Query 013684
Match_columns 438
No_of_seqs 404 out of 3737
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 15:10:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013684.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013684hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3idv_A Protein disulfide-isome 99.9 7.6E-26 2.6E-30 210.8 18.7 201 58-339 19-219 (241)
2 3ewl_A Uncharacterized conserv 99.9 6.4E-23 2.2E-27 175.0 14.2 118 211-339 2-125 (142)
3 3eur_A Uncharacterized protein 99.9 6.6E-23 2.2E-27 175.2 13.7 120 210-340 5-130 (142)
4 1i5g_A Tryparedoxin II; electr 99.9 7.3E-23 2.5E-27 175.3 13.1 127 212-347 3-133 (144)
5 2lrn_A Thiol:disulfide interch 99.9 1.3E-22 4.6E-27 175.4 14.9 119 211-340 4-126 (152)
6 3s9f_A Tryparedoxin; thioredox 99.9 8.1E-23 2.8E-27 179.7 12.5 141 36-189 21-164 (165)
7 2f9s_A Thiol-disulfide oxidore 99.9 2.5E-22 8.6E-27 173.3 14.5 139 212-375 2-141 (151)
8 4fo5_A Thioredoxin-like protei 99.9 7.2E-23 2.5E-27 175.2 10.8 119 211-340 8-130 (143)
9 3fw2_A Thiol-disulfide oxidore 99.9 5E-22 1.7E-26 171.4 15.5 119 211-340 6-133 (150)
10 1i5g_A Tryparedoxin II; electr 99.9 2.3E-22 7.8E-27 172.2 12.5 138 39-188 3-143 (144)
11 3gl3_A Putative thiol:disulfid 99.9 5.7E-22 2E-26 171.0 14.8 141 211-375 4-145 (152)
12 3u5r_E Uncharacterized protein 99.9 5.6E-22 1.9E-26 182.4 15.4 151 211-377 33-192 (218)
13 3drn_A Peroxiredoxin, bacterio 99.9 3E-22 1E-26 175.2 12.6 138 212-371 4-148 (161)
14 3hcz_A Possible thiol-disulfid 99.9 3.4E-22 1.2E-26 171.2 12.7 120 211-340 6-128 (148)
15 3s9f_A Tryparedoxin; thioredox 99.9 1.5E-22 5.2E-27 178.0 10.6 125 211-345 23-151 (165)
16 3lor_A Thiol-disulfide isomera 99.9 3.4E-22 1.1E-26 174.0 12.3 139 210-373 3-156 (160)
17 4g2e_A Peroxiredoxin; redox pr 99.9 3.4E-23 1.2E-27 180.7 5.8 137 212-369 6-155 (157)
18 3eyt_A Uncharacterized protein 99.9 5.2E-22 1.8E-26 172.5 13.3 137 212-373 2-153 (158)
19 3fkf_A Thiol-disulfide oxidore 99.9 7.2E-22 2.5E-26 169.2 13.3 119 211-340 6-131 (148)
20 1a8l_A Protein disulfide oxido 99.9 3E-21 1E-25 178.1 18.1 187 67-339 18-207 (226)
21 1o73_A Tryparedoxin; electron 99.9 9E-22 3.1E-26 168.3 13.3 138 38-188 3-143 (144)
22 1o8x_A Tryparedoxin, TRYX, TXN 99.9 8.6E-22 3E-26 169.1 12.1 139 38-189 3-144 (146)
23 3gkn_A Bacterioferritin comigr 99.9 9.5E-22 3.2E-26 172.0 12.3 138 211-371 8-161 (163)
24 1o8x_A Tryparedoxin, TRYX, TXN 99.9 1.5E-21 5.1E-26 167.6 13.3 124 212-345 4-131 (146)
25 1o73_A Tryparedoxin; electron 99.9 2.3E-21 7.9E-26 165.7 14.2 125 211-345 3-131 (144)
26 3kcm_A Thioredoxin family prot 99.9 1.2E-21 4.2E-26 169.3 11.6 119 211-340 3-123 (154)
27 3or5_A Thiol:disulfide interch 99.9 3.9E-21 1.3E-25 167.9 14.9 138 211-374 9-153 (165)
28 2lrt_A Uncharacterized protein 99.9 3.1E-21 1.1E-25 167.1 13.9 117 211-340 10-130 (152)
29 3eur_A Uncharacterized protein 99.9 8E-22 2.7E-26 168.5 9.8 124 37-173 5-131 (142)
30 4gqc_A Thiol peroxidase, perox 99.9 7.8E-23 2.7E-27 179.7 3.2 141 212-373 7-161 (164)
31 2l5o_A Putative thioredoxin; s 99.9 3.4E-21 1.2E-25 166.3 12.9 142 210-376 2-145 (153)
32 2cvb_A Probable thiol-disulfid 99.9 6.9E-21 2.4E-25 170.6 15.0 147 211-376 8-163 (188)
33 2lja_A Putative thiol-disulfid 99.9 4.7E-21 1.6E-25 165.2 12.7 119 212-340 5-125 (152)
34 3lwa_A Secreted thiol-disulfid 99.8 1.2E-20 4.2E-25 168.3 14.8 118 212-340 33-163 (183)
35 3raz_A Thioredoxin-related pro 99.8 1.2E-20 4E-25 162.9 13.4 114 215-340 4-122 (151)
36 1n8j_A AHPC, alkyl hydroperoxi 99.8 1.4E-20 4.7E-25 168.8 13.8 160 211-398 2-175 (186)
37 3ha9_A Uncharacterized thiored 99.8 5.9E-21 2E-25 167.2 11.0 116 210-338 11-145 (165)
38 3ixr_A Bacterioferritin comigr 99.8 4.5E-21 1.5E-25 170.9 9.8 136 213-371 28-177 (179)
39 3ewl_A Uncharacterized conserv 99.8 5.5E-21 1.9E-25 162.9 9.5 121 38-171 2-125 (142)
40 3erw_A Sporulation thiol-disul 99.8 1.2E-20 4.3E-25 160.7 11.5 118 211-340 10-131 (145)
41 1jfu_A Thiol:disulfide interch 99.8 2.7E-20 9.3E-25 166.4 13.7 119 212-340 36-160 (186)
42 4fo5_A Thioredoxin-like protei 99.8 3E-21 1E-25 165.1 7.1 121 38-173 8-131 (143)
43 1xvw_A Hypothetical protein RV 99.8 9.7E-21 3.3E-25 165.0 10.4 137 211-369 10-157 (160)
44 3kh7_A Thiol:disulfide interch 99.8 2.1E-20 7.2E-25 166.0 12.8 116 210-340 30-149 (176)
45 2bmx_A Alkyl hydroperoxidase C 99.8 1.5E-20 5E-25 169.8 11.5 140 212-372 6-170 (195)
46 1uul_A Tryparedoxin peroxidase 99.8 3.6E-20 1.2E-24 168.2 14.1 119 211-340 7-143 (202)
47 2ywi_A Hypothetical conserved 99.8 2.5E-20 8.6E-25 167.9 12.7 147 212-376 20-178 (196)
48 3ia1_A THIO-disulfide isomeras 99.8 4.9E-20 1.7E-24 159.2 13.9 136 211-375 6-147 (154)
49 2b5x_A YKUV protein, TRXY; thi 99.8 2.7E-20 9.2E-25 159.2 12.1 117 212-340 3-127 (148)
50 4evm_A Thioredoxin family prot 99.8 4E-20 1.4E-24 155.6 13.0 115 215-340 1-121 (138)
51 1zzo_A RV1677; thioredoxin fol 99.8 3E-20 1E-24 156.3 12.2 113 213-337 2-115 (136)
52 2ggt_A SCO1 protein homolog, m 99.8 9.6E-20 3.3E-24 159.0 15.3 119 215-340 2-143 (164)
53 1qmv_A Human thioredoxin perox 99.8 6.3E-20 2.1E-24 165.9 14.4 158 211-397 6-180 (197)
54 2c0d_A Thioredoxin peroxidase 99.8 4.4E-20 1.5E-24 170.0 13.5 119 211-340 26-162 (221)
55 2h01_A 2-Cys peroxiredoxin; th 99.8 3.2E-20 1.1E-24 167.1 12.3 139 212-371 2-158 (192)
56 1nm3_A Protein HI0572; hybrid, 99.8 4.9E-20 1.7E-24 172.0 14.0 119 38-173 4-141 (241)
57 1xzo_A BSSCO, hypothetical pro 99.8 3.1E-20 1.1E-24 163.9 11.8 141 211-372 8-172 (174)
58 3dwv_A Glutathione peroxidase- 99.8 1.4E-20 4.8E-25 168.8 9.5 138 212-373 22-184 (187)
59 1we0_A Alkyl hydroperoxide red 99.8 6.2E-20 2.1E-24 164.4 13.7 119 212-340 3-135 (187)
60 1lu4_A Soluble secreted antige 99.8 3.1E-20 1E-24 156.6 11.0 110 215-337 3-113 (136)
61 2pn8_A Peroxiredoxin-4; thiore 99.8 6E-20 2.1E-24 168.0 13.6 119 211-340 20-155 (211)
62 1psq_A Probable thiol peroxida 99.8 2.5E-20 8.6E-25 163.3 10.6 115 212-340 18-142 (163)
63 2ywm_A Glutaredoxin-like prote 99.8 2.3E-19 7.7E-24 165.9 17.6 176 69-336 19-199 (229)
64 3hdc_A Thioredoxin family prot 99.8 3.2E-20 1.1E-24 161.5 11.1 116 211-340 16-132 (158)
65 2i81_A 2-Cys peroxiredoxin; st 99.8 6.2E-20 2.1E-24 168.1 13.5 119 211-340 22-158 (213)
66 3apo_A DNAJ homolog subfamily 99.8 2.2E-20 7.5E-25 203.0 11.9 175 67-334 451-628 (780)
67 3fw2_A Thiol-disulfide oxidore 99.8 3.7E-20 1.3E-24 159.6 10.6 122 37-172 5-133 (150)
68 2p31_A CL683, glutathione pero 99.8 2.3E-20 7.7E-25 166.5 9.4 119 211-340 24-163 (181)
69 3ztl_A Thioredoxin peroxidase; 99.8 4.6E-20 1.6E-24 170.1 11.5 120 210-340 40-176 (222)
70 2lrt_A Uncharacterized protein 99.8 2.9E-20 9.8E-25 161.0 9.5 121 39-173 11-131 (152)
71 2p5q_A Glutathione peroxidase 99.8 6.5E-20 2.2E-24 161.0 11.5 119 211-340 7-150 (170)
72 1zye_A Thioredoxin-dependent p 99.8 1.6E-19 5.5E-24 166.2 14.5 141 211-372 28-185 (220)
73 2hyx_A Protein DIPZ; thioredox 99.8 9.8E-20 3.4E-24 178.5 13.7 119 211-340 52-181 (352)
74 2a4v_A Peroxiredoxin DOT5; yea 99.8 1.9E-20 6.4E-25 163.3 7.6 116 211-340 8-133 (159)
75 2ls5_A Uncharacterized protein 99.7 1.3E-21 4.4E-26 170.4 0.0 118 212-340 9-131 (159)
76 3cmi_A Peroxiredoxin HYR1; thi 99.8 4.3E-20 1.5E-24 163.0 9.8 116 213-340 9-150 (171)
77 3p7x_A Probable thiol peroxida 99.8 2.8E-20 9.7E-25 163.4 8.5 115 212-340 22-145 (166)
78 2jsy_A Probable thiol peroxida 99.8 2.6E-20 8.7E-25 163.7 8.1 116 212-340 20-144 (167)
79 2lrn_A Thiol:disulfide interch 99.8 4.3E-20 1.5E-24 159.5 9.3 121 38-172 4-126 (152)
80 2vup_A Glutathione peroxidase- 99.8 8.9E-20 3E-24 163.9 11.7 118 212-340 24-167 (190)
81 2lus_A Thioredoxion; CR-Trp16, 99.7 1.5E-21 5.1E-26 166.4 0.0 122 215-344 3-129 (143)
82 2rli_A SCO2 protein homolog, m 99.8 4.6E-19 1.6E-23 155.8 15.4 117 217-340 7-146 (171)
83 2hls_A Protein disulfide oxido 99.8 1.9E-18 6.6E-23 161.4 20.5 181 71-339 25-209 (243)
84 1q98_A Thiol peroxidase, TPX; 99.8 4.4E-20 1.5E-24 162.1 8.7 115 212-340 19-146 (165)
85 3kij_A Probable glutathione pe 99.8 9E-20 3.1E-24 162.4 10.9 122 208-340 10-152 (180)
86 1kng_A Thiol:disulfide interch 99.8 1.4E-19 4.6E-24 156.6 11.3 115 211-339 9-133 (156)
87 3qpm_A Peroxiredoxin; oxidored 99.8 4.7E-19 1.6E-23 165.1 15.7 119 211-340 49-184 (240)
88 2h30_A Thioredoxin, peptide me 99.8 7E-20 2.4E-24 159.9 9.5 111 220-340 22-138 (164)
89 1tp9_A Peroxiredoxin, PRX D (t 99.8 8E-20 2.7E-24 160.0 9.8 117 211-340 5-143 (162)
90 2v1m_A Glutathione peroxidase; 99.8 1.2E-19 4.2E-24 159.1 10.9 119 211-340 6-149 (169)
91 2yzh_A Probable thiol peroxida 99.8 7.2E-20 2.5E-24 161.6 9.4 114 212-340 23-149 (171)
92 2f8a_A Glutathione peroxidase 99.8 2.7E-19 9.4E-24 163.2 13.4 118 212-340 22-189 (208)
93 1zof_A Alkyl hydroperoxide-red 99.8 2.1E-19 7.3E-24 162.5 12.6 118 212-340 3-139 (198)
94 3fkf_A Thiol-disulfide oxidore 99.8 9.9E-20 3.4E-24 155.8 9.7 125 36-173 4-132 (148)
95 3drn_A Peroxiredoxin, bacterio 99.8 1.2E-19 4E-24 158.6 9.4 120 38-173 3-128 (161)
96 2obi_A PHGPX, GPX-4, phospholi 99.8 1.3E-19 4.4E-24 161.8 9.9 119 211-340 22-166 (183)
97 3zrd_A Thiol peroxidase; oxido 99.8 8.2E-20 2.8E-24 165.7 8.7 115 212-340 54-181 (200)
98 3hcz_A Possible thiol-disulfid 99.8 4E-20 1.4E-24 158.2 6.1 123 38-173 6-129 (148)
99 2wfc_A Peroxiredoxin 5, PRDX5; 99.8 3.1E-19 1E-23 157.1 11.9 116 212-340 5-139 (167)
100 2gs3_A PHGPX, GPX-4, phospholi 99.8 2.9E-19 1E-23 159.9 11.4 118 212-340 25-168 (185)
101 2b1k_A Thiol:disulfide interch 99.8 1.5E-19 5.3E-24 158.6 9.3 115 211-340 23-142 (168)
102 3me7_A Putative uncharacterize 99.8 5.1E-19 1.7E-23 156.2 12.5 139 212-372 3-162 (170)
103 4hde_A SCO1/SENC family lipopr 99.8 6.3E-19 2.1E-23 155.6 12.6 143 209-371 5-169 (170)
104 3uem_A Protein disulfide-isome 99.8 6.4E-19 2.2E-23 174.2 14.1 192 71-336 135-335 (361)
105 3mng_A Peroxiredoxin-5, mitoch 99.8 3.8E-19 1.3E-23 157.3 10.8 120 209-340 14-153 (173)
106 3uma_A Hypothetical peroxiredo 99.8 1.3E-19 4.5E-24 161.9 7.8 136 211-366 27-183 (184)
107 1xvq_A Thiol peroxidase; thior 99.8 2.1E-19 7.3E-24 159.3 9.2 115 212-340 20-145 (175)
108 2i3y_A Epididymal secretory gl 99.8 1E-18 3.6E-23 159.9 14.0 134 213-372 32-211 (215)
109 2f9s_A Thiol-disulfide oxidore 99.8 1.6E-19 5.5E-24 155.5 7.9 119 39-172 2-120 (151)
110 3gl3_A Putative thiol:disulfid 99.8 3.5E-19 1.2E-23 153.4 9.6 120 38-173 4-123 (152)
111 2pwj_A Mitochondrial peroxired 99.8 3.5E-19 1.2E-23 157.4 9.4 118 211-340 8-151 (171)
112 3tjj_A Peroxiredoxin-4; thiore 99.8 1.2E-18 4.1E-23 163.5 12.7 119 211-340 63-198 (254)
113 3u5r_E Uncharacterized protein 99.8 2.2E-19 7.5E-24 165.1 7.3 122 37-173 32-161 (218)
114 2b7k_A SCO1 protein; metalloch 99.8 2.4E-18 8.4E-23 155.9 14.1 124 210-340 13-161 (200)
115 4g2e_A Peroxiredoxin; redox pr 99.8 5.3E-20 1.8E-24 160.3 2.9 120 38-173 5-136 (157)
116 2lus_A Thioredoxion; CR-Trp16, 99.6 2.1E-20 7.1E-25 159.3 0.0 125 42-178 3-131 (143)
117 2lja_A Putative thiol-disulfid 99.8 3.4E-19 1.1E-23 153.5 7.4 120 38-172 4-125 (152)
118 3eyt_A Uncharacterized protein 99.8 1.9E-19 6.3E-24 156.3 5.8 122 39-173 2-135 (158)
119 3lor_A Thiol-disulfide isomera 99.8 1.4E-19 4.6E-24 157.4 4.8 124 37-173 3-138 (160)
120 3kcm_A Thioredoxin family prot 99.8 5.1E-19 1.7E-23 152.7 8.0 121 38-173 3-124 (154)
121 2b5e_A Protein disulfide-isome 99.8 5.1E-18 1.7E-22 175.3 17.0 66 70-161 30-95 (504)
122 2r37_A Glutathione peroxidase 99.8 2.8E-18 9.7E-23 156.2 13.1 116 213-340 14-175 (207)
123 1nm3_A Protein HI0572; hybrid, 99.8 5.7E-19 1.9E-23 164.8 8.3 119 211-340 4-140 (241)
124 3apo_A DNAJ homolog subfamily 99.8 2.3E-18 7.7E-23 187.1 14.1 181 71-339 563-744 (780)
125 3ha9_A Uncharacterized thiored 99.8 1.4E-18 4.8E-23 152.0 9.5 118 35-170 9-145 (165)
126 3or5_A Thiol:disulfide interch 99.8 1.2E-18 4.1E-23 152.0 8.7 120 37-172 8-133 (165)
127 2k6v_A Putative cytochrome C o 99.8 9.5E-19 3.3E-23 153.9 8.0 119 211-340 11-153 (172)
128 3kh7_A Thiol:disulfide interch 99.8 5.2E-19 1.8E-23 156.9 6.4 119 36-173 29-150 (176)
129 3erw_A Sporulation thiol-disul 99.8 9.2E-19 3.2E-23 149.0 7.7 121 36-172 8-131 (145)
130 2v2g_A Peroxiredoxin 6; oxidor 99.8 5E-18 1.7E-22 157.2 12.7 118 211-340 4-143 (233)
131 3sbc_A Peroxiredoxin TSA1; alp 99.7 5.5E-18 1.9E-22 153.7 12.3 122 208-340 21-159 (216)
132 3me7_A Putative uncharacterize 99.7 2.3E-18 7.8E-23 152.0 9.2 124 38-172 2-143 (170)
133 2l5o_A Putative thioredoxin; s 99.7 1.9E-18 6.4E-23 149.0 8.1 121 37-172 2-123 (153)
134 4gqc_A Thiol peroxidase, perox 99.7 2.1E-19 7.1E-24 157.8 2.0 120 38-173 6-138 (164)
135 3lwa_A Secreted thiol-disulfid 99.7 2.3E-18 7.7E-23 153.5 8.7 121 38-173 32-164 (183)
136 3raz_A Thioredoxin-related pro 99.7 2.3E-18 8E-23 148.4 8.4 108 59-173 12-123 (151)
137 1xzo_A BSSCO, hypothetical pro 99.7 2.4E-18 8.3E-23 151.6 8.6 125 38-173 8-153 (174)
138 3gkn_A Bacterioferritin comigr 99.7 2.5E-18 8.7E-23 150.1 8.5 122 37-172 7-141 (163)
139 2p31_A CL683, glutathione pero 99.7 1E-18 3.4E-23 155.8 6.0 125 35-173 21-164 (181)
140 3keb_A Probable thiol peroxida 99.7 2.2E-18 7.7E-23 157.4 8.4 115 211-341 23-154 (224)
141 3dwv_A Glutathione peroxidase- 99.7 1.1E-18 3.6E-23 156.5 6.1 123 38-173 21-166 (187)
142 3ixr_A Bacterioferritin comigr 99.7 1.9E-18 6.5E-23 153.8 7.5 118 39-172 23-157 (179)
143 2v1m_A Glutathione peroxidase; 99.7 3.6E-18 1.2E-22 149.7 9.1 125 36-173 4-150 (169)
144 3cmi_A Peroxiredoxin HYR1; thi 99.7 2.7E-18 9.3E-23 151.4 7.9 121 39-173 8-151 (171)
145 3kij_A Probable glutathione pe 99.7 4.6E-18 1.6E-22 151.3 9.4 122 38-173 13-153 (180)
146 1prx_A HORF6; peroxiredoxin, h 99.7 1.4E-17 4.6E-22 153.6 12.7 117 211-340 6-147 (224)
147 3hdc_A Thioredoxin family prot 99.7 2.2E-18 7.4E-23 149.8 6.9 118 38-173 16-133 (158)
148 2ggt_A SCO1 protein homolog, m 99.7 1.4E-17 4.7E-22 145.2 11.8 120 42-173 2-144 (164)
149 1jfu_A Thiol:disulfide interch 99.7 3.3E-18 1.1E-22 152.8 7.6 121 38-173 35-161 (186)
150 2cvb_A Probable thiol-disulfid 99.7 3.6E-18 1.2E-22 152.8 7.7 119 38-172 8-133 (188)
151 4hde_A SCO1/SENC family lipopr 99.7 1.1E-17 3.9E-22 147.5 10.5 123 39-172 8-150 (170)
152 1xcc_A 1-Cys peroxiredoxin; un 99.7 1.7E-17 5.8E-22 152.5 12.0 117 211-340 4-144 (220)
153 1xvw_A Hypothetical protein RV 99.7 2.7E-18 9.1E-23 149.4 6.1 122 38-173 10-139 (160)
154 1we0_A Alkyl hydroperoxide red 99.7 6.4E-18 2.2E-22 151.3 8.7 120 38-173 2-136 (187)
155 2ls5_A Uncharacterized protein 99.6 3.2E-19 1.1E-23 155.1 0.0 122 37-173 7-132 (159)
156 2p5q_A Glutathione peroxidase 99.7 1.2E-17 4.2E-22 146.4 10.1 124 37-173 6-151 (170)
157 2f8a_A Glutathione peroxidase 99.7 1.1E-17 3.6E-22 152.6 10.1 123 38-173 21-190 (208)
158 2c0d_A Thioredoxin peroxidase 99.7 5.1E-18 1.7E-22 156.1 7.7 121 37-173 25-163 (221)
159 2obi_A PHGPX, GPX-4, phospholi 99.7 7.4E-18 2.5E-22 150.3 8.4 125 36-173 20-167 (183)
160 3a2v_A Probable peroxiredoxin; 99.7 2E-17 6.9E-22 154.2 11.6 117 211-340 6-140 (249)
161 2ywi_A Hypothetical conserved 99.7 2.8E-18 9.7E-23 154.4 5.7 121 38-173 19-148 (196)
162 1zzo_A RV1677; thioredoxin fol 99.7 8.2E-18 2.8E-22 141.3 8.0 113 40-169 2-115 (136)
163 2gs3_A PHGPX, GPX-4, phospholi 99.7 8.4E-18 2.9E-22 150.3 8.4 124 37-173 23-169 (185)
164 1lu4_A Soluble secreted antige 99.7 7.5E-18 2.6E-22 141.8 7.5 111 42-169 3-113 (136)
165 3ia1_A THIO-disulfide isomeras 99.7 1.2E-17 4.1E-22 144.1 9.0 120 37-173 5-127 (154)
166 2rli_A SCO2 protein homolog, m 99.7 3.6E-17 1.2E-21 143.6 11.9 114 56-173 11-147 (171)
167 2wfc_A Peroxiredoxin 5, PRDX5; 99.7 5.6E-18 1.9E-22 149.0 6.5 119 38-173 4-140 (167)
168 2b5x_A YKUV protein, TRXY; thi 99.7 4.5E-18 1.5E-22 145.2 5.7 120 38-173 2-128 (148)
169 2h30_A Thioredoxin, peptide me 99.7 3.7E-18 1.3E-22 148.8 5.2 111 56-172 23-138 (164)
170 2vup_A Glutathione peroxidase- 99.7 5.9E-18 2E-22 152.0 6.5 126 35-173 20-168 (190)
171 4evm_A Thioredoxin family prot 99.7 8.3E-18 2.8E-22 141.2 6.9 116 42-173 1-122 (138)
172 1n8j_A AHPC, alkyl hydroperoxi 99.7 6.4E-18 2.2E-22 151.3 6.5 120 38-173 2-135 (186)
173 1q98_A Thiol peroxidase, TPX; 99.7 1E-17 3.4E-22 147.0 7.6 119 38-173 18-147 (165)
174 2h01_A 2-Cys peroxiredoxin; th 99.7 9.5E-18 3.3E-22 150.8 7.6 119 39-173 2-138 (192)
175 1zof_A Alkyl hydroperoxide-red 99.7 9.7E-18 3.3E-22 151.5 7.6 120 38-173 2-140 (198)
176 2b7k_A SCO1 protein; metalloch 99.7 2.7E-17 9.1E-22 149.0 10.4 127 35-173 11-162 (200)
177 2bmx_A Alkyl hydroperoxidase C 99.7 9.9E-18 3.4E-22 151.1 7.5 120 38-173 5-149 (195)
178 3tue_A Tryparedoxin peroxidase 99.7 4.3E-17 1.5E-21 148.2 11.6 119 211-340 27-163 (219)
179 2i81_A 2-Cys peroxiredoxin; st 99.7 1.2E-17 4E-22 152.9 7.3 122 36-173 20-159 (213)
180 2jsy_A Probable thiol peroxida 99.7 1.5E-17 5.3E-22 145.8 7.6 119 38-173 19-145 (167)
181 3zrd_A Thiol peroxidase; oxido 99.7 1.3E-17 4.4E-22 151.1 7.2 119 38-173 53-182 (200)
182 3ztl_A Thioredoxin peroxidase; 99.7 1.2E-17 4.2E-22 153.8 7.1 121 35-173 38-177 (222)
183 2pn8_A Peroxiredoxin-4; thiore 99.7 1.2E-17 4.3E-22 152.5 6.5 122 36-173 18-156 (211)
184 1psq_A Probable thiol peroxida 99.7 1.2E-17 3.9E-22 146.2 6.0 118 38-173 17-143 (163)
185 1uul_A Tryparedoxin peroxidase 99.7 1.8E-17 6.1E-22 150.4 7.4 120 38-173 7-144 (202)
186 1qmv_A Human thioredoxin perox 99.7 2.1E-17 7.2E-22 149.2 7.6 120 38-173 6-142 (197)
187 2b1k_A Thiol:disulfide interch 99.7 9.8E-18 3.3E-22 147.0 5.0 118 37-173 22-143 (168)
188 1zye_A Thioredoxin-dependent p 99.7 4E-17 1.4E-21 150.1 8.7 122 36-173 26-164 (220)
189 2r37_A Glutathione peroxidase 99.7 3E-16 1E-20 142.8 14.3 122 38-173 12-176 (207)
190 3p7x_A Probable thiol peroxida 99.7 1.2E-17 4.3E-22 146.5 4.9 117 38-173 21-146 (166)
191 3qpm_A Peroxiredoxin; oxidored 99.7 3.6E-17 1.2E-21 152.4 8.1 120 38-173 49-185 (240)
192 1kng_A Thiol:disulfide interch 99.7 1.7E-17 5.7E-22 143.3 5.2 119 36-172 7-134 (156)
193 1tp9_A Peroxiredoxin, PRX D (t 99.7 3.6E-17 1.2E-21 143.0 6.7 119 38-173 5-144 (162)
194 2i3y_A Epididymal secretory gl 99.7 2.7E-16 9.3E-21 143.8 12.6 121 39-173 31-194 (215)
195 2a4v_A Peroxiredoxin DOT5; yea 99.7 1.7E-17 5.8E-22 144.4 4.4 118 38-173 8-134 (159)
196 1xvq_A Thiol peroxidase; thior 99.7 4E-17 1.4E-21 144.6 6.4 117 38-173 19-146 (175)
197 2yzh_A Probable thiol peroxida 99.7 3.4E-17 1.2E-21 144.3 5.6 117 38-173 22-150 (171)
198 2hyx_A Protein DIPZ; thioredox 99.7 5.3E-17 1.8E-21 159.1 7.4 127 37-173 51-182 (352)
199 3tjj_A Peroxiredoxin-4; thiore 99.7 9.4E-17 3.2E-21 150.6 7.4 121 37-173 62-199 (254)
200 4eo3_A Bacterioferritin comigr 99.6 5.6E-16 1.9E-20 150.3 12.4 110 215-340 3-118 (322)
201 3mng_A Peroxiredoxin-5, mitoch 99.6 1E-16 3.6E-21 141.6 6.3 121 36-173 14-154 (173)
202 3uma_A Hypothetical peroxiredo 99.6 5.8E-17 2E-21 144.7 3.4 120 37-173 26-165 (184)
203 2k6v_A Putative cytochrome C o 99.6 1.4E-16 4.8E-21 139.9 5.5 122 38-173 11-154 (172)
204 2v2g_A Peroxiredoxin 6; oxidor 99.6 2.2E-16 7.6E-21 146.1 6.0 119 38-173 4-144 (233)
205 1v5n_A PDI-like hypothetical p 99.6 1.8E-16 6.1E-21 122.9 3.9 81 349-433 1-82 (89)
206 3zzx_A Thioredoxin; oxidoreduc 99.6 1.8E-15 6.2E-20 122.3 10.0 73 233-340 17-89 (105)
207 2l57_A Uncharacterized protein 99.6 2.3E-15 7.9E-20 125.4 10.3 113 216-374 6-119 (126)
208 1prx_A HORF6; peroxiredoxin, h 99.6 3.8E-16 1.3E-20 143.9 5.8 120 37-173 5-148 (224)
209 3hxs_A Thioredoxin, TRXP; elec 99.6 3.2E-15 1.1E-19 127.0 10.9 84 222-339 38-121 (141)
210 3keb_A Probable thiol peroxida 99.6 8.2E-16 2.8E-20 140.4 6.8 116 38-173 23-154 (224)
211 3q6o_A Sulfhydryl oxidase 1; p 99.6 5.6E-14 1.9E-18 131.0 19.4 70 70-161 29-98 (244)
212 2pwj_A Mitochondrial peroxired 99.6 5.5E-16 1.9E-20 136.8 5.0 121 36-173 6-152 (171)
213 1xcc_A 1-Cys peroxiredoxin; un 99.6 7.3E-16 2.5E-20 141.6 5.7 119 38-173 4-145 (220)
214 3ul3_B Thioredoxin, thioredoxi 99.6 1.1E-14 3.9E-19 121.7 11.8 90 215-340 23-112 (128)
215 2fwh_A Thiol:disulfide interch 99.6 1.5E-15 5E-20 128.3 5.0 96 211-337 5-105 (134)
216 4f82_A Thioredoxin reductase; 99.6 4.8E-15 1.6E-19 130.3 8.3 117 211-340 11-155 (176)
217 3a2v_A Probable peroxiredoxin; 99.6 1.6E-15 5.5E-20 141.3 5.5 118 38-173 6-141 (249)
218 3sbc_A Peroxiredoxin TSA1; alp 99.6 3.9E-15 1.3E-19 135.0 7.6 121 36-172 22-159 (216)
219 3idv_A Protein disulfide-isome 99.6 3.3E-15 1.1E-19 138.6 6.6 140 222-412 19-170 (241)
220 2ju5_A Thioredoxin disulfide i 99.5 5.6E-15 1.9E-19 127.9 6.4 93 224-339 36-132 (154)
221 3p2a_A Thioredoxin 2, putative 99.5 3.1E-14 1E-18 122.1 10.8 114 213-375 32-146 (148)
222 3t58_A Sulfhydryl oxidase 1; o 99.5 1.2E-13 4.2E-18 142.1 16.8 190 70-339 29-221 (519)
223 3fk8_A Disulphide isomerase; A 99.5 4.9E-14 1.7E-18 118.4 11.2 78 234-341 27-109 (133)
224 2av4_A Thioredoxin-like protei 99.5 3.5E-14 1.2E-18 121.0 9.4 69 235-337 40-108 (160)
225 3f3q_A Thioredoxin-1; His TAG, 99.5 2.6E-14 9E-19 116.0 7.4 71 234-339 22-92 (109)
226 3tue_A Tryparedoxin peroxidase 99.5 2.9E-14 9.8E-19 129.5 7.7 124 37-172 26-163 (219)
