
L + ++V EY D +I +K + + F I+ E Y H
Sbjct: 74 LYDVITTPTDIVMVIEYAGGELFD-YIVEKKRMTEDEGRRFFQQIICAIE---YCH---R 126
Query: 392 TRIIHRDIKTSNILLDKDFTPKIADFGLA 420
+I+HRD+K N+LLD + KIADFGL+
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLS 155
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 279 LGQGGAG---SVYMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
+G+G G S Y N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-N 87
Query: 335 CSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
++HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDH 180
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 279 LGQGGAG---SVYMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
+G+G G S Y N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-N 87
Query: 335 CSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
++HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 279 LGQGGAGSV--YMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+G+G G V +L N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-ND 92
Query: 336 SIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H + +
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 149
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 150 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 270 TNYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRLIFNTRQWV-----DEFFNEVNLISS 323
++ + + LG+G G V + G AVK + + RQ + EV L+
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVK--VISKRQVKQKTDKESLLREVQLLKQ 88
Query: 324 IEHKNLVKLLGCSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEG 382
++H N++KL + LV E Y D+ I K +++ II G
Sbjct: 89 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV----DAARIIRQVLSG 144
Query: 383 LAYLHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLARCFAADR 427
+ Y+H + +I+HRD+K N+LL+ KD +I DFGL+ F A +
Sbjct: 145 ITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 189
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSI-EHKN 328
K LG G G V + TVAVK L + E +E+ ++S + H N
Sbjct: 47 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 106
Query: 329 LVKLLG-CSIEGPESLLVYEY--------VPNRSLDQFIFDKNKTKLLNWNKRF------ 373
+V LLG C+I GP +L++ EY R D FI K ++ ++
Sbjct: 107 IVNLLGACTIGGP-TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 374 -NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHV 430
+ A+G+A+L + IHRD+ NILL KI DFGLAR D +V
Sbjct: 166 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSI-EHKN 328
K LG G G V + TVAVK L + E +E+ ++S + H N
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 329 LVKLLG-CSIEGPESLLVYEY--------VPNRSLDQFIFDKNKTKLLNWNKRF------ 373
+V LLG C+I GP +L++ EY R D FI K ++ ++
Sbjct: 112 IVNLLGACTIGGP-TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 374 -NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHV 430
+ A+G+A+L + IHRD+ NILL KI DFGLAR D +V
Sbjct: 171 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 270 TNYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRLIFNTRQWV-----DEFFNEVNLISS 323
++ + + LG+G G V + G AVK + + RQ + EV L+
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVK--VISKRQVKQKTDKESLLREVQLLKQ 82
Query: 324 IEHKNLVKLLGCSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEG 382
++H N++KL + LV E Y D+ I K +++ II G
Sbjct: 83 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV----DAARIIRQVLSG 138
Query: 383 LAYLHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLARCFAADR 427
+ Y+H + +I+HRD+K N+LL+ KD +I DFGL+ F A +
Sbjct: 139 ITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 277 KKLGQGGAGSVYMGSL------PNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSI-EHKN 328
K LG G G V + TVAVK L + E +E+ ++S + H N
Sbjct: 45 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 104
Query: 329 LVKLLG-CSIEGPESLLVYEY--------VPNRSLDQFIFDKNKTKLLNWNKRF------ 373
+V LLG C+I GP +L++ EY R D FI K ++ ++
Sbjct: 105 IVNLLGACTIGGP-TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 374 -NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHV 430
+ A+G+A+L + IHRD+ NILL KI DFGLAR D +V
Sbjct: 164 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEH 326
F K LG+G +V + L A+K I R + E E +++S ++H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAE 381
VKL + + Y N L ++I FD+ T+ TAE
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----------TAE 137
Query: 382 ---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 182
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 279 LGQGGAG---SVYMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
+G+G G S Y N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-N 87
Query: 335 CSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
++HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEH 326
F K LG+G +V + L A+K I R + E E +++S ++H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAE 381
VKL + + Y N L ++I FD+ T+ TAE
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----------TAE 137
Query: 382 ---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 182
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 279 LGQGGAG---SVYMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
+G+G G S Y N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-N 89
Query: 335 CSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H +
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 146
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
++HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 279 LGQGGAG---SVYMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
+G+G G S Y N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-N 107
Query: 335 CSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H +
Sbjct: 108 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 164
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
++HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 200
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 279 LGQGGAG---SVYMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
+G+G G S Y N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 39 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-N 95
Query: 335 CSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H +
Sbjct: 96 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 152
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
++HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 188
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 279 LGQGGAG---SVYMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
+G+G G S Y N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-N 87
Query: 335 CSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
++HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEH 326
F K LG+G +V + L A+K I R + E E +++S ++H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAE 381
VKL + + Y N L ++I FD+ T+ TAE
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----------TAE 122
Query: 382 ---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 123 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 167
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEH 326
F K LG+G +V + L A+K I R + E E +++S ++H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAE 381
VKL + + Y N L ++I FD+ T+ TAE
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----------TAE 138
Query: 382 ---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 279 LGQGGAGSV--YMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+G+G G V +L N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 29 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-ND 86
Query: 336 SIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H + +
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 143
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 144 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 279 LGQGGAGSV--YMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+G+G G V +L N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 36 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-ND 93
Query: 336 SIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H + +
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 150
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 151 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEH 326
F K LG+G +V + L A+K I R + E E +++S ++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAE 381
VKL + + Y N L ++I FD+ T+ TAE
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----------TAE 140
Query: 382 ---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 279 LGQGGAGSV--YMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+G+G G V +L N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 37 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-ND 94
Query: 336 SIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H + +
Sbjct: 95 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 151
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 152 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 186
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 279 LGQGGAGSV--YMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+G+G G V +L N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 28 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-ND 85
Query: 336 SIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H + +
Sbjct: 86 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 142
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 143 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 177
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 279 LGQGGAGSV--YMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+G+G G V +L N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-ND 92
Query: 336 SIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H + +
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 149
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 279 LGQGGAGSV--YMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+G+G G V +L N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 29 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-ND 86
Query: 336 SIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H + +
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 143
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 144 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEH 326
F K LG+G +V + L A+K I R + E E +++S ++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAE 381
VKL + + Y N L ++I FD+ T+ TAE
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----------TAE 140
Query: 382 ---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 279 LGQGGAGSV--YMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+G+G G V +L N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-ND 92
Query: 336 SIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H + +
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 149
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 279 LGQGGAGSV--YMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+G+G G V +L N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 36 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-ND 93
Query: 336 SIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H + +
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 150
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 151 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNL 320
+K F K LG+G +V + L A+K I R + E E ++
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDV 60
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNI 375
+S ++H VKL + + Y N L ++I FD+ T+
Sbjct: 61 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-------- 112
Query: 376 ILGTAE---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
TAE L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 113 ---TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 160
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNL 320
+K F K LG+G +V + L A+K I R + E E ++
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDV 61
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNI 375
+S ++H VKL + + Y N L ++I FD+ T+
Sbjct: 62 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-------- 113
Query: 376 ILGTAE---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
TAE L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 114 ---TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 161
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEH 326
F K LG+G +V + L A+K I R + E E +++S ++H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAE 381
VKL + + Y N L ++I FD+ T+ TAE
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----------TAE 138
Query: 382 ---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 279 LGQGGAG---SVYMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKL-- 332
+G+G G S Y N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 333 --LGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
+IE + + + ++ L + + KT+ L+ + + GL Y+H +
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMGADLYKLL----KTQHLSNDHICYFLYQILRGLKYIHSAN 164
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
++HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 165 ---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 200
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 19/177 (10%)
Query: 256 KSCLSFKYETLEK-ATNYFNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWV--D 312
+S + YE E+ + F +K Q G G Y KR + ++R+ V +
Sbjct: 21 QSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIK------KRRLXSSRRGVSRE 74
Query: 313 EFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKR 372
E EVN++ I H N++ L + +L+ E V L F+ +K L ++
Sbjct: 75 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEA 131
Query: 373 FNIILGTAEGLAYLHGGSETRIIHRDIKTSNI-LLDKDF-TPKIA--DFGLARCFAA 425
+ +G+ YLH RI H D+K NI LLDK+ P+I DFG+A A
Sbjct: 132 TQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 185
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 279 LGQGGAGSVYMGSLP-NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSI 337
+G GG G V+ +G T +KR+ +N ++ EV ++ ++H N+V GC
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGC-W 73
Query: 338 EG----PES-------------LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTA 380
+G PE+ + E+ +L+Q+I +K + + L+ +
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALELFEQIT 132
Query: 381 EGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
+G+ Y+H ++I+RD+K SNI L KI DFGL D
Sbjct: 133 KGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 175
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNL 320
+K F K LG+G +V + L A+K I R + E E ++
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDV 63
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNI 375
+S ++H VKL + + Y N L ++I FD+ T+
Sbjct: 64 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-------- 115
Query: 376 ILGTAE---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
TAE L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 116 ---TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 163
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEH 326
F K LG+G +V + L A+K I R + E E +++S ++H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAE 381
VKL + + Y N L ++I FD+ T+ TAE
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----------TAE 141
Query: 382 ---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 186
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEH 326
F K LG+G +V + L A+K I R + E E +++S ++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAE 381
VKL + + Y N L ++I FD+ T+ TAE
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----------TAE 140
Query: 382 ---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEH 326
F K LG+G +V + L A+K I R + E E +++S ++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAE 381
VKL + + Y N L ++I FD+ T+ TAE
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----------TAE 140
Query: 382 ---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 19/155 (12%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
+ +G G GSV Y L VAVK+L F + + E+ L+ ++H+N++
Sbjct: 34 RPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 332 LL-----GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYL 386
LL SIE + + + L+ + K + L+ ++ GL Y+
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIV----KCQALSDEHVQFLVYQLLRGLKYI 147
Query: 387 HGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
H IIHRD+K SN+ +++D +I DFGLAR
Sbjct: 148 HSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 15/165 (9%)
Query: 276 SKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQW---VDEFFNEVNLISSIEHKNLVK 331
S LGQG +V+ G G A+K +FN + VD E ++ + HKN+VK
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIK--VFNNISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 332 LLGCSIEGP--ESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
L E +L+ E+ P SL + + + L ++ ++ G+ +L
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR-- 129
Query: 390 SETRIIHRDIKTSNILL----DKDFTPKIADFGLARCFAADRTHV 430
E I+HR+IK NI+ D K+ DFG AR D V
Sbjct: 130 -ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 19/155 (12%)
Query: 277 KKLGQGGAGSV---YMGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLVK 331
+ +G G GSV Y L VAVK+L F + + E+ L+ ++H+N++
Sbjct: 26 RPVGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 83
Query: 332 LL-----GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYL 386
LL SIE + + + L+ + K + L+ ++ GL Y+
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIV----KCQALSDEHVQFLVYQLLRGLKYI 139
Query: 387 HGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
H IIHRD+K SN+ +++D +I DFGLAR
Sbjct: 140 HSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR 171
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 16/169 (9%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRL---IFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
LG GG V++ L + VAVK L + + F E +++ H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 335 C----SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
+ GP +V EYV +L + + + + +I + L + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSH--- 133
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHV--STAVAGT 437
+ IIHRD+K +NI++ K+ DFG+AR A V + AV GT
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 30/174 (17%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNL 320
+K F K LG+G +V + L A+K I R + E E ++
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDV 62
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNI 375
+S ++H VKL + + Y N L ++I FD+ T+
Sbjct: 63 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-------- 114
Query: 376 ILGTAE---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
TAE L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 115 ---TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 162