227 2xhf_A Peroxiredoxin 5; oxidor 99.5 4.1E-14 1.4E-18 124.1 7.9 118 211-340 15-149 (171)
228 2l5l_A Thioredoxin; structural 99.5 1.6E-13 5.6E-18 115.9 11.3 71 235-338 37-107 (136)
229 3qfa_C Thioredoxin; protein-pr 99.5 4.9E-14 1.7E-18 115.7 7.7 72 233-339 28-99 (116)
230 3d22_A TRXH4, thioredoxin H-ty 99.5 5.5E-14 1.9E-18 119.0 7.9 93 234-376 44-136 (139)
231 2voc_A Thioredoxin; electron t 99.5 1.8E-13 6.3E-18 111.4 10.3 71 235-339 16-86 (112)
232 3f9u_A Putative exported cytoc 99.5 4E-14 1.4E-18 124.6 6.6 103 228-340 39-147 (172)
233 3f8u_A Protein disulfide-isome 99.5 1.2E-12 4E-17 134.2 18.4 197 89-375 255-464 (481)
234 3hxs_A Thioredoxin, TRXP; elec 99.5 1.2E-13 4.1E-18 117.2 9.2 84 56-169 36-119 (141)
235 2kuc_A Putative disulphide-iso 99.5 1.3E-13 4.4E-18 115.2 9.2 81 228-339 19-102 (130)
236 2trx_A Thioredoxin; electron t 99.5 3E-13 1E-17 109.0 11.0 71 235-339 19-89 (108)
237 3tco_A Thioredoxin (TRXA-1); d 99.5 1.3E-13 4.4E-18 111.1 8.7 83 222-339 8-90 (109)
238 2qsi_A Putative hydrogenase ex 99.5 1.2E-13 4E-18 115.9 8.4 70 237-340 34-105 (137)
239 4euy_A Uncharacterized protein 99.5 1.5E-13 5.1E-18 110.5 8.5 70 235-339 17-86 (105)
240 2pu9_C TRX-F, thioredoxin F-ty 99.5 2E-13 6.9E-18 110.8 9.3 73 233-339 21-93 (111)
241 3d6i_A Monothiol glutaredoxin- 99.5 1.4E-13 4.7E-18 111.9 8.2 72 235-339 20-91 (112)
242 3ul3_B Thioredoxin, thioredoxi 99.5 1.1E-13 3.6E-18 115.7 7.5 84 58-172 29-112 (128)
243 2qgv_A Hydrogenase-1 operon pr 99.5 3.9E-14 1.3E-18 119.3 4.8 95 235-376 33-129 (140)
244 1t00_A Thioredoxin, TRX; redox 99.5 3.5E-13 1.2E-17 109.4 10.4 71 235-339 22-92 (112)
245 2o8v_B Thioredoxin 1; disulfid 99.4 2.6E-13 9E-18 113.5 9.7 83 222-339 26-109 (128)
246 1xfl_A Thioredoxin H1; AT3G510 99.4 3.4E-13 1.2E-17 112.1 10.3 71 234-339 36-106 (124)
247 3gix_A Thioredoxin-like protei 99.4 1.6E-13 5.6E-18 118.0 8.6 69 235-337 22-90 (149)
248 3die_A Thioredoxin, TRX; elect 99.4 3.2E-13 1.1E-17 108.2 9.8 71 235-339 18-88 (106)
249 1dby_A Chloroplast thioredoxin 99.4 4.4E-13 1.5E-17 107.8 10.5 71 235-339 18-88 (107)
250 1nsw_A Thioredoxin, TRX; therm 99.4 2.2E-13 7.4E-18 109.2 8.6 71 235-339 16-86 (105)
251 2l57_A Uncharacterized protein 99.4 1.1E-13 3.7E-18 115.1 6.8 88 56-171 11-98 (126)
252 1z6n_A Hypothetical protein PA 99.4 1E-13 3.6E-18 121.4 6.8 77 230-340 48-127 (167)
253 1gh2_A Thioredoxin-like protei 99.4 3.8E-13 1.3E-17 108.4 9.6 70 235-339 20-89 (107)
254 3zzx_A Thioredoxin; oxidoreduc 99.4 1.7E-13 5.8E-18 110.6 7.4 74 67-172 16-89 (105)
255 1xiy_A Peroxiredoxin, pfaop; a 99.4 2.3E-13 7.9E-18 120.7 8.9 116 212-340 3-151 (182)
256 4eo3_A Bacterioferritin comigr 99.4 1.9E-13 6.6E-18 132.4 9.0 111 41-171 2-117 (322)
257 3h79_A Thioredoxin-like protei 99.4 1.1E-12 3.9E-17 109.2 12.5 86 222-336 19-105 (127)
258 2dj3_A Protein disulfide-isome 99.4 4.5E-13 1.5E-17 112.3 10.0 83 222-336 11-94 (133)
259 2dj1_A Protein disulfide-isome 99.4 6E-13 2.1E-17 112.6 10.9 85 222-338 21-105 (140)
260 1w4v_A Thioredoxin, mitochondr 99.4 5.4E-13 1.8E-17 109.9 10.2 71 235-339 30-100 (119)
261 2dml_A Protein disulfide-isome 99.4 3.6E-13 1.2E-17 112.5 9.0 71 235-338 34-104 (130)
262 1thx_A Thioredoxin, thioredoxi 99.4 6.8E-13 2.3E-17 107.9 10.4 71 235-339 24-94 (115)
263 3cxg_A Putative thioredoxin; m 99.4 1.8E-13 6.3E-18 115.3 7.2 74 231-339 35-111 (133)
264 3ph9_A Anterior gradient prote 99.4 1.1E-13 3.8E-18 119.0 5.8 106 232-374 40-147 (151)
265 3m9j_A Thioredoxin; oxidoreduc 99.4 4.1E-13 1.4E-17 107.5 8.7 71 234-339 18-88 (105)
266 1x5e_A Thioredoxin domain cont 99.4 8.6E-13 2.9E-17 109.6 11.0 69 237-338 23-91 (126)
267 2ppt_A Thioredoxin-2; thiredox 99.4 6.9E-13 2.3E-17 114.9 10.8 71 235-339 63-133 (155)
268 3gnj_A Thioredoxin domain prot 99.4 7.1E-13 2.4E-17 107.2 10.2 71 235-339 21-91 (111)
269 2i4a_A Thioredoxin; acidophIle 99.4 9.7E-13 3.3E-17 105.5 10.9 71 235-339 19-89 (107)
270 1ep7_A Thioredoxin CH1, H-type 99.4 5.5E-13 1.9E-17 108.1 9.4 70 236-339 24-93 (112)
271 1x5d_A Protein disulfide-isome 99.4 1.6E-12 5.6E-17 108.7 12.5 75 235-339 24-98 (133)
272 2wz9_A Glutaredoxin-3; protein 99.4 6E-13 2E-17 114.8 9.8 89 235-373 31-119 (153)
273 1qgv_A Spliceosomal protein U5 99.4 1.1E-12 3.7E-17 111.9 10.7 71 235-339 22-92 (142)
274 3hz4_A Thioredoxin; NYSGXRC, P 99.4 1E-12 3.5E-17 111.6 10.5 71 235-339 23-93 (140)
275 1r26_A Thioredoxin; redox-acti 99.4 7.4E-13 2.5E-17 110.3 9.4 71 234-339 35-105 (125)
276 1xwb_A Thioredoxin; dimerizati 99.4 1.2E-12 4.3E-17 104.7 10.2 72 234-339 18-89 (106)
277 1sen_A Thioredoxin-like protei 99.4 2.1E-14 7.3E-19 125.6 -0.3 80 228-339 38-119 (164)
278 2fwh_A Thiol:disulfide interch 99.4 4.6E-14 1.6E-18 119.0 1.7 97 39-169 6-105 (134)
279 2vlu_A Thioredoxin, thioredoxi 99.4 1.2E-12 3.9E-17 108.1 9.9 70 235-339 33-102 (122)
280 2f51_A Thioredoxin; electron t 99.4 6.2E-13 2.1E-17 109.5 8.1 71 235-339 22-95 (118)
281 4f82_A Thioredoxin reductase; 99.4 1.9E-13 6.5E-18 120.1 4.9 119 38-173 11-156 (176)
282 1faa_A Thioredoxin F; electron 99.4 1E-12 3.6E-17 108.7 9.2 73 233-339 34-106 (124)
283 1fb6_A Thioredoxin M; electron 99.4 1.8E-12 6.2E-17 103.6 10.1 71 235-339 17-87 (105)
284 2yzu_A Thioredoxin; redox prot 99.4 1.6E-12 5.4E-17 104.5 9.7 71 235-339 17-87 (109)
285 2j23_A Thioredoxin; immune pro 99.4 7.5E-13 2.6E-17 109.4 7.9 72 235-339 32-103 (121)
286 2xc2_A Thioredoxinn; oxidoredu 99.4 6.8E-13 2.3E-17 108.7 7.6 72 232-339 29-100 (117)
287 2lst_A Thioredoxin; structural 99.1 3.9E-14 1.3E-18 118.5 0.0 83 225-339 9-97 (130)
288 3aps_A DNAJ homolog subfamily 99.4 6.4E-13 2.2E-17 109.6 7.4 69 235-336 20-88 (122)
289 3apq_A DNAJ homolog subfamily 99.4 5.7E-13 2E-17 121.2 7.6 89 216-339 94-183 (210)
290 2oe3_A Thioredoxin-3; electron 99.4 1.5E-12 5.1E-17 106.5 9.3 70 235-339 29-98 (114)
291 2e0q_A Thioredoxin; electron t 99.4 3E-12 1E-16 101.8 10.8 70 235-339 15-84 (104)
292 3f8u_A Protein disulfide-isome 99.4 1.1E-11 3.7E-16 127.0 17.7 67 71-168 21-87 (481)
293 2vim_A Thioredoxin, TRX; thior 99.4 1.6E-12 5.5E-17 103.7 9.0 71 234-339 17-87 (104)
294 1syr_A Thioredoxin; SGPP, stru 99.4 1.7E-12 5.9E-17 105.5 8.9 70 235-339 25-94 (112)
295 1ti3_A Thioredoxin H, PTTRXH1; 99.4 2.1E-12 7.1E-17 104.8 9.4 71 234-339 24-94 (113)
296 1v98_A Thioredoxin; oxidoreduc 99.4 4.9E-12 1.7E-16 107.1 11.8 83 222-339 37-119 (140)
297 2i1u_A Thioredoxin, TRX, MPT46 99.4 1.4E-12 4.8E-17 107.2 8.1 71 235-339 29-99 (121)
298 3uvt_A Thioredoxin domain-cont 99.4 2.3E-12 7.8E-17 104.1 9.3 73 236-339 21-93 (111)
299 1sji_A Calsequestrin 2, calseq 99.4 7.9E-12 2.7E-16 122.8 14.7 164 70-332 27-198 (350)
300 3ed3_A Protein disulfide-isome 99.3 3.8E-12 1.3E-16 122.2 11.9 67 70-161 34-100 (298)
301 2vm1_A Thioredoxin, thioredoxi 99.3 2.9E-12 9.8E-17 104.8 9.5 70 235-339 27-96 (118)
302 1z6n_A Hypothetical protein PA 99.3 7.2E-13 2.5E-17 116.1 5.6 77 65-172 48-127 (167)
303 3fk8_A Disulphide isomerase; A 99.3 1.2E-12 4.3E-17 109.7 6.9 78 69-173 27-109 (133)
304 2av4_A Thioredoxin-like protei 99.3 1.1E-12 3.6E-17 111.9 6.4 69 70-169 40-108 (160)
305 3qou_A Protein YBBN; thioredox 99.3 2E-12 6.9E-17 123.2 8.9 72 234-339 24-95 (287)
306 2ju5_A Thioredoxin disulfide i 99.3 2.6E-13 8.9E-18 117.3 2.4 93 60-171 36-132 (154)
307 2djj_A PDI, protein disulfide- 99.3 2E-12 6.8E-17 106.4 7.7 83 222-336 11-94 (121)
308 3dxb_A Thioredoxin N-terminall 99.3 3.5E-12 1.2E-16 117.1 9.6 104 222-374 16-120 (222)
309 2l6c_A Thioredoxin; oxidoreduc 99.3 3.2E-12 1.1E-16 103.7 7.9 70 235-339 18-87 (110)
310 3evi_A Phosducin-like protein 99.3 2.7E-12 9.2E-17 105.7 7.3 67 236-340 23-89 (118)
311 1oaz_A Thioredoxin 1; immune s 99.3 1.2E-12 4.2E-17 108.6 5.2 71 235-339 20-104 (123)
312 2dj3_A Protein disulfide-isome 99.3 1.5E-12 5.3E-17 109.0 5.2 83 58-168 11-94 (133)
313 1zma_A Bacterocin transport ac 99.3 5.7E-12 1.9E-16 103.4 8.5 75 235-339 28-102 (118)
314 1qgv_A Spliceosomal protein U5 99.3 5.3E-12 1.8E-16 107.5 8.6 71 70-171 22-92 (142)
315 3ira_A Conserved protein; meth 99.3 7.7E-12 2.6E-16 109.8 9.8 87 228-339 31-120 (173)
316 2dj0_A Thioredoxin-related tra 99.3 1.9E-12 6.4E-17 109.4 5.6 75 232-339 22-102 (137)
317 3us3_A Calsequestrin-1; calciu 99.3 4E-11 1.4E-15 118.5 15.7 165 70-332 29-200 (367)
318 2voc_A Thioredoxin; electron t 99.3 4.7E-12 1.6E-16 102.9 7.5 72 70-172 16-87 (112)
319 3p2a_A Thioredoxin 2, putative 99.3 1.7E-12 5.8E-17 111.1 5.1 85 56-171 40-124 (148)
320 3qfa_C Thioredoxin; protein-pr 99.3 2.6E-12 8.9E-17 105.3 5.7 74 67-172 27-100 (116)
321 3h79_A Thioredoxin-like protei 99.3 6.7E-12 2.3E-16 104.4 8.3 80 58-161 19-101 (127)
322 3q6o_A Sulfhydryl oxidase 1; p 99.3 1.8E-11 6E-16 114.0 11.8 70 235-332 29-98 (244)
323 2dj1_A Protein disulfide-isome 99.3 4E-12 1.4E-16 107.4 6.8 83 58-168 21-103 (140)
324 3f3q_A Thioredoxin-1; His TAG, 99.3 2.3E-12 7.9E-17 104.3 4.8 71 70-172 23-93 (109)
325 2r2j_A Thioredoxin domain-cont 99.3 3.6E-11 1.2E-15 119.5 14.0 85 58-170 9-96 (382)
326 4euy_A Uncharacterized protein 99.3 4.7E-12 1.6E-16 101.6 6.2 70 70-171 17-86 (105)
327 3gix_A Thioredoxin-like protei 99.3 4.1E-12 1.4E-16 109.2 6.0 69 70-169 22-90 (149)
328 1fo5_A Thioredoxin; disulfide 99.3 7E-12 2.4E-16 96.1 6.7 64 237-336 3-66 (85)
329 3emx_A Thioredoxin; structural 99.3 2.8E-12 9.5E-17 108.2 4.7 75 238-339 33-107 (135)
330 2l5l_A Thioredoxin; structural 99.3 1.1E-11 3.8E-16 104.5 8.4 70 70-169 37-106 (136)
331 3d6i_A Monothiol glutaredoxin- 99.3 7.9E-12 2.7E-16 101.3 7.1 73 70-172 20-92 (112)
332 1mek_A Protein disulfide isome 99.3 3E-12 1E-16 104.7 4.6 72 235-337 23-94 (120)
333 2dbc_A PDCL2, unnamed protein 99.3 1.6E-11 5.3E-16 103.6 9.1 67 235-339 29-95 (135)
334 1nho_A Probable thioredoxin; b 99.3 7.1E-12 2.4E-16 96.1 6.4 63 238-336 3-65 (85)
335 3f9u_A Putative exported cytoc 99.2 1.8E-12 6E-17 114.0 3.1 104 64-173 40-148 (172)
336 3tco_A Thioredoxin (TRXA-1); d 99.2 4.3E-12 1.5E-16 102.0 5.0 84 58-172 8-91 (109)
337 1nsw_A Thioredoxin, TRX; therm 99.2 9.7E-12 3.3E-16 99.4 7.0 71 70-171 16-86 (105)
338 3die_A Thioredoxin, TRX; elect 99.2 1.3E-11 4.4E-16 98.7 7.8 71 70-171 18-88 (106)
339 2qsi_A Putative hydrogenase ex 99.2 2.9E-12 9.8E-17 107.4 3.7 71 72-173 34-106 (137)
340 2dml_A Protein disulfide-isome 99.2 1.9E-11 6.4E-16 101.9 8.6 70 70-169 34-103 (130)
341 2kuc_A Putative disulphide-iso 99.2 4.6E-12 1.6E-16 105.6 4.7 81 64-172 20-103 (130)
342 1wou_A Thioredoxin -related pr 99.2 1E-11 3.4E-16 103.0 6.6 78 235-338 23-107 (123)
343 2pu9_C TRX-F, thioredoxin F-ty 99.2 1.4E-11 4.8E-16 99.7 7.2 75 67-172 20-94 (111)
344 1t00_A Thioredoxin, TRX; redox 99.2 1.5E-11 5.1E-16 99.6 7.3 71 70-171 22-92 (112)
345 2trx_A Thioredoxin; electron t 99.2 1.4E-11 4.9E-16 98.9 7.0 71 70-171 19-89 (108)
346 1xfl_A Thioredoxin H1; AT3G510 99.2 1.9E-11 6.3E-16 101.5 7.5 71 70-172 37-107 (124)
347 1dby_A Chloroplast thioredoxin 99.2 2.2E-11 7.4E-16 97.7 7.7 71 70-171 18-88 (107)
348 1gh2_A Thioredoxin-like protei 99.2 1.8E-11 6E-16 98.5 7.0 70 70-171 20-89 (107)
349 1w4v_A Thioredoxin, mitochondr 99.2 1.9E-11 6.3E-16 100.6 7.2 71 70-171 30-100 (119)
350 2o8v_B Thioredoxin 1; disulfid 99.2 1.2E-11 4.2E-16 103.3 6.1 71 70-171 39-109 (128)
351 2dj0_A Thioredoxin-related tra 99.2 2.4E-11 8.2E-16 102.5 7.7 75 68-172 23-103 (137)
352 3gnj_A Thioredoxin domain prot 99.2 2.2E-11 7.5E-16 98.3 7.2 71 70-171 21-91 (111)
353 2i4a_A Thioredoxin; acidophIle 99.2 3.1E-11 1.1E-15 96.6 7.8 71 70-171 19-89 (107)
354 3hz4_A Thioredoxin; NYSGXRC, P 99.2 3.5E-11 1.2E-15 101.9 8.5 71 70-171 23-93 (140)
355 2lst_A Thioredoxin; structural 98.8 1.5E-12 5.2E-17 108.6 0.0 81 61-168 9-92 (130)
356 1thx_A Thioredoxin, thioredoxi 99.2 3E-11 1E-15 98.1 7.7 83 58-171 11-94 (115)
357 3m9j_A Thioredoxin; oxidoreduc 99.2 2.1E-11 7.1E-16 97.4 6.6 73 67-171 16-88 (105)
358 2yj7_A LPBCA thioredoxin; oxid 98.8 1.7E-12 5.7E-17 103.7 0.0 71 235-339 18-88 (106)
359 2xhf_A Peroxiredoxin 5; oxidor 99.2 1.3E-11 4.5E-16 108.1 5.7 119 38-173 15-150 (171)
360 3t58_A Sulfhydryl oxidase 1; o 99.2 7.7E-11 2.6E-15 121.3 12.3 89 222-339 16-108 (519)
361 3qou_A Protein YBBN; thioredox 99.2 2.6E-11 8.8E-16 115.5 8.1 71 70-171 25-95 (287)
362 3cxg_A Putative thioredoxin; m 99.2 9.7E-12 3.3E-16 104.6 4.5 75 65-171 34-111 (133)
363 2oe3_A Thioredoxin-3; electron 99.2 3.4E-11 1.2E-15 98.3 7.4 70 70-171 29-98 (114)
364 1wmj_A Thioredoxin H-type; str 99.2 2.5E-12 8.6E-17 107.1 0.6 71 234-339 34-104 (130)
365 3dml_A Putative uncharacterize 99.2 5E-12 1.7E-16 103.0 2.3 75 235-339 17-91 (116)
366 2ppt_A Thioredoxin-2; thiredox 99.2 3E-11 1E-15 104.4 7.2 71 70-171 63-133 (155)
367 3uvt_A Thioredoxin domain-cont 99.2 2.6E-11 9.1E-16 97.7 6.5 73 71-171 21-93 (111)
368 3aps_A DNAJ homolog subfamily 99.2 3.3E-11 1.1E-15 99.2 7.2 69 70-168 20-88 (122)
369 2es7_A Q8ZP25_salty, putative 99.2 1.5E-11 5.3E-16 104.6 5.1 90 236-374 34-127 (142)
370 1x5d_A Protein disulfide-isome 99.2 4.3E-11 1.5E-15 99.9 7.8 72 70-169 24-96 (133)
371 1ep7_A Thioredoxin CH1, H-type 99.2 3.2E-11 1.1E-15 97.5 6.8 70 71-171 24-93 (112)
372 3d22_A TRXH4, thioredoxin H-ty 99.2 2.8E-11 9.5E-16 102.2 6.6 72 69-172 44-115 (139)
373 3iv4_A Putative oxidoreductase 99.2 5.9E-11 2E-15 95.5 8.0 73 236-340 24-97 (112)
374 2f51_A Thioredoxin; electron t 99.2 2.6E-11 8.9E-16 99.6 6.1 87 58-172 7-96 (118)
375 1x5e_A Thioredoxin domain cont 99.2 5.2E-11 1.8E-15 98.7 8.0 67 72-168 23-89 (126)
376 1r26_A Thioredoxin; redox-acti 99.2 3.9E-11 1.3E-15 99.8 7.0 70 70-171 36-105 (125)
377 1xwb_A Thioredoxin; dimerizati 99.2 7.2E-11 2.5E-15 94.3 8.1 73 68-171 17-89 (106)
378 2xc2_A Thioredoxinn; oxidoredu 99.2 2.5E-11 8.4E-16 99.3 5.3 73 67-172 29-101 (117)
379 3ira_A Conserved protein; meth 99.2 1.3E-11 4.4E-16 108.4 3.7 91 59-171 27-120 (173)
380 2vlu_A Thioredoxin, thioredoxi 99.2 4.9E-11 1.7E-15 98.1 7.0 70 70-171 33-102 (122)
381 1xiy_A Peroxiredoxin, pfaop; a 99.2 1.6E-11 5.5E-16 108.8 4.3 119 38-173 2-152 (182)
382 2yzu_A Thioredoxin; redox prot 99.2 6.7E-11 2.3E-15 94.8 7.6 71 70-171 17-87 (109)
383 2l6c_A Thioredoxin; oxidoreduc 99.1 4.1E-11 1.4E-15 97.1 6.3 71 70-172 18-88 (110)
384 1sen_A Thioredoxin-like protei 99.1 3.3E-12 1.1E-16 111.6 -0.2 82 62-172 37-120 (164)
385 1fb6_A Thioredoxin M; electron 99.1 6.3E-11 2.1E-15 94.4 7.3 83 58-171 4-87 (105)
386 2wz9_A Glutaredoxin-3; protein 99.1 5E-11 1.7E-15 102.7 7.0 70 70-171 31-100 (153)
387 1zma_A Bacterocin transport ac 99.1 5.6E-11 1.9E-15 97.4 7.0 75 70-171 28-102 (118)
388 1mek_A Protein disulfide isome 99.1 1.1E-11 3.7E-16 101.3 2.5 72 70-169 23-94 (120)
389 3apq_A DNAJ homolog subfamily 99.1 1.5E-11 5.2E-16 111.7 3.7 72 69-171 112-183 (210)
390 3ed3_A Protein disulfide-isome 99.1 7.7E-11 2.6E-15 113.0 8.8 69 235-335 34-102 (298)
391 2vim_A Thioredoxin, TRX; thior 99.1 6.1E-11 2.1E-15 94.3 6.6 73 68-172 16-88 (104)
392 1a8l_A Protein disulfide oxido 99.1 4.4E-11 1.5E-15 109.6 6.6 69 234-335 20-89 (226)
393 1faa_A Thioredoxin F; electron 99.1 6.4E-11 2.2E-15 97.8 6.9 74 68-172 34-107 (124)
394 2j23_A Thioredoxin; immune pro 99.1 3.2E-11 1.1E-15 99.5 5.0 72 70-171 32-103 (121)
395 1a0r_P Phosducin, MEKA, PP33; 99.1 3.7E-11 1.3E-15 111.5 5.9 70 235-340 132-201 (245)
396 3uem_A Protein disulfide-isome 99.1 4.2E-10 1.4E-14 110.7 13.8 67 237-334 136-204 (361)
397 1syr_A Thioredoxin; SGPP, stru 99.1 9.5E-11 3.3E-15 95.0 7.4 70 70-171 25-94 (112)
398 2qgv_A Hydrogenase-1 operon pr 99.1 2E-11 7E-16 102.6 3.2 74 70-173 33-108 (140)
399 2i1u_A Thioredoxin, TRX, MPT46 99.1 1E-10 3.4E-15 96.0 7.3 71 70-171 29-99 (121)
400 2e0q_A Thioredoxin; electron t 99.1 1E-10 3.5E-15 92.7 7.1 70 70-171 15-84 (104)
401 1ti3_A Thioredoxin H, PTTRXH1; 99.1 9.6E-11 3.3E-15 94.8 6.9 71 70-172 25-95 (113)
402 2r2j_A Thioredoxin domain-cont 99.1 1.8E-10 6E-15 114.5 10.3 88 222-338 9-96 (382)
403 1v98_A Thioredoxin; oxidoreduc 99.1 1.4E-10 4.8E-15 98.0 8.1 83 58-171 37-119 (140)
404 2ywm_A Glutaredoxin-like prote 99.1 1.1E-10 3.9E-15 107.2 7.6 69 235-335 20-92 (229)
405 3ph9_A Anterior gradient prote 99.1 4.7E-11 1.6E-15 102.6 4.4 97 69-199 42-140 (151)
406 2vm1_A Thioredoxin, thioredoxi 99.1 1.2E-10 4.2E-15 94.9 6.7 71 70-172 27-97 (118)
407 3ga4_A Dolichyl-diphosphooligo 99.1 3.4E-10 1.2E-14 99.4 9.9 71 235-334 36-113 (178)
408 2djj_A PDI, protein disulfide- 99.1 1.1E-10 3.9E-15 95.7 6.3 81 58-168 11-94 (121)
409 1oaz_A Thioredoxin 1; immune s 99.1 6.5E-11 2.2E-15 98.1 4.9 71 70-171 20-104 (123)
410 3dxb_A Thioredoxin N-terminall 99.1 8.5E-11 2.9E-15 107.8 5.9 72 70-172 29-100 (222)
411 2trc_P Phosducin, MEKA, PP33; 99.1 4.8E-11 1.6E-15 109.0 4.0 70 235-340 119-188 (217)
412 3kp8_A Vkorc1/thioredoxin doma 99.1 8.2E-12 2.8E-16 100.8 -1.2 73 228-336 4-76 (106)
413 1ilo_A Conserved hypothetical 99.1 4.6E-10 1.6E-14 84.3 8.6 62 239-339 2-63 (77)
414 2dbc_A PDCL2, unnamed protein 99.0 2.5E-10 8.5E-15 96.1 6.5 69 70-173 29-97 (135)
415 1wou_A Thioredoxin -related pr 99.0 1.9E-10 6.3E-15 95.2 5.4 77 70-169 23-106 (123)
416 3emx_A Thioredoxin; structural 99.0 5.8E-11 2E-15 100.0 2.2 76 73-172 33-108 (135)
417 3iv4_A Putative oxidoreductase 99.0 5.2E-10 1.8E-14 90.0 7.1 74 71-173 24-98 (112)
418 3evi_A Phosducin-like protein 99.0 2.5E-10 8.4E-15 93.9 5.3 68 71-173 23-90 (118)
419 3qcp_A QSOX from trypanosoma b 99.0 2.1E-10 7.1E-15 115.5 5.8 76 235-335 41-116 (470)
420 2b5e_A Protein disulfide-isome 99.0 8.4E-10 2.9E-14 113.6 10.3 68 235-335 30-97 (504)
421 1sji_A Calsequestrin 2, calseq 99.0 1.1E-09 3.7E-14 107.4 9.6 70 235-338 27-103 (350)
422 2yj7_A LPBCA thioredoxin; oxid 98.5 5.9E-11 2E-15 94.5 0.0 71 70-171 18-88 (106)
423 1fo5_A Thioredoxin; disulfide 99.0 5.6E-10 1.9E-14 85.3 5.4 60 72-158 3-62 (85)
424 3ga4_A Dolichyl-diphosphooligo 99.0 1.9E-09 6.4E-14 94.7 9.3 68 70-161 36-112 (178)
425 1nho_A Probable thioredoxin; b 98.9 5.8E-10 2E-14 85.2 4.8 59 73-158 3-61 (85)
426 1wmj_A Thioredoxin H-type; str 98.9 1.3E-10 4.5E-15 96.5 1.0 71 70-172 35-105 (130)
427 3kp8_A Vkorc1/thioredoxin doma 98.9 1.2E-11 4.2E-16 99.8 -5.2 69 63-158 4-72 (106)
428 2dlx_A UBX domain-containing p 98.9 3.8E-09 1.3E-13 90.7 9.8 75 234-339 40-118 (153)
429 3us3_A Calsequestrin-1; calciu 98.9 5.8E-09 2E-13 102.9 11.3 72 235-339 29-106 (367)
430 2es7_A Q8ZP25_salty, putative 98.9 7.5E-10 2.6E-14 94.1 4.1 70 71-172 34-107 (142)
431 3qcp_A QSOX from trypanosoma b 98.9 1.3E-09 4.4E-14 109.7 6.3 68 70-161 41-113 (470)
432 3dml_A Putative uncharacterize 98.9 1.9E-10 6.6E-15 93.6 0.3 77 69-172 16-92 (116)
433 1a0r_P Phosducin, MEKA, PP33; 98.9 1.8E-09 6E-14 100.2 5.5 70 70-172 132-201 (245)
434 2trc_P Phosducin, MEKA, PP33; 98.8 1.5E-09 5E-14 99.1 4.1 69 70-171 119-187 (217)
435 2hls_A Protein disulfide oxido 98.8 7.8E-09 2.7E-13 96.0 8.9 67 68-158 135-202 (243)
436 1ilo_A Conserved hypothetical 98.8 1.1E-08 3.8E-13 76.5 7.0 55 74-158 2-56 (77)
437 3gyk_A 27KDA outer membrane pr 98.7 7.9E-08 2.7E-12 84.1 12.2 39 228-266 14-52 (175)
438 2fgx_A Putative thioredoxin; N 98.7 1.7E-08 6E-13 80.9 7.1 65 238-339 30-94 (107)
439 1eej_A Thiol:disulfide interch 98.7 1.1E-07 3.8E-12 86.5 12.7 93 229-337 79-193 (216)
440 2dlx_A UBX domain-containing p 98.7 3.4E-08 1.2E-12 84.8 8.6 74 70-171 41-118 (153)
441 2djk_A PDI, protein disulfide- 98.7 2.1E-08 7.3E-13 83.9 7.0 67 236-336 23-92 (133)
442 2c0g_A ERP29 homolog, windbeut 98.7 1.2E-07 4.2E-12 87.8 11.4 70 235-335 32-105 (248)
443 2k8s_A Thioredoxin; dimer, str 98.7 1.7E-08 5.8E-13 76.5 4.4 65 240-339 4-68 (80)
444 1ttz_A Conserved hypothetical 98.6 2.8E-08 9.5E-13 76.8 5.5 58 240-338 3-60 (87)
445 3hd5_A Thiol:disulfide interch 98.6 1.1E-07 3.7E-12 84.9 9.0 43 235-287 24-66 (195)
446 2znm_A Thiol:disulfide interch 98.6 2.1E-07 7.2E-12 82.9 10.2 43 235-287 21-63 (195)
447 3h93_A Thiol:disulfide interch 98.5 1.8E-07 6.1E-12 83.3 8.8 43 235-287 24-66 (192)
448 2e7p_A Glutaredoxin; thioredox 98.5 7.5E-08 2.6E-12 78.2 4.7 68 236-339 19-86 (116)
449 1ego_A Glutaredoxin; electron 98.5 3E-07 1E-11 70.0 7.3 66 240-338 3-70 (85)
450 2qc7_A ERP31, ERP28, endoplasm 98.5 6.8E-07 2.3E-11 82.5 10.5 70 235-335 21-94 (240)
451 2fgx_A Putative thioredoxin; N 98.4 1.8E-07 6.2E-12 74.9 5.3 63 73-169 30-92 (107)
452 1eej_A Thiol:disulfide interch 98.4 6.2E-07 2.1E-11 81.5 8.7 88 64-158 79-187 (216)
453 1wjk_A C330018D20RIK protein; 98.4 6.8E-07 2.3E-11 70.8 7.4 63 236-337 15-77 (100)
454 2rem_A Disulfide oxidoreductas 98.4 2E-06 6.8E-11 76.3 10.6 42 235-286 24-65 (193)
455 4f9z_D Endoplasmic reticulum r 98.4 5.7E-06 1.9E-10 75.6 13.8 171 70-335 26-201 (227)
456 2djk_A PDI, protein disulfide- 98.3 3.8E-07 1.3E-11 76.2 5.2 63 70-160 22-86 (133)
457 1ttz_A Conserved hypothetical 98.3 2.1E-07 7.2E-12 71.8 3.4 57 75-169 3-59 (87)
458 2k8s_A Thioredoxin; dimer, str 98.3 3.8E-07 1.3E-11 68.9 4.7 58 75-158 4-61 (80)
459 2e7p_A Glutaredoxin; thioredox 98.3 2.4E-07 8.2E-12 75.1 3.7 68 70-170 18-85 (116)
460 3hd5_A Thiol:disulfide interch 98.3 1.7E-06 5.9E-11 77.0 9.5 43 70-115 24-66 (195)
461 3gyk_A 27KDA outer membrane pr 98.3 1.2E-06 4.1E-11 76.5 7.9 50 61-114 12-61 (175)
462 1v58_A Thiol:disulfide interch 98.3 3.1E-06 1.1E-10 78.2 11.1 96 229-336 90-212 (241)
463 1t3b_A Thiol:disulfide interch 98.3 1.9E-06 6.3E-11 78.1 8.9 85 235-335 85-191 (211)
464 1hyu_A AHPF, alkyl hydroperoxi 98.3 1.7E-06 5.7E-11 89.3 9.7 69 234-339 115-183 (521)
465 2c0g_A ERP29 homolog, windbeut 98.2 2.9E-06 9.9E-11 78.5 9.1 65 70-160 32-103 (248)
466 3hz8_A Thiol:disulfide interch 98.2 5.3E-06 1.8E-10 73.9 9.7 43 235-287 23-65 (193)
467 1z6m_A Conserved hypothetical 98.2 1.1E-05 3.8E-10 70.3 11.5 52 228-287 19-70 (175)
468 3kp9_A Vkorc1/thioredoxin doma 98.2 3.3E-07 1.1E-11 86.7 1.5 73 228-336 189-261 (291)
469 2qc7_A ERP31, ERP28, endoplasm 98.2 3.3E-06 1.1E-10 77.8 8.1 64 70-160 21-91 (240)
470 1un2_A DSBA, thiol-disulfide i 98.1 4.6E-06 1.6E-10 74.6 6.8 44 235-288 112-158 (197)
471 1ego_A Glutaredoxin; electron 98.1 2.8E-06 9.7E-11 64.5 4.6 59 75-157 3-63 (85)
472 1t3b_A Thiol:disulfide interch 98.1 9.2E-06 3.1E-10 73.4 8.7 83 70-158 85-187 (211)
473 1wjk_A C330018D20RIK protein; 98.0 2.1E-06 7.3E-11 67.9 3.1 57 71-157 15-71 (100)
474 2znm_A Thiol:disulfide interch 98.0 1.1E-05 3.8E-10 71.5 7.9 42 70-114 21-62 (195)
475 3h93_A Thiol:disulfide interch 97.9 1.5E-05 5.2E-10 70.6 7.3 42 70-114 24-65 (192)
476 1v58_A Thiol:disulfide interch 97.9 3.9E-05 1.3E-09 70.8 10.3 97 64-168 90-212 (241)
477 1hyu_A AHPF, alkyl hydroperoxi 97.9 1.5E-05 5E-10 82.2 7.7 62 69-158 115-176 (521)
478 3kp9_A Vkorc1/thioredoxin doma 97.8 2.9E-06 9.9E-11 80.2 0.8 67 64-158 190-257 (291)
479 1h75_A Glutaredoxin-like prote 97.8 4.9E-05 1.7E-09 56.9 7.4 59 240-337 3-61 (81)
480 1r7h_A NRDH-redoxin; thioredox 97.8 5.7E-05 2E-09 55.5 7.6 59 240-337 3-61 (75)
481 3gv1_A Disulfide interchange p 97.8 0.00014 4.7E-09 61.6 9.9 92 229-337 7-121 (147)
482 1kte_A Thioltransferase; redox 97.7 3.5E-05 1.2E-09 61.0 5.0 65 240-338 14-80 (105)
483 1z6m_A Conserved hypothetical 97.7 0.00027 9.1E-09 61.4 10.9 51 64-115 20-70 (175)
484 4dvc_A Thiol:disulfide interch 97.7 0.00019 6.6E-09 62.5 10.0 34 235-268 20-53 (184)
485 3feu_A Putative lipoprotein; a 97.7 0.00018 6.3E-09 63.3 9.7 30 236-265 22-51 (185)
486 3l9v_A Putative thiol-disulfid 97.6 7.1E-05 2.4E-09 66.2 6.6 43 235-287 13-58 (189)
487 2rem_A Disulfide oxidoreductas 97.6 9.9E-05 3.4E-09 65.1 7.6 42 70-114 24-65 (193)
488 1h75_A Glutaredoxin-like prote 97.6 8E-05 2.7E-09 55.7 5.9 53 75-157 3-55 (81)
489 2hze_A Glutaredoxin-1; thiored 97.6 3.6E-05 1.2E-09 62.2 3.6 65 239-338 20-87 (114)
490 1kte_A Thioltransferase; redox 97.5 0.0001 3.4E-09 58.3 5.6 61 75-158 14-74 (105)
491 2cq9_A GLRX2 protein, glutared 97.5 0.00024 8.3E-09 58.7 7.2 61 241-338 30-92 (130)
492 2ec4_A FAS-associated factor 1 97.5 0.0019 6.5E-08 56.4 13.2 130 209-370 25-170 (178)
493 2hze_A Glutaredoxin-1; thiored 97.5 6.6E-05 2.3E-09 60.6 3.5 60 73-158 19-81 (114)
494 4h86_A Peroxiredoxin type-2; o 97.5 0.00046 1.6E-08 60.8 9.1 102 228-340 59-178 (199)
495 2lqo_A Putative glutaredoxin R 97.4 0.00088 3E-08 51.8 9.1 62 240-338 6-68 (92)
496 2cq9_A GLRX2 protein, glutared 97.4 0.00019 6.6E-09 59.3 5.4 56 77-158 31-86 (130)
497 2ht9_A Glutaredoxin-2; thiored 97.4 0.00041 1.4E-08 58.7 7.4 61 241-338 52-114 (146)
498 3gv1_A Disulfide interchange p 97.3 0.00064 2.2E-08 57.5 8.4 87 64-158 7-115 (147)
499 1r7h_A NRDH-redoxin; thioredox 97.3 0.00028 9.6E-09 51.6 5.4 53 75-157 3-55 (75)
500 3nzn_A Glutaredoxin; structura 97.3 0.0012 4E-08 52.1 9.2 23 239-261 23-45 (103)
No 1
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.94 E-value=7.6e-26 Score=210.84 Aligned_cols=201 Identities=19% Similarity=0.293 Sum_probs=143.1
Q ss_pred CCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCC
Q 013684 58 KEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSD 137 (438)
Q Consensus 58 ~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d 137 (438)
.++++.+.....+|++++|+|||+||++|+.+.|.|.++++++++.+.++.++.|+.|..
T Consensus 19 ~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~-------------------- 78 (241)
T 3idv_A 19 VLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSA-------------------- 78 (241)
T ss_dssp EECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTC--------------------
T ss_pred EecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCC--------------------
Confidence 444554444444789999999999999999999999999999988765577777776644
Q ss_pred hHHHHHHhhhcCcCccceEEEecCCCCCCCcccccchhHHhhhCCCCccCChhHHHHHHHHHHhhhhHHHHHhhhhcCCC
Q 013684 138 LETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDR 217 (438)
Q Consensus 138 ~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~~~~i~~~~~~a~p~~~e~l~~L~~~~~~~~~~~~~~~~~g~~~~ 217 (438)
..+++.|+|.++|++++++ +|..+... |. ...+.+......... ......+
T Consensus 79 ----~~l~~~~~v~~~Pt~~~~~----~g~~~~~~--------g~----~~~~~l~~~i~~~~~---------~~~~~~~ 129 (241)
T 3idv_A 79 ----SVLASRFDVSGYPTIKILK----KGQAVDYE--------GS----RTQEEIVAKVREVSQ---------PDWTPPP 129 (241)
T ss_dssp ----HHHHHHTTCCSSSEEEEEE----TTEEEECC--------SC----SCHHHHHHHHHHHHS---------TTCCCCC
T ss_pred ----HHHHHhcCCCcCCEEEEEc----CCCccccc--------Cc----ccHHHHHHHHhhccC---------ccccccc
Confidence 6789999999999999997 56554221 11 122222222111110 0011122
Q ss_pred CCccCCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHH
Q 013684 218 GYLLGHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYF 297 (438)
Q Consensus 218 ~f~l~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~ 297 (438)
......++. .+...-..+++++|+||++||++|+.+.|.+.++++++.++ ..++.++.|+++.+
T Consensus 130 ~~~~~~~~~-~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~-------~~~v~~~~vd~~~~-------- 193 (241)
T 3idv_A 130 EVTLVLTKE-NFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKR-------SPPIPLAKVDATAE-------- 193 (241)
T ss_dssp CSSEECCTT-THHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTS-------SSCCCEEEEETTTC--------
T ss_pred ccceeccHH-HHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhcc-------CCcEEEEEEECCCC--------
Confidence 222244454 44332235789999999999999999999999999999865 34688888888765
Q ss_pred hcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 298 GTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 298 ~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.++++.|+|.++||++++ ++|+.+..
T Consensus 194 ---------------~~l~~~~~v~~~Pt~~~~-~~g~~~~~ 219 (241)
T 3idv_A 194 ---------------TDLAKRFDVSGYPTLKIF-RKGRPYDY 219 (241)
T ss_dssp ---------------HHHHHHTTCCSSSEEEEE-ETTEEEEC
T ss_pred ---------------HHHHHHcCCcccCEEEEE-ECCeEEEe
Confidence 678999999999999999 46877654
No 2
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.89 E-value=6.4e-23 Score=175.01 Aligned_cols=118 Identities=14% Similarity=0.267 Sum_probs=110.0
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHH---HHHHHHhhhhhcCCCCCCEEEEEEec
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLS---IYQKIKQNLVEKGDALEDFEVVFVST 286 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~---l~~~~~~~~~~~~~~~~~~~vv~is~ 286 (438)
.+|..+|+|++ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+ ++++++++ +++|++|++
T Consensus 2 ~~G~~~p~f~l~~~~g~-~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~---------~~~~v~v~~ 71 (142)
T 3ewl_A 2 NAGMKAADFTYVTVHGD-NSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENG---------TLRVLAIYP 71 (142)
T ss_dssp CTTSBCCCCEEECTTCC-EEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHT---------SEEEEEEEC
T ss_pred CCCCcCCCCEEECCCCC-EEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccC---------CeEEEEEEe
Confidence 36899999999 99999 999999999999999999999999999999998 99999876 799999999
Q ss_pred CCCHHHHHHHHhcCCCcccccCCchhHHHHH--hcCcCceeeEEEECCCCcEEEc
Q 013684 287 DRDQTSFESYFGTMPWLALPFGDPTIKELTK--YFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 287 d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~--~~~v~~~P~~~lid~~G~i~~~ 339 (438)
|.+.+.+++++++++ +.+|+..|....+.. .|+|.++|+++|||++|+++++
T Consensus 72 d~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 125 (142)
T 3ewl_A 72 DENREEWATKAVYMP-QGWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRKRVILK 125 (142)
T ss_dssp SSCHHHHHHHHTTSC-TTCEEEECTTCHHHHTTCSCCCSSSEEEEECTTCBEEEC
T ss_pred cCCHHHHHHHHHHcC-CCcceeeCCccchhhHHHcCCCCCCeEEEECCCCCEEec
Confidence 999999999999988 688988888888876 9999999999999999999985
No 3
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.89 E-value=6.6e-23 Score=175.24 Aligned_cols=120 Identities=13% Similarity=0.199 Sum_probs=109.3
Q ss_pred hhhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHH---HHHHHHhhhhhcCCCCCCEEEEEEe
Q 013684 210 NLLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLS---IYQKIKQNLVEKGDALEDFEVVFVS 285 (438)
Q Consensus 210 ~~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~---l~~~~~~~~~~~~~~~~~~~vv~is 285 (438)
..+|..+|+|++ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+ +++++++. +++||+|+
T Consensus 5 ~~~G~~ap~f~l~~~~g~-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~---------~~~vi~i~ 74 (142)
T 3eur_A 5 NRLGTKALNFTYTLDSGV-KGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAK---------KLKVLSIY 74 (142)
T ss_dssp TCTTSBCCCCEEEETTSC-EEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTT---------SEEEEEEE
T ss_pred hcCCCccCCcEEEcCCCC-EeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccC---------CeEEEEEE
Confidence 467999999999 99999 999999999999999999999999999999999 99999865 89999999
Q ss_pred cCCCHHHHHHHHhcCCCcccccCCchhH--HHHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 286 TDRDQTSFESYFGTMPWLALPFGDPTIK--ELTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 286 ~d~~~~~~~~~~~~~~~~~~p~~~d~~~--~l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
.|.+.+.+++++++++ +.++...|... .+.+.|+|.++|+++|||++|+|+++.
T Consensus 75 ~d~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (142)
T 3eur_A 75 PDEELDEWKKHRNDFA-KEWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLLKD 130 (142)
T ss_dssp CSSCHHHHHHHGGGSC-TTSEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEEEE
T ss_pred cCCCHHHHHHHHHhcc-cccccccCccchhhhhhhcCCCcCCeEEEECCCCcEEecC
Confidence 9999999999999988 56676666544 378999999999999999999999884
No 4
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.89 E-value=7.3e-23 Score=175.30 Aligned_cols=127 Identities=37% Similarity=0.681 Sum_probs=115.4
Q ss_pred hhcCCCC-Ccc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 212 LTNHDRG-YLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 212 ~g~~~~~-f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
++..+|+ |++ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.+++++++++ .+++|++|++|.+
T Consensus 3 ~~~~~P~~f~l~~~~g~-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--------~~~~vv~v~~d~~ 73 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAA-DIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEK--------KNFEVMLISWDES 73 (144)
T ss_dssp TTTSCSSCSEEEETTEE-EEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--------TTEEEEEEECCSS
T ss_pred hhhhCCCceEEEcCCCC-EecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC--------CCEEEEEEeCCCC
Confidence 4678899 999 99999 99999999999999999999999999999999999999852 2799999999999
Q ss_pred HHHHHHHHhcCCCcccccCC-chhHHHHHhcCcCceeeEEEEC-CCCcEEEcccchhhhh
Q 013684 290 QTSFESYFGTMPWLALPFGD-PTIKELTKYFDVQGIPCLVIIG-PEGKTVTKQGRNLINL 347 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~p~~~-d~~~~l~~~~~v~~~P~~~lid-~~G~i~~~~~~~~~~~ 347 (438)
.+.+++++++++|..+|+.. +....+++.|+|.++|+++||| ++|+++.+.+.+.+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~~~~~~~~~ 133 (144)
T 1i5g_A 74 AEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVKSIPTLVGVEADSGNIITTQARTMVVK 133 (144)
T ss_dssp HHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHHHH
T ss_pred HHHHHHHHHhCCccccccCchHHHHHHHHHcCCCCCCEEEEEECCCCcEEeccchhhhhh
Confidence 99999999999999999887 6678999999999999999999 9999999987665533
No 5
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.89 E-value=1.3e-22 Score=175.39 Aligned_cols=119 Identities=24% Similarity=0.311 Sum_probs=110.1
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
.+|..+|+|++ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.+++++|+++ +++|++|++|.+
T Consensus 4 ~~g~~~p~f~l~~~~G~-~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~v~~d~~ 73 (152)
T 2lrn_A 4 ATGSVAPAITGIDLKGN-SVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK---------GFTIYGVSTDRR 73 (152)
T ss_dssp CTTEECCCCEEECSSSC-EEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT---------TEEEEEEECCSC
T ss_pred cCCCcCCCceeEcCCCC-EEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC---------CeEEEEEEccCC
Confidence 36888999999 99999 99999999999999999999999999999999999999865 799999999998
Q ss_pred HHHHHHHHhcCCCcccccCCch---hHHHHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 290 QTSFESYFGTMPWLALPFGDPT---IKELTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~p~~~d~---~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
.+.+++++++++ +.+|+..|. ...+.+.|+|.++|+++|||++|+++.+.
T Consensus 74 ~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 126 (152)
T 2lrn_A 74 EEDWKKAIEEDK-SYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPEGKIVAKE 126 (152)
T ss_dssp HHHHHHHHHHHT-CCSEEEEECHHHHHHHHHHTTCCSSCEEEEECTTSEEEEEC
T ss_pred HHHHHHHHHHhC-CCCeEEecccchhHHHHHHhCCCcCCeEEEECCCCeEEEee
Confidence 999999999877 678887776 78999999999999999999999999874
No 6
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.89 E-value=8.1e-23 Score=179.72 Aligned_cols=141 Identities=30% Similarity=0.567 Sum_probs=124.3
Q ss_pred HHHhhccchhH-HHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEec
Q 013684 36 RFLIMSLSQWY-VQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSS 114 (438)
Q Consensus 36 ~~~~g~~~p~f-~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~ 114 (438)
.+.+|.++|+| + +.+.+| .+++++++||++||+||++||++|+.++|.|.++++++++.. +++|++|++
T Consensus 21 ~~~vG~~~P~f~~--------l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~-~v~vv~v~~ 90 (165)
T 3s9f_A 21 MSGVAKHLGEALK--------LRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSK-NFEIILASW 90 (165)
T ss_dssp -CHHHHHHHHTSC--------EEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTT-TEEEEEEEC
T ss_pred hhhhcccCCccee--------eecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCC-CeEEEEEec
Confidence 34588999999 7 889999 999999999999999999999999999999999999998742 599999999
Q ss_pred CCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEecCCCCC-CCcccccchhHH-hhhCCCCccCCh
Q 013684 115 DEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDK-DDATLHDGVELI-YKYGIRAFPFTK 189 (438)
Q Consensus 115 D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~-G~v~~~~~~~~i-~~~~~~a~p~~~ 189 (438)
|.+.+.+++++++++|..+++...+....+++.|+|.++|+++|||+ + |+++.+.+...+ .+.....|||..
T Consensus 91 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~lid~---~~G~iv~~~~~~~~~~d~~~~~fpw~~ 164 (165)
T 3s9f_A 91 DEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVESIPTLIGLNA---DTGDTVTTRARHALTQDPMGEQFPWRD 164 (165)
T ss_dssp CCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEET---TTCCEEESCHHHHHHHCTTCTTTTCCC
T ss_pred CCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCCCCCEEEEEeC---CCCEEEecccHHHHhhCcccccCCCCC
Confidence 99999999999999999998876665589999999999999999999 8 999999886544 445555688764
No 7
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.88 E-value=2.5e-22 Score=173.26 Aligned_cols=139 Identities=23% Similarity=0.411 Sum_probs=120.1
Q ss_pred hhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCH
Q 013684 212 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ 290 (438)
Q Consensus 212 ~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~ 290 (438)
+|..+|+|++ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.+++++++++ ++.|++|++|.+.
T Consensus 2 ~G~~~p~~~l~~~~g~-~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~---------~v~vv~v~~d~~~ 71 (151)
T 2f9s_A 2 EGSDAPNFVLEDTNGK-RIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQ---------GVEIVAVNVGESK 71 (151)
T ss_dssp CCEECCCCEEECTTCC-EEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG---------TEEEEEEEESCCH
T ss_pred CCCcCCcceeEcCCCC-EEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC---------CeEEEEEECCCCH
Confidence 5788999999 99999 99999999999999999999999999999999999999865 7999999999888
Q ss_pred HHHHHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcccchhhhhccccCCCCCHHHHHHHHHHHHHH
Q 013684 291 TSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEE 370 (438)
Q Consensus 291 ~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~i~~~ 370 (438)
+.+++++++++ +.+|+..|....+.+.|+|.++|+++|+|++|+++.+. .|. .+ .++|.+.|+++
T Consensus 72 ~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~-------~G~----~~---~~~l~~~l~~l 136 (151)
T 2f9s_A 72 IAVHNFMKSYG-VNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVV-------TGT----MT---ESMIHDYMNLI 136 (151)
T ss_dssp HHHHHHHHHHT-CCSCEEEETTSHHHHHTTCCSSCEEEEECTTSEEEEEE-------ESC----CC---HHHHHHHHHHH
T ss_pred HHHHHHHHHcC-CCceEEECCchHHHHhcCCCCCCeEEEECCCCcEEEEE-------eCC----CC---HHHHHHHHHHH
Confidence 99999999888 67899888889999999999999999999999999873 232 12 35566667666
Q ss_pred hccCC
Q 013684 371 AKNLP 375 (438)
Q Consensus 371 ~~~~~ 375 (438)
+++..
T Consensus 137 l~~~~ 141 (151)
T 2f9s_A 137 KPGET 141 (151)
T ss_dssp SCC--
T ss_pred Hhhhh
Confidence 65443
No 8
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.88 E-value=7.2e-23 Score=175.19 Aligned_cols=119 Identities=16% Similarity=0.088 Sum_probs=101.8
Q ss_pred hhhcCCCCCccCCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCH
Q 013684 211 LLTNHDRGYLLGHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ 290 (438)
Q Consensus 211 ~~g~~~~~f~l~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~ 290 (438)
.+|..+|+|+++.+|+ .+++++++||+++|+||++||++|+.++|.|.+++++|+++ +++||+|++|.+.
T Consensus 8 ~~G~~~P~f~l~~~g~-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~---------~~~vv~vs~d~~~ 77 (143)
T 4fo5_A 8 NPGDLAPRIEFLGNDA-KASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD---------KIAMCSISMDEKE 77 (143)
T ss_dssp STTSBCCCCCC------CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT---------TEEEEEEECCSCH
T ss_pred CCcccCCceEEcCCCC-EEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC---------CEEEEEEEccCCH
Confidence 3688999999988999 99999999999999999999999999999999999999765 7999999999999
Q ss_pred HHHHHHHhcCCCccc-ccCCc---hhHHHHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 291 TSFESYFGTMPWLAL-PFGDP---TIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 291 ~~~~~~~~~~~~~~~-p~~~d---~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
+.+++++++++ +.+ +...| ....+.+.|+|.++|+++|||++|+++.+.
T Consensus 78 ~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (143)
T 4fo5_A 78 SIFTETVKIDK-LDLSTQFHEGLGKESELYKKYDLRKGFKNFLINDEGVIIAAN 130 (143)
T ss_dssp HHHHHHHHHHT-CCGGGEEECTTGGGSHHHHHTTGGGCCCEEEECTTSBEEEES
T ss_pred HHHHHHHHHhC-CCCceeeecccccchHHHHHcCCCCCCcEEEECCCCEEEEcc
Confidence 99999999876 455 44333 346899999999999999999999999884
No 9
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=5e-22 Score=171.39 Aligned_cols=119 Identities=19% Similarity=0.253 Sum_probs=109.8
Q ss_pred hhhcCCCCCcc-CCCCCceeecc--ccCCCEEEEEEecCCChh--hhhhhHHHHHHHHHH-HhhhhhcCCCCCCEEEEEE
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVS--SLVGKTVGLYFSARWCIP--CEKFMPKLLSIYQKI-KQNLVEKGDALEDFEVVFV 284 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~--~~~gk~vll~F~a~wC~~--C~~~~p~l~~l~~~~-~~~~~~~~~~~~~~~vv~i 284 (438)
.+|..+|+|++ +.+|+ .++++ +++||+++|+||++||++ |+.++|.|.+++++| +++ +++|++|
T Consensus 6 ~~G~~~p~f~l~~~~g~-~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~---------~~~~v~v 75 (150)
T 3fw2_A 6 EIGKYAPFFSLPNAKGE-KITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNK---------YIGMLGI 75 (150)
T ss_dssp STTSBCCCCCEEBTTCC-EECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCS---------SEEEEEE
T ss_pred cCCCcCCccEeECCCCC-EEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCC---------CeEEEEE
Confidence 36899999999 99999 99999 999999999999999999 999999999999999 644 7999999
Q ss_pred ecCCCHHHHHHHHhcCCCcccccCCch---hHHHHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 285 STDRDQTSFESYFGTMPWLALPFGDPT---IKELTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 285 s~d~~~~~~~~~~~~~~~~~~p~~~d~---~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
++|.+.+.+++++++++ +.+|+..|. ...+.+.|++.++|+++|||++|+++.+.