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 16/169 (9%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRL---IFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
LG GG V++ L + VAVK L + + F E +++ H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 335 C----SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
+ GP +V EYV +L + + + + +I + L + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSH--- 133
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHV--STAVAGT 437
+ IIHRD+K +NI++ K+ DFG+AR A V + AV GT
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEH 326
F K LG+G +V + L A+K I R + E E +++S ++H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAE 381
VKL + + Y N L ++I FD+ T+ TAE
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----------TAE 143
Query: 382 ---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 188
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEH 326
F K LG+G +V + L A+K I R + E E +++S ++H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAE 381
VKL + + Y N L ++I FD+ T+ TAE
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----------TAE 141
Query: 382 ---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 186
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEH 326
F K LG+G +V + L A+K I R + E E +++S ++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAE 381
VKL + + Y N L ++I FD+ T+ TAE
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----------TAE 140
Query: 382 ---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 77/155 (49%), Gaps = 22/155 (14%)
Query: 279 LGQGGAGSVYM-GSLPNGTTVAVKRLIFNTRQWVD--EFFNEVNLISSIEHKNLVKLLGC 335
LG G G V+ G +A K I TR D E NE+++++ ++H NL++L
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAK--IIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 336 SIEGPESLLVYEYVPNRSLDQFIFDK--NKTKLLNWNKRFNIIL---GTAEGLAYLHGGS 390
+ +LV EYV L I D+ N T+L + IL EG+ ++H
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIIDESYNLTEL-------DTILFMKQICEGIRHMH--- 204
Query: 391 ETRIIHRDIKTSNIL-LDKDFTP-KIADFGLARCF 423
+ I+H D+K NIL +++D KI DFGLAR +
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY 239
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 85/209 (40%), Gaps = 22/209 (10%)
Query: 234 YARLSKMKEDRNNLGLYATSMKKSCLSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLP 293
+ L K K N L Y +KK L+ ++ K +G+G G V +
Sbjct: 44 FPALRKNKNIDNFLNRYEKIVKK------IRGLQMKAEDYDVVKVIGRGAFGEVQLVRHK 97
Query: 294 NGTTVAVKRLI--FNTRQWVDE-FFNEVNLISSIEHKNLVKLLGCSIEGPESL-LVYEYV 349
V +L+ F + D FF E I + + V L C+ + + L +V EY+
Sbjct: 98 ASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYM 157
Query: 350 PNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKD 409
P L + N W K + TAE + L +IHRD+K N+LLDK
Sbjct: 158 PGGDLVNLM--SNYDVPEKWAKFY-----TAEVVLALDAIHSMGLIHRDVKPDNMLLDKH 210
Query: 410 FTPKIADFGLARCFAADRT---HVSTAVA 435
K+ADFG C D T H TAV
Sbjct: 211 GHLKLADFG--TCMKMDETGMVHCDTAVG 237
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 38/178 (21%)
Query: 279 LGQGGAGSVYMGSLP-NGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC-- 335
+G GG G V+ +G T ++R+ +N + EV ++ ++H N+V GC
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE----REVKALAKLDHVNIVHYNGCWD 75
Query: 336 -----------SIEG----PES------------LLVYEYVPNRSLDQFIFDKNKTKLLN 368
S+E PE+ + E+ +L+Q+I +K + + L+
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLD 134
Query: 369 WNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
+ +G+ Y+H ++IHRD+K SNI L KI DFGL D
Sbjct: 135 KVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 189
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 17/159 (10%)
Query: 279 LGQGGAGSV--YMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+G+G G V +L N VA+K++ F + + E+ ++ H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL-NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-ND 92
Query: 336 SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFN-----IILGTAEGLAYLHGGS 390
I P E + + + Q + + + KLL N + GL Y+H +
Sbjct: 93 IIRAP----TIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
++HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 149 ---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 279 LGQGGAGSV--YMGSLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+G+G G V +L N VA++++ F + + E+ ++ H+N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL-NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGI-ND 92
Query: 336 SIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRI 394
I P + + Y+ ++ ++ KT+ L+ + + GL Y+H + +
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 149
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRD+K SN+LL+ KI DFGLAR D H
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 277 KKLGQGGAGSV-YMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLG- 334
+KLG+GG V + L +G A+KR++ + +Q +E E ++ H N+++L+
Sbjct: 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 335 CSIE---GPESLLVYEYVPNRSL-DQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
C E E+ L+ + +L ++ K+K L ++ ++LG GL +H
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG 154
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFG 418
HRD+K +NILL + P + D G
Sbjct: 155 YA---HRDLKPTNILLGDEGQPVLMDLG 179
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 15/183 (8%)
Query: 259 LSFKYETLEKATNYFNPSKKLGQGGAGSVY-MGSLPNGTTVAVKRLIFNTRQWV-DEFFN 316
L+ K + E + F +LG G G V+ + P+G +A K + + + ++
Sbjct: 13 LTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR 72
Query: 317 EVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNII 376
E+ ++ +V G E + E++ SLDQ + + K +
Sbjct: 73 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VS 129
Query: 377 LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFG--------LARCFAADRT 428
+ +GL YL + +I+HRD+K SNIL++ K+ DFG +A F R+
Sbjct: 130 IAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 187
Query: 429 HVS 431
++S
Sbjct: 188 YMS 190
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEH 326
F K LG+G +V + L A+K I R + E E +++S ++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAE 381
VKL + + Y N L ++I FD+ T+ TAE
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFY-----------TAE 140
Query: 382 ---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVK----RLIFNTRQWVDEFFNEVNLISSIEHK 327
F + LG G G V++ S NG A+K ++ +Q V+ +E ++S + H
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQ-VEHTNDERLMLSIVTHP 66
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAE---GLA 384
++++ G + + ++ +Y+ L F + + N +F AE L
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFY----AAEVCLALE 120
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
YLH II+RD+K NILLDK+ KI DFG A+ + D T+
Sbjct: 121 YLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAK-YVPDVTY 161
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 19/176 (10%)
Query: 257 SCLSFKYETLEK-ATNYFNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWV--DE 313
S + YE E+ + F +K Q G G Y KR + ++R+ V +E
Sbjct: 1 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIK------KRRLSSSRRGVSREE 54
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
EVN++ I H N++ L + +L+ E V L F+ +K L ++
Sbjct: 55 IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEAT 111
Query: 374 NIILGTAEGLAYLHGGSETRIIHRDIKTSNI-LLDKDF-TPKIA--DFGLARCFAA 425
+ +G+ YLH RI H D+K NI LLDK+ P+I DFG+A A
Sbjct: 112 QFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 164
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 6/141 (4%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIE 338
+G+G G VY G + + + + + F EV H+N+V +G +
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 339 GPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRD 398
P ++ R+L + D +L+ NK I +G+ YLH I+H+D
Sbjct: 101 PPHLAIITSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKD 155
Query: 399 IKTSNILLDKDFTPKIADFGL 419
+K+ N+ D I DFGL
Sbjct: 156 LKSKNVFYDNGKV-VITDFGL 175
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Query: 252 TSMKKSCLSFKYETLEK-ATNYFNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQW 310
++ ++ + YE E+ + F +K Q G G Y KR + ++R+
Sbjct: 3 STFRQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIK------KRRLSSSRRG 56
Query: 311 V--DEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLN 368
V +E EVN++ I H N++ L + +L+ E V L F+ +K L
Sbjct: 57 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LT 113
Query: 369 WNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNI-LLDKDF-TPKIA--DFGLARCFA 424
++ + +G+ YLH RI H D+K NI LLDK+ P+I DFG+A
Sbjct: 114 EDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 170
Query: 425 A 425
A
Sbjct: 171 A 171
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 273 FNPSKKLGQGG-AGSVYMGSLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLISSIEH 326
F K LG+G + +V L A+K I R + E E +++S ++H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIK--ILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIILGTAE 381
VKL + + Y N L ++I FD+ T+ TAE
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----------TAE 138
Query: 382 ---GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
L YLHG IIHRD+K NILL++D +I DFG A+ + +
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 15/177 (8%)
Query: 266 LEKATNYFNPSKKLGQGGAGSVY-MGSLPNGTTVAVKRLIFNTRQWV-DEFFNEVNLISS 323
+E + F +LG G G V+ + P+G +A K + + + ++ E+ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
+V G E + E++ SLDQ + K + + + +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGL 117
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFG--------LARCFAADRTHVST 432
YL + +I+HRD+K SNIL++ K+ DFG +A F R+++S
Sbjct: 118 TYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 15/177 (8%)
Query: 266 LEKATNYFNPSKKLGQGGAGSVY-MGSLPNGTTVAVKRLIFNTRQWV-DEFFNEVNLISS 323
+E + F +LG G G V+ + P+G +A K + + + ++ E+ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
+V G E + E++ SLDQ + K + + + +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGL 117
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFG--------LARCFAADRTHVST 432
YL + +I+HRD+K SNIL++ K+ DFG +A F R+++S
Sbjct: 118 TYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLIS-SIEHKNLVKLLGC 335
K LG G +G+V G VAVKR++ + + D E+ L++ S +H N+++ C
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYY-C 76
Query: 336 SIEGPESLLVYEYVPNRSLDQFIFDKNKT-KLLNWNKRFN---IILGTAEGLAYLHGGSE 391
S L + + N +L + KN + + L K +N ++ A G+A+LH
Sbjct: 77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS--- 133
Query: 392 TRIIHRDIKTSNILL 406
+IIHRD+K NIL+
Sbjct: 134 LKIIHRDLKPQNILV 148
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 15/186 (8%)
Query: 256 KSCLSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPNGTTV--AVKRLIFNTRQWVDE 313
+ L F+ T Y+ +G+G G V + ++ GT + A K++ + VD
Sbjct: 11 RENLYFQGSTKGDINQYYTLENTIGRGSWGEVKI-AVQKGTRIRRAAKKIPKYFVEDVDR 69
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
F E+ ++ S++H N+++L + + LV E L + + K ++ +
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK---RVFRESDAA 126
Query: 374 NIILGTAEGLAYLHGGSETRIIHRDIKTSNILL--DKDFTP-KIADFGLARCFAAD---R 427
I+ +AY H + + HRD+K N L D +P K+ DFGLA F R
Sbjct: 127 RIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 183
Query: 428 THVSTA 433
T V T
Sbjct: 184 TKVGTP 189
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 15/177 (8%)
Query: 266 LEKATNYFNPSKKLGQGGAGSVY-MGSLPNGTTVAVKRLIFNTRQWV-DEFFNEVNLISS 323
+E + F +LG G G V+ + P+G +A K + + + ++ E+ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
+V G E + E++ SLDQ + K + + + +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGL 117
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFG--------LARCFAADRTHVST 432
YL + +I+HRD+K SNIL++ K+ DFG +A F R+++S
Sbjct: 118 TYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 23/155 (14%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDE--FFNEVNLISSI--EHKNLVKLLG 334
+G+G G V+ G L +G +VAVK IF++R DE +F E + +++ H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVK--IFSSR---DEQSWFRETEIYNTVLLRHDNILGFIA 69
Query: 335 CSIEGPES----LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG-- 388
+ S L+ Y + SL F+ + + L + + + A GLA+LH
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFL----QRQTLEPHLALRLAVSAACGLAHLHVEI 125
Query: 389 -GSETR--IIHRDIKTSNILLDKDFTPKIADFGLA 420
G++ + I HRD K+ N+L+ + IAD GLA
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA 160
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 15/177 (8%)
Query: 266 LEKATNYFNPSKKLGQGGAGSVY-MGSLPNGTTVAVKRLIFNTRQWV-DEFFNEVNLISS 323
+E + F +LG G G V+ + P+G +A K + + + ++ E+ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
+V G E + E++ SLDQ + K + + + +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGL 117
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFG--------LARCFAADRTHVST 432
YL + +I+HRD+K SNIL++ K+ DFG +A F R+++S
Sbjct: 118 TYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 12/136 (8%)
Query: 276 SKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLIS-SIEHKNLVKLLG 334
K LG G +G+V G VAVKR++ + + D E+ L++ S +H N+++
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYY- 93
Query: 335 CSIEGPESLLVYEYVPNRSLDQFIFDKNKT-KLLNWNKRFN---IILGTAEGLAYLHGGS 390
CS L + + N +L + KN + + L K +N ++ A G+A+LH
Sbjct: 94 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS-- 151
Query: 391 ETRIIHRDIKTSNILL 406
+IIHRD+K NIL+
Sbjct: 152 -LKIIHRDLKPQNILV 166
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 12/136 (8%)
Query: 276 SKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLIS-SIEHKNLVKLLG 334
K LG G +G+V G VAVKR++ + + D E+ L++ S +H N+++
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYY- 93
Query: 335 CSIEGPESLLVYEYVPNRSLDQFIFDKNKT-KLLNWNKRFN---IILGTAEGLAYLHGGS 390
CS L + + N +L + KN + + L K +N ++ A G+A+LH
Sbjct: 94 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS-- 151
Query: 391 ETRIIHRDIKTSNILL 406
+IIHRD+K NIL+
Sbjct: 152 -LKIIHRDLKPQNILV 166
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 12/136 (8%)
Query: 276 SKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLIS-SIEHKNLVKLLG 334
K LG G +G+V G VAVKR++ + + D E+ L++ S +H N+++
Sbjct: 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYY- 75
Query: 335 CSIEGPESLLVYEYVPNRSLDQFIFDKNKT-KLLNWNKRFN---IILGTAEGLAYLHGGS 390
CS L + + N +L + KN + + L K +N ++ A G+A+LH
Sbjct: 76 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS-- 133
Query: 391 ETRIIHRDIKTSNILL 406
+IIHRD+K NIL+
Sbjct: 134 -LKIIHRDLKPQNILV 148
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 15/184 (8%)
Query: 259 LSFKYETLEKATNYFNPSKKLGQGGAGSVY-MGSLPNGTTVAVKRLIFNTRQWV-DEFFN 316
L+ K + E + F +LG G G V+ + P+G +A K + + + ++
Sbjct: 21 LTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR 80
Query: 317 EVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNII 376
E+ ++ +V G E + E++ SLDQ + K + +
Sbjct: 81 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 137
Query: 377 LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFG--------LARCFAADRT 428
+ +GL YL + +I+HRD+K SNIL++ K+ DFG +A F R+
Sbjct: 138 IAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 195
Query: 429 HVST 432
++S
Sbjct: 196 YMSP 199
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 279 LGQGGAGSV----YMGSLPNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSIEHKNLVKLL 333
+G+G G V YM VA+K T V E F E + +H ++VKL+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G E P ++ E L F+ + + L + L TA LAYL R
Sbjct: 83 GVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLES---KR 136
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRDI N+L+ + K+ DFGL+R + D T+
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTY 171
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 11/168 (6%)
Query: 265 TLEKATNYFNPSKKLGQGGAGSVY-MGSLPNGTTVAVKRL--IFNTRQWVDEFFNEVNLI 321
++E + P +LG+G G V M +P+G +AVKR+ N+++ + +
Sbjct: 1 SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISM 60
Query: 322 SSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF---IFDKNKTKLLNWNKRFNIILG 378
+++ V G + + E + + SLD+F + DK +T + + I +
Sbjct: 61 RTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQT--IPEDILGKIAVS 117
Query: 379 TAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
+ L +LH S+ +IHRD+K SN+L++ K+ DFG++ D
Sbjct: 118 IVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 279 LGQGGAGSV----YMGSLPNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSIEHKNLVKLL 333
+G+G G V YM VA+K T V E F E + +H ++VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G E P ++ E L F+ + + L + L TA LAYL R
Sbjct: 78 GVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLES---KR 131
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRDI N+L+ + K+ DFGL+R + D T+
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTY 166
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 16/169 (9%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRL---IFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
LG GG V++ L VAVK L + + F E +++ H +V +
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 335 C----SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
+ GP +V EYV +L + + + + +I + L + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSH--- 133
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHV--STAVAGT 437
+ IIHRD+K +NI++ K+ DFG+AR A V + AV GT
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 279 LGQGGAGSV----YMGSLPNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSIEHKNLVKLL 333
+G+G G V YM VA+K T V E F E + +H ++VKL+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G E P ++ E L F+ + + L + L TA LAYL R
Sbjct: 106 GVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLES---KR 159
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRDI N+L+ + K+ DFGL+R + D T+
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTY 194
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 279 LGQGGAGSV----YMGSLPNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSIEHKNLVKLL 333
+G+G G V YM VA+K T V E F E + +H ++VKL+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G E P ++ E L F+ + + L + L TA LAYL R
Sbjct: 80 GVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLES---KR 133
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRDI N+L+ + K+ DFGL+R + D T+
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTY 168
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 279 LGQGGAGSVYMGSLPNGTTV-----AVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLL 333
LG+GG + S + V K L+ Q ++ E+++ S+ H+++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR-EKMSMEISIHRSLAHQHVVGFH 81
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLAYLHGGS 390
G + +V E RSL + K + L R+ I+LG YLH
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQ----YLH--- 132
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
R+IHRD+K N+ L++D KI DFGLA
Sbjct: 133 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 270 TNYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRLIFNTRQWV-----DEFFNEVNLISS 323