T Consensus 76 ~~d~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 133 (150)
T 3fw2_A 76 SLDVDKQQWKDAIKRDT-LDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAKN 133 (150)
T ss_dssp ECCSCHHHHHHHHHHTT-CCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred EcCCCHHHHHHHHHHhC-CCceEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEcc
Confidence 99999899999999888 677777765 67999999999999999999999999884
No 10
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.88 E-value=2.3e-22 Score=172.20 Aligned_cols=138 Identities=30% Similarity=0.598 Sum_probs=121.9
Q ss_pred hhccchh-HHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCC
Q 013684 39 IMSLSQW-YVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDED 117 (438)
Q Consensus 39 ~g~~~p~-f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~ 117 (438)
+|..+|+ |+ +.+.+|+.+++++++||+++|+||++||++|+.++|.|.++++++++. .++++++|++|.+
T Consensus 3 ~~~~~P~~f~--------l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~v~~d~~ 73 (144)
T 1i5g_A 3 LKKFFPYSTN--------VLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEK-KNFEVMLISWDES 73 (144)
T ss_dssp TTTSCSSCSE--------EEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCSS
T ss_pred hhhhCCCceE--------EEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCCC
Confidence 5778888 88 899999999999999999999999999999999999999999999863 2599999999999
Q ss_pred HHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEec-CCCCCCCcccccchhHHhhhCC-CCccCC
Q 013684 118 LNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQ-PYDDKDDATLHDGVELIYKYGI-RAFPFT 188 (438)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd-~~~~~G~v~~~~~~~~i~~~~~-~a~p~~ 188 (438)
.+.+++++++++|..+++...+....+++.|++.++|+++||| + +|+++.+.+...+..... ..|||.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~---~G~i~~~~~~~~~~~~~~~~~~~w~ 143 (144)
T 1i5g_A 74 AEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVKSIPTLVGVEAD---SGNIITTQARTMVVKDPEAKDFPWP 143 (144)
T ss_dssp HHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETT---TCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred HHHHHHHHHhCCccccccCchHHHHHHHHHcCCCCCCEEEEEECC---CCcEEeccchhhhhhCcccccCCCC
Confidence 9999999999999888876545558999999999999999999 9 999999998877766543 336653
No 11
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.88 E-value=5.7e-22 Score=170.96 Aligned_cols=141 Identities=24% Similarity=0.387 Sum_probs=122.0
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
.+|..+|+|.+ + +|+ .+++++++||+++|+||++||++|+.+.|.|.+++++++++ +++|++|++|.+
T Consensus 4 ~~G~~~P~f~l~~-~g~-~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~---------~~~~v~v~~d~~ 72 (152)
T 3gl3_A 4 DKGDKAPDFALPG-KTG-VVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK---------GFQVVAVNLDAK 72 (152)
T ss_dssp CTTSBCCCCEEEB-SSS-EEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG---------TEEEEEEECCSS
T ss_pred CCCCcCCceEeeC-CCC-eEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC---------CeEEEEEECCCC
Confidence 36889999999 8 999 99999999999999999999999999999999999999876 799999999999
Q ss_pred HHHHHHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcccchhhhhccccCCCCCHHHHHHHHHHHHH
Q 013684 290 QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEE 369 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~i~~ 369 (438)
.+.+++++++++ +.+++..|....+.+.|++.++|+++|||++|+++.+. .| ..+...++|.+.|++
T Consensus 73 ~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~-------~g-----~~~~~~~~l~~~i~~ 139 (152)
T 3gl3_A 73 TGDAMKFLAQVP-AEFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGKVLLQH-------VG-----FRPADKEALEQQILA 139 (152)
T ss_dssp HHHHHHHHHHSC-CCSEEEECTTCHHHHHTTCCSSSEEEEECTTSBEEEEE-------ES-----CCTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CCCceeECCcchhHHHcCCCCCCeEEEECCCCCEEEEE-------cc-----CCCcCHHHHHHHHHH
Confidence 999999999988 68899888889999999999999999999999999874 22 223345677777777
Q ss_pred HhccCC
Q 013684 370 EAKNLP 375 (438)
Q Consensus 370 ~~~~~~ 375 (438)
.+...+
T Consensus 140 ~~~~~~ 145 (152)
T 3gl3_A 140 ALGGNE 145 (152)
T ss_dssp HTC---
T ss_pred HHcccc
Confidence 665443
No 12
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.88 E-value=5.6e-22 Score=182.45 Aligned_cols=151 Identities=9% Similarity=0.082 Sum_probs=125.7
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCC-EEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC-
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGK-TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD- 287 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk-~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d- 287 (438)
.+|..+|+|++ +.+|+ .+++++++|| ++||+||++|||+|+.++|.|.+++++|+++ +++||+|++|
T Consensus 33 ~~G~~aP~f~l~~~~G~-~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~v~vv~Vs~d~ 102 (218)
T 3u5r_E 33 TLGTRAADFVLPDAGGN-LFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQ---------GLAVVAINSND 102 (218)
T ss_dssp CTTCBCCCCCEECTTCC-EECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTT---------TEEEEEEECSC
T ss_pred CCCCcCCCcEeECCCCC-EEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhC---------CcEEEEEECCc
Confidence 36889999999 99999 9999999999 5999999999999999999999999999865 7999999996
Q ss_pred ------CCHHHHHHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcccchhhhhccccCCCCCHHHHH
Q 013684 288 ------RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLE 361 (438)
Q Consensus 288 ------~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~~~ 361 (438)
.+.+.+++|+++++ +.+|+..|....+.+.|++.++|+++|||++|++++++..+... .+. ......+
T Consensus 103 ~~~~~~d~~~~~~~~~~~~~-~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i~~~g~~d~~~-~~~----~~~~~~~ 176 (218)
T 3u5r_E 103 AQAFPEETLERVGAEVKAYG-YGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDAR-PGN----GKDVTGA 176 (218)
T ss_dssp TTTCGGGSHHHHHHHHHHHT-CCSCEEECTTCHHHHHHTCCEESEEEEECTTCBEEEEECSSSCC-TTS----CCCCCCH
T ss_pred ccccccCCHHHHHHHHHHhC-CCccEEECCccHHHHHcCCCCCCeEEEECCCCcEEEeccccccc-ccc----ccccCHH
Confidence 57788999999888 78999999889999999999999999999999999875433210 000 0111236
Q ss_pred HHHHHHHHHhccCCCc
Q 013684 362 FLEKQMEEEAKNLPRS 377 (438)
Q Consensus 362 ~L~~~i~~~~~~~~~~ 377 (438)
+|.++|++++++.+..
T Consensus 177 ~l~~~i~~ll~~~~~~ 192 (218)
T 3u5r_E 177 DLRAAVDAVLKGKDVG 192 (218)
T ss_dssp HHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHcCCCCC
Confidence 6777788877766543
No 13
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.88 E-value=3e-22 Score=175.21 Aligned_cols=138 Identities=15% Similarity=0.178 Sum_probs=121.0
Q ss_pred hhcCCCCCcc-CCCCCceeeccccCCCE-EEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCC
Q 013684 212 LTNHDRGYLL-GHPPDEKVPVSSLVGKT-VGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR 288 (438)
Q Consensus 212 ~g~~~~~f~l-~~~g~~~~~l~~~~gk~-vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~ 288 (438)
+|..+|+|++ +.+|+ .+++++++||+ ++|+|| ++||++|..++|.|.+++++|+++ +++||+|++|
T Consensus 4 ~G~~~P~f~l~~~~G~-~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~---------~v~vv~vs~d- 72 (161)
T 3drn_A 4 VGDKAPLFEGIADNGE-KISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY---------DVVVIGVSSD- 72 (161)
T ss_dssp TTSBCCCCEEEETTSC-EEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT---------CEEEEEEESC-
T ss_pred CCCcCCCeEeecCCCC-EEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc---------CCEEEEEeCC-
Confidence 6889999999 99999 99999999997 999999 999999999999999999999865 7999999998
Q ss_pred CHHHHHHHHhcCCCcccccCCchhHHHHHhcCcCc----eeeEEEECCCCcEEEcccchhhhhccccCCCCCHHHHHHHH
Q 013684 289 DQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQG----IPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLE 364 (438)
Q Consensus 289 ~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~----~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~~~~L~ 364 (438)
+.+.+++|+++++ +.+|+..|....+.+.|++.+ +|+++|||++|+|+++.. |.. .....++++.
T Consensus 73 ~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~-------g~~---~~~~~~~~il 141 (161)
T 3drn_A 73 DINSHKRFKEKYK-LPFILVSDPDKKIRELYGAKGFILPARITFVIDKKGIIRHIYN-------SQM---NPANHVNEAL 141 (161)
T ss_dssp CHHHHHHHHHHTT-CCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEE-------CSS---CTTHHHHHHH
T ss_pred CHHHHHHHHHHhC-CCceEEECCcHHHHHHcCCCCcCcccceEEEECCCCEEEEEEe-------cCC---CCCcCHHHHH
Confidence 6789999999988 679999998899999999999 999999999999998742 211 2345667777
Q ss_pred HHHHHHh
Q 013684 365 KQMEEEA 371 (438)
Q Consensus 365 ~~i~~~~ 371 (438)
+.|+++.
T Consensus 142 ~~l~~l~ 148 (161)
T 3drn_A 142 KALKQIK 148 (161)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 7776653
No 14
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.87 E-value=3.4e-22 Score=171.18 Aligned_cols=120 Identities=14% Similarity=0.218 Sum_probs=110.7
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
.+|..+|+|++ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.+++++++++ ++.|++|++|.+
T Consensus 6 ~~G~~~p~~~l~~~~g~-~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~---------~~~~v~v~~d~~ 75 (148)
T 3hcz_A 6 LLGKKAPNLYMTDTTGT-YRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK---------GIQVYAANIERK 75 (148)
T ss_dssp CTTSBCCCCCCBCTTSC-BCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG---------TEEEEEEECCSS
T ss_pred CCCCcCCceEEecCCCC-EEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC---------CEEEEEEEecCC
Confidence 46899999999 99999 99999999999999999999999999999999999999876 799999999988
Q ss_pred HHHHHHHHhcCCCcccccCCchhHH--HHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 290 QTSFESYFGTMPWLALPFGDPTIKE--LTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~p~~~d~~~~--l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
.+.++++++++++-.+++..|.... +.+.|++.++|+++|+|++|+++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~ 128 (148)
T 3hcz_A 76 DEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDKNKVIIAKR 128 (148)
T ss_dssp SHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEES
T ss_pred HHHHHHHHHHcCCCCceEEeccccchhHHHhcCcCCCCEEEEECCCCcEEEec
Confidence 8899999999885448887777666 99999999999999999999999874
No 15
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.87 E-value=1.5e-22 Score=177.98 Aligned_cols=125 Identities=37% Similarity=0.766 Sum_probs=112.8
Q ss_pred hhhcCCCCC-cc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCC
Q 013684 211 LLTNHDRGY-LL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR 288 (438)
Q Consensus 211 ~~g~~~~~f-~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~ 288 (438)
.+|..+|+| .+ +.+| .+++++++||++||+||++||++|+.++|.|.+++++|++. .+++||+|++|.
T Consensus 23 ~vG~~~P~f~~l~~~~g--~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~--------~~v~vv~v~~d~ 92 (165)
T 3s9f_A 23 GVAKHLGEALKLRKQAD--TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDS--------KNFEIILASWDE 92 (165)
T ss_dssp HHHHHHHHTSCEEETTE--EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--------TTEEEEEEECCC
T ss_pred hhcccCCcceeeecCCC--cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccC--------CCeEEEEEecCC
Confidence 467888998 78 8888 69999999999999999999999999999999999999862 279999999999
Q ss_pred CHHHHHHHHhcCCCcccccCCchh-HHHHHhcCcCceeeEEEECCC-CcEEEcccchhh
Q 013684 289 DQTSFESYFGTMPWLALPFGDPTI-KELTKYFDVQGIPCLVIIGPE-GKTVTKQGRNLI 345 (438)
Q Consensus 289 ~~~~~~~~~~~~~~~~~p~~~d~~-~~l~~~~~v~~~P~~~lid~~-G~i~~~~~~~~~ 345 (438)
+.+.+++++++++|..+|+..+.. ..+++.|+|.++|+++|||++ |+++++.+...+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~~~~~~~ 151 (165)
T 3s9f_A 93 EEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVESIPTLIGLNADTGDTVTTRARHAL 151 (165)
T ss_dssp SHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHH
T ss_pred CHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCCCCCEEEEEeCCCCEEEecccHHHH
Confidence 999999999999999999987654 899999999999999999998 999999765543
No 16
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.87 E-value=3.4e-22 Score=173.97 Aligned_cols=139 Identities=14% Similarity=0.209 Sum_probs=118.0
Q ss_pred hhhhcCCCCCcc-C-CCCCceeeccccCCCEEEEEEecCCChhhhhh-hHHHHHHHHHHHhhhhhcCCCCCCEEEEEEec
Q 013684 210 NLLTNHDRGYLL-G-HPPDEKVPVSSLVGKTVGLYFSARWCIPCEKF-MPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 286 (438)
Q Consensus 210 ~~~g~~~~~f~l-~-~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~-~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~ 286 (438)
.+.|.++|+|.+ + .+|+ .+++++++||+++|+||++||++|+.+ +|.|.+++++|+++ ++.||+|++
T Consensus 3 ~~~g~~~p~~~~~~~~~g~-~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~---------~v~~v~v~~ 72 (160)
T 3lor_A 3 SLDNAPLLELDVQEWVNHE-GLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES---------QVQVIGLHS 72 (160)
T ss_dssp -CTTCCBCCCCEEEESSSC-CCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT---------TEEEEEEEC
T ss_pred ccCCCcCCCcccccccCCC-ccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC---------CcEEEEEec
Confidence 456889999999 7 8999 999999999999999999999999995 99999999999865 799999998
Q ss_pred C------CCHHHHHHHHhcCCCcccccCCchhHH------HHHhcCcCceeeEEEECCCCcEEEcccchhhhhccccCCC
Q 013684 287 D------RDQTSFESYFGTMPWLALPFGDPTIKE------LTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYP 354 (438)
Q Consensus 287 d------~~~~~~~~~~~~~~~~~~p~~~d~~~~------l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~ 354 (438)
| .+.+.+++|+++++ +.+|+..|.... +.+.|+|.++|+++|||++|+++.+. .|.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~-------~g~---- 140 (160)
T 3lor_A 73 VFEHHDVMTPEALKVFIDEFG-IKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQ-------FGQ---- 140 (160)
T ss_dssp CCSCGGGSCHHHHHHHHHHTT-CCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEE-------ESC----
T ss_pred cccccccCCHHHHHHHHHHcC-CCCcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEe-------cCc----
Confidence 4 57889999999988 678888887776 99999999999999999999999873 232
Q ss_pred CCHHHHHHHHHHHHHHhcc
Q 013684 355 FTEAKLEFLEKQMEEEAKN 373 (438)
Q Consensus 355 ~~~~~~~~L~~~i~~~~~~ 373 (438)
.+ .++|.+.|+++++.
T Consensus 141 ~~---~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 141 VD---DFVLGLLLGSLLSE 156 (160)
T ss_dssp CC---HHHHHHHHHHHHTC
T ss_pred CC---HHHHHHHHHHHHhc
Confidence 22 24566667766654
No 17
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.87 E-value=3.4e-23 Score=180.68 Aligned_cols=137 Identities=24% Similarity=0.266 Sum_probs=110.4
Q ss_pred hhcCCCCCcc-CCCCCceeeccccCCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 212 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 212 ~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
+|..+|+|++ +.+|+ .+++++++||+++|+|| ++|||+|..++|.|.++++++++. ++++++||.| +
T Consensus 6 vG~~aPdF~l~~~~G~-~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~---------~~~~v~vs~d-~ 74 (157)
T 4g2e_A 6 IGELAPDFELPDTELK-KVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV---------NAVVLGISVD-P 74 (157)
T ss_dssp TTSBCCCCEEEBTTSC-EEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGC---------SSEEEEEESS-C
T ss_pred CCCCCcCeEeECCCCC-EEeHHHHCCCeEEEEecCCCCCCccccchhhccccccccccc---------CceEeeeccc-c
Confidence 6899999999 99999 99999999999999999 999999999999999999999865 8999999998 5
Q ss_pred HHHHHHHHhcCCCcccccCCchhHHHHHhcCcC-----------ceeeEEEECCCCcEEEcccchhhhhccccCCCCCHH
Q 013684 290 QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEA 358 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~ 358 (438)
.+..++|.++++ ++||++.|.+.++++.|||. ..|++||||++|+|+++.. |.. +..+.
T Consensus 75 ~~~~~~~~~~~~-~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~-------~~~--~~~~~ 144 (157)
T 4g2e_A 75 PFSNKAFKEHNK-LNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWV-------SDD--PTKEP 144 (157)
T ss_dssp HHHHHHHHHHTT-CCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEE-------ESS--TTCCC
T ss_pred hhHHHHHHHHcC-CcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEE-------CCC--CCCCC
Confidence 678889998888 78999999999999999983 4789999999999998742 211 12333
Q ss_pred HHHHHHHHHHH
Q 013684 359 KLEFLEKQMEE 369 (438)
Q Consensus 359 ~~~~L~~~i~~ 369 (438)
..+++.+.|+.
T Consensus 145 ~~~eil~~l~~ 155 (157)
T 4g2e_A 145 PYDEIEKVVKS 155 (157)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 45666666654
No 18
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.87 E-value=5.2e-22 Score=172.47 Aligned_cols=137 Identities=13% Similarity=0.255 Sum_probs=115.4
Q ss_pred hhcCCCCCcc-C--CCCCceeeccccCCCEEEEEEecCCChhhhhh-hHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC
Q 013684 212 LTNHDRGYLL-G--HPPDEKVPVSSLVGKTVGLYFSARWCIPCEKF-MPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 287 (438)
Q Consensus 212 ~g~~~~~f~l-~--~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~-~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d 287 (438)
.|..+|+|++ + .+|+ .+++++++||+++|+||++||++|+.+ +|.|.+++++|+++ ++.||+|++|
T Consensus 2 ~g~~aP~f~l~~~~~~g~-~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~---------~v~~v~v~~~ 71 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSAT-DLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED---------KVAVLGLHTV 71 (158)
T ss_dssp CCEECCCCCEEEEESCSS-CCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT---------TEEEEEEECC
T ss_pred CCCcCCCceehhhhcCCC-ccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC---------CEEEEEEEec
Confidence 3678999999 7 3788 999999999999999999999999996 99999999999855 7999999984
Q ss_pred ------CCHHHHHHHHhcCCCcccccCCchhH-----HHHHhcCcCceeeEEEECCCCcEEEcccchhhhhccccCCCCC
Q 013684 288 ------RDQTSFESYFGTMPWLALPFGDPTIK-----ELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFT 356 (438)
Q Consensus 288 ------~~~~~~~~~~~~~~~~~~p~~~d~~~-----~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~ 356 (438)
.+.+.+++|+++++ +.+|+..|... .+.+.|++.++|+++|||++|+++.+. .|. .+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~-------~g~----~~ 139 (158)
T 3eyt_A 72 FEHHEAMTPISLKAFLHEYR-IKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAHH-------FGD----VS 139 (158)
T ss_dssp CSCGGGSCHHHHHHHHHHTT-CCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEEE-------ESC----CC
T ss_pred ccccccCCHHHHHHHHHHcC-CCceEEEcCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEEE-------eCC----CC
Confidence 47889999999988 67888777666 799999999999999999999999874 231 22
Q ss_pred HHHHHHHHHHHHHHhcc
Q 013684 357 EAKLEFLEKQMEEEAKN 373 (438)
Q Consensus 357 ~~~~~~L~~~i~~~~~~ 373 (438)
. ++|.+.|+++++.
T Consensus 140 ~---~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 140 E---LLLGAEIATLLGE 153 (158)
T ss_dssp H---HHHHHHHHHHHTS
T ss_pred H---HHHHHHHHHHhcc
Confidence 2 4566667766654
No 19
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.87 E-value=7.2e-22 Score=169.17 Aligned_cols=119 Identities=19% Similarity=0.318 Sum_probs=109.5
Q ss_pred hhhcCCCCCcc-CCCCCceeecc--ccCCCEEEEEEecCCChhhhhhhHHHHHHHHHH-HhhhhhcCCCCCCEEEEEEec
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVS--SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKI-KQNLVEKGDALEDFEVVFVST 286 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~--~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~-~~~~~~~~~~~~~~~vv~is~ 286 (438)
.+|..+|+|.+ +.+|+ .++++ +++||+++|+||++||++|+.+.|.|.++++++ +++ ++.|++|++
T Consensus 6 ~~g~~~p~~~l~~~~g~-~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~---------~~~~v~v~~ 75 (148)
T 3fkf_A 6 TVGKSAPYFSLPNEKGE-KLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNK---------NFAMLGISL 75 (148)
T ss_dssp CTTSBCCCCCEEBTTSC-EECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCT---------TEEEEEEEC
T ss_pred cCCCcCCCeEeeCCCCC-EEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCC---------CeEEEEEEC
Confidence 36889999999 99999 99999 999999999999999999999999999999999 644 799999999
Q ss_pred CCCHHHHHHHHhcCCCcccccCCch---hHHHHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 287 DRDQTSFESYFGTMPWLALPFGDPT---IKELTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 287 d~~~~~~~~~~~~~~~~~~p~~~d~---~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
|.+.+.+++++++++ +.+|+..|. ...+++.|++.++|+++|+|++|+++.+.
T Consensus 76 d~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 131 (148)
T 3fkf_A 76 DIDREAWETAIKKDT-LSWDQVCDFTGLSSETAKQYAILTLPTNILLSPTGKILARD 131 (148)
T ss_dssp CSCHHHHHHHHHHTT-CCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEES
T ss_pred CCCHHHHHHHHHHcC-CCceEEEccCCcchHHHHhcCCCCcCEEEEECCCCeEEEec
Confidence 999999999999888 577777765 77999999999999999999999999884
No 20
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.87 E-value=3e-21 Score=178.06 Aligned_cols=187 Identities=14% Similarity=0.176 Sum_probs=124.4
Q ss_pred cccCCCEEEEEEecc-CCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHh
Q 013684 67 SDLEGKVTALYFSAN-WYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALN 145 (438)
Q Consensus 67 ~~~~gk~vll~F~a~-wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~ 145 (438)
...++++++++||++ ||++|+.+.|.|.++++. . .++.++.|+.|.... .+++
T Consensus 18 ~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~---~-~~v~~~~vd~~~~~~----------------------~~~~ 71 (226)
T 1a8l_A 18 SKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL---T-DKLSYEIVDFDTPEG----------------------KELA 71 (226)
T ss_dssp GGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT---C-TTEEEEEEETTSHHH----------------------HHHH
T ss_pred HhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh---C-CceEEEEEeCCCccc----------------------HHHH
Confidence 345567889999999 999999999999998754 2 248888887663212 7889
Q ss_pred hhcCcCccceEEEecCCCCCCCcc-cccchhHHhhhCCCCccCChhHHHHHHHHHHhhhhHHHHHhhhhcCCCCCccCCC
Q 013684 146 RKFDIEGIPCLVVLQPYDDKDDAT-LHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRGYLLGHP 224 (438)
Q Consensus 146 ~~~~v~~~P~~~lvd~~~~~G~v~-~~~~~~~i~~~~~~a~p~~~e~l~~L~~~~~~~~~~~~~~~~~g~~~~~f~l~~~ 224 (438)
+.|+|.++|+++++. +|... .+.. | .+...+....+....... + ... ..+
T Consensus 72 ~~~~v~~~Pt~~~~~----~g~~~~~~~~-------G---~~~~~~l~~~l~~~l~~~----------~-~~~----~l~ 122 (226)
T 1a8l_A 72 KRYRIDRAPATTITQ----DGKDFGVRYF-------G---LPAGHEFAAFLEDIVDVS----------R-EET----NLM 122 (226)
T ss_dssp HHTTCCSSSEEEEEE----TTBCCSEEEE-------S---CCCTTHHHHHHHHHHHHH----------H-TCC----CCC
T ss_pred HHcCCCcCceEEEEc----CCceeeEEEe-------c---cCcHHHHHHHHHHHHhhc----------C-CCC----CCC
Confidence 999999999999995 55322 1111 1 111111111111111100 0 000 111
Q ss_pred CCceee-ccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCc
Q 013684 225 PDEKVP-VSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWL 303 (438)
Q Consensus 225 g~~~~~-l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~ 303 (438)
.. .+. +....+++++|.||++||++|+.+.|.+.+++++++++ ..+++.++.|+++..
T Consensus 123 ~~-~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~------~~~~v~~~~vd~~~~-------------- 181 (226)
T 1a8l_A 123 DE-TKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKA------GKGKILGDMVEAIEY-------------- 181 (226)
T ss_dssp HH-HHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHT------TCCCEEEEEEEGGGC--------------
T ss_pred HH-HHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccc------cCCcEEEEEEEcccC--------------
Confidence 21 111 12233556699999999999999999999999998731 012588888888754
Q ss_pred ccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 304 ALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 304 ~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
..+++.|+|.++||++++ ++|+.+.+
T Consensus 182 ---------~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 207 (226)
T 1a8l_A 182 ---------PEWADQYNVMAVPKIVIQ-VNGEDRVE 207 (226)
T ss_dssp ---------HHHHHHTTCCSSCEEEEE-ETTEEEEE
T ss_pred ---------HHHHHhCCCcccCeEEEE-eCCceeEE
Confidence 668899999999998888 78987765
No 21
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.87 E-value=9e-22 Score=168.26 Aligned_cols=138 Identities=33% Similarity=0.580 Sum_probs=121.3
Q ss_pred HhhccchhH-HHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCC
Q 013684 38 LIMSLSQWY-VQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE 116 (438)
Q Consensus 38 ~~g~~~p~f-~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~ 116 (438)
.+|..+|+| + +.+.+| .+++++++||+++|+||++||++|+.++|.|.++++++++. .++++++|++|.
T Consensus 3 ~~g~~~p~~~~--------l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~~vv~i~~d~ 72 (144)
T 1o73_A 3 GLAKYLPGATN--------LLSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA-KNFEVVLISWDE 72 (144)
T ss_dssp GGGGTSCTTCC--------BBCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCS
T ss_pred chhhhCccceE--------eecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccC-CCEEEEEEeCCC
Confidence 478899997 8 899999 99999999999999999999999999999999999999843 259999999999
Q ss_pred CHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEec-CCCCCCCcccccchhHHhhhCC-CCccCC
Q 013684 117 DLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQ-PYDDKDDATLHDGVELIYKYGI-RAFPFT 188 (438)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd-~~~~~G~v~~~~~~~~i~~~~~-~a~p~~ 188 (438)
+.+.+++++++++|..+++...+....+.+.|++.++|+++++| + +|+++.+.+.+.+..... ..|||.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~---~G~i~~~~~~~~~~~~~~~~~~~W~ 143 (144)
T 1o73_A 73 NESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVESIPTLITINAD---TGAIIGTQARTRVIEDPDGANFPWP 143 (144)
T ss_dssp SHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCCSSSEEEEEETT---TCCEEESCHHHHHHHCTTCTTTTCC
T ss_pred CHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCCCCCEEEEEECC---CCeEEecchhhHHhhCCCccCCCCC
Confidence 99999999999999888886545557899999999999999999 9 999999998776665544 336653
No 22
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.86 E-value=8.6e-22 Score=169.07 Aligned_cols=139 Identities=33% Similarity=0.609 Sum_probs=121.0
Q ss_pred Hhhccchh-HHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCC
Q 013684 38 LIMSLSQW-YVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE 116 (438)
Q Consensus 38 ~~g~~~p~-f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~ 116 (438)
.+|..+|+ |+ +.+.+| .+++++++||+++|+||++||++|+.++|.|.++++++++. .++++++|++|.
T Consensus 3 ~~~~~~P~~f~--------l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~~~vv~v~~d~ 72 (146)
T 1o8x_A 3 GLDKYLPGIEK--------LRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHES-KNFEVVFCTWDE 72 (146)
T ss_dssp CGGGTSTTCCE--------EEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECCC
T ss_pred chHhhCCCceE--------EEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhc-CCeEEEEEeCCC
Confidence 46888999 89 899999 99999999999999999999999999999999999999853 259999999999
Q ss_pred CHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEec-CCCCCCCcccccchhHHhhhCC-CCccCCh
Q 013684 117 DLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQ-PYDDKDDATLHDGVELIYKYGI-RAFPFTK 189 (438)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd-~~~~~G~v~~~~~~~~i~~~~~-~a~p~~~ 189 (438)
+.+.+++++++++|..+++...+....+++.|+|.++|++++|| + +|+++.+.+...+.+... ..++|..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid~~---~G~i~~~~~~~~~~~~~~~~~~~w~~ 144 (146)
T 1o8x_A 73 EEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVDAD---SGDVVTTRARATLVKDPEGEQFPWKD 144 (146)
T ss_dssp SHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCCSSSEEEEEETT---TCCEEESCHHHHHTTCTTCTTTTCCC
T ss_pred CHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCCCCCEEEEEECC---CCeEEEecchhHHhhCCccccCCCCC
Confidence 99999999999999888875445557899999999999999999 9 999999988776655443 3466643
No 23
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.86 E-value=9.5e-22 Score=172.05 Aligned_cols=138 Identities=14% Similarity=0.171 Sum_probs=120.8
Q ss_pred hhhcCCCCCc--c-CCCCCceeeccccCCCEEEEEEec-CCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEec
Q 013684 211 LLTNHDRGYL--L-GHPPDEKVPVSSLVGKTVGLYFSA-RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 286 (438)
Q Consensus 211 ~~g~~~~~f~--l-~~~g~~~~~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~ 286 (438)
.+|..+|+|+ + +.+|+ .+++++++||+++|+||+ +||++|..++|.|.+++++|+++ +++||+|++
T Consensus 8 ~~G~~~P~f~~~l~~~~G~-~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~---------~~~vv~vs~ 77 (163)
T 3gkn_A 8 VLELPAATFDLPLSLSGGT-QTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKA---------GAKILGVSR 77 (163)
T ss_dssp CCCCCGGGGGCCEECSTTC-EECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT---------TCEEEEEES
T ss_pred ccCCcCCCccccccCCCCC-EEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC---------CCEEEEEeC
Confidence 4689999999 9 99999 999999999999999998 99999999999999999999976 799999999
Q ss_pred CCCHHHHHHHHhcCCCcccccCCchhHHHHHhcCcCc------------eeeEEEECCCCcEEEcccchhhhhccccCCC
Q 013684 287 DRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQG------------IPCLVIIGPEGKTVTKQGRNLINLYQENAYP 354 (438)
Q Consensus 287 d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~------------~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~ 354 (438)
| +.+.+++|+++++ +.+|+..|....+.+.||+.. +|++||||++|+|++... + .
T Consensus 78 d-~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~-------~----~ 144 (163)
T 3gkn_A 78 D-SVKSHDNFCAKQG-FAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWR-------K----V 144 (163)
T ss_dssp S-CHHHHHHHHHHHC-CSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEEEEEC-------S----C
T ss_pred C-CHHHHHHHHHHhC-CCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEEEEEc-------C----C
Confidence 8 7888999999887 789999998899999999987 999999999999998741 1 1
Q ss_pred CCHHHHHHHHHHHHHHh
Q 013684 355 FTEAKLEFLEKQMEEEA 371 (438)
Q Consensus 355 ~~~~~~~~L~~~i~~~~ 371 (438)
.....++++.+.|+++.