++ + + LG+G G V + G AVK + + RQ + EV L+
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVK--VISKRQVKQKTDKESLLREVQLLKQ 82
Query: 324 IEHKNLVKLLGCSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEG 382
++H N+ KL + LV E Y D+ I K +++ II G
Sbjct: 83 LDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV----DAARIIRQVLSG 138
Query: 383 LAYLHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLARCFAADR 427
+ Y H + +I+HRD+K N+LL+ KD +I DFGL+ F A +
Sbjct: 139 ITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 279 LGQGGAGSV----YMGSLPNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSIEHKNLVKLL 333
+G+G G V YM VA+K T V E F E + +H ++VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G E P ++ E L F+ + + L + L TA LAYL R
Sbjct: 78 GVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLES---KR 131
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRDI N+L+ + K+ DFGL+R + D T+
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTY 166
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 15/184 (8%)
Query: 259 LSFKYETLEKATNYFNPSKKLGQGGAGSVY-MGSLPNGTTVAVKRLIFNTRQWV-DEFFN 316
L+ K + E + F +LG G G V+ + P+G +A K + + + ++
Sbjct: 56 LTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR 115
Query: 317 EVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNII 376
E+ ++ +V G E + E++ SLDQ + K + +
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVS 172
Query: 377 LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFG--------LARCFAADRT 428
+ +GL YL + +I+HRD+K SNIL++ K+ DFG +A F R+
Sbjct: 173 IAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 230
Query: 429 HVST 432
++S
Sbjct: 231 YMSP 234
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 279 LGQGGAGSV----YMGSLPNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSIEHKNLVKLL 333
+G+G G V YM VA+K T V E F E + +H ++VKL+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G E P ++ E L F+ + + L + L TA LAYL R
Sbjct: 81 GVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLES---KR 134
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRDI N+L+ + K+ DFGL+R + D T+
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTY 169
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 15/177 (8%)
Query: 266 LEKATNYFNPSKKLGQGGAGSVY-MGSLPNGTTVAVKRLIFNTRQWV-DEFFNEVNLISS 323
+E + F +LG G G V+ + P+G +A K + + + ++ E+ ++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
+V G E + E++ SLDQ + K + + + +GL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIAVIKGL 117
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFG--------LARCFAADRTHVST 432
YL + +I+HRD+K SNIL++ K+ DFG +A F R+++S
Sbjct: 118 TYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 172
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 16/169 (9%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRL---IFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
LG GG V++ L VAVK L + + F E +++ H +V +
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 96
Query: 335 C----SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
+ GP +V EYV +L + + + + +I + L + H
Sbjct: 97 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSH--- 150
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHV--STAVAGT 437
+ IIHRD+K +NI++ K+ DFG+AR A V + AV GT
Sbjct: 151 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 199
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 279 LGQGGAGSV----YMGSLPNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSIEHKNLVKLL 333
+G+G G V YM VA+K T V E F E + +H ++VKL+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G E P ++ E L F+ + + L + L TA LAYL R
Sbjct: 75 GVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA--LAYLES---KR 128
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRDI N+L+ + K+ DFGL+R + D T+
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTY 163
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 113
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 170
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 171 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 215
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 30 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 84
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 141
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 142 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 186
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 53 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 107
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 164
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 165 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 209
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 80/192 (41%), Gaps = 43/192 (22%)
Query: 248 GLYATSMKKSCLSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNT 307
G++ TS KK LS Y+ + KKLG G G V L V+R I
Sbjct: 25 GMFITS-KKGHLSEMYQRV----------KKLGSGAYGEVL---LCRDKVTHVERAIKII 70
Query: 308 RQWV------DEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYE-YVPNRSLDQFIFD 360
R+ + EV ++ ++H N++KL + LV E Y D+ I
Sbjct: 71 RKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH- 129
Query: 361 KNKTKLLNWNKRFN------IILGTAEGLAYLHGGSETRIIHRDIKTSNILL---DKDFT 411
+FN II G+ YLH + I+HRD+K N+LL +KD
Sbjct: 130 ---------RMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDAL 177
Query: 412 PKIADFGLARCF 423
KI DFGL+ F
Sbjct: 178 IKIVDFGLSAVF 189
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 16/169 (9%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRL---IFNTRQWVDEFFNEVNLISSIEHKNLVKLLG 334
LG GG V++ L VAVK L + + F E +++ H +V +
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 335 C----SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
+ GP +V EYV +L + + + + +I + L + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSH--- 133
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHV--STAVAGT 437
+ IIHRD+K +NI++ K+ DFG+AR A V + AV GT
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 91
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 148
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 149 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 91
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 148
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 149 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 61 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 115
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 172
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 173 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 217
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 113
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 170
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 171 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 215
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 21/148 (14%)
Query: 273 FNPSKKLGQGGAGSVYMG--------SLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSI 324
FN S LGQG ++ G + T V +K L R + + FF +++S +
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 325 EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNII--LGTAEG 382
HK+LV G G E++LV E+V SLD ++ KNK + NI+ L A+
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYL-KKNKNCI-------NILWKLEVAKQ 121
Query: 383 LAY-LHGGSETRIIHRDIKTSNILLDKD 409
LA+ +H E +IH ++ NILL ++
Sbjct: 122 LAWAMHFLEENTLIHGNVCAKNILLIRE 149
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 15/171 (8%)
Query: 271 NYFNPSKKLGQGGAGSVYMGSLPNGTTV--AVKRLIFNTRQWVDEFFNEVNLISSIEHKN 328
Y+ +G+G G V + ++ GT + A K++ + VD F E+ ++ S++H N
Sbjct: 9 QYYTLENTIGRGSWGEVKI-AVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67
Query: 329 LVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHG 388
+++L + + LV E L + + K ++ + I+ +AY H
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCH- 123
Query: 389 GSETRIIHRDIKTSNILL--DKDFTP-KIADFGLARCFAAD---RTHVSTA 433
+ + HRD+K N L D +P K+ DFGLA F RT V T
Sbjct: 124 --KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTP 172
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 98
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 156 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 200
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 104 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 158
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 215
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 216 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 260
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 63 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 117
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 174
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 175 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 219
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 79
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 136
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 279 LGQGGAGSVYMGSLPNGTTV-----AVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLL 333
LG+GG + S + V K L+ Q ++ E+++ S+ H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR-EKMSMEISIHRSLAHQHVVGFH 83
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLAYLHGGS 390
G + +V E RSL + K + L R+ I+LG YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQ----YLH--- 134
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
R+IHRD+K N+ L++D KI DFGLA
Sbjct: 135 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 279 LGQGGAGSVYMGSLPNGTTV-----AVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLL 333
LG+GG + S + V K L+ Q ++ E+++ S+ H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR-EKMSMEISIHRSLAHQHVVGFH 83
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLAYLHGGS 390
G + +V E RSL + K + L R+ I+LG YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQ----YLH--- 134
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
R+IHRD+K N+ L++D KI DFGLA
Sbjct: 135 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 83
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 140
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 141 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 185
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 279 LGQGGAGSVYMGSLPNGTTV-----AVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLL 333
LG+GG + S + V K L+ Q ++ E+++ S+ H+++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR-EKMSMEISIHRSLAHQHVVGFH 87
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLAYLHGGS 390
G + +V E RSL + K + L R+ I+LG YLH
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQ----YLH--- 138
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
R+IHRD+K N+ L++D KI DFGLA
Sbjct: 139 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 92
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 149
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 150 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 194
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 79
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 136
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 279 LGQGGAGSVYMGSLPNGTTV-----AVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLL 333
LG+GG + S + V K L+ Q ++ E+++ S+ H+++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR-EKMSMEISIHRSLAHQHVVGFH 105
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLAYLHGGS 390
G + +V E RSL + K + L R+ I+LG YLH
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQ----YLH--- 156
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
R+IHRD+K N+ L++D KI DFGLA
Sbjct: 157 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 80
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 137
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 138 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 182
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 79
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 136
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 87
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 144
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 145 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 189
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Query: 298 VAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF 357
+ K L+ Q ++ E+++ S+ H+++V G + +V E RSL +
Sbjct: 73 IVPKSLLLKPHQR-EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL 131
Query: 358 IFDKNKTKLLNWNKRF---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKI 414
K + L R+ I+LG YLH R+IHRD+K N+ L++D KI
Sbjct: 132 --HKRRKALTEPEARYYLRQIVLGCQ----YLH---RNRVIHRDLKLGNLFLNEDLEVKI 182
Query: 415 ADFGLA 420
DFGLA
Sbjct: 183 GDFGLA 188
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 279 LGQGGAGSVYMGSLPNGT-TVAVKRLIFNTRQWVD--EFFNEVNLISSIEHKNLVKLLGC 335
+G+G G VY+ N VA+K++ +D E+ +++ ++ +++L
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 336 SIEGPESLLVYE--YVPNRSLDQFIFDKNKTKLLNWNKRFNIIL-GTAEGLAYLHGGSET 392
I P+ LL ++ Y+ D + KT + + IL G ++H E+
Sbjct: 94 II--PDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH---ES 148
Query: 393 RIIHRDIKTSNILLDKDFTPKIADFGLARCFAADR 427
IIHRD+K +N LL++D + K+ DFGLAR +++
Sbjct: 149 GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEK 183
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 23/196 (11%)
Query: 259 LSFKYETLEKATNYFNPSKKLGQGGAGSVY------MGSLPNGTTVAVKRLIFN-TRQWV 311
L + E + N K LG+G G V + TVAVK L T
Sbjct: 15 LPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH 74
Query: 312 DEFFNEVNLISSI-EHKNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNW 369
+E+ ++ I H N+V LLG C+ G +++ E+ +L ++ K + + + +
Sbjct: 75 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK-RNEFVPY 133
Query: 370 NKRFNIIL----------GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGL 419
+ L A+G+ +L + + IHRD+ NILL + KI DFGL
Sbjct: 134 KDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGL 190
Query: 420 ARCFAADRTHVSTAVA 435
AR D +V A
Sbjct: 191 ARDIYKDPDYVRKGDA 206
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 65/148 (43%), Gaps = 11/148 (7%)
Query: 279 LGQGGAGSV----YMGSLPNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSIEHKNLVKLL 333
+G+G G V YM VA+K T V E F E + +H ++VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G E P ++ E L F+ + + L + L TA LAYL R
Sbjct: 78 GVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA--LAYLES---KR 131
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLAR 421
+HRDI N+L+ + K+ DFGL+R
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 12/170 (7%)
Query: 261 FKYETLEKATNYFNPSKKLGQGGAGSVYMGS-LPNGTTVAVKRLIFNTRQWVDEFFNEVN 319
F +T+E + L +GG VY + +G A+KRL+ N + EV
Sbjct: 18 FVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVC 77
Query: 320 LISSIE-HKNLVKLLGCSIEGPES--------LLVYEYVPNRSLDQFIFDKNKTKLLNWN 370
+ + H N+V+ + G E LL+ E + L +F+ L+ +
Sbjct: 78 FMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQ-LVEFLKKMESRGPLSCD 136
Query: 371 KRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
I T + ++H + IIHRD+K N+LL T K+ DFG A
Sbjct: 137 TVLKIFYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 21/148 (14%)
Query: 273 FNPSKKLGQGGAGSVYMG--------SLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSI 324
FN S LGQG ++ G + T V +K L R + + FF +++S +
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 325 EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNII--LGTAEG 382
HK+LV G + G E++LV E+V SLD ++ KNK + NI+ L A+
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCI-------NILWKLEVAKQ 121
Query: 383 L-AYLHGGSETRIIHRDIKTSNILLDKD 409
L A +H E +IH ++ NILL ++
Sbjct: 122 LAAAMHFLEENTLIHGNVCAKNILLIRE 149
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLL--VYEYVPNRSLDQFIFDKNKTK-LLNWN 370
+EVNL+ ++H N+V+ I+ + L V EY L I K + L+
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 371 KRFNIILGTAEGLAYLHGGSE--TRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRT 428
++ L H S+ ++HRD+K +N+ LD K+ DFGLAR D T
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-T 170
Query: 429 HVSTAVAGT 437
+ A GT
Sbjct: 171 SFAKAFVGT 179
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNLVK----L 332
+G+G G V T VA+K++ F + + E+ ++ H+N++ L
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 333 LGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSET 392
++E + Y+ ++ ++ K++ L+ + + GL Y+H +
Sbjct: 111 RASTLEAMRDV----YIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN-- 164
Query: 393 RIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
++HRD+K SN+L++ KI DFGLAR + H
Sbjct: 165 -VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDH 200
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 298 VAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF 357
V K ++ Q ++ E+ + S+++ ++V G + +V E RSL +
Sbjct: 74 VVPKSMLLKPHQK-EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL 132
Query: 358 IFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADF 417
K + + R+ + T +G+ YLH R+IHRD+K N+ L+ D KI DF
Sbjct: 133 --HKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDF 186
Query: 418 GLA 420
GLA
Sbjct: 187 GLA 189
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKL- 332
+K +G G G VY L +G VA+K+++ + R F N E+ ++ ++H N+V+L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLR 79
Query: 333 --LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
S E + + LV +YVP R + K ++ + K + L LA
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FRSLA 136
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
Y+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 298 VAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF 357
V K ++ Q ++ E+ + S+++ ++V G + +V E RSL +
Sbjct: 74 VVPKSMLLKPHQK-EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL 132
Query: 358 IFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADF 417
K + + R+ + T +G+ YLH R+IHRD+K N+ L+ D KI DF
Sbjct: 133 --HKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDF 186
Query: 418 GLA 420
GLA
Sbjct: 187 GLA 189
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 298 VAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF 357
V K ++ Q ++ E+ + S+++ ++V G + +V E RSL +
Sbjct: 74 VVPKSMLLKPHQK-EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL 132
Query: 358 IFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADF 417
K + + R+ + T +G+ YLH R+IHRD+K N+ L+ D KI DF
Sbjct: 133 --HKRRKAVTEPEARY-FMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDF 186
Query: 418 GLA 420
GLA
Sbjct: 187 GLA 189
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 22/166 (13%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFN-EVNLISSIEHKNLVKLLGC 335
K +G G G V+ L VA+K+++ + R F N E+ ++ ++H N+V L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAF 100
Query: 336 SIEGPESL------LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYL 386
+ LV EYVP R+ + K +L +L LAY+
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLL---RSLAYI 157