T Consensus 145 ~~~~~~~~il~~l~~l~ 161 (163)
T 3gkn_A 145 KVAGHADAVLAALKAHA 161 (163)
T ss_dssp CSTTHHHHHHHHHHHHC
T ss_pred CcccCHHHHHHHHHHHh
Confidence 23455677777776654
No 24
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.86 E-value=1.5e-21 Score=167.57 Aligned_cols=124 Identities=40% Similarity=0.763 Sum_probs=112.6
Q ss_pred hhcCCCC-Ccc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 212 LTNHDRG-YLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 212 ~g~~~~~-f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
++..+|+ |++ +.+| .+++++++||+++|+||++||++|+.+.|.|.++++++++. .+++|++|++|.+
T Consensus 4 ~~~~~P~~f~l~~~~g--~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~--------~~~~vv~v~~d~~ 73 (146)
T 1o8x_A 4 LDKYLPGIEKLRRGDG--EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHES--------KNFEVVFCTWDEE 73 (146)
T ss_dssp GGGTSTTCCEEEETTE--EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--------TTEEEEEEECCCS
T ss_pred hHhhCCCceEEEcCCC--CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhc--------CCeEEEEEeCCCC
Confidence 5778999 899 8888 69999999999999999999999999999999999999842 2799999999999
Q ss_pred HHHHHHHHhcCCCcccccCC-chhHHHHHhcCcCceeeEEEEC-CCCcEEEcccchhh
Q 013684 290 QTSFESYFGTMPWLALPFGD-PTIKELTKYFDVQGIPCLVIIG-PEGKTVTKQGRNLI 345 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~p~~~-d~~~~l~~~~~v~~~P~~~lid-~~G~i~~~~~~~~~ 345 (438)
.+.+++++++++|..+|+.. |....+++.|+|.++|+++|+| ++|+++++.+...+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~ 131 (146)
T 1o8x_A 74 EDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVDADSGDVVTTRARATL 131 (146)
T ss_dssp HHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCCSSSEEEEEETTTCCEEESCHHHHH
T ss_pred HHHHHHHHHHCCceeeccchhhHHHHHHHHhCCCCCCEEEEEECCCCeEEEecchhHH
Confidence 99999999999999999876 6678999999999999999999 99999999765554
No 25
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.86 E-value=2.3e-21 Score=165.69 Aligned_cols=125 Identities=44% Similarity=0.791 Sum_probs=112.5
Q ss_pred hhhcCCCCC-cc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCC
Q 013684 211 LLTNHDRGY-LL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR 288 (438)
Q Consensus 211 ~~g~~~~~f-~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~ 288 (438)
.+|..+|+| ++ +.+| .+++++++||+++|+||++||++|+.+.|.|.++++++++. .+++|++|++|.
T Consensus 3 ~~g~~~p~~~~l~~~~g--~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--------~~~~vv~i~~d~ 72 (144)
T 1o73_A 3 GLAKYLPGATNLLSKSG--EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA--------KNFEVVLISWDE 72 (144)
T ss_dssp GGGGTSCTTCCBBCTTS--CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--------TTEEEEEEECCS
T ss_pred chhhhCccceEeecCCC--cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccC--------CCEEEEEEeCCC
Confidence 367889997 88 8888 59999999999999999999999999999999999999732 279999999999
Q ss_pred CHHHHHHHHhcCCCcccccCC-chhHHHHHhcCcCceeeEEEEC-CCCcEEEcccchhh
Q 013684 289 DQTSFESYFGTMPWLALPFGD-PTIKELTKYFDVQGIPCLVIIG-PEGKTVTKQGRNLI 345 (438)
Q Consensus 289 ~~~~~~~~~~~~~~~~~p~~~-d~~~~l~~~~~v~~~P~~~lid-~~G~i~~~~~~~~~ 345 (438)
+.+.+++++++++|..+|+.. +....+.+.|+|.++|+++|+| ++|+++++.+...+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~~~~~~~ 131 (144)
T 1o73_A 73 NESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVESIPTLITINADTGAIIGTQARTRV 131 (144)
T ss_dssp SHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCCSSSEEEEEETTTCCEEESCHHHHH
T ss_pred CHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCCCCCEEEEEECCCCeEEecchhhHH
Confidence 999999999999999999876 5678899999999999999999 89999999765544
No 26
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.86 E-value=1.2e-21 Score=169.27 Aligned_cols=119 Identities=25% Similarity=0.462 Sum_probs=110.6
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
.+|..+|+|++ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.++++++++. ++.|++|++|.+
T Consensus 3 ~~G~~~p~~~l~~~~g~-~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~---------~~~~v~v~~d~~ 72 (154)
T 3kcm_A 3 LEENPAPDFTLNTLNGE-VVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGK---------PFRMLCVSIDEG 72 (154)
T ss_dssp CTTSBCCCCEEECTTSC-EEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTS---------SEEEEEEECCTT
T ss_pred CCCCCCCCeEEEcCCCC-EEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC---------CeEEEEEEcCCc
Confidence 46889999999 99999 99999999999999999999999999999999999999864 799999999987
Q ss_pred -HHHHHHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 290 -QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 290 -~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
.+.+++++++++ +.+|+..|....+.+.|++.++|+++|||++|+++.+.
T Consensus 73 ~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 123 (154)
T 3kcm_A 73 GKVAVEEFFRKTG-FTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKKV 123 (154)
T ss_dssp HHHHHHHHHHHHC-CCCCEEECTTCHHHHHHTCCSBCEEEEECTTSBEEEEE
T ss_pred chHHHHHHHHHcC-CCeeEEecCchHHHHHhCCCCCCeEEEECCCCcEEEEE
Confidence 788999999887 67899889889999999999999999999999999873
No 27
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.86 E-value=3.9e-21 Score=167.94 Aligned_cols=138 Identities=18% Similarity=0.292 Sum_probs=116.5
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
.+|..+|+|.+ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.+++++++++ ++.+++|++|.+
T Consensus 9 ~~g~~~p~~~l~~~~g~-~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~---------~v~~v~v~~d~~ 78 (165)
T 3or5_A 9 ARPTPAPSFSGVTVDGK-PFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR---------GFTFVGIAVNEQ 78 (165)
T ss_dssp CCCCBCCCCEEECTTSC-EEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT---------TEEEEEEECSCC
T ss_pred cCCCCCCCceeeCCCCC-EechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC---------CeEEEEEECCCC
Confidence 46889999999 99999 99999999999999999999999999999999999999865 799999999998
Q ss_pred HHHHHHHHhcCCCcccccCCchhHHHHHhc------CcCceeeEEEECCCCcEEEcccchhhhhccccCCCCCHHHHHHH
Q 013684 290 QTSFESYFGTMPWLALPFGDPTIKELTKYF------DVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFL 363 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~------~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~~~~L 363 (438)
.+.+++++++++ +.+|+..+.. .+.+.| ++.++|+++|||++|+++.+. .|. .+ .++|
T Consensus 79 ~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~-------~g~----~~---~~~l 142 (165)
T 3or5_A 79 LPNVKNYMKTQG-IIYPVMMATP-ELIRAFNGYIDGGITGIPTSFVIDASGNVSGVI-------VGP----RS---KADF 142 (165)
T ss_dssp HHHHHHHHHHHT-CCSCEEECCH-HHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEE-------CSC----CC---HHHH
T ss_pred HHHHHHHHHHcC-CCCceEecCH-HHHHHHhhhhccCCCCCCeEEEECCCCcEEEEE-------cCC----CC---HHHH
Confidence 999999999887 6778777754 778888 899999999999999999873 221 22 3556
Q ss_pred HHHHHHHhccC
Q 013684 364 EKQMEEEAKNL 374 (438)
Q Consensus 364 ~~~i~~~~~~~ 374 (438)
.+.|+++++..
T Consensus 143 ~~~l~~~l~~~ 153 (165)
T 3or5_A 143 DRIVKMALGAK 153 (165)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHHhhh
Confidence 66666666543
No 28
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.86 E-value=3.1e-21 Score=167.07 Aligned_cols=117 Identities=14% Similarity=0.183 Sum_probs=105.3
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
..|..+|+|++ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+++++|+++ +++|++|++|..
T Consensus 10 ~~g~~~p~f~l~~~~G~-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~---------~~~vv~i~~d~~ 79 (152)
T 2lrt_A 10 IKEASIIDIQLKDLKGN-TRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ---------GFEIYQISLDGD 79 (152)
T ss_dssp SCTTCSCCCCEEBTTSC-EECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG---------TEEEEEEECSCC
T ss_pred ccCCCCCCeEEEcCCCC-EEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC---------CeEEEEEEccCC
Confidence 45788999999 99999 99999999999999999999999999999999999999876 799999999999
Q ss_pred HHHHHHHHhcCCCcccccCCchhHH---HHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 290 QTSFESYFGTMPWLALPFGDPTIKE---LTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~p~~~d~~~~---l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
.+.++++..+. .+|+..|.... +.+.|++.++|+++|||++|+++.+.
T Consensus 80 ~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 130 (152)
T 2lrt_A 80 EHFWKTSADNL---PWVCVRDANGAYSSYISLYNVTNLPSVFLVNRNNELSARG 130 (152)
T ss_dssp HHHHHHHHTTC---SSEEEECSSGGGCHHHHHHTCCSCSEEEEEETTTEEEEET
T ss_pred HHHHHHHHhCC---CceEEECCCCcchHHHHHcCcccCceEEEECCCCeEEEec
Confidence 88888888764 45666665554 99999999999999999999999884
No 29
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.86 E-value=8e-22 Score=168.47 Aligned_cols=124 Identities=16% Similarity=0.178 Sum_probs=108.5
Q ss_pred HHhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHH---HHHHHhcCCCCEEEEEEe
Q 013684 37 FLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVD---VYEELRNNGSDFEVVFVS 113 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~---l~~~~~~~~~~~~iv~vs 113 (438)
..+|..+|+|+ +.+.+|+.+++++++||+++|+||++||++|+.++|.|.+ +++++++.+ +++++|+
T Consensus 5 ~~~G~~ap~f~--------l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~--~~vi~i~ 74 (142)
T 3eur_A 5 NRLGTKALNFT--------YTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKK--LKVLSIY 74 (142)
T ss_dssp TCTTSBCCCCE--------EEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTS--EEEEEEE
T ss_pred hcCCCccCCcE--------EEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCC--eEEEEEE
Confidence 45899999999 8999999999999999999999999999999999999999 999998865 9999999
Q ss_pred cCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 114 SDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 114 ~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
.|.+.+.+++++++++.......|.+....+.+.|++.++|+++|||+ +|+++.+..
T Consensus 75 ~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~~ 131 (142)
T 3eur_A 75 PDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYDLRAIPTLYLLDK---NKTVLLKDA 131 (142)
T ss_dssp CSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSCCTTCSEEEEECT---TCBEEEEEE
T ss_pred cCCCHHHHHHHHHhcccccccccCccchhhhhhhcCCCcCCeEEEECC---CCcEEecCC
Confidence 999999999999987643222224443346899999999999999999 999998754
No 30
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.86 E-value=7.8e-23 Score=179.71 Aligned_cols=141 Identities=18% Similarity=0.270 Sum_probs=119.2
Q ss_pred hhcCCCCCcc-CCCCCceeecccc--CCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC
Q 013684 212 LTNHDRGYLL-GHPPDEKVPVSSL--VGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 287 (438)
Q Consensus 212 ~g~~~~~f~l-~~~g~~~~~l~~~--~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d 287 (438)
+|..+|+|++ +.+|+ .++++++ +||+++|+|| ++|||+|..++|.|.+++++|++. ++++++||.|
T Consensus 7 vG~~aPdF~l~~~~G~-~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~---------~v~vv~is~d 76 (164)
T 4gqc_A 7 LGEKAPDFTLPNQDFE-PVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKA---------NAEVLAISVD 76 (164)
T ss_dssp TTSBCCCCEEEBTTSC-EEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGS---------SSEEEEEESS
T ss_pred CCCCCcCcEeECCCCC-EEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhcc---------CceEEEecCC
Confidence 6999999999 99999 9999998 8999999988 999999999999999999999876 8999999998
Q ss_pred CCHHHHHHHHhcCCCcccccCCchhHHHHHhcCcC----------ceeeEEEECCCCcEEEcccchhhhhccccCCCCCH
Q 013684 288 RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQ----------GIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTE 357 (438)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~----------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~ 357 (438)
+.+..++|.++++ ++||++.|.+.++++.|||. ..|++||||++|+|++...... +...
T Consensus 77 -~~~~~~~~~~~~~-~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~---------~~~~ 145 (164)
T 4gqc_A 77 -SPWCLKKFKDENR-LAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDN---------PLNE 145 (164)
T ss_dssp -CHHHHHHHHHHTT-CCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSC---------TTCC
T ss_pred -CHHHHHHHHHhcC-cccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCC---------CCCC
Confidence 6778889998887 78999999999999999983 4689999999999998742111 2333
Q ss_pred HHHHHHHHHHHHHhcc
Q 013684 358 AKLEFLEKQMEEEAKN 373 (438)
Q Consensus 358 ~~~~~L~~~i~~~~~~ 373 (438)
..++++.+++++++++
T Consensus 146 ~~~~eil~~l~~l~~e 161 (164)
T 4gqc_A 146 PDYDEVVREANKIAGE 161 (164)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcc
Confidence 3466777777766543
No 31
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.85 E-value=3.4e-21 Score=166.30 Aligned_cols=142 Identities=21% Similarity=0.279 Sum_probs=119.9
Q ss_pred hhhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC-
Q 013684 210 NLLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD- 287 (438)
Q Consensus 210 ~~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d- 287 (438)
.++|..+|+|++ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.+++++++++ ++.|++|+.+
T Consensus 2 ~~~G~~~p~~~l~~~~g~-~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~v~~~~ 71 (153)
T 2l5o_A 2 SLDSKTAPAFSLPDLHGK-TVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK---------NFQVLAVAQPI 71 (153)
T ss_dssp --CCTTCCSCEEECTTSC-EEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT---------TEEEEEEECTT
T ss_pred CCCCCCCCCcEeecCCCC-CccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC---------CeEEEEEecCC
Confidence 357889999999 99999 99999999999999999999999999999999999999865 7999999986
Q ss_pred CCHHHHHHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcccchhhhhccccCCCCCHHHHHHHHHHH
Q 013684 288 RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQM 367 (438)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~i 367 (438)
.+.+.+++++++++ +.+++..|....+.+.|++.++|+++|+|++|+++.+. .|. ...++|.+.|
T Consensus 72 ~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~~~~-------~g~-------~~~~~l~~~l 136 (153)
T 2l5o_A 72 DPIESVRQYVKDYG-LPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTY-------VGE-------PDFGKLYQEI 136 (153)
T ss_dssp SCHHHHHHHHHHTT-CCSEEEECSSCHHHHHHTCCSSSEEEEECSSSCCCEEE-------ESS-------CCHHHHHHHH
T ss_pred CCHHHHHHHHHHcC-CCceEEcCchHHHHHHcCCCccCeEEEECCCCcEEEEE-------cCC-------CCHHHHHHHH
Confidence 35678999999887 67888888888999999999999999999999998763 231 1235677777
Q ss_pred HHHhccCCC
Q 013684 368 EEEAKNLPR 376 (438)
Q Consensus 368 ~~~~~~~~~ 376 (438)
++++.....
T Consensus 137 ~~ll~~~~~ 145 (153)
T 2l5o_A 137 DTAWRNSDA 145 (153)
T ss_dssp HHHHHCCSS
T ss_pred HHHHHhhhh
Confidence 777665544
No 32
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.85 E-value=6.9e-21 Score=170.63 Aligned_cols=147 Identities=10% Similarity=0.073 Sum_probs=119.7
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC--
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD-- 287 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d-- 287 (438)
.+|..+|+|++ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+++++|+++ ++||+|++|
T Consensus 8 ~~g~~~p~f~l~~~~G~-~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~----------~~~v~v~~d~~ 76 (188)
T 2cvb_A 8 PLESPLIDAELPDPRGG-RYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK----------VAFVGINANDY 76 (188)
T ss_dssp CTTCBCCCCEEECTTSC-EEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT----------EEEEEEECCCT
T ss_pred CCCCCCCCceeecCCCC-EEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC----------eEEEEEEcCcc
Confidence 36889999999 99999 99999999999999999999999999999999999998742 899999996
Q ss_pred -----CCHHHHHHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcccchhhh-hccccCCCCCHHHHH
Q 013684 288 -----RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLIN-LYQENAYPFTEAKLE 361 (438)
Q Consensus 288 -----~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~-~~g~~~~~~~~~~~~ 361 (438)
.+.+.+++|+++++ +.+|+..|....+.+.|++.++|+++|||++|++++++..+... ..| +.+ .+
T Consensus 77 ~~~~~d~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g----~~~---~~ 148 (188)
T 2cvb_A 77 EKYPEDAPEKMAAFAEEHG-IFFPYLLDETQEVAKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPS----KVQ---SH 148 (188)
T ss_dssp TTCGGGSHHHHHHHHHHHT-CCSCEEECSSSHHHHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGG----GCC---CC
T ss_pred ccccccCHHHHHHHHHHhC-CCceEEECCcchHHHHcCCCCCCeEEEECCCCcEEEEEecCCcccccc----ccC---HH
Confidence 36678999999888 68899888889999999999999999999999999882211000 001 011 25
Q ss_pred HHHHHHHHHhccCCC
Q 013684 362 FLEKQMEEEAKNLPR 376 (438)
Q Consensus 362 ~L~~~i~~~~~~~~~ 376 (438)
+|.+.|++++++.+.
T Consensus 149 ~l~~~i~~ll~~~~~ 163 (188)
T 2cvb_A 149 DLEAAIEALLRGEEP 163 (188)
T ss_dssp HHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHcCCCC
Confidence 567777777765544
No 33
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.85 E-value=4.7e-21 Score=165.20 Aligned_cols=119 Identities=20% Similarity=0.385 Sum_probs=109.0
Q ss_pred hhcCCC-CCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 212 LTNHDR-GYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 212 ~g~~~~-~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
+|..+| +|++ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.+++++++++ ++.+++|++|.+
T Consensus 5 ~G~~~p~~f~l~~~~g~-~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~---------~~~~v~v~~d~~ 74 (152)
T 2lja_A 5 SGNPSAASFSYPDINGK-TVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGK---------DIHFVSLSCDKN 74 (152)
T ss_dssp TTCCCSSSCEEEETTTE-EEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTS---------SEEEEEEECCSC
T ss_pred cCCCCCcccEeecCCCC-EeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccC---------CeEEEEEEccCc
Confidence 688999 9999 99999 99999999999999999999999999999999999998754 799999999998
Q ss_pred HHHHHHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 290 QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
.+.+++++++.++-.+++..|....+.+.|++.++|+++|+|++|+++.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 125 (152)
T 2lja_A 75 KKAWENMVTKDQLKGIQLHMGTDRTFMDAYLINGIPRFILLDRDGKIISAN 125 (152)
T ss_dssp HHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCSSCCEEEECTTSCEEESS
T ss_pred HHHHHHHHHhcCCCCceeecCcchhHHHHcCcCCCCEEEEECCCCeEEEcc
Confidence 889999998877555667777778999999999999999999999999874
No 34
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.85 E-value=1.2e-20 Score=168.26 Aligned_cols=118 Identities=12% Similarity=0.122 Sum_probs=107.6
Q ss_pred hhcCCCCCcc-CC--CCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCE------EEE
Q 013684 212 LTNHDRGYLL-GH--PPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDF------EVV 282 (438)
Q Consensus 212 ~g~~~~~f~l-~~--~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~------~vv 282 (438)
.|..+|+|.+ +. +|+ .+++++++||++||+||++||++|+.++|.|.+++++|+++ ++ +|+
T Consensus 33 ~g~~~p~f~l~~~~~~g~-~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~~~~~v~~v 102 (183)
T 3lwa_A 33 DRQQLPDIGGDSLMEEGT-QINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAA---------GNGDTPGGTVL 102 (183)
T ss_dssp GCCCCCCCEEEBSSSTTC-EEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHC---------C---CCSEEEE
T ss_pred cCCCCCceeccccccCCc-EecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhc---------CCCccCCcEEE
Confidence 4778999999 99 999 99999999999999999999999999999999999999875 56 999
Q ss_pred EEecCC-CHHHHHHHHhcCCCcccccCCchhHHHHHhc---CcCceeeEEEECCCCcEEEcc
Q 013684 283 FVSTDR-DQTSFESYFGTMPWLALPFGDPTIKELTKYF---DVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 283 ~is~d~-~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~---~v~~~P~~~lid~~G~i~~~~ 340 (438)
+|++|. +.+.+++|+++++ +.+|+..|....+.+.| ++.++|+++|||++|+++.+.
T Consensus 103 ~v~~d~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 163 (183)
T 3lwa_A 103 GINVRDYSRDIAQDFVTDNG-LDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHRPAAVF 163 (183)
T ss_dssp EEECSCCCHHHHHHHHHHTT-CCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSCEEEEE
T ss_pred EEECCCCCHHHHHHHHHHcC-CCccEEECCcchHHHHhccCCCCCCCeEEEECCCCcEEEEE
Confidence 999998 7899999999988 77888888888888887 489999999999999999874
No 35
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.84 E-value=1.2e-20 Score=162.89 Aligned_cols=114 Identities=18% Similarity=0.299 Sum_probs=97.9
Q ss_pred CCCCCccCCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHH
Q 013684 215 HDRGYLLGHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFE 294 (438)
Q Consensus 215 ~~~~f~l~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~ 294 (438)
++++|.+..+|+ .+++++++||+++|+||++||++|+.++|.|.+++++|++. +++|++|++| +.+.++
T Consensus 4 pa~~~~~~~~G~-~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~---------~v~vv~v~~d-~~~~~~ 72 (151)
T 3raz_A 4 SADELAGWKDNT-PQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKG---------SVDMVGIALD-TSDNIG 72 (151)
T ss_dssp ---CEEETTTCC-EECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT---------TEEEEEEESS-CHHHHH
T ss_pred CcchhhcccCCC-EecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC---------CeEEEEEECC-ChHHHH
Confidence 344555468999 99999999999999999999999999999999999999654 7999999998 567899
Q ss_pred HHHhcCCCcccccCCc---hhHHHHHhcC--cCceeeEEEECCCCcEEEcc
Q 013684 295 SYFGTMPWLALPFGDP---TIKELTKYFD--VQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 295 ~~~~~~~~~~~p~~~d---~~~~l~~~~~--v~~~P~~~lid~~G~i~~~~ 340 (438)
+|+++++ +.+|+..+ ....+.+.|+ +.++|+++|||++|+++.+.
T Consensus 73 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 122 (151)
T 3raz_A 73 NFLKQTP-VSYPIWRYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTI 122 (151)
T ss_dssp HHHHHSC-CSSCEEEECCSCHHHHHHTTTCCSCCSSEEEEEETTTTEEEEC
T ss_pred HHHHHcC-CCCceEecCccchHHHHHHhCCccCCCCEEEEECCCCcEEEEE
Confidence 9999887 67777543 4678999999 99999999999999999874
No 36
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.84 E-value=1.4e-20 Score=168.81 Aligned_cols=160 Identities=13% Similarity=0.147 Sum_probs=124.5
Q ss_pred hhhcCCCCCcc-CC-CC--CceeeccccCCCEEEEEEec-CCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEe
Q 013684 211 LLTNHDRGYLL-GH-PP--DEKVPVSSLVGKTVGLYFSA-RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 285 (438)
Q Consensus 211 ~~g~~~~~f~l-~~-~g--~~~~~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is 285 (438)
.+|..+|+|++ +. +| + .+++++++||+++|+||+ +|||+|..++|.|++++++|+++ +++||+|+
T Consensus 2 ~~G~~aP~f~l~~~~~G~~~-~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~---------~v~vv~Is 71 (186)
T 1n8j_A 2 LINTKIKPFKNQAFKNGEFI-EVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKL---------GVDVYSVS 71 (186)
T ss_dssp CTTCBCCCCEEEEEETTEEE-EEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT---------TEEEEEEE
T ss_pred CCCCcCCCcEeecccCCcce-EEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC---------CCEEEEEE
Confidence 36889999999 88 58 8 999999999999999995 99999999999999999999876 79999999
Q ss_pred cCCCHHHHHHHHhcCC---CcccccCCchhHHHHHhcCcC------ceeeEEEECCCCcEEEcccchhhhhccccCCCCC
Q 013684 286 TDRDQTSFESYFGTMP---WLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFT 356 (438)
Q Consensus 286 ~d~~~~~~~~~~~~~~---~~~~p~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~ 356 (438)
+| +.+..++|+++++ .+.||+..|....+.+.||+. .+|++||||++|+|+++.. |......
T Consensus 72 ~d-~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~~-------~~~~~~~- 142 (186)
T 1n8j_A 72 TD-THFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEV-------TAEGIGR- 142 (186)
T ss_dssp SS-CHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEE-------ECTTBCC-
T ss_pred CC-CHHHHHHHHHHcCcccCCceeEEECCchHHHHHhCCccCCCCceeeEEEEECCCCeEEEEEe-------cCCCCCC-
Confidence 98 5677888888872 378899889889999999997 4799999999999998742 2111111
Q ss_pred HHHHHHHHHHHHHHhccCCCcccccccccccccccccCCCCC
Q 013684 357 EAKLEFLEKQMEEEAKNLPRSEFHIGHRHELNLVSEGTGGGP 398 (438)
Q Consensus 357 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (438)
..+++.+.|+.+.. ...+++..++..|..|...
T Consensus 143 --~~~~l~~~l~~l~~-------~~~~p~~~~p~~w~~~~~~ 175 (186)
T 1n8j_A 143 --DASDLLRKIKAAQY-------VAAHPGEVCPAKWKEGEAT 175 (186)
T ss_dssp --CHHHHHHHHHHHHH-------HHHSTTCBBCTTCCTTSCC
T ss_pred --CHHHHHHHHHHHHH-------HhhcCCCccCCCCCCCCcc
Confidence 24555556655432 1223355667667665544
No 37
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.84 E-value=5.9e-21 Score=167.24 Aligned_cols=116 Identities=16% Similarity=0.283 Sum_probs=107.6
Q ss_pred hhhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC-
Q 013684 210 NLLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD- 287 (438)
Q Consensus 210 ~~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d- 287 (438)
..+|..+|+|++ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+++++++ ++.|++|++|
T Consensus 11 ~~~g~~~p~~~l~~~~g~-~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-----------~v~vv~i~~d~ 78 (165)
T 3ha9_A 11 EEVLEREASFSLTTIDGE-VISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-----------EISVIAIDFWT 78 (165)
T ss_dssp HHHHHHHHCCCEEBTTSC-EECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-----------TEEEEEEECCS
T ss_pred ccccCcCCCCEeecCCCC-EeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-----------CcEEEEEEecc
Confidence 346888999999 99999 999999999999999999999999999999999999886 4899999999
Q ss_pred -----------------CCHHHHHHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEE
Q 013684 288 -----------------RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVT 338 (438)
Q Consensus 288 -----------------~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~ 338 (438)
.+.+.+++|++++++-.+|+..| ...+.+.|+|.++|+++|||++|+++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~v~~~P~~~lid~~G~i~~ 145 (165)
T 3ha9_A 79 AEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVEKFNVRSIDYIVIMDKSSNVLY 145 (165)
T ss_dssp HHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSEEEEC-CSHHHHHTTCCSSSEEEEEETTCCEEE
T ss_pred cccccccccccccCCCCCCHHHHHHHHHHcCCCCeeEEeC-hHHHHHHhCCCCceEEEEEcCCCcEEE
Confidence 78899999999988448888888 889999999999999999999999998
No 38
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.84 E-value=4.5e-21 Score=170.89 Aligned_cols=136 Identities=18% Similarity=0.126 Sum_probs=116.0
Q ss_pred hcCCCCCcc-CCCCCceeeccccCCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCH
Q 013684 213 TNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ 290 (438)
Q Consensus 213 g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~ 290 (438)
|.++|+|++ +.+|+ .+++++++||+++|+|| ++||++|..++|.|.+++++|+++ +++||+|+.| +.
T Consensus 28 g~~aP~f~l~~~~G~-~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~---------~~~vv~Vs~D-~~ 96 (179)
T 3ixr_A 28 NHSLLNHPLMLSGST-CKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI---------NATVLGVSRD-SV 96 (179)
T ss_dssp CHHHHHCCEEEGGGE-EECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT---------TEEEEEEESC-CH
T ss_pred CCcCCCeeEECCCCC-EEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC---------CCEEEEEcCC-CH
Confidence 334999999 99999 99999999999999999 999999999999999999999876 8999999998 56
Q ss_pred HHHHHHHhcCCCcccccCCchhHHHHHhcCcCc------------eeeEEEECCCCcEEEcccchhhhhccccCCCCCHH
Q 013684 291 TSFESYFGTMPWLALPFGDPTIKELTKYFDVQG------------IPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEA 358 (438)
Q Consensus 291 ~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~------------~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~ 358 (438)
+..++|+++++ +.||+..|....+++.|++.. +|++||||++|+|++... + .....
T Consensus 97 ~~~~~~~~~~~-~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~-------~----~~~~~ 164 (179)
T 3ixr_A 97 KSHDSFCAKQG-FTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWR-------Q----VKVPG 164 (179)
T ss_dssp HHHHHHHHHHT-CCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEEC-------S----CCSTT
T ss_pred HHHHHHHHHcC-CceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEc-------C----CCCCC
Confidence 77888988877 789999998899999999964 588999999999998741 1 12345
Q ss_pred HHHHHHHHHHHHh
Q 013684 359 KLEFLEKQMEEEA 371 (438)
Q Consensus 359 ~~~~L~~~i~~~~ 371 (438)
.++++.+.|+++.
T Consensus 165 ~~~~il~~l~~l~ 177 (179)
T 3ixr_A 165 HAEEVLNKLKAHA 177 (179)
T ss_dssp HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 5677777777654
No 39
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.84 E-value=5.5e-21 Score=162.93 Aligned_cols=121 Identities=17% Similarity=0.239 Sum_probs=104.1
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHH---HHHHHhcCCCCEEEEEEec
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVD---VYEELRNNGSDFEVVFVSS 114 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~---l~~~~~~~~~~~~iv~vs~ 114 (438)
.+|.++|+|+ +.+.+|+.+++++++||+++|+||++||++|+.++|.|.+ +++++++.+ +++++|++
T Consensus 2 ~~G~~~p~f~--------l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~--~~~v~v~~ 71 (142)
T 3ewl_A 2 NAGMKAADFT--------YVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGT--LRVLAIYP 71 (142)
T ss_dssp CTTSBCCCCE--------EECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTS--EEEEEEEC
T ss_pred CCCCcCCCCE--------EECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCC--eEEEEEEe
Confidence 3799999999 9999999999999999999999999999999999999998 999998865 99999999
Q ss_pred CCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCcccc
Q 013684 115 DEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 115 D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
|.+.+.++++.+++++......|........+.|++.++|+++|||+ +|+++.+
T Consensus 72 d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~ 125 (142)
T 3ewl_A 72 DENREEWATKAVYMPQGWIVGWNKAGDIRTRQLYDIRATPTIYLLDG---RKRVILK 125 (142)
T ss_dssp SSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCSCCCSSSEEEEECT---TCBEEEC
T ss_pred cCCHHHHHHHHHHcCCCcceeeCCccchhhHHHcCCCCCCeEEEECC---CCCEEec
Confidence 99999999999987754333334442122245899999999999999 9999874
No 40
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.84 E-value=1.2e-20 Score=160.68 Aligned_cols=118 Identities=20% Similarity=0.393 Sum_probs=107.6
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCC-
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR- 288 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~- 288 (438)
.+|..+|+|.+ +.+|+ .+++++ +||+++|+||++||++|+.+.|.|.++++++++. ++.+++|++|.