Query: 387 HGGSETRIIHRDIKTSNILLDKDF-TPKIADFGLARCFAADRTHVS 431
H I HRDIK N+LLD K+ DFG A+ A +VS
Sbjct: 158 HS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS 200
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 279 LGQGGAGSV----YMGSLPNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSIEHKNLVKLL 333
+G+G G V YM VA+K T V E F E + +H ++VKL+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G E P ++ E L F+ + + L + L TA LAYL R
Sbjct: 458 GVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA--LAYLES---KR 511
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRDI N+L+ + K+ DFGL+R + D T+
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTY 546
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGT--TVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNL 329
F ++G+G G VY G + N T VA+K + + +++ E+ ++S + +
Sbjct: 21 FTKLDRIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
+ G ++ + ++ EY+ S D K L I+ +GL YLH
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGS----ALDLLKPGPLEETYIATILREILKGLDYLHS- 134
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
R IHRDIK +N+LL + K+ADFG+A
Sbjct: 135 --ERKIHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 279 LGQGGAGSV----YMGSLPNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSIEHKNLVKLL 333
+G+G G V YM VA+K T V E F E + +H ++VKL+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G E P ++ E L F+ + + L + L TA LAYL R
Sbjct: 78 GVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA--LAYLES---KR 131
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRDI N+L+ K+ DFGL+R + D T+
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTY 166
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 298 VAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQF 357
V K ++ Q ++ E+ + S+++ ++V G + +V E RSL +
Sbjct: 58 VVPKSMLLKPHQK-EKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL 116
Query: 358 IFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADF 417
K + + R+ + T +G+ YLH R+IHRD+K N+ L+ D KI DF
Sbjct: 117 --HKRRKAVTEPEARY-FMRQTIQGVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDF 170
Query: 418 GLA 420
GLA
Sbjct: 171 GLA 173
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLL--VYEYVPNRSLDQFIFDKNKTK-LLNWN 370
+EVNL+ ++H N+V+ I+ + L V EY L I K + L+
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 371 KRFNIILGTAEGLAYLHGGSE--TRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRT 428
++ L H S+ ++HRD+K +N+ LD K+ DFGLAR D +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 429 HVSTAVA 435
T V
Sbjct: 172 FAKTFVG 178
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 80/203 (39%), Gaps = 23/203 (11%)
Query: 253 SMKKSCLSFKYET--LEKATNYFNPSKKLGQGGAGSVY------MGSLPNGTTVAVKRLI 304
+ + C Y+ E + N K LG+G G V + TVAVK L
Sbjct: 7 PLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLK 66
Query: 305 FN-TRQWVDEFFNEVNLISSI-EHKNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDK 361
T +E+ ++ I H N+V LLG C+ G +++ E+ +L ++ K
Sbjct: 67 EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
Query: 362 NKT---------KLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP 412
L A+G+ +L + + IHRD+ NILL +
Sbjct: 127 RNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVV 183
Query: 413 KIADFGLARCFAADRTHVSTAVA 435
KI DFGLAR D +V A
Sbjct: 184 KIXDFGLARDIYKDPDYVRKGDA 206
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 15/170 (8%)
Query: 273 FNPSKKLGQGGAGSVY-MGSLPNGTTVAVKRLIFNTRQWV-DEFFNEVNLISSIEHKNLV 330
F +LG G G V+ + P+G +A K + + + ++ E+ ++ +V
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 331 KLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
G E + E++ SLDQ + + K + + +GL YL
Sbjct: 71 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK---VSIAVIKGLTYLR--E 125
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFG--------LARCFAADRTHVST 432
+ +I+HRD+K SNIL++ K+ DFG +A F R+++S
Sbjct: 126 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSP 175
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 26/157 (16%)
Query: 278 KLGQGGAGSV-YMGSLPNGTTVAVKRLIFNTRQWVDE-----FFNEVNLI-SSIEHKNLV 330
++G+G GSV M P+G +AVKR+ R VDE +++++ S + +V
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRI----RSTVDEKEQKQLLMDLDVVMRSSDCPYIV 84
Query: 331 KLLGCSIEGPESLLVYEYVPNRSLDQF-------IFDKNKTKLLNWNKRFNIILGTAEGL 383
+ G + + E + + S D+F + D ++L I L T + L
Sbjct: 85 QFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILG-----KITLATVKAL 138
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
+L +IIHRDIK SNILLD+ K+ DFG++
Sbjct: 139 NHLK--ENLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 8/155 (5%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTR-QWVDEFFNEVNLISSI 324
++ Y+ + +G GG V + + G VA+K + NT + E+ + ++
Sbjct: 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL 65
Query: 325 EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H+++ +L + +V EY P L +I +++ L+ + + +A
Sbjct: 66 RHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR---LSEEETRVVFRQIVSAVA 122
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGL 419
Y+H HRD+K N+L D+ K+ DFGL
Sbjct: 123 YVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGL 154
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSI-EHKNLVKLLGCSI 337
+G G G VY G +A +++ T +E E+N++ H+N+ G I
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 338 E-GPESL-----LVYEYVPNRSLDQFIFD-KNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
+ P + LV E+ S+ I + K T W I GL++LH
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLH--- 146
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRT 428
+ ++IHRDIK N+LL ++ K+ DFG++ DRT
Sbjct: 147 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRT 182
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 270 TNYFNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFF--NEVNLISSIEHK 327
+++F +LG+G VY +++ T VD+ E+ ++ + H
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT---VDKKIVRTEIGVLLRLSHP 108
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLH 387
N++KL E LV E V L I +K + IL E +AYLH
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQIL---EAVAYLH 165
Query: 388 GGSETRIIHRDIKTSNILL---DKDFTPKIADFGLAR 421
E I+HRD+K N+L D KIADFGL++
Sbjct: 166 ---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 29/175 (16%)
Query: 278 KLGQGGAGSVYMGSLPNGTTVAV-------KRLIFNTRQWVDEFFNEVNLISSIEHKNLV 330
++G+G +VY G L TTV V ++L + RQ F E + ++H N+V
Sbjct: 33 EIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQ---RFKEEAEXLKGLQHPNIV 88
Query: 331 KLLGC---SIEGPESL-LVYEYVPNRSLDQFI--FDKNKTKLL-NWNKRFNIILGTAEGL 383
+ +++G + + LV E + +L ++ F K K+L +W ++ +GL
Sbjct: 89 RFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGL 142
Query: 384 AYLHGGSETRIIHRDIKTSNILLDKDF-TPKIADFGLARCFAADRTHVSTAVAGT 437
+LH + IIHRD+K NI + + KI D GLA R + AV GT
Sbjct: 143 QFLHTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLA---TLKRASFAKAVIGT 193
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 35/184 (19%)
Query: 277 KKLGQGGAGSVYMGSLPNG---TTVAVKRLIFNTRQWVDE-----FFNEVNLISSI-EHK 327
K LG G G V M + G T V+++ + ++ D +E+ +++ + H+
Sbjct: 51 KVLGSGAFGKV-MNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHE 109
Query: 328 NLVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDKNK-----------TKLLNWNKRFNI 375
N+V LLG C++ GP L++EY L ++ K + K L + N+
Sbjct: 110 NIVNLLGACTLSGP-IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 376 I---------LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
+ A+G+ +L S +HRD+ N+L+ KI DFGLAR +D
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 225
Query: 427 RTHV 430
+V
Sbjct: 226 SNYV 229
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGT--TVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNL 329
F +K+G+G G V+ G + N T VA+K + + +++ E+ ++S + +
Sbjct: 29 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
K G ++ + ++ EY+ S D + L+ + I+ +GL YLH
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLH-- 141
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
SE +I HRDIK +N+LL + K+ADFG+A
Sbjct: 142 SEKKI-HRDIKAANVLLSEHGEVKLADFGVA 171
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 279 LGQGGAGSV----YMGSLPNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSIEHKNLVKLL 333
+G+G G V YM VA+K T V E F E + +H ++VKL+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 334 GCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
G E P ++ E L F+ + + L + L TA LAYL R
Sbjct: 458 GVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA--LAYLES---KR 511
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTH 429
+HRDI N+L+ K+ DFGL+R + D T+
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTY 546
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 27/115 (23%)
Query: 317 EVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKL-----LNWNK 371
E+ ++S +EH N++K+L ++E N+ Q + +K+ + L ++ +
Sbjct: 79 EIAILSRVEHANIIKVLD----------IFE---NQGFFQLVMEKHGSGLDLFAFIDRHP 125
Query: 372 RFNIILGT------AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
R + L + + YL IIHRDIK NI++ +DFT K+ DFG A
Sbjct: 126 RLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSA 177
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGT--TVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNL 329
F +K+G+G G V+ G + N T VA+K + + +++ E+ ++S + +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
K G ++ + ++ EY+ S D + L+ + I+ +GL YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLH-- 121
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
SE +I HRDIK +N+LL + K+ADFG+A
Sbjct: 122 SEKKI-HRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 7/164 (4%)
Query: 259 LSFKYETLEKATNYFNPSKKLGQGGAGSVY-MGSLPNGTTVAVKRLIFNTRQWV-DEFFN 316
L+ K + E + F +LG G G V + P+G +A K + + + ++
Sbjct: 4 LTQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIR 63
Query: 317 EVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNII 376
E+ ++ +V G E + E++ SLDQ + + + K +
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGK---VS 120
Query: 377 LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
+ GLAYL + +I+HRD+K SNIL++ K+ DFG++
Sbjct: 121 IAVLRGLAYLR--EKHQIMHRDVKPSNILVNSRGEIKLCDFGVS 162
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGT--TVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNL 329
F +K+G+G G V+ G + N T VA+K + + +++ E+ ++S + +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
K G ++ + ++ EY+ S D + L+ + I+ +GL YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLH-- 121
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
SE +I HRDIK +N+LL + K+ADFG+A
Sbjct: 122 SEKKI-HRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGT--TVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNL 329
F +K+G+G G V+ G + N T VA+K + + +++ E+ ++S + +
Sbjct: 24 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
K G ++ + ++ EY+ S D + L+ + I+ +GL YLH
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGS----ALDLLEPGPLDETQIATILREILKGLDYLH-- 136
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
SE +I HRDIK +N+LL + K+ADFG+A
Sbjct: 137 SEKKI-HRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 28/174 (16%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQ-------WVDEFF-----NEVNLISSIEH 326
+ G G+V G G VA+KR +FNT D F E+ L++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKR-VFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNR----SLDQFIFDKNKTKLLNWNKRF--NIILGTA 380
N++ L + E + Y+ L Q I D+ + F +I+LG
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLG-- 146
Query: 381 EGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD--RTHVST 432
LH E ++HRD+ NILL + I DF LAR AD +TH T
Sbjct: 147 -----LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT 195
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 28/174 (16%)
Query: 279 LGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQ-------WVDEFF-----NEVNLISSIEH 326
+ G G+V G G VA+KR +FNT D F E+ L++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKR-VFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNR----SLDQFIFDKNKTKLLNWNKRF--NIILGTA 380
N++ L + E + Y+ L Q I D+ + F +I+LG
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLG-- 146
Query: 381 EGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD--RTHVST 432
LH E ++HRD+ NILL + I DF LAR AD +TH T
Sbjct: 147 -----LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT 195
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 29/171 (16%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLI----FNTRQWVDEFFNEVNLISSIEHKNLV 330
+K +G G G VY L +G VA+K+++ F R E+ ++ ++H N+V
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIV 76
Query: 331 KL---LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAE 381
+L S E + + LV +YVP R + K ++ + K + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FR 133
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
LAY+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 29/171 (16%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLI----FNTRQWVDEFFNEVNLISSIEHKNLV 330
+K +G G G VY L +G VA+K+++ F R E+ ++ ++H N+V
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIV 76
Query: 331 KL---LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAE 381
+L S E + + LV +YVP R + K ++ + K + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMYQL--FR 133
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
LAY+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLL--VYEYVPNRSLDQFIFDKNKTK-LLNWN 370
+EVNL+ ++H N+V+ I+ + L V EY L I K + L+
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 371 KRFNIILGTAEGLAYLHGGSE--TRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
++ L H S+ ++HRD+K +N+ LD K+ DFGLAR D
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 74/214 (34%), Gaps = 64/214 (29%)
Query: 273 FNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDE-FFNEVNLISSIEHKNLV 330
F P + +G+GG G V+ + + A+KR+ R+ E EV ++ +EH +V
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 331 KLLGCSIEGPESLLVYEY------------------------VPNRSLDQFIFDKN---- 362
+ +E P E V R +D F KN
Sbjct: 68 RYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFS-TKNTVGQ 126
Query: 363 ------------------KTKLLNWNKR------------FNIILGTAEGLAYLHGGSET 392
K L +W R +I + AE + +LH
Sbjct: 127 LQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG-- 184
Query: 393 RIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
++HRD+K SNI D K+ DFGL D
Sbjct: 185 -LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD 217
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 76/198 (38%), Gaps = 24/198 (12%)
Query: 259 LSFKYETLEKATNYFNPSKKLGQGGAGSVY------MGSLPNGTTVAVKRLIFN-TRQWV 311
L + E + N K LG+G G V + TVAVK L T
Sbjct: 16 LPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH 75
Query: 312 DEFFNEVNLISSI-EHKNLVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDKNKT----- 364
+E+ ++ I H N+V LLG C+ G +++ E+ +L ++ K
Sbjct: 76 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 135
Query: 365 -------KLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADF 417
L A+G+ +L + + IHRD+ NILL + KI DF
Sbjct: 136 TPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDF 192
Query: 418 GLARCFAADRTHVSTAVA 435
GLAR D V A
Sbjct: 193 GLARDIXKDPDXVRKGDA 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGT--TVAVKRL-IFNTRQWVDEFFNEVNLISSIEHKNL 329
F +++G+G G V+ G + N T VA+K + + +++ E+ ++S + +
Sbjct: 25 FTKLERIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
K G ++G + ++ EY+ S D + + + ++ +GL YLH
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGS----ALDLLRAGPFDEFQIATMLKEILKGLDYLH-- 137
Query: 390 SETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
SE +I HRDIK +N+LL + K+ADFG+A
Sbjct: 138 SEKKI-HRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 13/135 (9%)
Query: 294 NGTTVAVKRL--IFNTRQWVDEFFNEVNLISSIEHKNLV---KLLGCSIEGPE--SLLVY 346
G VA+K++ F+ E+ ++ +H N++ +L ++ E S+ V
Sbjct: 79 TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 138
Query: 347 EYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILL 406
+ L Q I L + +L GL Y+H ++IHRD+K SN+L+
Sbjct: 139 LDLMESDLHQIIHSSQPLTLEHVRYFLYQLL---RGLKYMHSA---QVIHRDLKPSNLLV 192
Query: 407 DKDFTPKIADFGLAR 421
+++ KI DFG+AR
Sbjct: 193 NENCELKIGDFGMAR 207
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 15/162 (9%)
Query: 270 TNYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVK---RLIFNTRQWVDEFFNEVNLISSIE 325
++ + KKLG G G V + G A+K + T +EV ++ ++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 326 HKNLVKLLGCSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++KL + LV E Y D+ I + +++ I+ G
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV----DAAVIMKQVLSGTT 118
Query: 385 YLHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLARCF 423
YLH + I+HRD+K N+LL+ +D KI DFGL+ F
Sbjct: 119 YLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF 157
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 15/162 (9%)
Query: 270 TNYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVK---RLIFNTRQWVDEFFNEVNLISSIE 325
++ + KKLG G G V + G A+K + T +EV ++ ++
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 326 HKNLVKLLGCSIEGPESLLVYE-YVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
H N++KL + LV E Y D+ I + +++ I+ G
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV----DAAVIMKQVLSGTT 135
Query: 385 YLHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLARCF 423
YLH + I+HRD+K N+LL+ +D KI DFGL+ F
Sbjct: 136 YLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF 174
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 29/171 (16%)
Query: 276 SKKLGQGGAGSVYMGSL-PNGTTVAVKRLI----FNTRQWVDEFFNEVNLISSIEHKNLV 330
+K +G G G VY L +G VA+K+++ F R E+ ++ ++H N+V
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIV 76
Query: 331 KL---LGCSIEGPESL---LVYEYVPN---RSLDQFIFDKNKTKLLNWNKRFNIILGTAE 381
+L S E + + LV +YVP R + K ++ + K + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVI-YVKLYMYQL--FR 133
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCFAADRTHVS 431
LAY+H I HRDIK N+LLD D K+ DFG A+ +VS
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
GL Y+H ++IHRD+K SN+L++++ KI DFG+AR
Sbjct: 170 GLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 316 NEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNI 375
NE+ ++ I+H N+V L G L+ + V L I +K +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG---FYTERDASRL 121
Query: 376 ILGTAEGLAYLHGGSETRIIHRDIKTSNIL---LDKDFTPKIADFGLAR 421
I + + YLH + I+HRD+K N+L LD+D I+DFGL++
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 316 NEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNI 375
NE+ ++ I+H N+V L G L+ + V L I +K +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG---FYTERDASRL 121
Query: 376 ILGTAEGLAYLHGGSETRIIHRDIKTSNIL---LDKDFTPKIADFGLAR 421
I + + YLH + I+HRD+K N+L LD+D I+DFGL++
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 316 NEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNI 375
NE+ ++ I+H N+V L G L+ + V L I +K +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG---FYTERDASRL 121