T Consensus 10 ~~g~~~p~~~l~~~~g~-~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~---------~~~~v~v~~d~~ 78 (145)
T 3erw_A 10 KQPAVPAVFLMKTIEGE-DISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSD---------SVKLVTVNLVNS 78 (145)
T ss_dssp --CCSCCEEEEECTTSC-EEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCS---------SEEEEEEECGGG
T ss_pred cCCCcCCCceeecCCCC-EEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCC---------CEEEEEEEccCC
Confidence 46889999999 99999 999999 9999999999999999999999999999998744 79999999985
Q ss_pred --CHHHHHHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 289 --DQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 289 --~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
+.+.+++++++++ +.+|+..|....+.+.|++.++|+++|+|++|+++.+.
T Consensus 79 ~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 131 (145)
T 3erw_A 79 EQNQQVVEDFIKANK-LTFPIVLDSKGELMKEYHIITIPTSFLLNEKGEIEKTK 131 (145)
T ss_dssp SSCHHHHHHHHHHTT-CCSCEEECSSSHHHHHTTCCEESEEEEECTTCCEEEEE
T ss_pred cCCHHHHHHHHHHcC-CceeEEEcCchhHHHhcCcCccCeEEEEcCCCcEEEEE
Confidence 7889999999887 78999888889999999999999999999999998863
No 41
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.83 E-value=2.7e-20 Score=166.36 Aligned_cols=119 Identities=21% Similarity=0.369 Sum_probs=108.0
Q ss_pred hhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC-
Q 013684 212 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD- 289 (438)
Q Consensus 212 ~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~- 289 (438)
+|..+|+|++ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+++++|++. +++|++|++|.+
T Consensus 36 ~g~~~p~f~l~~~~G~-~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~v~~d~~~ 105 (186)
T 1jfu_A 36 APLKLPDLAFEDADGK-PKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGP---------NFEVVAINIDTRD 105 (186)
T ss_dssp SCCBCCCCEEECTTSC-EEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBT---------TEEEEEEECCCSC
T ss_pred CCCcCCCcEeEcCCCC-EeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccC---------CcEEEEEECCCCC
Confidence 5888999999 99999 99999999999999999999999999999999999999754 799999999864
Q ss_pred HHHHHHHHhcCCCcccccCCchhHHHHHhcCcC----ceeeEEEECCCCcEEEcc
Q 013684 290 QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQ----GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~----~~P~~~lid~~G~i~~~~ 340 (438)
.+.+++++++++.-.+|+..|....+.+.|++. ++|+++|||++|+++.+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~ 160 (186)
T 1jfu_A 106 PEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATI 160 (186)
T ss_dssp TTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEEE
T ss_pred HHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEEEE
Confidence 578889999888556888888888999999986 999999999999999874
No 42
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.83 E-value=3e-21 Score=165.06 Aligned_cols=121 Identities=12% Similarity=0.037 Sum_probs=100.2
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDED 117 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~ 117 (438)
.+|..+|+|+ + +.+|+.+++++++||+++|+||++||++|+.++|.|.++++++++.+ +++++|++|.+
T Consensus 8 ~~G~~~P~f~--------l-~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~--~~vv~vs~d~~ 76 (143)
T 4fo5_A 8 NPGDLAPRIE--------F-LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDK--IAMCSISMDEK 76 (143)
T ss_dssp STTSBCCCCC--------C------CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTT--EEEEEEECCSC
T ss_pred CCcccCCceE--------E-cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCC--EEEEEEEccCC
Confidence 4799999999 8 89999999999999999999999999999999999999999998765 99999999999
Q ss_pred HHHHHHhHhcCC--c-ccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 118 LNAFNNYRACMP--W-LAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 118 ~~~~~~~~~~~~--~-~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
.+.+++++++.+ | ..+.. .......+.+.|++.++|+++|||+ +|+++.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~~ 131 (143)
T 4fo5_A 77 ESIFTETVKIDKLDLSTQFHE-GLGKESELYKKYDLRKGFKNFLIND---EGVIIAANV 131 (143)
T ss_dssp HHHHHHHHHHHTCCGGGEEEC-TTGGGSHHHHHTTGGGCCCEEEECT---TSBEEEESC
T ss_pred HHHHHHHHHHhCCCCceeeec-ccccchHHHHHcCCCCCCcEEEECC---CCEEEEccC
Confidence 999999998654 4 22222 2222368899999999999999999 999987754
No 43
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.83 E-value=9.7e-21 Score=164.98 Aligned_cols=137 Identities=12% Similarity=0.163 Sum_probs=116.8
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCC-EEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGK-TVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 287 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk-~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d 287 (438)
.+|..+|+|++ +.+|+ .+++++++|| +++|+|| ++||++|+.++|.|.+++++|+++ +++|++|++|
T Consensus 10 ~~G~~~p~f~l~~~~G~-~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~---------~~~vv~is~d 79 (160)
T 1xvw_A 10 NVGATAPDFTLRDQNQQ-LVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEND---------DSAALAISVG 79 (160)
T ss_dssp CTTSBCCCCEEECTTSC-EEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS---------SEEEEEEESC
T ss_pred CCCCCCCCeEeEcCCCC-EEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHC---------CcEEEEEeCC
Confidence 46889999999 99999 9999999998 9999998 999999999999999999998754 7999999998
Q ss_pred CCHHHHHHHHhcCCCcccccCCch--hHHHHHhcCcC----cee--eEEEECCCCcEEEcccchhhhhccccCCCCCHHH
Q 013684 288 RDQTSFESYFGTMPWLALPFGDPT--IKELTKYFDVQ----GIP--CLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAK 359 (438)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~p~~~d~--~~~l~~~~~v~----~~P--~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~ 359 (438)
+.+.+++|+++++ +.+|+..|. ...+.+.|++. ++| +++|||++|+++++.. |. ...+..
T Consensus 80 -~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~-------g~---~~~~~~ 147 (160)
T 1xvw_A 80 -PPPTHKIWATQSG-FTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEM-------KQ---PGEVRD 147 (160)
T ss_dssp -CHHHHHHHHHHHT-CCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEE-------CC---TTCCCC
T ss_pred -CHHHHHHHHHhcC-CCceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEe-------cC---CCCCCC
Confidence 5678999999888 588888885 78999999998 999 9999999999998742 32 112335
Q ss_pred HHHHHHHHHH
Q 013684 360 LEFLEKQMEE 369 (438)
Q Consensus 360 ~~~L~~~i~~ 369 (438)
++++.+.|++
T Consensus 148 ~~~l~~~l~~ 157 (160)
T 1xvw_A 148 QRLWTDALAA 157 (160)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6667776654
No 44
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.83 E-value=2.1e-20 Score=165.98 Aligned_cols=116 Identities=16% Similarity=0.195 Sum_probs=104.4
Q ss_pred hhhhcCCCCCcc-CCCC--CceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEec
Q 013684 210 NLLTNHDRGYLL-GHPP--DEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 286 (438)
Q Consensus 210 ~~~g~~~~~f~l-~~~g--~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~ 286 (438)
..+|..+|+|++ +.+| + .+++++++||+++|+||++||++|+.++|.|.+++++ ++.|++|++
T Consensus 30 ~~~G~~~P~f~l~~~~g~~~-~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-------------~v~vv~vs~ 95 (176)
T 3kh7_A 30 ALIGKPFPAFDLPSVQDPAR-RLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ-------------GVVIYGINY 95 (176)
T ss_dssp TTTTSBCCCCEEEBSSCTTS-EEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-------------TCEEEEEEE
T ss_pred cccCCcCCCcEecccCCCCc-eecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC-------------CCEEEEEeC
Confidence 357999999999 9998 7 8999999999999999999999999999999988764 379999999
Q ss_pred CCCHHHHHHHHhcCCCcccc-cCCchhHHHHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 287 DRDQTSFESYFGTMPWLALP-FGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 287 d~~~~~~~~~~~~~~~~~~p-~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
|.+.+.+++|+++++ +.++ +..|....+.+.|++.++|+++|||++|+++++.
T Consensus 96 ~d~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 149 (176)
T 3kh7_A 96 KDDNAAAIKWLNELH-NPYLLSISDADGTLGLDLGVYGAPETYLIDKQGIIRHKI 149 (176)
T ss_dssp SCCHHHHHHHHHHTT-CCCSEEEEETTCHHHHHHTCCSSCEEEEECTTCBEEEEE
T ss_pred CCCHHHHHHHHHHcC-CCCceEEECCcchHHHHcCCCCCCeEEEECCCCeEEEEE
Confidence 989999999999988 4454 4677888999999999999999999999999873
No 45
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.83 E-value=1.5e-20 Score=169.80 Aligned_cols=140 Identities=12% Similarity=0.158 Sum_probs=117.4
Q ss_pred hhcCCCCCcc-CCC-------------C--CceeeccccCCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCC
Q 013684 212 LTNHDRGYLL-GHP-------------P--DEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGD 274 (438)
Q Consensus 212 ~g~~~~~f~l-~~~-------------g--~~~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~ 274 (438)
+|..+|+|++ +.+ | + .+++++++||+++|+|| ++||++|+.++|.|.+++++|+++
T Consensus 6 ~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~-~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~------ 78 (195)
T 2bmx_A 6 IGDQFPAYQLTALIGGDLSKVDAKQPGDYFT-TITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR------ 78 (195)
T ss_dssp TTCBCCCCEEEEECSSCGGGSCCSSGGGGEE-EEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT------
T ss_pred CCCcCCCcCcccccccccccccccccCCCcc-EeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC------
Confidence 6889999999 777 6 7 99999999999999999 999999999999999999999865
Q ss_pred CCCCEEEEEEecCCCHHHHHHHHhcCC---CcccccCCchhHHHHHhcCcC-----ceeeEEEECCCCcEEEcccchhhh
Q 013684 275 ALEDFEVVFVSTDRDQTSFESYFGTMP---WLALPFGDPTIKELTKYFDVQ-----GIPCLVIIGPEGKTVTKQGRNLIN 346 (438)
Q Consensus 275 ~~~~~~vv~is~d~~~~~~~~~~~~~~---~~~~p~~~d~~~~l~~~~~v~-----~~P~~~lid~~G~i~~~~~~~~~~ 346 (438)
+++||+|++|. .+..++|.++++ .+.+|+..|....+.+.|++. ++|+++|||++|+++++.
T Consensus 79 ---~v~vv~Vs~d~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~------ 148 (195)
T 2bmx_A 79 ---DAQILGVSIDS-EFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLNADGVADRVTFIVDPNNEIQFVS------ 148 (195)
T ss_dssp ---TEEEEEEESSC-HHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEE------
T ss_pred ---CCEEEEEECCC-HHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCcccCCCccceEEEEcCCCeEEEEE------
Confidence 79999999985 678888888772 267888888889999999999 999999999999999874
Q ss_pred hccccCCCCCHHHHHHHHHHHHHHhc
Q 013684 347 LYQENAYPFTEAKLEFLEKQMEEEAK 372 (438)
Q Consensus 347 ~~g~~~~~~~~~~~~~L~~~i~~~~~ 372 (438)
.|..... ...++|.+.|+++..
T Consensus 149 -~g~~~~~---~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 149 -ATAGSVG---RNVDEVLRVLDALQS 170 (195)
T ss_dssp -EECTTCC---CCHHHHHHHHHHHHC
T ss_pred -ecCCCCC---CCHHHHHHHHHHHhh
Confidence 2322111 134677777777655
No 46
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.83 E-value=3.6e-20 Score=168.23 Aligned_cols=119 Identities=18% Similarity=0.181 Sum_probs=107.3
Q ss_pred hhhcCCCCCcc-CC--CC--CceeeccccCCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEE
Q 013684 211 LLTNHDRGYLL-GH--PP--DEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 284 (438)
Q Consensus 211 ~~g~~~~~f~l-~~--~g--~~~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~i 284 (438)
.+|..+|+|++ +. +| + .+++++++||+++|+|| ++||++|..++|.|.+++++|+++ +++||+|
T Consensus 7 ~~G~~aP~f~l~~~~~~g~~~-~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~---------~v~vi~I 76 (202)
T 1uul_A 7 EDLHPAPDFNETALMPNGTFK-KVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI---------GCEVLAC 76 (202)
T ss_dssp CTTSBCCCCEEEEECTTSCEE-EEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTT---------TEEEEEE
T ss_pred cCCCcCCCcEeeeeecCCCcc-EEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC---------CCEEEEE
Confidence 36899999999 76 78 7 99999999999999999 999999999999999999999865 7999999
Q ss_pred ecCCCHHHHHHHHhcC----C--CcccccCCchhHHHHHhcCcC------ceeeEEEECCCCcEEEcc
Q 013684 285 STDRDQTSFESYFGTM----P--WLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 285 s~d~~~~~~~~~~~~~----~--~~~~p~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~ 340 (438)
++| +.+..++|++++ + .+++|+..|...++.+.|++. ++|+++|||++|+++++.
T Consensus 77 s~D-~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~ 143 (202)
T 1uul_A 77 SMD-SEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQIT 143 (202)
T ss_dssp ESS-CHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred eCC-CHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCCCCceeeEEEEECCCCEEEEEE
Confidence 998 556788888876 1 378999999889999999999 999999999999999884
No 47
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.83 E-value=2.5e-20 Score=167.94 Aligned_cols=147 Identities=13% Similarity=0.165 Sum_probs=120.3
Q ss_pred hhcCCCCCcc--CCCCCceeeccccCCC-EEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC-
Q 013684 212 LTNHDRGYLL--GHPPDEKVPVSSLVGK-TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD- 287 (438)
Q Consensus 212 ~g~~~~~f~l--~~~g~~~~~l~~~~gk-~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d- 287 (438)
+|..+|+|++ +.+|+ .+++++++|| +++|+||++||++|+.++|.|.+++++|+++ +++|++|++|
T Consensus 20 ~g~~~p~f~l~~~~~G~-~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~v~vv~v~~d~ 89 (196)
T 2ywi_A 20 LGKQAPPFALTNVIDGN-VVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPK---------GVSFVAINSND 89 (196)
T ss_dssp TTCBCCCCEEEETTTCC-EEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG---------TCEEEEEECSC
T ss_pred cCCcCCceeeeecCCCC-EEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC---------CcEEEEEECCc
Confidence 5888999998 69999 9999999998 5999999999999999999999999999875 7999999997
Q ss_pred ------CCHHHHHHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcccchhhh--hccccCCCCCHHH
Q 013684 288 ------RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLIN--LYQENAYPFTEAK 359 (438)
Q Consensus 288 ------~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~--~~g~~~~~~~~~~ 359 (438)
.+.+.+++|+++++ +.+|+..|....+.+.|++.++|+++|||++|+++++...+... ..| +.+
T Consensus 90 ~~~~~~d~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g----~~~--- 161 (196)
T 2ywi_A 90 AEQYPEDSPENMKKVAEELG-YPFPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGI----PVT--- 161 (196)
T ss_dssp TTTCGGGSHHHHHHHHHHHT-CCSCEEECSSCHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCC----CCC---
T ss_pred cccccccCHHHHHHHHHHcC-CCceEEECCchHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccC----ccC---
Confidence 46788999999887 68898888888999999999999999999999999874321100 011 112
Q ss_pred HHHHHHHHHHHhccCCC
Q 013684 360 LEFLEKQMEEEAKNLPR 376 (438)
Q Consensus 360 ~~~L~~~i~~~~~~~~~ 376 (438)
.++|.+.|++++++.+.
T Consensus 162 ~~~l~~~i~~ll~~~~~ 178 (196)
T 2ywi_A 162 GESIRAALDALLEGRPV 178 (196)
T ss_dssp CHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 25666777776665443
No 48
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.83 E-value=4.9e-20 Score=159.24 Aligned_cols=136 Identities=21% Similarity=0.289 Sum_probs=116.1
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEec--C
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST--D 287 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~--d 287 (438)
.+|..+|+|.+ +.+|+ .+++++++ |+++|+||++||++|+.+.|.|.++++++ . +.+++|++ +
T Consensus 6 ~~g~~~p~f~l~~~~g~-~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~----------v~~v~v~~d~~ 71 (154)
T 3ia1_A 6 KPGEPLPDFLLLDPKGQ-PVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET--G----------VPFYVISREPR 71 (154)
T ss_dssp CSBEECCCCCEECTTSC-EECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH--C----------CCEEEEECCTT
T ss_pred CCCCcCCceEEECCCCC-EechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc--C----------CeEEEEeCCCc
Confidence 36889999999 99999 99999999 99999999999999999999999999998 3 68999999 5
Q ss_pred CCHHHHHHHHhcCCCcccccCCc---hhHHHHHhcCcCceeeEEEECCCCcEEEcccchhhhhccccCCCCCHHHHHHHH
Q 013684 288 RDQTSFESYFGTMPWLALPFGDP---TIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLE 364 (438)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~p~~~d---~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~~~~L~ 364 (438)
.+.+.+++++++++ +.+|+..| ....+.+.|++.++|+++|||++|+++.+. .|. .+ .++|.
T Consensus 72 ~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~-------~g~----~~---~~~l~ 136 (154)
T 3ia1_A 72 DTREVVLEYMKTYP-RFIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVALF-------AGR----AG---REALL 136 (154)
T ss_dssp CCHHHHHHHHTTCT-TEEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEEE-------ESB----CC---HHHHH
T ss_pred ccHHHHHHHHHHcC-CCcccccccccchHHHHHHhCCCcccEEEEECCCCCEEEEE-------cCC----CC---HHHHH
Confidence 67889999999998 68888777 889999999999999999999999999874 232 12 35677
Q ss_pred HHHHHHhccCC
Q 013684 365 KQMEEEAKNLP 375 (438)
Q Consensus 365 ~~i~~~~~~~~ 375 (438)
+.|+++....+
T Consensus 137 ~~l~~~~~~~~ 147 (154)
T 3ia1_A 137 DALLLAGADLE 147 (154)
T ss_dssp HHHHHTTCCC-
T ss_pred HHHHhccCccc
Confidence 77776655443
No 49
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.83 E-value=2.7e-20 Score=159.18 Aligned_cols=117 Identities=17% Similarity=0.163 Sum_probs=106.6
Q ss_pred hhcCCCCCcc---CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCC
Q 013684 212 LTNHDRGYLL---GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR 288 (438)
Q Consensus 212 ~g~~~~~f~l---~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~ 288 (438)
+|..+|+|.+ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.+++++++++ +.+++|++|.
T Consensus 3 ~g~~~P~f~~~~~~~~g~-~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~----------~~~~~v~~~~ 71 (148)
T 2b5x_A 3 LRQPMPELTGEKAWLNGE-VTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ----------LNVVAVHMPR 71 (148)
T ss_dssp TTCBCCCCCCCSEEESCC-CCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT----------SEEEEEECCC
T ss_pred CCCCCCCCccccccccCc-ccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC----------cEEEEEEcCC
Confidence 5888999987 57899 99999999999999999999999999999999999998743 8999999875
Q ss_pred -----CHHHHHHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 289 -----DQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 289 -----~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
+.+.+++++++++ +.+|+..|....+.+.|++.++|+++++|++|+++.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 127 (148)
T 2b5x_A 72 SEDDLDPGKIKETAAEHD-ITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQ 127 (148)
T ss_dssp STTTSSHHHHHHHHHHTT-CCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEE
T ss_pred CccccCHHHHHHHHHHcC-CCcceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEe
Confidence 6788999999988 68898888888999999999999999999999999863
No 50
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.83 E-value=4e-20 Score=155.56 Aligned_cols=115 Identities=24% Similarity=0.409 Sum_probs=104.3
Q ss_pred CCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEe-----cCC
Q 013684 215 HDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS-----TDR 288 (438)
Q Consensus 215 ~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is-----~d~ 288 (438)
++|+|.+ +.+|+ .+++++++||+++|+||++||++|+.+.|.+.++++++++ ++.+++|. .+.
T Consensus 1 ~~p~f~l~~~~g~-~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~v~i~~~~~~~~~ 69 (138)
T 4evm_A 1 EVADFELMGVDGK-TYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGD----------DYVVLTVVSPGHKGEQ 69 (138)
T ss_dssp CCCCCEEEBTTSC-EEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT----------TEEEEEEECTTSTTCC
T ss_pred CCCcceeECCCCC-EEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC----------CcEEEEEEcCCCCchh
Confidence 4799999 99999 9999999999999999999999999999999999988543 58999994 456
Q ss_pred CHHHHHHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 289 DQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 289 ~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
+.+.++++++++++..+|+..|....+.+.|++.++|+++|+|++|+++.+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 121 (138)
T 4evm_A 70 SEADFKNWYKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTH 121 (138)
T ss_dssp CHHHHHHHHTTCCCTTCCEEECTTCHHHHHTTCCSSSEEEEECTTCCEEEEE
T ss_pred hHHHHHHHHhhcCCCCeeEEECcchHHHHHcCcccCCeEEEECCCCcEEEee
Confidence 7889999999999769999999889999999999999999999999999874
No 51
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.83 E-value=3e-20 Score=156.34 Aligned_cols=113 Identities=18% Similarity=0.248 Sum_probs=104.7
Q ss_pred hcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHH
Q 013684 213 TNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQT 291 (438)
Q Consensus 213 g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~ 291 (438)
|..+|+|.+ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.+++++++ ++.+++|++|.+.+
T Consensus 2 ~~~~p~~~~~~~~g~-~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-----------~~~~~~v~~~~~~~ 69 (136)
T 1zzo_A 2 VPAQLQFSAKTLDGH-DFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-----------EVTFVGVAGLDQVP 69 (136)
T ss_dssp CCGGGCCEEEBTTSC-EEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEECSSCHH
T ss_pred CCCCCCcccccCCCC-EeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-----------CeEEEEEeCCCCHH
Confidence 456899999 99999 999999999999999999999999999999999998875 48999999999999
Q ss_pred HHHHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEE
Q 013684 292 SFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTV 337 (438)
Q Consensus 292 ~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~ 337 (438)
.+++++++++.-.+|+..|....+.+.|++.++|+++++|++|+++
T Consensus 70 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~i~ 115 (136)
T 1zzo_A 70 AMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD 115 (136)
T ss_dssp HHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCCEE
T ss_pred HHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCCceEEEECCCCCEE
Confidence 9999999988448888888889999999999999999999999998
No 52
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.83 E-value=9.6e-20 Score=158.98 Aligned_cols=119 Identities=18% Similarity=0.370 Sum_probs=102.9
Q ss_pred CCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChh-hhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCC---C
Q 013684 215 HDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIP-CEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR---D 289 (438)
Q Consensus 215 ~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~-C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~---~ 289 (438)
.+|+|++ +.+|+ .+++++++||+++|+||++||++ |+.++|.|.++++++++. ...++++||+|++|. +
T Consensus 2 ~ap~f~l~~~~G~-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~-----~~~~~~~vv~vs~d~~~d~ 75 (164)
T 2ggt_A 2 LGGPFSLTTHTGE-RKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSI-----TTLPDLTPLFISIDPERDT 75 (164)
T ss_dssp CCCCCEEEETTSC-EEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHS-----SSSCCEEEEEEESCTTTCC
T ss_pred CCCCeEEEeCCCC-EEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhc-----cCCCcEEEEEEEeCCCCCC
Confidence 4799999 99999 99999999999999999999998 999999999999999861 001379999999986 3
Q ss_pred HHHHHHHHhcCCCcccccC---CchhHHHHHhcCcCcee---------------eEEEECCCCcEEEcc
Q 013684 290 QTSFESYFGTMPWLALPFG---DPTIKELTKYFDVQGIP---------------CLVIIGPEGKTVTKQ 340 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~p~~---~d~~~~l~~~~~v~~~P---------------~~~lid~~G~i~~~~ 340 (438)
.+.+++|+++++ +.+++. .|....+.+.||+..+| +++|||++|+++.+.
T Consensus 76 ~~~~~~~~~~~~-~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~ 143 (164)
T 2ggt_A 76 KEAIANYVKEFS-PKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYF 143 (164)
T ss_dssp HHHHHHHHHTTC-SSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHHcC-CCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEe
Confidence 678999999877 566665 45667899999999999 899999999999874
No 53
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.83 E-value=6.3e-20 Score=165.92 Aligned_cols=158 Identities=15% Similarity=0.130 Sum_probs=123.7
Q ss_pred hhhcCCCCCcc-CC-CC--CceeeccccCCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEe
Q 013684 211 LLTNHDRGYLL-GH-PP--DEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 285 (438)
Q Consensus 211 ~~g~~~~~f~l-~~-~g--~~~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is 285 (438)
.+|..+|+|++ +. +| + .+++++++||+++|+|| ++||++|..++|.|.+++++|+++ +++||+|+
T Consensus 6 ~~G~~aP~f~l~~~~~g~~~-~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~---------~v~vv~Is 75 (197)
T 1qmv_A 6 RIGKPAPDFKATAVVDGAFK-EVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL---------GCEVLGVS 75 (197)
T ss_dssp CTTSBCCCCEEEEEETTEEE-EEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT---------TEEEEEEE
T ss_pred cCCCCCCCeEeEeecCCCcc-EEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC---------CCEEEEEE
Confidence 46889999999 77 78 8 99999999999999999 999999999999999999999865 79999999
Q ss_pred cCCCHHHHHHHHhcC------CCcccccCCchhHHHHHhcCcC------ceeeEEEECCCCcEEEcccchhhhhccccCC
Q 013684 286 TDRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQGRNLINLYQENAY 353 (438)
Q Consensus 286 ~d~~~~~~~~~~~~~------~~~~~p~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~ 353 (438)
+|. .+..++|++++ ..+.||+..|...++++.|++. .+|+++|||++|+++++.. |....
T Consensus 76 ~d~-~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~-------g~~~~ 147 (197)
T 1qmv_A 76 VDS-QFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITV-------NDLPV 147 (197)
T ss_dssp SSC-HHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEE-------ECTTB
T ss_pred CCC-HHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCCCCceeeEEEEECCCCcEEEEEe-------CCCCC
Confidence 985 56677788765 1478899889889999999998 8999999999999998742 32111
Q ss_pred CCCHHHHHHHHHHHHHHhccCCCcccccccccccccccccCCCC
Q 013684 354 PFTEAKLEFLEKQMEEEAKNLPRSEFHIGHRHELNLVSEGTGGG 397 (438)
Q Consensus 354 ~~~~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (438)
...++++.+.|+++... .+.+..+++.|..|..
T Consensus 148 ---~~~~~e~l~~l~~l~~~--------~~~~~~cp~~w~~g~~ 180 (197)
T 1qmv_A 148 ---GRSVDEALRLVQAFQYT--------DEHGEVCPAGWKPGSD 180 (197)
T ss_dssp ---CCCHHHHHHHHHHHHHH--------HHHCCBBCTTCCTTSC
T ss_pred ---CCCHHHHHHHHHhcchh--------hccCCccCCCcCcCCc
Confidence 12345566666554321 1234556666655544
No 54
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.83 E-value=4.4e-20 Score=170.00 Aligned_cols=119 Identities=18% Similarity=0.216 Sum_probs=107.3
Q ss_pred hhhcCCCCCcc-CC--CC--Cceeecccc-CCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEE
Q 013684 211 LLTNHDRGYLL-GH--PP--DEKVPVSSL-VGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVF 283 (438)
Q Consensus 211 ~~g~~~~~f~l-~~--~g--~~~~~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~ 283 (438)
.+|..+|+|++ +. +| + .++++++ +||++||+|| ++|||+|..++|.|.+++++|+++ +++||+
T Consensus 26 ~~G~~aP~F~l~~~~~~G~~~-~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~---------~v~vv~ 95 (221)
T 2c0d_A 26 LVTKKAYNFTAQGLNKNNEII-NVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK---------NVELLG 95 (221)
T ss_dssp CTTSBCCCCEEEEECTTSCEE-EEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT---------TEEEEE
T ss_pred CCCCCCCCeEEeccccCCCcc-EEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC---------CCEEEE
Confidence 47899999999 87 89 8 9999999 9999999999 999999999999999999999876 799999
Q ss_pred EecCCCHHHHHHHHhcCC------CcccccCCchhHHHHHhcCc-----CceeeEEEECCCCcEEEcc
Q 013684 284 VSTDRDQTSFESYFGTMP------WLALPFGDPTIKELTKYFDV-----QGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 284 is~d~~~~~~~~~~~~~~------~~~~p~~~d~~~~l~~~~~v-----~~~P~~~lid~~G~i~~~~ 340 (438)
|++| +.+..++|++++. .+.||+..|....+++.||+ ..+|++||||++|+|+++.
T Consensus 96 Is~D-~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~ 162 (221)
T 2c0d_A 96 ISVD-SVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQT 162 (221)
T ss_dssp EESS-CHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEE
T ss_pred EeCC-CHHHHHHHHHHhhhhcCccCCceEEEECCchHHHHHcCCcccCCCccceEEEECCCCeEEEEE
Confidence 9997 5567888888761 47889988988999999999 4799999999999999984
No 55
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.82 E-value=3.2e-20 Score=167.07 Aligned_cols=139 Identities=15% Similarity=0.179 Sum_probs=117.3
Q ss_pred hhcCCCCCcc-CC--CC--Cceeecccc-CCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEE
Q 013684 212 LTNHDRGYLL-GH--PP--DEKVPVSSL-VGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 284 (438)
Q Consensus 212 ~g~~~~~f~l-~~--~g--~~~~~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~i 284 (438)
+|..+|+|++ +. +| + .++++++ +||+++|+|| ++||++|..++|.|.+++++|+++ +++||+|
T Consensus 2 ~G~~aP~f~l~~~~~~G~~~-~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~---------~v~vv~I 71 (192)
T 2h01_A 2 FQGQAPSFKAEAVFGDNTFG-EVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKER---------NVELLGC 71 (192)
T ss_dssp CSSBCCCCEEEEECTTSCEE-EEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHT---------TEEEEEE
T ss_pred CCCcCCCcEeEeeecCCcee-EEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC---------CCEEEEE
Confidence 5889999999 87 89 8 9999999 9999999999 999999999999999999999865 7999999
Q ss_pred ecCCCHHHHHHHHhcCC------CcccccCCchhHHHHHhcCcC-----ceeeEEEECCCCcEEEcccchhhhhccccCC
Q 013684 285 STDRDQTSFESYFGTMP------WLALPFGDPTIKELTKYFDVQ-----GIPCLVIIGPEGKTVTKQGRNLINLYQENAY 353 (438)
Q Consensus 285 s~d~~~~~~~~~~~~~~------~~~~p~~~d~~~~l~~~~~v~-----~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~ 353 (438)
++| +.+..++|.+.+. .+.+|+..|...++.+.||+. .+|+++|||++|+++++.. |...