Query: 376 ILGTAEGLAYLHGGSETRIIHRDIKTSNIL---LDKDFTPKIADFGLAR 421
I + + YLH + I+HRD+K N+L LD+D I+DFGL++
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 71/179 (39%), Gaps = 23/179 (12%)
Query: 277 KKLGQGGAGSVY------MGSLPNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EHKN 328
K LG+G G V + TVAVK L T +E+ ++ I H N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 329 LVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDKNKT-----------KLLNWNKRFNII 376
+V LLG C+ G +++ E+ +L ++ K L
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 377 LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
A+G+ +L + + IHRD+ NILL + KI DFGLAR D V A
Sbjct: 155 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 316 NEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNI 375
NE+ ++ I+H N+V L G L+ + V L I +K +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG---FYTERDASRL 121
Query: 376 ILGTAEGLAYLHGGSETRIIHRDIKTSNIL---LDKDFTPKIADFGLAR 421
I + + YLH + I+HRD+K N+L LD+D I+DFGL++
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 37/182 (20%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFNEVNLIS 322
E E + P +LG+G G V +P+G AVKR+ ++
Sbjct: 27 ENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRAT--------------VN 72
Query: 323 SIEHKNLVKLLGCS---IEGPESLLVY------------EYVPNRSLDQF---IFDKNKT 364
S E K L+ L S ++ P ++ Y + + SLD+F + DK +T
Sbjct: 73 SQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQT 132
Query: 365 KLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFA 424
+ + I + + L +LH S+ +IHRD+K SN+L++ K DFG++
Sbjct: 133 --IPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLV 188
Query: 425 AD 426
D
Sbjct: 189 DD 190
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 25/181 (13%)
Query: 277 KKLGQGGAGSVY------MGSLPNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EHKN 328
K LG+G G V + TVAVK L T +E+ ++ I H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 329 LVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDKN------KTKLLNWNKRFNII----- 376
+V LLG C+ G +++ E+ +L ++ K K + K F +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 377 --LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAV 434
A+G+ +L + + IHRD+ NILL + KI DFGLAR D +V
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 435 A 435
A
Sbjct: 201 A 201
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 25/181 (13%)
Query: 277 KKLGQGGAGSVY------MGSLPNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EHKN 328
K LG+G G V + TVAVK L T +E+ ++ I H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 329 LVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDKN------KTKLLNWNKRFNII----- 376
+V LLG C+ G +++ E+ +L ++ K K + K F +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 377 --LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAV 434
A+G+ +L + + IHRD+ NILL + KI DFGLAR D +V
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 435 A 435
A
Sbjct: 210 A 210
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 316 NEVNLISSIEHKNLVKLLGC--SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
E+ L+ + HKN+++L+ + E + +V EY Q + D K +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYC--VCGMQEMLDSVPEKRFPVCQAH 112
Query: 374 NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARC---FAADRT 428
+GL YLH I+H+DIK N+LL T KI+ G+A FAAD T
Sbjct: 113 GYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDT 167
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 25/181 (13%)
Query: 277 KKLGQGGAGSVY------MGSLPNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EHKN 328
K LG+G G V + TVAVK L T +E+ ++ I H N
Sbjct: 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 129
Query: 329 LVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDKN------KTKLLNWNKRFNII----- 376
+V LLG C+ G +++ E+ +L ++ K K + K F +
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 377 --LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAV 434
A+G+ +L + + IHRD+ NILL + KI DFGLAR D +V
Sbjct: 190 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 435 A 435
A
Sbjct: 247 A 247
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 16/167 (9%)
Query: 259 LSFKYETLEKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFNE 317
L K+E + K T S+ LG+G V SL NG AVK + F E
Sbjct: 6 LPGKFEDMYKLT-----SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFRE 60
Query: 318 VNLISSIE-HKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNII 376
V + + +KN+++L+ + LV+E + S+ I K K N + ++
Sbjct: 61 VETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHI---QKQKHFNEREASRVV 117
Query: 377 LGTAEGLAYLHGGSETRIIHRDIKTSNILLD--KDFTP-KIADFGLA 420
A L +LH I HRD+K NIL + + +P KI DF L
Sbjct: 118 RDVAAALDFLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLG 161
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKN-------- 328
+KLG G +V++ G +++ + + + +E+ L+ S+ + +
Sbjct: 27 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREM 86
Query: 329 LVKLLG----CSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
+V+LL + G +V+E + + L I + L K+ II +GL
Sbjct: 87 VVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKK--IIQQVLQGLD 144
Query: 385 YLHGGSETRIIHRDIKTSNILL 406
YLH ++ RIIH DIK NILL
Sbjct: 145 YLH--TKCRIIHTDIKPENILL 164
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
GL +LH I++RD+K NILLDKD KIADFG+ +
Sbjct: 131 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK 167
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 25/181 (13%)
Query: 277 KKLGQGGAGSVY------MGSLPNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EHKN 328
K LG+G G V + TVAVK L T +E+ ++ I H N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 329 LVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDKN------KTKLLNWNKRFNII----- 376
+V LLG C+ G +++ E+ +L ++ K K + K F +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 377 --LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAV 434
A+G+ +L + + IHRD+ NILL + KI DFGLAR D +V
Sbjct: 155 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 435 A 435
A
Sbjct: 212 A 212
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 25/181 (13%)
Query: 277 KKLGQGGAGSVY------MGSLPNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EHKN 328
K LG+G G V + TVAVK L T +E+ ++ I H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 329 LVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDKN------KTKLLNWNKRFNII----- 376
+V LLG C+ G +++ E+ +L ++ K K + K F +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 377 --LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAV 434
A+G+ +L + + IHRD+ NILL + KI DFGLAR D +V
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 435 A 435
A
Sbjct: 201 A 201
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L YLH SE +++RD+K N++LDKD KI DFGL +
Sbjct: 260 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 297
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L YLH SE +++RD+K N++LDKD KI DFGL +
Sbjct: 263 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
GL +LH I++RD+K NILLDKD KIADFG+ +
Sbjct: 130 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK 166
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 268 KATNYFNPSKKLGQGGAGSVYMGS-LPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEH 326
+ N + +K+G G G +Y+G+ + G VA+K T+ + E + ++
Sbjct: 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQG 63
Query: 327 K-NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAY 385
+ + C EG +++V E + D F F K L ++L + ++
Sbjct: 64 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLK------TVLLLADQMISR 117
Query: 386 LHGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLARCFAADRTH 429
+ IHRD+K N L+ K I DFGLA+ + RTH
Sbjct: 118 IEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 268 KATNYFNPSKKLGQGGAGSVYMGS-LPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEH 326
+ N + +K+G G G +Y+G+ + G VA+K T+ + E + ++
Sbjct: 4 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQG 61
Query: 327 K-NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAY 385
+ + C EG +++V E + D F F K L ++L + ++
Sbjct: 62 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLK------TVLLLADQMISR 115
Query: 386 LHGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLARCFAADRTH 429
+ IHRD+K N L+ K I DFGLA+ + RTH
Sbjct: 116 IEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 162
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 268 KATNYFNPSKKLGQGGAGSVYMGS-LPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEH 326
+ N + +K+G G G +Y+G+ + +G VA+K T+ + E ++
Sbjct: 6 RVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKH--PQLHIESKFYKMMQG 63
Query: 327 K-NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAY 385
+ + C EG +++V E + D F F K L ++L + ++
Sbjct: 64 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLK------TVLLLADQMISR 117
Query: 386 LHGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLARCFAADRTH 429
+ IHRD+K N L+ K I DFGLA+ + RTH
Sbjct: 118 IEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L YLH SE +++RD+K N++LDKD KI DFGL +
Sbjct: 120 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 25/181 (13%)
Query: 277 KKLGQGGAGSVY------MGSLPNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EHKN 328
K LG+G G V + TVAVK L T +E+ ++ I H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 329 LVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDKN------KTKLLNWNKRFNII----- 376
+V LLG C+ G +++ E+ +L ++ K K + K F +
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 377 --LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAV 434
A+G+ +L + + IHRD+ NILL + KI DFGLAR D V
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 435 A 435
A
Sbjct: 201 A 201
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L YLH SE +++RD+K N++LDKD KI DFGL +
Sbjct: 121 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 25/181 (13%)
Query: 277 KKLGQGGAGSVY------MGSLPNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EHKN 328
K LG+G G V + TVAVK L T +E+ ++ I H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 329 LVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDKN------KTKLLNWNKRFNII----- 376
+V LLG C+ G +++ E+ +L ++ K K + K F +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 377 --LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAV 434
A+G+ +L + + IHRD+ NILL + KI DFGLAR D V
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 435 A 435
A
Sbjct: 210 A 210
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L YLH SE +++RD+K N++LDKD KI DFGL +
Sbjct: 122 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKN-------- 328
+KLG G +V++ G +++ + + + +E+ L+ S+ + +
Sbjct: 43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREM 102
Query: 329 LVKLLG----CSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
+V+LL + G +V+E + + L I + L K+ II +GL
Sbjct: 103 VVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKK--IIQQVLQGLD 160
Query: 385 YLHGGSETRIIHRDIKTSNILL 406
YLH ++ RIIH DIK NILL
Sbjct: 161 YLH--TKCRIIHTDIKPENILL 180
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
L +LH + II+RDIK NILLD + + DFGL++ F AD T + GT+
Sbjct: 171 ALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTI 224
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEFFNEVNLIS 322
E K + F + GQG G+V +G + G +VA+K++I + R + + + ++
Sbjct: 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLA 74
Query: 323 SIEHKNLVKL------LGCSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNI 375
+ H N+V+L LG L +V EYVP+ +L + + + ++ +
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKV 133
Query: 376 IL-GTAEGLAYLHGGSETRIIHRDIKTSNILLDK-DFTPKIADFGLARCFAADRTHVS 431
L + LH S + HRDIK N+L+++ D T K+ DFG A+ + +V+
Sbjct: 134 FLFQLIRSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 25/181 (13%)
Query: 277 KKLGQGGAGSVY------MGSLPNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EHKN 328
K LG+G G V + TVAVK L T +E+ ++ I H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 329 LVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDKN------KTKLLNWNKRFNII----- 376
+V LLG C+ G +++ E+ +L ++ K K + K F +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 377 --LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAV 434
A+G+ +L + + IHRD+ NILL + KI DFGLAR D V
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 435 A 435
A
Sbjct: 201 A 201
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 14/132 (10%)
Query: 297 TVAVKRLIFNTRQWVD--EFFNEVNLISSIEHKNLVKLLGCSIEGP-----ESLLVYEYV 349
VA+K+++ +D E+ +++ + H ++VK+L I E +V E
Sbjct: 80 VVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA 139
Query: 350 PNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKD 409
+ F T+L +N+++G + Y+H I+HRD+K +N L+++D
Sbjct: 140 DSDFKKLFRTPVYLTELHIKTLLYNLLVG----VKYVHSAG---ILHRDLKPANCLVNQD 192
Query: 410 FTPKIADFGLAR 421
+ K+ DFGLAR
Sbjct: 193 CSVKVCDFGLAR 204
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 25/181 (13%)
Query: 277 KKLGQGGAGSVY------MGSLPNGTTVAVKRLIFN-TRQWVDEFFNEVNLISSI-EHKN 328
K LG+G G V + TVAVK L T +E+ ++ I H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 329 LVKLLG-CSIEGPESLLVYEYVPNRSLDQFIFDKN------KTKLLNWNKRFNII----- 376
+V LLG C+ G +++ E+ +L ++ K K + K F +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 377 --LGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAV 434
A+G+ +L + + IHRD+ NILL + KI DFGLAR D V
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 435 A 435
A
Sbjct: 210 A 210
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 16/180 (8%)
Query: 267 EKA-TNYFNPSKKLGQGGAGSVYMG---SLPN-GTTVAVKRLIFNTRQWVDEFFN--EVN 319
EKA ++F K LGQG G V++ + P+ G A+K L T + D E +
Sbjct: 23 EKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERD 82
Query: 320 LISSIEHKNLVKL-LGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILG 378
+++ + H +VKL EG + L+ +++ R D F + + +F +
Sbjct: 83 ILADVNHPFVVKLHYAFQTEG-KLYLILDFL--RGGDLFTRLSKEVMFTEEDVKF-YLAE 138
Query: 379 TAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
A GL +LH II+RD+K NILLD++ K+ DFGL++ A D + + GT+
Sbjct: 139 LALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKE-AIDHEKKAYSFCGTV 194
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K +G G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 101
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EYVP + F + + + RF I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+L+D+ K+ADFG A+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
GL ++H +++RD+K +NILLD+ +I+D GLA F+ + H S G +
Sbjct: 304 GLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM 357
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
GL ++H +++RD+K +NILLD+ +I+D GLA F+ + H S G +
Sbjct: 303 GLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM 356
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K +G G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 101
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EY+P D F + + + RF I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+L+D+ K+ADFG A+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K +G G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 101
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EY+P D F + + + RF I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+L+D+ K+ADFG A+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGT 437
GL +LH + II+RD+K N+LLD D +I+D GLA A +T + AGT
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGT 352
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGT 437
GL +LH + II+RD+K N+LLD D +I+D GLA A +T + AGT
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGT 352
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGT 437
GL +LH + II+RD+K N+LLD D +I+D GLA A +T + AGT
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGT 352
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
GL ++H +++RD+K +NILLD+ +I+D GLA F+ + H S G +
Sbjct: 304 GLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM 357
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
GL ++H +++RD+K +NILLD+ +I+D GLA F+ + H S G +
Sbjct: 304 GLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM 357
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGT 437
GL +LH + II+RD+K N+LLD D +I+D GLA A +T + AGT
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGT 352
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 71/177 (40%), Gaps = 24/177 (13%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRL-----IFNTRQWVDEFFNEVNLISSIEHKNLV 330
++LG GG G V G VA+K+ N +W E+ ++ + H N+V
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC----LEIQIMKKLNHPNVV 75
Query: 331 KLL----GCSIEGPE--SLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
G P LL EY L +++ L ++ + L
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 385 YLHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
YLH E RIIHRD+K NI+L + KI D G A+ D+ + T GTL
Sbjct: 136 YLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTL 187
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 374 NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
+I+ E +++LH + I+HRD+K NILLD + +++DFG +
Sbjct: 204 SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFS 247
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 71/177 (40%), Gaps = 24/177 (13%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRL-----IFNTRQWVDEFFNEVNLISSIEHKNLV 330
++LG GG G V G VA+K+ N +W E+ ++ + H N+V
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC----LEIQIMKKLNHPNVV 76
Query: 331 KLL----GCSIEGPE--SLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
G P LL EY L +++ L ++ + L
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 385 YLHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
YLH E RIIHRD+K NI+L + KI D G A+ D+ + T GTL
Sbjct: 137 YLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTL 188
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 315 FNEVNLISSIE-HKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
EV+++ + H N+++L LV++ + L ++ +K L+ +
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETR 114
Query: 374 NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
I+ E + LH + I+HRD+K NILLD D K+ DFG +
Sbjct: 115 KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 158
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 16/134 (11%)
Query: 308 RQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVP----NRSLDQFIFDKNK 363
R V F E+ ++ +EH LV L + + +V + + L Q + K +
Sbjct: 56 RNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE 115
Query: 364 TKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCF 423
T L I L YL RIIHRD+K NILLD+ I DF +A
Sbjct: 116 TVKL-------FICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAML 165
Query: 424 AADRTHVSTAVAGT 437
+ T ++T +AGT
Sbjct: 166 PRE-TQITT-MAGT 177
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 315 FNEVNLISSIE-HKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
EV+++ + H N+++L LV++ + L ++ +K L+ +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETR 127
Query: 374 NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
I+ E + LH + I+HRD+K NILLD D K+ DFG +
Sbjct: 128 KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 101
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EYVP + F + + + RF I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFXEPHARFYAAQIVLT----FE 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 102
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EYVP + F + + + RF I+L
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFXEPHARFYAAQIVLT----FE 156
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 315 FNEVNLISSIE-HKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
EV+++ + H N+++L LV++ + L ++ +K L+ +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETR 127
Query: 374 NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
I+ E + LH + I+HRD+K NILLD D K+ DFG +
Sbjct: 128 KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 101
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EYVP + F + + + RF I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFXEPHARFYAAQIVLT----FE 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 14/160 (8%)
Query: 268 KATNYFNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFN----EVNLISS 323
K ++ ++ ++LG+G A SV + T + I NT++ F E +
Sbjct: 2 KFSDNYDVKEELGKG-AFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 60
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
++H N+V+L E LV++ V L + I + + + IL E +
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ESI 117
Query: 384 AYLHGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLA 420
AY H I+HR++K N+LL K K+ADFGLA
Sbjct: 118 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 154
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 14/160 (8%)
Query: 268 KATNYFNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFN----EVNLISS 323
K ++ ++ ++LG+G A SV + T + I NT++ F E +
Sbjct: 3 KFSDNYDVKEELGKG-AFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
++H N+V+L E LV++ V L + I + + + IL E +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ESI 118
Query: 384 AYLHGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLA 420
AY H I+HR++K N+LL K K+ADFGLA
Sbjct: 119 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 102
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EYVP + F + + + RF I+L
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLT----FE 156
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 102
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EYVP + F + + + RF I+L
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLT----FE 156
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 101
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EYVP + F + + + RF I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 101
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EYVP + F + + + RF I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 101
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EYVP + F + + + RF I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 87
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EYVP + F + + + RF I+L
Sbjct: 88 FLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLT----FE 141
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 142 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 175
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L YLH +++RDIK N++LDKD KI DFGL +
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVST 432
L YLH +++RDIK N++LDKD KI DFGL + +D + T
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 164
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L YLH +++RDIK N++LDKD KI DFGL +
Sbjct: 120 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVST 432
L YLH +++RDIK N++LDKD KI DFGL + +D + T
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 164
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L YLH +++RDIK N++LDKD KI DFGL +
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 279 LGQGGAGSVYMGSLPN-GTTVAVKRLIFNTRQWVDEF---FNEVNLISSIEHKNLVKLLG 334
LG+G G V + + G AVK L + D+ E ++S + + L
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLF 90
Query: 335 CSIEGPESLL-VYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETR 393
C + P+ L V E+V L +F K++ + + L +LH +
Sbjct: 91 CCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARFYAAEIISALMFLH---DKG 144
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLAR 421
II+RD+K N+LLD + K+ADFG+ +
Sbjct: 145 IIYRDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 14/160 (8%)
Query: 268 KATNYFNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFN----EVNLISS 323
K ++ ++ ++LG+G A SV + T + I NT++ F E +
Sbjct: 3 KFSDNYDVKEELGKG-AFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
++H N+V+L E LV++ V L + I + + + IL E +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ESI 118
Query: 384 AYLHGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLA 420
AY H I+HR++K N+LL K K+ADFGLA
Sbjct: 119 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L YLH +++RDIK N++LDKD KI DFGL +
Sbjct: 117 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
L YLH +++RDIK N++LDKD KI DFGL +
Sbjct: 122 ALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 14/160 (8%)
Query: 268 KATNYFNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFN----EVNLISS 323
K ++ ++ ++LG+G A SV + T + I NT++ F E +
Sbjct: 26 KFSDNYDVKEELGKG-AFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 84
Query: 324 IEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGL 383
++H N+V+L E LV++ V L + I + + + IL E +
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ESI 141
Query: 384 AYLHGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLA 420
AY H I+HR++K N+LL K K+ADFGLA
Sbjct: 142 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 178
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 22/164 (13%)
Query: 264 ETLEKATNYFNPSKKLGQGGAGSVY--MGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLI 321
E + T F+ +K+G G GSV+ + L +G A+KR +++ + +E N +
Sbjct: 2 EMKSRYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKR----SKKPLAGSVDEQNAL 56
Query: 322 SSI-------EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF- 373
+ +H ++V+ E L+ EY SL I + +++++ K
Sbjct: 57 REVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN--YRIMSYFKEAE 114
Query: 374 --NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIA 415
+++L GL Y+H S ++H DIK SNI + + P A
Sbjct: 115 LKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAA 155
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 101
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EY P + F + + + RF I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFXEPHARFYAAQIVLT----FE 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+++D+ K+ DFG A+
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 234 YARLSKMKEDRNNLGLYATSMKK-SCLSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSL 292
+ L K K N L Y ++ K L K E E K +G+G G V +
Sbjct: 43 FPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVV-------KVIGRGAFGEVQLVRH 95
Query: 293 PNGTTVAVKRLI--FNTRQWVDE--FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEY 348
+ V +L+ F + D F+ E ++++ +V+L + +V EY
Sbjct: 96 KSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEY 155
Query: 349 VPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDK 408
+P L + N W + + TAE + L IHRD+K N+LLDK
Sbjct: 156 MPGGDLVNLM--SNYDVPEKWARFY-----TAEVVLALDAIHSMGFIHRDVKPDNMLLDK 208
Query: 409 DFTPKIADFG 418
K+ADFG
Sbjct: 209 SGHLKLADFG 218
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 25/117 (21%)
Query: 316 NEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVP-----NRSLDQFIFDKNKTKLLNWN 370
NE+ ++ I+H+N+V L LV + V +R L++ ++ + L
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---- 110
Query: 371 KRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPK------IADFGLAR 421
+I + YLH E I+HRD+K N+L TP+ I DFGL++
Sbjct: 111 ----VIQQVLSAVKYLH---ENGIVHRDLKPENLLY---LTPEENSKIMITDFGLSK 157
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 15/168 (8%)
Query: 279 LGQGGAGSVYMGSLPNGTT--------VAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLV 330
LG+GG G V+ G V K +I + E N++ ++H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 331 KLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
L+ G + L+ EY+ S + + + + + + L +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYL---SGGELFMQLEREGIFMEDTACFYLAEISMALGHLH--- 138
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+ II+RD+K NI+L+ K+ DFGL + D T V+ GT+
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTI 185
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 234 YARLSKMKEDRNNLGLYATSMKK-SCLSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSL 292
+ L K K N L Y ++ K L K E E K +G+G G V +
Sbjct: 43 FPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVV-------KVIGRGAFGEVQLVRH 95
Query: 293 PNGTTVAVKRLI--FNTRQWVDE--FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEY 348
+ V +L+ F + D F+ E ++++ +V+L + +V EY
Sbjct: 96 KSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEY 155
Query: 349 VPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDK 408
+P L + N W + + TAE + L IHRD+K N+LLDK
Sbjct: 156 MPGGDLVNLM--SNYDVPEKWARFY-----TAEVVLALDAIHSMGFIHRDVKPDNMLLDK 208
Query: 409 DFTPKIADFG 418
K+ADFG
Sbjct: 209 SGHLKLADFG 218
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 15/168 (8%)
Query: 279 LGQGGAGSVYMGSLPNGTT--------VAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLV 330
LG+GG G V+ G V K +I + E N++ ++H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 331 KLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGS 390
L+ G + L+ EY+ S + + + + + + L +LH
Sbjct: 85 DLIYAFQTGGKLYLILEYL---SGGELFMQLEREGIFMEDTACFYLAEISMALGHLH--- 138
Query: 391 ETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGTL 438
+ II+RD+K NI+L+ K+ DFGL + D T V+ GT+
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTI 185
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+E+ + T + F K LG G G V + G A+K L + +Q ++
Sbjct: 22 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ-IEH 80
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYVP + F + + + RF
Sbjct: 81 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFXEPHARF 138
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 139 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 270 TNYFNPSKKLGQGGAGSVY--MGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSI--- 324
T F+ +K+G G GSV+ + L +G A+KR +++ + +E N + +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKR----SKKPLAGSVDEQNALREVYAH 62
Query: 325 ----EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIIL 377
+H ++V+ E L+ EY SL I + +++++ K +++L
Sbjct: 63 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN--YRIMSYFKEAELKDLLL 120
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIA 415
GL Y+H S ++H DIK SNI + + P A
Sbjct: 121 QVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAA 155
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 270 TNYFNPSKKLGQGGAGSVY--MGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSI--- 324
T F+ +K+G G GSV+ + L +G A+KR +++ + +E N + +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKR----SKKPLAGSVDEQNALREVYAH 64
Query: 325 ----EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIIL 377
+H ++V+ E L+ EY SL I + +++++ K +++L
Sbjct: 65 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN--YRIMSYFKEAELKDLLL 122
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIA 415
GL Y+H S ++H DIK SNI + + P A
Sbjct: 123 QVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAA 157
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 234 YARLSKMKEDRNNLGLYATSMKK-SCLSFKYETLEKATNYFNPSKKLGQGGAGSVYMGSL 292
+ L K K N L Y ++ K L K E E K +G+G G V +
Sbjct: 38 FPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVV-------KVIGRGAFGEVQLVRH 90
Query: 293 PNGTTVAVKRLI--FNTRQWVDE--FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEY 348
+ V +L+ F + D F+ E ++++ +V+L + +V EY
Sbjct: 91 KSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEY 150
Query: 349 VPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDK 408
+P L + N W + + TAE + L IHRD+K N+LLDK
Sbjct: 151 MPGGDLVNLM--SNYDVPEKWARFY-----TAEVVLALDAIHSMGFIHRDVKPDNMLLDK 203
Query: 409 DFTPKIADFG 418
K+ADFG
Sbjct: 204 SGHLKLADFG 213
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + ++ ++ NE ++ ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKE-IEHTLNEKRILQAVNFP 101
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EY P + F + + + RF I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+++D+ K+ DFGLA+
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK 189
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 270 TNYFNPSKKLGQGGAGSVY--MGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSI--- 324
T F+ +K+G G GSV+ + L +G A+KR +++ + +E N + +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKR----SKKPLAGSVDEQNALREVYAH 60
Query: 325 ----EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIIL 377
+H ++V+ E L+ EY SL I + +++++ K +++L
Sbjct: 61 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN--YRIMSYFKEAELKDLLL 118
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIA 415
GL Y+H S ++H DIK SNI + + P A
Sbjct: 119 QVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAA 153
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 101
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EY P + F + + + RF I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+++D+ K+ DFG A+
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 22/180 (12%)
Query: 277 KKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKN-------- 328
+KLG G +V++ G +++ + + + + +E+ L+ + +
Sbjct: 37 RKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDPNKDM 96
Query: 329 LVKLLG----CSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
+V+L+ + G +V+E + + L I K+ + L +II +GL
Sbjct: 97 VVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWII--KSNYQGLPVRCVKSIIRQVLQGLD 154
Query: 385 YLHGGSETRIIHRDIKTSNILL--DKDFTPKIA----DFGLARCFAADRTHVSTAVAGTL 438
YLH S+ +IIH DIK NIL+ D + ++A ++ A + VSTA A L
Sbjct: 155 YLH--SKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPAADL 212
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 262 KYETLEKATNY---FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+E+ + T + F K LG G G V + G A+K L + +Q ++
Sbjct: 50 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ-IEH 108
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYVP + F + + + RF
Sbjct: 109 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARF 166
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 167 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+E+ + T + F K LG G G V + G A+K L + +Q ++
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ-IEH 88
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYVP + F + + + RF
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARF 146
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 147 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 17/157 (10%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTV----AVKRLIFNTRQWVDEFFNEVNLISSI-EHK 327
F+ + +G+G V + L + VK+ + N + +D E ++ H
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAE---GLA 384
LV L C V EYV L + + KL + RF +AE L
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFY----SAEISLALN 135
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH E II+RD+K N+LLD + K+ D+G+ +
Sbjct: 136 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 169
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+E+ + T + F K LG G G V + G A+K L + +Q ++
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ-IEH 88
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYVP + F + + + RF
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARF 146
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 147 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 316 NEVNLISSIEHKNLVKLLGCSIEGPESL-LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFN 374
NE+ ++ I+H+N+V L E P L LV + V L I +K
Sbjct: 69 NEIAVLRKIKHENIVALEDI-YESPNHLYLVMQLVSGGELFDRIVEKG---FYTEKDAST 124
Query: 375 IILGTAEGLAYLHGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLAR 421
+I + + YLH I+HRD+K N+L D++ I+DFGL++
Sbjct: 125 LIRQVLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 171
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+E+ + T + F K LG G G V + G A+K L + +Q ++
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ-IEH 88
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYVP + F + + + RF
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARF 146
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 147 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 379 TAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
A+G+ +L + + IHRD+ NILL + KI DFGLAR D +V A
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 379 TAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
A G+ +L S + IHRD+ NILL ++ KI DFGLAR
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLAR 247
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + G A+K L + +Q ++ NE ++ ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 101
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EYVP + F + + + RF I+L
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 379 TAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
A+G+ +L + + IHRD+ NILL + KI DFGLAR D +V A
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 379 TAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
A+G+ +L + + IHRD+ NILL + KI DFGLAR D +V A
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
Query: 317 EVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKR--FN 374
E+++++ H+N++ L E ++++E++ LD IF++ T N+R +
Sbjct: 51 EISILNIARHRNILHLHESFESMEELVMIFEFIS--GLD--IFERINTSAFELNEREIVS 106
Query: 375 IILGTAEGLAYLHGGSETRIIHRDIKTSNILLD--KDFTPKIADFGLAR 421
+ E L +LH + I H DI+ NI+ + T KI +FG AR
Sbjct: 107 YVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+E+ + T + F K LG G G V + G A+K L + +Q ++
Sbjct: 22 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ-IEH 80
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYVP + F + + + RF
Sbjct: 81 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARF 138
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 139 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 379 TAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVA 435
A+G+ +L + + IHRD+ NILL + KI DFGLAR D +V A
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTA 433
+IHRD+K SNILLD+ K+ DFG++ D+ +A
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + G A+K L + +Q ++ NE ++ ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 101
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EYVP + F + + + RF I+L
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 17/157 (10%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTV----AVKRLIFNTRQWVDEFFNEVNLISSI-EHK 327