T Consensus 72 s~d-~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~~~-------g~~~- 142 (192)
T 2h01_A 72 SVD-SKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFNESVALRAFVLIDKQGVVQHLLV-------NNLA- 142 (192)
T ss_dssp ESS-CHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECCEEEEECTTSBEEEEEE-------GGGS-
T ss_pred EeC-CHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcCcCCceeeEEEEEcCCCEEEEEEe-------CCCC-
Confidence 998 5678888888772 478899999889999999999 8999999999999998742 2111
Q ss_pred CCCHHHHHHHHHHHHHHh
Q 013684 354 PFTEAKLEFLEKQMEEEA 371 (438)
Q Consensus 354 ~~~~~~~~~L~~~i~~~~ 371 (438)
.....+++.+.|+++.
T Consensus 143 --~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 143 --LGRSVDEILRLIDALQ 158 (192)
T ss_dssp --SGGGHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHh
Confidence 2234566666666544
No 56
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.82 E-value=4.9e-20 Score=172.00 Aligned_cols=119 Identities=8% Similarity=0.100 Sum_probs=100.1
Q ss_pred HhhccchhHHHHHhhcccccCC-CCC--EEeccc-cCCCEEEEEEe-ccCCccch-hhHHHHHHHHHHHhcCCCCE-EEE
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKE-IGE--EVKVSD-LEGKVTALYFS-ANWYPPCG-NFTGVLVDVYEELRNNGSDF-EVV 110 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~-~g~--~v~l~~-~~gk~vll~F~-a~wC~~C~-~~~p~l~~l~~~~~~~~~~~-~iv 110 (438)
.+|..+|+|+ +.+. +|+ .++|++ ++||+++|+|| ++|||+|+ .++|.|+++++++++.| + +|+
T Consensus 4 ~~G~~aP~f~--------l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~--~~~vv 73 (241)
T 1nm3_A 4 MEGKKVPQVT--------FRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYG--VDDIL 73 (241)
T ss_dssp CTTSBCCCCE--------EEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTT--CCEEE
T ss_pred cCCCCCCCeE--------EEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEE
Confidence 4799999999 8886 777 899999 89999999999 99999999 99999999999999876 9 999
Q ss_pred EEecCCCHHHHHHhHhcCCccccc-CCChHHHHHHhhhcCcC-----------ccceEEEecCCCCCCCcccccc
Q 013684 111 FVSSDEDLNAFNNYRACMPWLAVP-YSDLETKKALNRKFDIE-----------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 111 ~vs~D~~~~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~v~-----------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+||.|. .+..++|.++.++..++ ..|.+ ..+++.|++. ..|+++|| + +|++++...
T Consensus 74 ~is~d~-~~~~~~~~~~~~~~~~~~l~D~~--~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~---~G~i~~~~~ 141 (241)
T 1nm3_A 74 VVSVND-TFVMNAWKEDEKSENISFIPDGN--GEFTEGMGMLVGKEDLGFGKRSWRYSMLV-K---NGVVEKMFI 141 (241)
T ss_dssp EEESSC-HHHHHHHHHHTTCTTSEEEECTT--SHHHHHTTCEEECTTTTCCEEECCEEEEE-E---TTEEEEEEE
T ss_pred EEEcCC-HHHHHHHHHhcCCCceEEEECCC--cHHHHHhCceeecccccCcccceeEEEEE-E---CCEEEEEEE
Confidence 999984 67788888877654223 23443 6889999986 45899999 9 999987754
No 57
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.82 E-value=3.1e-20 Score=163.89 Aligned_cols=141 Identities=16% Similarity=0.258 Sum_probs=113.0
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCCh-hhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC-
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCI-PCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD- 287 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~-~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d- 287 (438)
.+|..+|+|++ +.+|+ .+++++++||+++|+||++||+ +|..++|.|.+++++|+++ +.+++||+|++|
T Consensus 8 ~~g~~~p~f~l~~~~G~-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~-------~~~~~vv~is~d~ 79 (174)
T 1xzo_A 8 PLNYEVEPFTFQNQDGK-NVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAE-------NIDVRIISFSVDP 79 (174)
T ss_dssp CCCEECCCCEEECTTSC-EEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHT-------TCCCEEEEEESCT
T ss_pred ccccccCCcEEEcCCCC-EEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhc-------CCcEEEEEEEeCC
Confidence 36889999999 99999 9999999999999999999999 9999999999999999876 235999999998
Q ss_pred --CCHHHHHHHHhcCCCccc---ccCCchhHHHHHhc----------------CcCceeeEEEECCCCcEEEcccchhhh
Q 013684 288 --RDQTSFESYFGTMPWLAL---PFGDPTIKELTKYF----------------DVQGIPCLVIIGPEGKTVTKQGRNLIN 346 (438)
Q Consensus 288 --~~~~~~~~~~~~~~~~~~---p~~~d~~~~l~~~~----------------~v~~~P~~~lid~~G~i~~~~~~~~~~ 346 (438)
.+.+.+++|+++++ +.+ ++..|.+..+.+.| ++..+|+++|||++|+++.+.
T Consensus 80 ~~d~~~~~~~~~~~~~-~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~------ 152 (174)
T 1xzo_A 80 ENDKPKQLKKFAANYP-LSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDY------ 152 (174)
T ss_dssp TTCCHHHHHHHHTTSC-CCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEE------
T ss_pred CCCCHHHHHHHHHHcC-CCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEE------
Confidence 46788999999887 556 66666555544443 567899999999999999874
Q ss_pred hccccCCCCCHHHHHHHHHHHHHHhc
Q 013684 347 LYQENAYPFTEAKLEFLEKQMEEEAK 372 (438)
Q Consensus 347 ~~g~~~~~~~~~~~~~L~~~i~~~~~ 372 (438)
.|... ...++|.+.|+++++
T Consensus 153 -~g~~~-----~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 153 -NGVEN-----TPYDDIISDVKSAST 172 (174)
T ss_dssp -ESSSS-----CCHHHHHHHHHHHTC
T ss_pred -cCCCC-----CCHHHHHHHHHHHHh
Confidence 23211 123566666766654
No 58
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.82 E-value=1.4e-20 Score=168.82 Aligned_cols=138 Identities=13% Similarity=0.135 Sum_probs=107.9
Q ss_pred hhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC---
Q 013684 212 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD--- 287 (438)
Q Consensus 212 ~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d--- 287 (438)
.+..+|+|++ +.+|+ .+++++++||++||+||++|||+|+.++|.|.+++++|+++ +++||+|++|
T Consensus 22 ~~~~~p~f~l~d~~G~-~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~---------~~~vi~is~d~~~ 91 (187)
T 3dwv_A 22 AASSIFDFEVLDADHK-PYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ---------GFTVLAFPSNQFG 91 (187)
T ss_dssp TCCSGGGSCCBBTTSC-BCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG---------TCEEEEEEBCCCS
T ss_pred CCCccCCeEEEcCCCC-EeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC---------CeEEEEEECcccC
Confidence 3668899999 99999 99999999999999999999999999999999999999876 7999999998
Q ss_pred ----CCHHHHHHHHhcCCCcccccCC--chhHH----HH--------HhcCcCcee---eEEEECCCCcEEEcccchhhh
Q 013684 288 ----RDQTSFESYFGTMPWLALPFGD--PTIKE----LT--------KYFDVQGIP---CLVIIGPEGKTVTKQGRNLIN 346 (438)
Q Consensus 288 ----~~~~~~~~~~~~~~~~~~p~~~--d~~~~----l~--------~~~~v~~~P---~~~lid~~G~i~~~~~~~~~~ 346 (438)
.+.+.+++|+++.-.+.+|+.. |.... +. ..|++..+| ++||||++|+++.+..
T Consensus 92 ~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~----- 166 (187)
T 3dwv_A 92 GQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFS----- 166 (187)
T ss_dssp SCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEEC-----
T ss_pred CCCCCCHHHHHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEEC-----
Confidence 3567899999854237777764 22221 22 445777888 9999999999998742
Q ss_pred hccccCCCCCHHHHHHHHHHHHHHhcc
Q 013684 347 LYQENAYPFTEAKLEFLEKQMEEEAKN 373 (438)
Q Consensus 347 ~~g~~~~~~~~~~~~~L~~~i~~~~~~ 373 (438)
|. .++ ++|.+.|++++++
T Consensus 167 --g~----~~~---~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 167 --PG----ASV---KDIEEKLIPLLGS 184 (187)
T ss_dssp --TT----CCH---HHHHHHHHHHC--
T ss_pred --CC----CCH---HHHHHHHHHHHhc
Confidence 21 122 4566667666553
No 59
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.82 E-value=6.2e-20 Score=164.43 Aligned_cols=119 Identities=19% Similarity=0.252 Sum_probs=106.5
Q ss_pred hhcCCCCCcc-CCCCC---ceeeccccCCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEec
Q 013684 212 LTNHDRGYLL-GHPPD---EKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 286 (438)
Q Consensus 212 ~g~~~~~f~l-~~~g~---~~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~ 286 (438)
+|..+|+|++ +.+|+ +.+++++++||+++|+|| ++||++|+.++|.|.+++++|+++ +++|++|++
T Consensus 3 ~G~~~P~f~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~---------~v~vv~vs~ 73 (187)
T 1we0_A 3 IGTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL---------GVEVYSVST 73 (187)
T ss_dssp TTCBCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT---------TEEEEEEES
T ss_pred CCCcCCCeEEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc---------CCEEEEEEC
Confidence 5889999999 77765 279999999999999999 999999999999999999999875 799999999
Q ss_pred CCCHHHHHHHHhcCC---CcccccCCchhHHHHHhcCcC------ceeeEEEECCCCcEEEcc
Q 013684 287 DRDQTSFESYFGTMP---WLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 287 d~~~~~~~~~~~~~~---~~~~p~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~ 340 (438)
|. .+..++|.++++ .+.+|+..|....+++.|++. ++|+++|||++|+++++.
T Consensus 74 d~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~ 135 (187)
T 1we0_A 74 DT-HFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGVIQAIE 135 (187)
T ss_dssp SC-HHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred CC-HHHHHHHHHHhccccCCCceEEECCchHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEE
Confidence 85 677888888872 378888888889999999998 999999999999999884
No 60
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.82 E-value=3.1e-20 Score=156.59 Aligned_cols=110 Identities=18% Similarity=0.257 Sum_probs=103.0
Q ss_pred CCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHH
Q 013684 215 HDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSF 293 (438)
Q Consensus 215 ~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~ 293 (438)
.+|+|++ +.+|+ .+++++++||+++|+||++||++|+.+.|.+.+++++++ ++.+++|++|.+.+.+
T Consensus 3 ~~p~~~l~~~~g~-~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-----------~~~~~~v~~~~~~~~~ 70 (136)
T 1lu4_A 3 ERLQFTATTLSGA-PFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-----------AVTFVGIATRADVGAM 70 (136)
T ss_dssp GGGCCEEEBTTSC-EEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEECSSCHHHH
T ss_pred CCCCeEeecCCCC-eecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-----------CcEEEEEEcCCCHHHH
Confidence 5789999 99999 999999999999999999999999999999999998875 4899999999889999
Q ss_pred HHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEE
Q 013684 294 ESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTV 337 (438)
Q Consensus 294 ~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~ 337 (438)
++++++++ +.+|+..|....+.+.|++.++|+++++|++|+++
T Consensus 71 ~~~~~~~~-~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~ 113 (136)
T 1lu4_A 71 QSFVSKYN-LNFTNLNDADGVIWARYNVPWQPAFVFYRADGTST 113 (136)
T ss_dssp HHHHHHHT-CCSEEEECTTSHHHHHTTCCSSSEEEEECTTSCEE
T ss_pred HHHHHHcC-CCceEEECCchhHHHhcCCCCCCEEEEECCCCcEE
Confidence 99999888 58888888889999999999999999999999998
No 61
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.82 E-value=6e-20 Score=167.97 Aligned_cols=119 Identities=15% Similarity=0.176 Sum_probs=105.8
Q ss_pred hhhcCCCCCcc-CC---CCCceeeccccCCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEe
Q 013684 211 LLTNHDRGYLL-GH---PPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 285 (438)
Q Consensus 211 ~~g~~~~~f~l-~~---~g~~~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is 285 (438)
.+|..+|+|++ +. +|+ .+++++++||+++|+|| ++||++|..++|.|.+++++|+++ +++||+|+
T Consensus 20 ~~G~~aP~f~l~~~~~~~g~-~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~---------~v~vv~Is 89 (211)
T 2pn8_A 20 FQSMPAPYWEGTAVIDGEFK-ELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI---------NTEVVACS 89 (211)
T ss_dssp CSSCBCCCCEEEEEETTEEE-EEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT---------TEEEEEEE
T ss_pred CCCCcCCCeEeecccCCCCc-EEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC---------CCEEEEEE
Confidence 46889999999 64 467 99999999999999999 999999999999999999999865 89999999
Q ss_pred cCCCHHHHHHHHhcC----C--CcccccCCchhHHHHHhcCcC------ceeeEEEECCCCcEEEcc
Q 013684 286 TDRDQTSFESYFGTM----P--WLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 286 ~d~~~~~~~~~~~~~----~--~~~~p~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~ 340 (438)
+| +.+..++|++.+ + .+.||+..|....+++.||+. .+|++||||++|+|++..
T Consensus 90 ~D-~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~ 155 (211)
T 2pn8_A 90 VD-SQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQIT 155 (211)
T ss_dssp SS-CHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred CC-CHHHHHHHHHHhhhccCccCCceEEEECCchHHHHHcCCcccCCCcccceEEEECCCCEEEEEE
Confidence 98 566788888876 1 478999889889999999994 699999999999999874
No 62
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.82 E-value=2.5e-20 Score=163.28 Aligned_cols=115 Identities=10% Similarity=0.068 Sum_probs=103.6
Q ss_pred hhcCCCCCcc-CCCCCceeeccccCCCEEEEEEec-CCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 212 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSA-RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 212 ~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
+|..+|+|++ +.+|+ .+++++++||+++|+||+ +||++|..++|.|++++++| + +++||+|+.| +
T Consensus 18 ~G~~~P~f~l~~~~G~-~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~---------~v~vv~is~d-~ 84 (163)
T 1psq_A 18 VGDKALDFSLTTTDLS-KKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--D---------NTVVLTVSMD-L 84 (163)
T ss_dssp TTSBCCCCEEECTTSC-EEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--T---------TEEEEEEESS-C
T ss_pred CCCCCCCEEEEcCCCc-EeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--C---------CcEEEEEECC-C
Confidence 6889999999 99999 999999999999999995 99999999999999999888 3 6999999998 4
Q ss_pred HHHHHHHHhcCCCc-ccccCCc-hhHHHHHhcCcC----c--eeeEEEECCCCcEEEcc
Q 013684 290 QTSFESYFGTMPWL-ALPFGDP-TIKELTKYFDVQ----G--IPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 290 ~~~~~~~~~~~~~~-~~p~~~d-~~~~l~~~~~v~----~--~P~~~lid~~G~i~~~~ 340 (438)
.+..++|.++++ + .+|+..| ....+.+.||+. + .|+++|||++|+|+++.
T Consensus 85 ~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~ 142 (163)
T 1psq_A 85 PFAQKRWCGAEG-LDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVE 142 (163)
T ss_dssp HHHHHHHHHHHT-CTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEE
T ss_pred HHHHHHHHHhcC-CCCcEEecCCchhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEE
Confidence 677888888877 5 7898888 788999999997 4 49999999999999884
No 63
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.82 E-value=2.3e-19 Score=165.94 Aligned_cols=176 Identities=14% Similarity=0.158 Sum_probs=116.2
Q ss_pred cCCCEEEEEE----eccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHH
Q 013684 69 LEGKVTALYF----SANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKAL 144 (438)
Q Consensus 69 ~~gk~vll~F----~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l 144 (438)
.++.+++++| |++||++|+.+.|.+.++++++.+.+ ++.++.|+.|.. .++
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~-~v~~~~vd~~~~------------------------~~l 73 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQD-KIKLDIYSPFTH------------------------KEE 73 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTT-TEEEEEECTTTC------------------------HHH
T ss_pred ccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCC-ceEEEEecCccc------------------------HHH
Confidence 4445666666 58999999999999999999886532 488877765543 789
Q ss_pred hhhcCcCccceEEEecCCCCCCCcccccchhHHhhhCCCCccCChhHHHHHHHHHHhhhhHHHHHhhhhcCCCCCccCCC
Q 013684 145 NRKFDIEGIPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRGYLLGHP 224 (438)
Q Consensus 145 ~~~~~v~~~P~~~lvd~~~~~G~v~~~~~~~~i~~~~~~a~p~~~e~l~~L~~~~~~~~~~~~~~~~~g~~~~~f~l~~~ 224 (438)
++.|+|+++||+++++ +|....+.. |. +...+....+...... +.... ..+
T Consensus 74 ~~~~~v~~~Ptl~~~~----~~~~~~~~~-------G~---~~~~~l~~~~~~~~~~-----------~~~~~----~l~ 124 (229)
T 2ywm_A 74 TEKYGVDRVPTIVIEG----DKDYGIRYI-------GL---PAGLEFTTLINGIFHV-----------SQRKP----QLS 124 (229)
T ss_dssp HHHTTCCBSSEEEEES----SSCCCEEEE-------SC---CCTTHHHHHHHHHHHH-----------HTTCC----SCC
T ss_pred HHHcCCCcCcEEEEEC----CCcccceec-------CC---ccHHHHHHHHHHHHhc-----------cCCcc----CCC
Confidence 9999999999999996 333222111 11 1111111111111100 00111 111
Q ss_pred CCceee-ccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCc
Q 013684 225 PDEKVP-VSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWL 303 (438)
Q Consensus 225 g~~~~~-l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~ 303 (438)
.. .+. +....+++++++||++||++|+.+.|.+.++++++. ++.++.|+++..
T Consensus 125 ~~-~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~-----------~v~~~~vd~~~~-------------- 178 (229)
T 2ywm_A 125 EK-TLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND-----------YITSKVIDASEN-------------- 178 (229)
T ss_dssp HH-HHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT-----------TEEEEEEEGGGC--------------
T ss_pred HH-HHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC-----------CeEEEEEECCCC--------------
Confidence 11 111 112335567899999999999999999999988762 488888888754
Q ss_pred ccccCCchhHHHHHhcCcCceeeEEEECCCCcE
Q 013684 304 ALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 336 (438)
Q Consensus 304 ~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i 336 (438)
.++++.|+|.++||+++ +|++
T Consensus 179 ---------~~l~~~~~v~~~Pt~~~---~G~~ 199 (229)
T 2ywm_A 179 ---------QDLAEQFQVVGVPKIVI---NKGV 199 (229)
T ss_dssp ---------HHHHHHTTCCSSSEEEE---GGGT
T ss_pred ---------HHHHHHcCCcccCEEEE---CCEE
Confidence 67899999999999988 6774
No 64
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.82 E-value=3.2e-20 Score=161.50 Aligned_cols=116 Identities=17% Similarity=0.347 Sum_probs=105.4
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
.+|..+|+|.+ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.++++++++. ++.+++|++|.
T Consensus 16 ~~G~~~p~f~l~~~~g~-~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~---------~~~~v~v~~d~- 84 (158)
T 3hdc_A 16 RTGALAPNFKLPTLSGE-NKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG---------DLVVLAVNVEK- 84 (158)
T ss_dssp CTTSBCCCCEEECTTSC-EEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT---------SEEEEEEECSS-
T ss_pred CCCCcCCCceeEcCCCC-EEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccC---------CeEEEEEeCCH-
Confidence 36889999999 99999 99999999999999999999999999999999999999754 79999999986
Q ss_pred HHHHHHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 290 QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
.+++++++++ +.+|+..|....+.+.|++.++|+++|||++|+++.+.
T Consensus 85 --~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 132 (158)
T 3hdc_A 85 --RFPEKYRRAP-VSFNFLSDATGQVQQRYGANRLPDTFIVDRKGIIRQRV 132 (158)
T ss_dssp --SCCGGGGGCC-CSCEEEECTTSHHHHHTTCCSSSEEEEECTTSBEEEEE
T ss_pred --HHHHHHHHcC-CCceEEECchHHHHHHhCCCCcceEEEEcCCCCEEEEE
Confidence 3566777776 67888888889999999999999999999999999874
No 65
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.82 E-value=6.2e-20 Score=168.14 Aligned_cols=119 Identities=15% Similarity=0.166 Sum_probs=108.6
Q ss_pred hhhcCCCCCcc-CC--CC--Cceeecccc-CCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEE
Q 013684 211 LLTNHDRGYLL-GH--PP--DEKVPVSSL-VGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVF 283 (438)
Q Consensus 211 ~~g~~~~~f~l-~~--~g--~~~~~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~ 283 (438)
.+|..+|+|++ +. +| + .++++++ +||+++|+|| ++||++|+.++|.|.+++++|+++ +++||+
T Consensus 22 ~~G~~aP~f~l~~~~~~G~~~-~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~---------~v~vv~ 91 (213)
T 2i81_A 22 YVGKEAPFFKAEAVFGDNSFG-EVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHER---------NVELLG 91 (213)
T ss_dssp CBTSBCCCCEEEEECTTSCEE-EEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHT---------TEEEEE
T ss_pred cCCCcCCCeEeeccccCCcee-EEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHC---------CCEEEE
Confidence 47899999999 87 89 8 9999999 9999999999 999999999999999999999865 799999
Q ss_pred EecCCCHHHHHHHHhcCC------CcccccCCchhHHHHHhcCcC-----ceeeEEEECCCCcEEEcc
Q 013684 284 VSTDRDQTSFESYFGTMP------WLALPFGDPTIKELTKYFDVQ-----GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 284 is~d~~~~~~~~~~~~~~------~~~~p~~~d~~~~l~~~~~v~-----~~P~~~lid~~G~i~~~~ 340 (438)
|++| +.+..++|++++. .+.||+..|...++++.||+. .+|++||||++|+|+++.
T Consensus 92 Is~D-~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~~ 158 (213)
T 2i81_A 92 CSVD-SKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLL 158 (213)
T ss_dssp EESS-CHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEE
T ss_pred EeCC-CHHHHHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCccccCCcccEEEEECCCCEEEEEE
Confidence 9998 5677888888761 478999999889999999999 999999999999999884
No 66
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.82 E-value=2.2e-20 Score=202.98 Aligned_cols=175 Identities=15% Similarity=0.221 Sum_probs=123.7
Q ss_pred cccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhh
Q 013684 67 SDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 146 (438)
Q Consensus 67 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 146 (438)
.++.|++++|+|||+||++|+.+.|.|.++++++++ ++.++.|+.+.. ..+++
T Consensus 451 ~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~---~v~~~~vd~~~~------------------------~~~~~ 503 (780)
T 3apo_A 451 PASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYG---QLKVGTLDCTIH------------------------EGLCN 503 (780)
T ss_dssp CTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTC------------------------HHHHH
T ss_pred HHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CeEEEEEeCCCC------------------------HHHHH
Confidence 344789999999999999999999999999999864 388888876643 56889
Q ss_pred hcCcCccceEEEecCCCCCCCcccccchhHHhhhCCCCccCChhHHHHHHHHHHhhhhHHHHHhhhhcCCCCCccCCCCC
Q 013684 147 KFDIEGIPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRGYLLGHPPD 226 (438)
Q Consensus 147 ~~~v~~~P~~~lvd~~~~~G~v~~~~~~~~i~~~~~~a~p~~~e~l~~L~~~~~~~~~~~~~~~~~g~~~~~f~l~~~g~ 226 (438)
.|+|.++|++++++ +|.+. ... |. .+.+.+..+...... |... ..+++
T Consensus 504 ~~~v~~~Pt~~~~~----~g~~~-~~~-------g~----~~~~~l~~fi~~~~~---------------~~v~-~l~~~ 551 (780)
T 3apo_A 504 MYNIQAYPTTVVFN----QSSIH-EYE-------GH----HSAEQILEFIEDLRN---------------PSVV-SLTPS 551 (780)
T ss_dssp HTTCCSSSEEEEEE----TTEEE-EEC-------SC----SCHHHHHHHHHHHHS---------------CSEE-ECCHH
T ss_pred HcCCCcCCeEEEEc----CCcee-eec-------Cc----ccHHHHHHHHHhhcc---------------ccee-ecCcc
Confidence 99999999999995 66542 110 11 222333322221111 1111 11111
Q ss_pred cee---eccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCc
Q 013684 227 EKV---PVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWL 303 (438)
Q Consensus 227 ~~~---~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~ 303 (438)
.+ -...-+++.++|.||++||++|+.+.|.+.++++.++++ +.++.|+++..
T Consensus 552 -~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~----------v~~~~vd~~~~-------------- 606 (780)
T 3apo_A 552 -TFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGL----------INVGSVDCGQY-------------- 606 (780)
T ss_dssp -HHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT----------SEEEEEETTTT--------------
T ss_pred -cHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCC----------eEEEEEECcch--------------
Confidence 11 111122467999999999999999999999999999754 67777776643
Q ss_pred ccccCCchhHHHHHhcCcCceeeEEEECCCC
Q 013684 304 ALPFGDPTIKELTKYFDVQGIPCLVIIGPEG 334 (438)
Q Consensus 304 ~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G 334 (438)
..+++.|+|+++|+++++..++
T Consensus 607 ---------~~l~~~~~v~~~Pti~~~~~~~ 628 (780)
T 3apo_A 607 ---------HSFCTQENVQRYPEIRFYPQKS 628 (780)
T ss_dssp ---------HHHHHHTTCCSSSEEEEECCCS
T ss_pred ---------HHHHHHcCCCCCCeEEEEcCCC
Confidence 5688999999999999996544
No 67
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.82 E-value=3.7e-20 Score=159.59 Aligned_cols=122 Identities=16% Similarity=0.240 Sum_probs=106.6
Q ss_pred HHhhccchhHHHHHhhcccccCCCCCEEecc--ccCCCEEEEEEeccCCcc--chhhHHHHHHHHHHH-hcCCCCEEEEE
Q 013684 37 FLIMSLSQWYVQQLRRRMTSTKEIGEEVKVS--DLEGKVTALYFSANWYPP--CGNFTGVLVDVYEEL-RNNGSDFEVVF 111 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~--~~~gk~vll~F~a~wC~~--C~~~~p~l~~l~~~~-~~~~~~~~iv~ 111 (438)
+.+|.++|+|+ +.+.+|+.++++ +++||+++|+||++||++ |+.++|.|.++++++ ++.+ +++++
T Consensus 5 l~~G~~~p~f~--------l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~--~~~v~ 74 (150)
T 3fw2_A 5 SEIGKYAPFFS--------LPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKY--IGMLG 74 (150)
T ss_dssp TSTTSBCCCCC--------EEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSS--EEEEE
T ss_pred ccCCCcCCccE--------eECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCC--eEEEE
Confidence 35799999999 999999999999 999999999999999999 999999999999999 6654 99999
Q ss_pred EecCCCHHHHHHhHhcCC--cccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCccccc
Q 013684 112 VSSDEDLNAFNNYRACMP--WLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 112 vs~D~~~~~~~~~~~~~~--~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
|++|.+.+.+++++++++ |..+... ......+.+.|++.++|+++|||+ +|+++.+.
T Consensus 75 v~~d~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~ 133 (150)
T 3fw2_A 75 ISLDVDKQQWKDAIKRDTLDWEQVCDF-GGLNSEVAKQYSIYKIPANILLSS---DGKILAKN 133 (150)
T ss_dssp EECCSCHHHHHHHHHHTTCCSEEECCS-CGGGCHHHHHTTCCSSSEEEEECT---TSBEEEES
T ss_pred EEcCCCHHHHHHHHHHhCCCceEEEcC-cccchHHHHHcCCCccCeEEEECC---CCEEEEcc
Confidence 999999999999998665 4443321 111268999999999999999999 99998775
No 68
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.82 E-value=2.3e-20 Score=166.51 Aligned_cols=119 Identities=13% Similarity=0.140 Sum_probs=98.9
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCC-
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR- 288 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~- 288 (438)
.+|..+|+|++ +.+|+ .+++++++||++||+||++|||+|+.++|.|.+++++|+++ +++||+|++|.
T Consensus 24 ~~g~~~p~f~l~~~~G~-~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~---------~v~vv~vs~d~~ 93 (181)
T 2p31_A 24 QQEQDFYDFKAVNIRGK-LVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH---------HFNVLAFPCNQF 93 (181)
T ss_dssp ---CCGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCCS
T ss_pred CcCCccCceEeecCCCC-EecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC---------CEEEEEEECcCC
Confidence 36889999999 99999 99999999999999999999999999999999999999876 79999999974
Q ss_pred ------CHHHHHHHHhc-CCCcccccCC--chhHHHHH---hcCcCcee-------eEEEECCCCcEEEcc
Q 013684 289 ------DQTSFESYFGT-MPWLALPFGD--PTIKELTK---YFDVQGIP-------CLVIIGPEGKTVTKQ 340 (438)
Q Consensus 289 ------~~~~~~~~~~~-~~~~~~p~~~--d~~~~l~~---~~~v~~~P-------~~~lid~~G~i~~~~ 340 (438)
+.+.+++|+++ ++ +.+|+.. |.+..... .|++.++| ++||||++|+++.+.
T Consensus 94 ~~~e~~~~~~~~~~~~~~~~-~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~ 163 (181)
T 2p31_A 94 GQQEPDSNKEIESFARRTYS-VSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAW 163 (181)
T ss_dssp TTCCCSCHHHHHHHHHHHHC-CCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEE
T ss_pred CCCCCCCHHHHHHHHHhhcC-CCceeEeecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEe
Confidence 67788999987 66 6788764 22222111 35678889 999999999999874
No 69
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.82 E-value=4.6e-20 Score=170.10 Aligned_cols=120 Identities=18% Similarity=0.223 Sum_probs=105.7
Q ss_pred hhhhcCCCCCcc-CC-CC--CceeeccccCCCEEEEEEec-CCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEE
Q 013684 210 NLLTNHDRGYLL-GH-PP--DEKVPVSSLVGKTVGLYFSA-RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 284 (438)
Q Consensus 210 ~~~g~~~~~f~l-~~-~g--~~~~~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~i 284 (438)
-.+|..+|+|++ +. +| + .+++++++||++||+||+ +||++|..++|.|++++++|+++ +++||+|
T Consensus 40 l~~G~~aP~f~l~~~~d~~G~-~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~---------~v~vv~I 109 (222)
T 3ztl_A 40 LLPNRPAPEFKGQAVINGEFK-EICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR---------NCQVIAC 109 (222)
T ss_dssp CCSSEECCCCEEEEEETTEEE-EEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT---------TEEEEEE
T ss_pred ccCCCCCCCeEEecccCCCCc-EEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC---------CCEEEEE
Confidence 457999999999 65 55 8 999999999999999996 99999999999999999999865 7999999
Q ss_pred ecCCCHHHHHHHHhcC------CCcccccCCchhHHHHHhcCcC------ceeeEEEECCCCcEEEcc
Q 013684 285 STDRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 285 s~d~~~~~~~~~~~~~------~~~~~p~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~ 340 (438)
++|. .+..+++.+.+ ..+.||+..|....+.+.|++. .+|++||||++|+|+++.