F+ + +G+G V + L + VK+ + N + +D E ++ H
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAE---GLA 384
LV L C V EYV D + + KL + RF +AE L
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYV--NGGDLMFHMQRQRKLPEEHARFY----SAEISLALN 167
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH E II+RD+K N+LLD + K+ D+G+ +
Sbjct: 168 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 201
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + G A+K L + +Q ++ NE ++ ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 101
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EYVP + F + + + RF I+L
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEM--FSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 87
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFXEPHARF 145
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 146 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 264 ETLEKA-TNYFNPSKKLGQGGAGSVYMGSLPNGTTV-------AVKRLIFNTRQWVDEFF 315
E EKA + F K LGQG G V++ +G+ +K+ R V
Sbjct: 16 EGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM 75
Query: 316 NEVNLISSIEHKNLVKL-LGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFN 374
E +++ + H +VKL EG + L+ +++ R D F + + +F
Sbjct: 76 -ERDILVEVNHPFIVKLHYAFQTEG-KLYLILDFL--RGGDLFTRLSKEVMFTEEDVKF- 130
Query: 375 IILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A L +LH II+RD+K NILLD++ K+ DFGL++
Sbjct: 131 YLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 365 KLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFT---PKIADFGLAR 421
++++ N +I EG+ YLH + I+H D+K NILL + KI DFG++R
Sbjct: 126 EMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR 182
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 264 ETLEKA-TNYFNPSKKLGQGGAGSVYMGSLPNGTTV-------AVKRLIFNTRQWVDEFF 315
E EKA + F K LGQG G V++ +G+ +K+ R V
Sbjct: 17 EGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM 76
Query: 316 NEVNLISSIEHKNLVKL-LGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFN 374
E +++ + H +VKL EG + L+ +++ R D F + + +F
Sbjct: 77 -ERDILVEVNHPFIVKLHYAFQTEG-KLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFY 132
Query: 375 IILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A L +LH II+RD+K NILLD++ K+ DFGL++
Sbjct: 133 LA-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK 175
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 50 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 108
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 109 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFXEPHARF 166
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 167 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 17/157 (10%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTV----AVKRLIFNTRQWVDEFFNEVNLISSI-EHK 327
F+ + +G+G V + L + VK+ + N + +D E ++ H
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAE---GLA 384
LV L C V EYV D + + KL + RF +AE L
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYV--NGGDLMFHMQRQRKLPEEHARFY----SAEISLALN 120
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH E II+RD+K N+LLD + K+ D+G+ +
Sbjct: 121 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 154
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 264 ETLEKA-TNYFNPSKKLGQGGAGSVYMGSLPNGTTV-------AVKRLIFNTRQWVDEFF 315
E EKA + F K LGQG G V++ +G+ +K+ R V
Sbjct: 16 EGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM 75
Query: 316 NEVNLISSIEHKNLVKL-LGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFN 374
E +++ + H +VKL EG + L+ +++ R D F + + +F
Sbjct: 76 -ERDILVEVNHPFIVKLHYAFQTEG-KLYLILDFL--RGGDLFTRLSKEVMFTEEDVKFY 131
Query: 375 IILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
+ A L +LH II+RD+K NILLD++ K+ DFGL++
Sbjct: 132 LA-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 87
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFXEPHARF 145
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 146 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 17/157 (10%)
Query: 273 FNPSKKLGQGGAGSVYMGSLPNGTTV----AVKRLIFNTRQWVDEFFNEVNLISSI-EHK 327
F+ + +G+G V + L + VK+ + N + +D E ++ H
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAE---GLA 384
LV L C V EYV D + + KL + RF +AE L
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYV--NGGDLMFHMQRQRKLPEEHARFY----SAEISLALN 124
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH E II+RD+K N+LLD + K+ D+G+ +
Sbjct: 125 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 158
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 102
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
L KL + +V EY P + F + + + RF I+L
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFXEPHARFYAAQIVLT----FE 156
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+++D+ K+ DFG A+
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 87
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFXEPHARF 145
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 146 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 24 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 82
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 83 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFXEPHARF 140
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 141 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 184
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 87
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFAEPHARF 145
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 146 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 380 AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGT 437
AE + + + +HRDIK NIL+D + ++ADFG D T S+ GT
Sbjct: 182 AEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGT 239
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + ++ ++ NE ++ ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKE-IEHTLNEKRILQAVNFP 101
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EY P + F + + + RF I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+++D+ ++ DFGLA+
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK 189
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 50 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 108
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 109 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF 166
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 167 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 101
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EY P + F + + + RF I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+++D+ ++ DFG A+
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAK 189
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 374 NIILGTAEGLAYLHGGSETRIIHRDIKTSNILL--DKDFTPKIADFGLARCF 423
NI+ L YLH I HRDIK N L +K F K+ DFGL++ F
Sbjct: 172 NIMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEF 220
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 87
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF 145
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 146 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 277 KKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGC 335
+KLG+G V+ ++ N V VK L + ++ E+ ++ ++ + L
Sbjct: 43 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKK---NKIKREIKILENLRGGPNIITLAD 99
Query: 336 SIEGPES---LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSET 392
++ P S LV+E+V N Q L +++ RF + + L Y H
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRF-YMYEILKALDYCHSMG-- 151
Query: 393 RIIHRDIKTSNILLDKDFTP-KIADFGLARCF 423
I+HRD+K N+++D + ++ D+GLA +
Sbjct: 152 -IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 182
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 30 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 88
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF 146
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 147 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 87
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF 145
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 146 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 87
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF 145
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 146 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+E+ + T + F K LG G G V + G A+K L + +Q ++
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ-IEH 88
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EY P + F + + + RF
Sbjct: 89 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFSEPHARF 146
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+++D+ K+ DFG A+
Sbjct: 147 YAAQIVLT----FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 87
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF 145
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 146 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 87
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF 145
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 146 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLARCFAAD 426
GL +LH + II+RD+K N++LD + KIADFG+ + D
Sbjct: 132 GLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD 173
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 87
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF 145
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 146 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 87
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF 145
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 146 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGT 437
+HRDIK NILLD+ ++ADFG AD T S GT
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGT 226
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 87
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF 145
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 146 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 102
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
L KL + +V EY P + F + + + RF I+L
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFSEPHARFYAAQIVLT----FE 156
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+++D+ K+ DFG A+
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 102
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
L KL + +V EY P + F + + + RF I+L
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEM--FSHLRRIGRFSEPHARFYAAQIVLT----FE 156
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+++D+ K+ DFG A+
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 87
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF 145
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 146 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 50/125 (40%), Gaps = 22/125 (17%)
Query: 300 VKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIF 359
VKR I N R S+ H N+V+ + +V EY L + I
Sbjct: 62 VKREIINHR--------------SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERIC 107
Query: 360 DKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP--KIADF 417
N + RF G++Y H ++ HRD+K N LLD P KIADF
Sbjct: 108 --NAGRFSEDEARF-FFQQLISGVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADF 161
Query: 418 GLARC 422
G ++
Sbjct: 162 GYSKA 166
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+E+ + T + F + LG G G V + G A+K L + +Q ++
Sbjct: 30 KWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQ-IEH 88
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE + ++ LVKL + +V EY P + F + + + RF
Sbjct: 89 TLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM--FSHLRRIGRFSEPHARF 146
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ K+ADFG A+
Sbjct: 147 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK 190
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 87
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF 145
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 146 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 325 EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
+H N++ L +G +V E + L I + K + + ++ + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL---RQKFFSEREASAVLFTITKTVE 130
Query: 385 YLHGGSETRIIHRDIKTSNIL-LDKDFTP---KIADFGLARCFAAD 426
YLH ++HRD+K SNIL +D+ P +I DFG A+ A+
Sbjct: 131 YLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE 173
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
GL LH RI++RD+K NILLD +I+D GLA
Sbjct: 298 GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLA 420
GL LH RI++RD+K NILLD +I+D GLA
Sbjct: 298 GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 16/166 (9%)
Query: 270 TNYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRLIFNTRQWV----DEFFNEVNLISSI 324
T+ + ++LG+G V +P G A K I NT++ + E + +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAK--IINTKKLSARDHQKLEREARICRLL 60
Query: 325 EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
+H N+V+L E LV++ V L + I + + + IL +
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH-C 119
Query: 385 YLHGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLARCFAADR 427
+L+G I+HRD+K N+LL K K+ADFGLA D+
Sbjct: 120 HLNG-----IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ 160
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 325 EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
+H N++ L +G LV E + L I + K + + ++ + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL---RQKFFSEREASFVLHTIGKTVE 135
Query: 385 YLHGGSETRIIHRDIKTSNIL-LDKDFTP---KIADFGLARCFAAD 426
YLH ++HRD+K SNIL +D+ P +I DFG A+ A+
Sbjct: 136 YLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE 178
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 325 EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
+H N++ L +G LV E + L I + K + + ++ + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL---RQKFFSEREASFVLHTIGKTVE 135
Query: 385 YLHGGSETRIIHRDIKTSNIL-LDKDFTP---KIADFGLARCFAAD 426
YLH ++HRD+K SNIL +D+ P +I DFG A+ A+
Sbjct: 136 YLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE 178
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 16 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 74
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 75 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF 132
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 133 YAAQIVLT----FEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK 176
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 16/166 (9%)
Query: 270 TNYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRLIFNTRQWV----DEFFNEVNLISSI 324
T+ + ++LG+G V +P G A K I NT++ + E + +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAK--IINTKKLSARDHQKLEREARICRLL 60
Query: 325 EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
+H N+V+L E LV++ V L + I + + + IL +
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH-C 119
Query: 385 YLHGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLARCFAADR 427
+L+G I+HRD+K N+LL K K+ADFGLA D+
Sbjct: 120 HLNG-----IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ 160
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 18/157 (11%)
Query: 273 FNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDEFFNEVNLISSIEHK 327
F K LG G G V + + G A+K L + +Q ++ NE ++ ++
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVNFP 101
Query: 328 NLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF---NIILGTAEGLA 384
LVKL + +V EYV + F + + + RF I+L
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFYAAQIVLT----FE 155
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
YLH +I+RD+K N+L+D+ ++ DFG A+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 262 KYETLEKAT---NYFNPSKKLGQGGAGSVYM-GSLPNGTTVAVKRL----IFNTRQWVDE 313
K+ET + T + F+ K LG G G V + +G A+K L + +Q ++
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEH 87
Query: 314 FFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRF 373
NE ++ ++ LVKL + +V EYV + F + + + RF
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARF 145
Query: 374 ---NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
I+L YLH +I+RD+K N+++D+ ++ DFG A+
Sbjct: 146 YAAQIVLT----FEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAK 189
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGT 437
+HRDIK N+LLD + ++ADFG D T S+ GT
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGT 255
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 325 EHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
+H N++ L +G +V E L I + K + + ++ + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL---RQKFFSEREASAVLFTITKTVE 130
Query: 385 YLHGGSETRIIHRDIKTSNIL-LDKDFTP---KIADFGLARCFAAD 426
YLH ++HRD+K SNIL +D+ P +I DFG A+ A+
Sbjct: 131 YLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE 173
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 37/175 (21%)
Query: 263 YETLEKATNYFNPSKKLGQGGAGSVYMGS--LPNGTT--VAVKRLIFNTRQWVDEFFNEV 318
YE + + +N F K+G+G SVY+ + L G +A+K LI + + +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--------HPI 64
Query: 319 NLISSIE-------HKNLVKLLGCSIEGPESLLVYEYVPNRS----LDQFIFDKNKTKLL 367
+ + ++ N++ + C + ++ Y+ + S L+ F + + +L
Sbjct: 65 RIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYML 124
Query: 368 NWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLAR 421
N K L +H + I+HRD+K SN L ++ + DFGLA+
Sbjct: 125 NLFK----------ALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 326 HKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAY 385
H N+VKL + + LV E + L + I K K + + I+ +++
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERI---KKKKHFSETEASYIMRKLVSAVSH 121
Query: 386 LHGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLARCFAADRTHVSTA 433
+H + ++HRD+K N+L + + KI DFG AR D + T
Sbjct: 122 MH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP 169
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 395 IHRDIKTSNILLDKDFTPKIADFGLARCFAADRTHVSTAVAGT 437
+HRDIK N+LLD + ++ADFG D T S+ GT
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGT 239
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 93 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 150
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 151 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 265 TLEKATNYFNPSKKLGQGGAGSVYMGSLPNGTTVAVKRLIFNTRQWV----DEFFNEVNL 320
T + T+ + ++LG+G A SV + T I NT++ + E +
Sbjct: 25 TCTRFTDDYQLFEELGKG-AFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARI 83
Query: 321 ISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTA 380
++H N+V+L E LV++ V L + I + + + + IL
Sbjct: 84 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQIL--- 140
Query: 381 EGLAYLHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLA 420
E + ++H + I+HRD+K N+LL K K+ADFGLA
Sbjct: 141 ESVNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLA 180
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVNLISSIEH--KNL 329
LG GG GSVY G + + VA+K + + E N EV L+ + +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
++LL E P+S ++ P D F F + L R + E + + H
Sbjct: 72 IRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHNX 129
Query: 390 SETRIIHRDIKTSNILLDKDFTP-KIADFG 418
++HRDIK NIL+D + K+ DFG
Sbjct: 130 G---VLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 92 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 149
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 150 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 93 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 150
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 151 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 92 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 149
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 150 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 80 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 137
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 138 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 80 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 137
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 138 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 52 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 111
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 112 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 169
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 170 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 208
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 93 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 150
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 151 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 80 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 137
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 138 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 98
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 99 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 156
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 157 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 195
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 79 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 136
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 137 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 175
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 79 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 136
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 137 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 175
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 107 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 164
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 165 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 203
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 92 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 149
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 150 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 93 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 150
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 151 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 65 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 122
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 123 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 107 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 164
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 165 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 203
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 92 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 149
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 150 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 34.7 bits (78), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 65 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 122
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 123 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 63 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 120
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 121 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 159
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 64 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 121
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 122 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 160
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVNLISSIEH--KNL 329
LG GG GSVY G + + VA+K + + E N EV L+ + +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
++LL E P+S ++ P D F F + L R + E + + H
Sbjct: 72 IRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHNC 129
Query: 390 SETRIIHRDIKTSNILLDKDFTP-KIADFG 418
++HRDIK NIL+D + K+ DFG
Sbjct: 130 G---VLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 279 LGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVNLISSIEH--KNL 329
LG GG GSVY G + + VA+K + + E N EV L+ + +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 330 VKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGG 389
++LL E P+S ++ P D F F + L R + E + + H
Sbjct: 72 IRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCHNC 129
Query: 390 SETRIIHRDIKTSNILLDKDFTP-KIADFG 418
++HRDIK NIL+D + K+ DFG
Sbjct: 130 G---VLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 65 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 122
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 123 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 267 EKATNYFNPSKKLGQGGAGSVYMG-SLPNGTTVAVKRLIFNTRQWVDEFFN------EVN 319
E + + LG GG GSVY G + + VA+K + + E N EV
Sbjct: 27 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 86
Query: 320 LISSIEH--KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIIL 377
L+ + +++LL E P+S ++ P D F F + L R +
Sbjct: 87 LLKKVSSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELAR-SFFW 144
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFG 418
E + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 145 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 183
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 328 NLVKLLGCSIEGPES---LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
N++KL+ +++ P S LV+EY+ N Q L +++ RF + + L
Sbjct: 94 NIIKLID-TVKDPVSKTPALVFEYINNTDFKQLY-----QILTDFDIRF-YMYELLKALD 146
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCF 423
Y H I+HRD+K N+++D ++ D+GLA +
Sbjct: 147 YCHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFY 183
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Query: 276 SKKLGQGGAGSVYMG-SLPNGTTVAVK-----RLIFNTRQWVDEFFN---EVNLISSIEH 326
SK LG G G V + VA+K + + + D N E+ ++ + H
Sbjct: 21 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 80
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYL 386
++K+ + + +V E + L + + K F +L + YL
Sbjct: 81 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ---YL 136
Query: 387 HGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLARCF 423
H E IIHRD+K N+LL ++D KI DFG ++
Sbjct: 137 H---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 173
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Query: 276 SKKLGQGGAGSVYMG-SLPNGTTVAVK-----RLIFNTRQWVDEFFN---EVNLISSIEH 326
SK LG G G V + VA+K + + + D N E+ ++ + H
Sbjct: 14 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 73
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYL 386
++K+ + + +V E + L + + K F +L + YL
Sbjct: 74 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ---YL 129
Query: 387 HGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLARCF 423
H E IIHRD+K N+LL ++D KI DFG ++
Sbjct: 130 H---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 166
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLARCF 423
+ YLH E IIHRD+K N+LL ++D KI DFG ++
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Query: 276 SKKLGQGGAGSVYMG-SLPNGTTVAVK-----RLIFNTRQWVDEFFN---EVNLISSIEH 326
SK LG G G V + VA+K + + + D N E+ ++ + H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYL 386
++K+ + + +V E + L + + K F +L + YL
Sbjct: 75 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ---YL 130
Query: 387 HGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLARCF 423
H E IIHRD+K N+LL ++D KI DFG ++
Sbjct: 131 H---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Query: 276 SKKLGQGGAGSVYMG-SLPNGTTVAVK-----RLIFNTRQWVDEFFN---EVNLISSIEH 326
SK LG G G V + VA+K + + + D N E+ ++ + H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 327 KNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYL 386
++K+ + + +V E + L + + K F +L + YL
Sbjct: 75 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ---YL 130
Query: 387 HGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLARCF 423
H E IIHRD+K N+LL ++D KI DFG ++
Sbjct: 131 H---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 328 NLVKLLGCSIEGPES---LLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLA 384
N++KL+ +++ P S LV+EY+ N Q L +++ RF + + L
Sbjct: 99 NIIKLID-TVKDPVSKTPALVFEYINNTDFKQLY-----QILTDFDIRF-YMYELLKALD 151
Query: 385 YLHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCF 423
Y H I+HRD+K N+++D ++ D+GLA +
Sbjct: 152 YCHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFY 188
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 344 LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSN 403
LV+E+V N Q + L +++ RF + + L Y H I+HRD+K N
Sbjct: 111 LVFEHVNNTDFKQL-----RQTLTDYDIRF-YMYEILKALDYCHSMG---IMHRDVKPHN 161
Query: 404 ILLDKDFTP-KIADFGLARCF 423
+++D + ++ D+GLA +
Sbjct: 162 VMIDHEHRKLRLIDWGLAEFY 182
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLAR 421
+ YLH E IIHRD+K N+LL ++D KI DFG ++
Sbjct: 265 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 304
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 380 AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
A GL +L II+RD+K N++LD + KIADFG+ +
Sbjct: 131 AIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 169
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Query: 382 GLAYLHGGSETRIIHRDIKTSNILL---DKDFTPKIADFGLAR 421
+ YLH E IIHRD+K N+LL ++D KI DFG ++
Sbjct: 251 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 394 IIHRDIKTSNILLDKDFTPKIADFGLAR 421
II+RD+K N++LD + KIADFG+ +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCK 490
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 380 AEGLAYLHGGSETRIIHRDIKTSNILLDKDFTPKIADFGLAR 421
A L YLH I++RD+K NILLD + DFGL +
Sbjct: 149 ASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK 187
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 49/124 (39%), Gaps = 22/124 (17%)
Query: 300 VKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIF 359
VKR I N R S+ H N+V+ + +V EY L + I
Sbjct: 61 VKREIINHR--------------SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERIC 106
Query: 360 DKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP--KIADF 417
N + RF G++Y H ++ HRD+K N LLD P KI DF
Sbjct: 107 --NAGRFSEDEARF-FFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDF 160
Query: 418 GLAR 421
G ++
Sbjct: 161 GYSK 164
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 49/124 (39%), Gaps = 22/124 (17%)
Query: 300 VKRLIFNTRQWVDEFFNEVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIF 359
VKR I N R S+ H N+V+ + +V EY L + I
Sbjct: 62 VKREIINHR--------------SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERIC 107
Query: 360 DKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP--KIADF 417
N + RF G++Y H ++ HRD+K N LLD P KI DF
Sbjct: 108 --NAGRFSEDEARF-FFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDF 161
Query: 418 GLAR 421
G ++
Sbjct: 162 GYSK 165
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 374 NIILGTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP----KIADFGLARCF 423
+++ +G+ YLH ++HRD+K +NIL+ + KIAD G AR F
Sbjct: 132 SLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 344 LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSN 403
LV+E+V N Q L +++ RF + + L Y H I+HRD+K N
Sbjct: 111 LVFEHVNNTDFKQLY-----QTLTDYDIRF-YMYEILKALDYCHSMG---IMHRDVKPHN 161
Query: 404 ILLDKDFTP-KIADFGLARCF 423
+L+D + ++ D+GLA +
Sbjct: 162 VLIDHEHRKLRLIDWGLAEFY 182
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 18/106 (16%)
Query: 323 SIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFI-----FDKNKTKLLNWNKRFNIIL 377
S+ H N+V+ + ++ EY L + I F +++ + F +L
Sbjct: 72 SLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFF-----FQQLL 126
Query: 378 GTAEGLAYLHGGSETRIIHRDIKTSNILLDKDFTP--KIADFGLAR 421
G++Y H +I HRD+K N LLD P KI DFG ++
Sbjct: 127 S---GVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSK 166
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 328 NLVKLLGC--SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAY 385
N+VKLL L++EYV N F L +++ R+ I + L Y
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRY-YIYELLKALDY 141
Query: 386 LHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCF 423
H I+HRD+K N+++D + ++ D+GLA +
Sbjct: 142 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 177
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 328 NLVKLLGC--SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAY 385
N+VKLL L++EYV N F L +++ R+ I + L Y
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRY-YIYELLKALDY 142
Query: 386 LHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCF 423
H I+HRD+K N+++D + ++ D+GLA +
Sbjct: 143 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 178
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 328 NLVKLLGC--SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAY 385
N+VKLL L++EYV N F L +++ R+ I + L Y
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRY-YIYELLKALDY 141
Query: 386 LHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCF 423
H I+HRD+K N+++D + ++ D+GLA +
Sbjct: 142 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 177
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 328 NLVKLLGC--SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAY 385
N+VKLL L++EYV N F L +++ R+ I + L Y
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRY-YIYELLKALDY 161
Query: 386 LHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCF 423
H I+HRD+K N+++D + ++ D+GLA +
Sbjct: 162 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 197
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 328 NLVKLLGC--SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAY 385
N+VKLL L++EYV N F L +++ R+ I + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRY-YIYELLKALDY 140
Query: 386 LHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCF 423
H I+HRD+K N+++D + ++ D+GLA +
Sbjct: 141 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 317 EVNLISSIEHKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNII 376
E + ++H N+V+L E L+++ V L + I + + + I
Sbjct: 71 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI 130
Query: 377 LGTAEGLAYLHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLA 420
L E + + H + ++HRD+K N+LL K K+ADFGLA
Sbjct: 131 L---EAVLHCH---QMGVVHRDLKPENLLLASKLKGAAVKLADFGLA 171
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 328 NLVKLLGC--SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAY 385
N+VKLL L++EYV N F L +++ R+ I + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRY-YIYELLKALDY 140
Query: 386 LHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCF 423
H I+HRD+K N+++D + ++ D+GLA +
Sbjct: 141 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 328 NLVKLLGC--SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAY 385
N+VKLL L++EYV N F L +++ R+ I + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRY-YIYELLKALDY 140
Query: 386 LHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCF 423
H I+HRD+K N+++D + ++ D+GLA +
Sbjct: 141 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 328 NLVKLLGC--SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAY 385
N+VKLL L++EYV N F L +++ R+ I + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRY-YIYELLKALDY 140
Query: 386 LHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCF 423
H I+HRD+K N+++D + ++ D+GLA +
Sbjct: 141 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 328 NLVKLLGC--SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAY 385
N+VKLL L++EYV N F L +++ R+ I + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRY-YIYELLKALDY 140
Query: 386 LHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCF 423
H I+HRD+K N+++D + ++ D+GLA +
Sbjct: 141 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 328 NLVKLLGC--SIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAY 385
N+VKLL L++EYV N F L +++ R+ I + L Y
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTD-----FKVLYPTLTDYDIRY-YIYELLKALDY 140
Query: 386 LHGGSETRIIHRDIKTSNILLDKDFTP-KIADFGLARCF 423
H I+HRD+K N+++D + ++ D+GLA +
Sbjct: 141 CHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 344 LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSN 403
LV+E+V N Q L +++ RF + + L Y H I+HRD+K N
Sbjct: 111 LVFEHVNNTDFKQLY-----QTLTDYDIRF-YMYEILKALDYCHSMG---IMHRDVKPHN 161
Query: 404 ILLDKDFTP-KIADFGLARCF 423
+++D + ++ D+GLA +
Sbjct: 162 VMIDHEHRKLRLIDWGLAEFY 182
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 344 LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSN 403
LV+E+V N Q L +++ RF + + L Y H I+HRD+K N
Sbjct: 111 LVFEHVNNTDFKQLY-----QTLTDYDIRF-YMYEILKALDYCHSMG---IMHRDVKPHN 161
Query: 404 ILLDKDFTP-KIADFGLARCF 423
+++D + ++ D+GLA +
Sbjct: 162 VMIDHEHRKLRLIDWGLAEFY 182
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 268 KATNYFNPSKKLGQGGAGSVYMGS-LPNGTTVAVKRLIFNTRQWVDEFFNEVNLISSIE- 325
+ N F +K+G G G +Y+G+ + VA+K + N + + E + ++
Sbjct: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK--LENVKTKHPQLLYESKIYRILQG 61
Query: 326 HKNLVKLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAY 385
+ + +EG ++LV + + D F F K L + ++ E +
Sbjct: 62 GTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVE---F 118
Query: 386 LHGGSETRIIHRDIKTSNILLD---KDFTPKIADFGLARCFAADRTH 429
+H S +HRDIK N L+ + I DFGLA+ + TH
Sbjct: 119 VHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 344 LVYEYVPNRSLDQFIFDKNKTKLLNWNKRFNIILGTAEGLAYLHGGSETRIIHRDIKTSN 403
LV+E+V N Q L +++ RF + + L Y H I+HRD+K N
Sbjct: 111 LVFEHVNNTDFKQLY-----QTLTDYDIRF-YMYEILKALDYCHSMG---IMHRDVKPHN 161
Query: 404 ILLDKDFTP-KIADFGLARCF 423
+++D + ++ D+GLA +
Sbjct: 162 VMIDHEHRKLRLIDWGLAEFY 182
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,385,679
Number of Sequences: 62578
Number of extensions: 508112
Number of successful extensions: 2971
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 216
Number of HSP's that attempted gapping in prelim test: 1398
Number of HSP's gapped (non-prelim): 1089
length of query: 438
length of database: 14,973,337
effective HSP length: 102
effective length of query: 336
effective length of database: 8,590,381
effective search space: 2886368016
effective search space used: 2886368016
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)