T Consensus 110 s~D~-~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~~~~ 176 (222)
T 3ztl_A 110 STDS-QYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQIT 176 (222)
T ss_dssp ESSC-HHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEEEEEE
T ss_pred ECCC-HHHHHHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecCCCCccceEEEECCCCeEEEEE
Confidence 9984 55566676654 2488999999889999999998 899999999999999884
No 70
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.82 E-value=2.9e-20 Score=160.96 Aligned_cols=121 Identities=16% Similarity=0.270 Sum_probs=106.7
Q ss_pred hhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCH
Q 013684 39 IMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDL 118 (438)
Q Consensus 39 ~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~ 118 (438)
.|..+|+|+ +.+.+|+.+++++++||+++|+||++||++|+.++|.|.++++++++.+ +++++|++|...
T Consensus 11 ~g~~~p~f~--------l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~--~~vv~i~~d~~~ 80 (152)
T 2lrt_A 11 KEASIIDIQ--------LKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQG--FEIYQISLDGDE 80 (152)
T ss_dssp CTTCSCCCC--------EEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGT--EEEEEEECSCCH
T ss_pred cCCCCCCeE--------EEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCC--eEEEEEEccCCH
Confidence 578899999 8999999999999999999999999999999999999999999999875 999999999999
Q ss_pred HHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 119 NAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+.++++...++|..+...+.. ...+.+.|++.++|+++|||+ +|+++.+..
T Consensus 81 ~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~v~~~P~~~lid~---~G~i~~~~~ 131 (152)
T 2lrt_A 81 HFWKTSADNLPWVCVRDANGA-YSSYISLYNVTNLPSVFLVNR---NNELSARGE 131 (152)
T ss_dssp HHHHHHHTTCSSEEEECSSGG-GCHHHHHHTCCSCSEEEEEET---TTEEEEETT
T ss_pred HHHHHHHhCCCceEEECCCCc-chHHHHHcCcccCceEEEECC---CCeEEEecC
Confidence 889999888887765432221 135889999999999999999 999987654
No 71
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.81 E-value=6.5e-20 Score=161.04 Aligned_cols=119 Identities=13% Similarity=0.214 Sum_probs=98.3
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC--
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD-- 287 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d-- 287 (438)
.+|..+|+|++ +.+|+ .+++++++||+++|+||++||++|+.++|.|++++++|+++ +++||+|++|
T Consensus 7 ~~g~~~p~f~l~~~~g~-~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~vs~d~~ 76 (170)
T 2p5q_A 7 KNPESVHDFTVKDAKEN-DVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ---------GLEILAFPCNQF 76 (170)
T ss_dssp ---CCGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCTT
T ss_pred CCCccccceEEEcCCCC-EecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC---------CEEEEEEECCCC
Confidence 36888999999 99999 99999999999999999999999999999999999999876 7999999997
Q ss_pred -----CCHHHHHHHHh-cCCCcccccC--CchhHH----HH-----HhcCc--Ccee---eEEEECCCCcEEEcc
Q 013684 288 -----RDQTSFESYFG-TMPWLALPFG--DPTIKE----LT-----KYFDV--QGIP---CLVIIGPEGKTVTKQ 340 (438)
Q Consensus 288 -----~~~~~~~~~~~-~~~~~~~p~~--~d~~~~----l~-----~~~~v--~~~P---~~~lid~~G~i~~~~ 340 (438)
.+.+.+++|++ +++ +.+|+. .|.... +. +.+++ .++| +++|||++|+++.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~ 150 (170)
T 2p5q_A 77 GEEEPGTNDQITDFVCTRFK-SEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRY 150 (170)
T ss_dssp TTCCCSCHHHHHHHHHHHTC-CCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEE
T ss_pred CCCCCCCHHHHHHHHHHhcC-CCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEee
Confidence 36778899988 555 677776 343322 22 23467 7888 999999999999874
No 72
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.81 E-value=1.6e-19 Score=166.25 Aligned_cols=141 Identities=16% Similarity=0.203 Sum_probs=116.0
Q ss_pred hhhcCCCCCcc-C---CCCCceeeccccCCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEe
Q 013684 211 LLTNHDRGYLL-G---HPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 285 (438)
Q Consensus 211 ~~g~~~~~f~l-~---~~g~~~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is 285 (438)
.+|..+|+|++ + .+|+ .+++++++||+++|+|| ++|||+|+.++|.|.+++++|+++ +++||+|+
T Consensus 28 ~~G~~aP~f~l~~~~~~~g~-~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~---------~v~vv~Is 97 (220)
T 1zye_A 28 AVTQHAPYFKGTAVVSGEFK-EISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDV---------NCEVVAVS 97 (220)
T ss_dssp CTTSBCCCCEEEEECSSSEE-EEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHT---------TEEEEEEE
T ss_pred cCCCCCCCcEEEeeeCCCCc-EEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC---------CCEEEEEE
Confidence 47899999998 3 4678 99999999999999999 999999999999999999999876 79999999
Q ss_pred cCCCHHHHHHHHhcC----C--CcccccCCchhHHHHHhcCcC------ceeeEEEECCCCcEEEcccchhhhhccccCC
Q 013684 286 TDRDQTSFESYFGTM----P--WLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQGRNLINLYQENAY 353 (438)
Q Consensus 286 ~d~~~~~~~~~~~~~----~--~~~~p~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~ 353 (438)
+| +.+..++|++.+ + .+.||+..|...++.+.||+. ++|++||||++|+++++. .|....
T Consensus 98 ~D-~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~-------~g~~~~ 169 (220)
T 1zye_A 98 VD-SHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLS-------VNDLPV 169 (220)
T ss_dssp SS-CHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE-------EECTTC
T ss_pred CC-CHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCCCcccceEEEECCCCEEEEEE-------ecCCCC
Confidence 98 556778888765 1 378899999889999999999 999999999999999874 232111
Q ss_pred CCCHHHHHHHHHHHHHHhc
Q 013684 354 PFTEAKLEFLEKQMEEEAK 372 (438)
Q Consensus 354 ~~~~~~~~~L~~~i~~~~~ 372 (438)
....+++.+.|+++..
T Consensus 170 ---~~~~~ell~~l~~l~~ 185 (220)
T 1zye_A 170 ---GRSVEETLRLVKAFQF 185 (220)
T ss_dssp ---CCCHHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHhhh
Confidence 1234566666665543
No 73
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.81 E-value=9.8e-20 Score=178.52 Aligned_cols=119 Identities=18% Similarity=0.225 Sum_probs=110.0
Q ss_pred hhhcCCCCCc-----c-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEE
Q 013684 211 LLTNHDRGYL-----L-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 284 (438)
Q Consensus 211 ~~g~~~~~f~-----l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~i 284 (438)
.+|..+|+|+ + +.+|+ .+++++++||++||+||++||++|+.++|.|.+++++|+++ +++||+|
T Consensus 52 ~vG~~aPdF~~~~~wL~d~dG~-~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~---------~v~vi~V 121 (352)
T 2hyx_A 52 ESCGTAPDLKGITGWLNTPGNK-PIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDS---------GLAVIGV 121 (352)
T ss_dssp CCCCBCCCCCSCCEEESSGGGC-CCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG---------TEEEEEE
T ss_pred CCCCcCCCccccccccCCCCCC-EEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcC---------CeEEEEE
Confidence 4688999999 8 99999 99999999999999999999999999999999999999875 7999999
Q ss_pred ecC-----CCHHHHHHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 285 STD-----RDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 285 s~d-----~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
++| .+.+.+++++++++ +.+|+..|....+++.|+|.++|+++|||++|+++.+.
T Consensus 122 s~d~~~~~d~~~~~~~~~~~~~-l~fpv~~D~~~~l~~~ygV~~~Pt~~lID~~G~Iv~~~ 181 (352)
T 2hyx_A 122 HTPEYAFEKVPGNVAKGAANLG-ISYPIALDNNYATWTNYRNRYWPAEYLIDATGTVRHIK 181 (352)
T ss_dssp ECCSSGGGGCHHHHHHHHHHHT-CCSCEEECTTSHHHHHTTCCEESEEEEECTTSBEEEEE
T ss_pred ECCcccccCCHHHHHHHHHHcC-CCccEEeCCcHHHHHHcCCCccCEEEEEeCCCeEEEEE
Confidence 986 46788999999888 78999889889999999999999999999999999873
No 74
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.81 E-value=1.9e-20 Score=163.28 Aligned_cols=116 Identities=16% Similarity=0.172 Sum_probs=105.5
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCC--EEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEec
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGK--TVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 286 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk--~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~ 286 (438)
.+|..+|+|++ +.+|+ .+++++++|| +++|+|| ++|||+|..++|.|.+++++|+++ + +||+|++
T Consensus 8 ~~G~~~P~f~l~~~~G~-~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~---------~-~vv~is~ 76 (159)
T 2a4v_A 8 EIGDPIPDLSLLNEDND-SISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEY---------A-AVFGLSA 76 (159)
T ss_dssp CTTCBCCSCEEECTTSC-EEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTT---------C-EEEEEES
T ss_pred CCCCCCCCeEEECCCCC-EEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhC---------C-cEEEEeC
Confidence 36889999999 99999 9999999987 8999997 899999999999999999999866 6 9999999
Q ss_pred CCCHHHHHHHHhcCCCcccccCCchhHHHHHhcCcCcee------eEEEECCCCcEEEcc
Q 013684 287 DRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIP------CLVIIGPEGKTVTKQ 340 (438)
Q Consensus 287 d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P------~~~lid~~G~i~~~~ 340 (438)
| +.+..++|+++++ +.+|+..|....+.+.||+..+| ++||| ++|+|+++.
T Consensus 77 d-~~~~~~~~~~~~~-~~~~~l~D~~~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~~ 133 (159)
T 2a4v_A 77 D-SVTSQKKFQSKQN-LPYHLLSDPKREFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFKR 133 (159)
T ss_dssp C-CHHHHHHHHHHHT-CSSEEEECTTCHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEEE
T ss_pred C-CHHHHHHHHHHhC-CCceEEECCccHHHHHhCCcccccCCccceEEEE-cCCEEEEEE
Confidence 8 5678889998887 68999889889999999999988 89999 999999874
No 75
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=1.3e-21 Score=170.39 Aligned_cols=118 Identities=27% Similarity=0.409 Sum_probs=107.6
Q ss_pred hhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHH-HHHHHH-hhhhhcCCCCCCEEEEEEecCC
Q 013684 212 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLS-IYQKIK-QNLVEKGDALEDFEVVFVSTDR 288 (438)
Q Consensus 212 ~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~-l~~~~~-~~~~~~~~~~~~~~vv~is~d~ 288 (438)
+|..+|+|++ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+ ++++++ +. ++.|++|++|.
T Consensus 9 ~g~~~p~f~l~~~~g~-~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~---------~~~vv~v~~d~ 78 (159)
T 2ls5_A 9 IGEMAPDFTITLTDGK-QVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNA---------DFALIGIDRDE 78 (159)
Confidence 5888999999 99999 999999999999999999999999999999998 998887 43 79999999998
Q ss_pred CHHHHHHHHhcCCCcccccCCchhHHHHHhcC--cCceeeEEEECCCCcEEEcc
Q 013684 289 DQTSFESYFGTMPWLALPFGDPTIKELTKYFD--VQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 289 ~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~--v~~~P~~~lid~~G~i~~~~ 340 (438)
+.+.+++|.++++ +.+|+..|....+.+.|+ +.++|+++|||++|+++.+.
T Consensus 79 ~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~ 131 (159)
T 2ls5_A 79 PLEKVLAFAKSTG-VTYPLGLDPGADIFAKYALRDAGITRNVLIDREGKIVKLT 131 (159)
Confidence 7778889988887 689999999999999999 56799999999999999874
No 76
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.81 E-value=4.3e-20 Score=162.97 Aligned_cols=116 Identities=13% Similarity=0.172 Sum_probs=88.7
Q ss_pred hcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC----
Q 013684 213 TNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD---- 287 (438)
Q Consensus 213 g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d---- 287 (438)
+..+|+|++ +.+|+ .+++++++||+++|+||++||++|+ ++|.|.+++++|+++ +++||+|++|
T Consensus 9 ~~~~~~f~l~d~~G~-~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~---------~v~vv~vs~d~~~~ 77 (171)
T 3cmi_A 9 MSEFYKLAPVDKKGQ-PFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE---------GFTIIGFPCNQFGH 77 (171)
T ss_dssp -CGGGGCCCBBTTSC-BCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG---------TEEEEEEEECSCC-
T ss_pred hhheeeeEEEcCCCC-EecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC---------CeEEEEEECcccCC
Confidence 567899999 99999 9999999999999999999999999 999999999999876 7999999986
Q ss_pred ---CCHHHHHHHH-hcCCCcccccCCchh--HH----H-----HHhcCcCcee------eEEEECCCCcEEEcc
Q 013684 288 ---RDQTSFESYF-GTMPWLALPFGDPTI--KE----L-----TKYFDVQGIP------CLVIIGPEGKTVTKQ 340 (438)
Q Consensus 288 ---~~~~~~~~~~-~~~~~~~~p~~~d~~--~~----l-----~~~~~v~~~P------~~~lid~~G~i~~~~ 340 (438)
.+.+.+++|+ ++++ +.+|+..|.+ .. + .+.|++.++| +++|||++|+++.+.
T Consensus 78 ~~~d~~~~~~~~~~~~~~-~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~ 150 (171)
T 3cmi_A 78 QEPGSDEEIAQFCQLNYG-VTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERY 150 (171)
T ss_dssp -----------------C-CCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEE
T ss_pred CCCCCHHHHHHHHHhccC-CCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEe
Confidence 3556788888 7666 6788765421 11 1 2468999999 999999999999874
No 77
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.81 E-value=2.8e-20 Score=163.45 Aligned_cols=115 Identities=12% Similarity=0.079 Sum_probs=104.1
Q ss_pred hhcCCCCCcc-CCCCCceeeccccCCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 212 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 212 ~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
+|..+|+|++ +.+|+ .+++++++||+++|+|| ++||++|..++|.|++++++ + +++||+|+.| +
T Consensus 22 ~G~~aP~f~l~~~~G~-~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~---------~~~vv~is~d-~ 87 (166)
T 3p7x_A 22 EGDFAPDFTVLDNDLN-QVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---E---------EGIVLTISAD-L 87 (166)
T ss_dssp TTSBCCCCEEECTTSC-EEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---T---------TSEEEEEESS-C
T ss_pred CCCCCCCeEEEcCCCC-EEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---C---------CCEEEEEECC-C
Confidence 6889999999 99999 99999999999999999 78999999999999999877 3 6899999998 5
Q ss_pred HHHHHHHHhcCCCcccccCCch-hHHHHHhcCcCc------eeeEEEECCCCcEEEcc
Q 013684 290 QTSFESYFGTMPWLALPFGDPT-IKELTKYFDVQG------IPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~p~~~d~-~~~l~~~~~v~~------~P~~~lid~~G~i~~~~ 340 (438)
.+.+++|+++++.-.||+..|. ...+.+.||+.. +|++||||++|+|++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~ 145 (166)
T 3p7x_A 88 PFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKE 145 (166)
T ss_dssp HHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEE
T ss_pred HHHHHHHHHHcCCCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEE
Confidence 7788999998873279998888 889999999985 89999999999999874
No 78
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.81 E-value=2.6e-20 Score=163.65 Aligned_cols=116 Identities=12% Similarity=0.130 Sum_probs=104.7
Q ss_pred hhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCC-ChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 212 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARW-CIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 212 ~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~w-C~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
+|..+|+|++ +.+|+ .+++++++||+++|+||++| |++|+.++|.|.+++++| . +++||+|++| +
T Consensus 20 ~G~~~p~f~l~~~~G~-~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~---------~~~vv~is~d-~ 86 (167)
T 2jsy_A 20 VGDQAPDFTVLTNSLE-EKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--G---------DVNVYTISAD-L 86 (167)
T ss_dssp TTSCCCCCEEEBTTCC-EEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--S---------SCEEEEEECS-S
T ss_pred CCCcCCceEEECCCCC-EeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--C---------CCEEEEEECC-C
Confidence 6889999999 99999 99999999999999999999 999999999999999999 3 5899999998 4
Q ss_pred HHHHHHHHhcCCCcccccCCc-hhHHHHHhcCcCc------eeeEEEECCCCcEEEcc
Q 013684 290 QTSFESYFGTMPWLALPFGDP-TIKELTKYFDVQG------IPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~p~~~d-~~~~l~~~~~v~~------~P~~~lid~~G~i~~~~ 340 (438)
.+.+++|.+++++..+|+..| ....+.+.|++.. +|+++|||++|+|+++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~ 144 (167)
T 2jsy_A 87 PFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAE 144 (167)
T ss_dssp GGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEE
Confidence 566788888887438898888 7889999999987 49999999999999884
No 79
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.81 E-value=4.3e-20 Score=159.55 Aligned_cols=121 Identities=19% Similarity=0.299 Sum_probs=105.8
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDED 117 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~ 117 (438)
.+|..+|+|+ +.+.+|+.+++++++||+++|+||++||++|+.++|.|.++++++++.+ +++++|++|.+
T Consensus 4 ~~g~~~p~f~--------l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~v~~d~~ 73 (152)
T 2lrn_A 4 ATGSVAPAIT--------GIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKG--FTIYGVSTDRR 73 (152)
T ss_dssp CTTEECCCCE--------EECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTT--EEEEEEECCSC
T ss_pred cCCCcCCCce--------eEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCC--eEEEEEEccCC
Confidence 4789999999 8999999999999999999999999999999999999999999998765 99999999999
Q ss_pred HHHHHHhHhcCC--cccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCccccc
Q 013684 118 LNAFNNYRACMP--WLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 118 ~~~~~~~~~~~~--~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
.+.+.++.++.+ |..+.. .......+.+.|++.++|+++|||+ +|+++.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~ 126 (152)
T 2lrn_A 74 EEDWKKAIEEDKSYWNQVLL-QKDDVKDVLESYCIVGFPHIILVDP---EGKIVAKE 126 (152)
T ss_dssp HHHHHHHHHHHTCCSEEEEE-CHHHHHHHHHHTTCCSSCEEEEECT---TSEEEEEC
T ss_pred HHHHHHHHHHhCCCCeEEec-ccchhHHHHHHhCCCcCCeEEEECC---CCeEEEee
Confidence 999999998654 443332 2222478999999999999999999 99998774
No 80
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.81 E-value=8.9e-20 Score=163.94 Aligned_cols=118 Identities=13% Similarity=0.154 Sum_probs=100.6
Q ss_pred hhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCC--
Q 013684 212 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR-- 288 (438)
Q Consensus 212 ~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~-- 288 (438)
.+..+|+|++ +.+|+ .+++++++||++||+||++||++|+.++|.|.+++++|+++ +++||+|++|.
T Consensus 24 ~~~~~p~f~l~~~~G~-~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~---------~v~vv~vs~d~~~ 93 (190)
T 2vup_A 24 AASSIFDFEVLDADHK-PYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ---------GFTVLAFPCNQFG 93 (190)
T ss_dssp CCCSGGGSCCBBTTSS-BCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TCEEEEEECCCST
T ss_pred CCCcccCeEEEcCCCC-EEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC---------CeEEEEEEcCccC
Confidence 4678899999 99999 99999999999999999999999999999999999999876 79999999983
Q ss_pred -----CHHHHHHHH-hcCCCcccccCC--chhHH----HH-----HhcCcCcee------eEEEECCCCcEEEcc
Q 013684 289 -----DQTSFESYF-GTMPWLALPFGD--PTIKE----LT-----KYFDVQGIP------CLVIIGPEGKTVTKQ 340 (438)
Q Consensus 289 -----~~~~~~~~~-~~~~~~~~p~~~--d~~~~----l~-----~~~~v~~~P------~~~lid~~G~i~~~~ 340 (438)
+.+.+++|+ ++++ +.+|+.. |.... +. +.|++.++| ++||||++|+++.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~-~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~ 167 (190)
T 2vup_A 94 GQEPGNEEEIKEFVCTKFK-AEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERF 167 (190)
T ss_dssp TCCCSCHHHHHHHHHHHHC-CCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEE
T ss_pred CCCCCCHHHHHHHHHHhcC-CCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEE
Confidence 677889998 6766 6777764 32222 22 347999999 999999999999874
No 81
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.70 E-value=1.5e-21 Score=166.43 Aligned_cols=122 Identities=33% Similarity=0.689 Sum_probs=108.4
Q ss_pred CCCCCcc-CCCCCceeeccc-cCCC-EEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHH
Q 013684 215 HDRGYLL-GHPPDEKVPVSS-LVGK-TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQT 291 (438)
Q Consensus 215 ~~~~f~l-~~~g~~~~~l~~-~~gk-~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~ 291 (438)
..|+|++ +.+|+ .+++++ ++|| +++|+||++||++|+.+.|.|.++++++++. +.++.+++|++|.+.+
T Consensus 3 ~~p~~~l~~~~g~-~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~-------~~~~~v~~v~~d~~~~ 74 (143)
T 2lus_A 3 FIQGIKLVKKNRC-EVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDD-------SAPFEIIFVSSDRSED 74 (143)
Confidence 4689999 99999 999999 9999 9999999999999999999999999999643 2479999999998888
Q ss_pred HHHHHHhcCC--CcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcccchh
Q 013684 292 SFESYFGTMP--WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNL 344 (438)
Q Consensus 292 ~~~~~~~~~~--~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~ 344 (438)
.+++++++++ |..+++..+....+++.|+|.++|+++|||++|+++++++...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~ 129 (143)
T 2lus_A 75 DMFQYMMESHGDWLAIPYRSGPASNVTAKYGITGIPALVIVKKDGTLISMNGRGE 129 (143)
Confidence 8999998764 6677777787789999999999999999999999999876544
No 82
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.81 E-value=4.6e-19 Score=155.83 Aligned_cols=117 Identities=17% Similarity=0.291 Sum_probs=100.7
Q ss_pred CCCcc-CCCCCceeeccccCCCEEEEEEecCCChh-hhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCC---CHH
Q 013684 217 RGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIP-CEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR---DQT 291 (438)
Q Consensus 217 ~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~-C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~---~~~ 291 (438)
|+|++ +.+|+ .+++++++||+++|+||++||++ |+.++|.|.+++++|++. ...++++||+|++|. +.+
T Consensus 7 p~f~l~~~~G~-~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~-----~~~~~v~vv~is~d~~~d~~~ 80 (171)
T 2rli_A 7 GDFHLLDHRGR-ARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAE-----PGLPPVQPVFITVDPERDDVE 80 (171)
T ss_dssp SCCEEEETTSC-EEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHS-----TTSCCEEEEEEESCSTTCCHH
T ss_pred CCeEEEeCCCC-EEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhc-----cCCCceEEEEEEECCCCCCHH
Confidence 89999 99999 99999999999999999999998 999999999999999751 001379999999984 577
Q ss_pred HHHHHHhcCCCcccccCCc---hhHHHHHhcCcCcee---------------eEEEECCCCcEEEcc
Q 013684 292 SFESYFGTMPWLALPFGDP---TIKELTKYFDVQGIP---------------CLVIIGPEGKTVTKQ 340 (438)
Q Consensus 292 ~~~~~~~~~~~~~~p~~~d---~~~~l~~~~~v~~~P---------------~~~lid~~G~i~~~~ 340 (438)
.+++|+++++ +.++++.+ ....+++.||+..+| +++|||++|+++.+.
T Consensus 81 ~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~ 146 (171)
T 2rli_A 81 AMARYVQDFH-PRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYY 146 (171)
T ss_dssp HHHHHHHTTC-TTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEE
T ss_pred HHHHHHHHcC-CCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEE
Confidence 8999999877 56666543 446899999999998 999999999999874
No 83
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.81 E-value=1.9e-18 Score=161.40 Aligned_cols=181 Identities=15% Similarity=0.148 Sum_probs=118.0
Q ss_pred CCEEEEEEeccC--CccchhhHHHHHHHHHHHhc-CCC-CEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhh
Q 013684 71 GKVTALYFSANW--YPPCGNFTGVLVDVYEELRN-NGS-DFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 146 (438)
Q Consensus 71 gk~vll~F~a~w--C~~C~~~~p~l~~l~~~~~~-~~~-~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 146 (438)
+++|+|.||++| |++|+.+.|.+.++++.... +|+ .+.++.++.|.. ..+++
T Consensus 25 ~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~------------------------~~~~~ 80 (243)
T 2hls_A 25 VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESD------------------------SDKFS 80 (243)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTT------------------------HHHHH
T ss_pred CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcC------------------------HHHHH
Confidence 468999999999 99999999999999887421 121 166666655533 67899
Q ss_pred hcCcCccceEEEecCCCCCCCcccccchhHHhhhCCCCccCChhHHHHHHHHHHhhhhHHHHHhhhhcCCCCCccCCCCC
Q 013684 147 KFDIEGIPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRGYLLGHPPD 226 (438)
Q Consensus 147 ~~~v~~~P~~~lvd~~~~~G~v~~~~~~~~i~~~~~~a~p~~~e~l~~L~~~~~~~~~~~~~~~~~g~~~~~f~l~~~g~ 226 (438)
.|+|.++|++.+++ . ...+.++ + ..+.+..+...... . +...+ .+ +..
T Consensus 81 ~~gv~~~Pt~~i~~----g-~~~~~G~------------~-~~~~l~~fv~~~l~---------~-~~~~~--~l--~~~ 128 (243)
T 2hls_A 81 EFKVERVPTVAFLG----G-EVRWTGI------------P-AGEEIRALVEVIMR---------L-SEDES--GL--EDA 128 (243)
T ss_dssp HTTCCSSSEEEETT----T-TEEEESC------------C-CTTHHHHHHHHHHH---------H-HTTCC--CC--CHH
T ss_pred hcCCCcCCEEEEEC----C-ceeEcCC------------C-cHHHHHHHHHHHHh---------c-cCCCC--CC--CHH
Confidence 99999999999983 3 1111111 0 11112111111000 0 00000 11 000
Q ss_pred ceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccc
Q 013684 227 EKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALP 306 (438)
Q Consensus 227 ~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p 306 (438)
..-.+.++.|+++++.||++|||+|+.+.|.|.++++.++.. ..+++.+..|+++..
T Consensus 129 ~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~------~~~~v~~~~vd~~~~----------------- 185 (243)
T 2hls_A 129 TKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQ------GNPVILSEAVEAYEN----------------- 185 (243)
T ss_dssp HHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHT------TCCCEEEEEEETTTC-----------------
T ss_pred HHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccc------cCCcEEEEEEECccC-----------------
Confidence 001123456889999999999999999999999999998521 013688888887754
Q ss_pred cCCchhHHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 307 FGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 307 ~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.++++.|+|.++||+++ +|++++.
T Consensus 186 ------~~~~~~~~V~~vPt~~i---~G~~~~~ 209 (243)
T 2hls_A 186 ------PDIADKYGVMSVPSIAI---NGYLVFV 209 (243)
T ss_dssp ------HHHHHHTTCCSSSEEEE---TTEEEEE
T ss_pred ------HHHHHHcCCeeeCeEEE---CCEEEEe
Confidence 56788999999999988 7887644
No 84
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.81 E-value=4.4e-20 Score=162.10 Aligned_cols=115 Identities=13% Similarity=0.137 Sum_probs=103.6
Q ss_pred hhcCCCCCcc-CCCCCceeeccccCCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 212 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 212 ~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
+|..+|+|++ +.+|+ .+++++++||+++|+|| ++||++|..++|.|++++++| + +++||+|+.| +
T Consensus 19 ~G~~~P~f~l~~~~G~-~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~---------~v~vv~Is~d-~ 85 (165)
T 1q98_A 19 VGEIVENFILVGNDLA-DVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--S---------NTIVLCISAD-L 85 (165)
T ss_dssp TTCBCCCCEEECTTSC-EEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--T---------TEEEEEEESS-C
T ss_pred CCCCCCCeEEECCCCC-EEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--C---------CCEEEEEeCC-C
Confidence 6889999999 99999 99999999999999999 799999999999999999998 3 6999999998 5
Q ss_pred HHHHHHHHhcCCCc-ccccCCch-hHHHHHhcCcCc---------eeeEEEECCCCcEEEcc
Q 013684 290 QTSFESYFGTMPWL-ALPFGDPT-IKELTKYFDVQG---------IPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 290 ~~~~~~~~~~~~~~-~~p~~~d~-~~~l~~~~~v~~---------~P~~~lid~~G~i~~~~ 340 (438)
.+.+++|+++++ + ++|+..|. ...+.+.||+.. +|++||||++|+|+++.
T Consensus 86 ~~~~~~~~~~~~-~~~~~~l~D~~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~ 146 (165)
T 1q98_A 86 PFAQARFCGAEG-IENAKTVSTFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQ 146 (165)
T ss_dssp HHHHTTCTTTTT-CTTEEEEECTTCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred HHHHHHHHHHcC-CCceEEeeccccchHHHHhCceecccccCCccceeEEEEcCCCEEEEEE
Confidence 677888888877 5 68988886 789999999964 59999999999999885
No 85
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.81 E-value=9e-20 Score=162.41 Aligned_cols=122 Identities=14% Similarity=0.182 Sum_probs=99.4
Q ss_pred HHhhhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEec
Q 013684 208 LINLLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 286 (438)
Q Consensus 208 ~~~~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~ 286 (438)
..+..|...|+|++ +.+|+ .+++++++||++||+||++|||+|+.++|.|.+++++|+++ +++||+|++
T Consensus 10 ~~~~~~~~~p~f~l~d~~G~-~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~---------~~~vi~is~ 79 (180)
T 3kij_A 10 FLKPKINSFYAFEVKDAKGR-TVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS---------HFSVLAFPC 79 (180)
T ss_dssp CCCCCCCCGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT---------SEEEEEEEC
T ss_pred hhcCCcCcccceEEecCCCC-EecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC---------CeEEEEEEC
Confidence 34556888999999 99999 99999999999999999999999999999999999999865 799999998
Q ss_pred CC-------CHHHHHHHHhc-CCCcccccCC-----chhH-HHHHhc--CcCceee----EEEECCCCcEEEcc
Q 013684 287 DR-------DQTSFESYFGT-MPWLALPFGD-----PTIK-ELTKYF--DVQGIPC----LVIIGPEGKTVTKQ 340 (438)
Q Consensus 287 d~-------~~~~~~~~~~~-~~~~~~p~~~-----d~~~-~l~~~~--~v~~~P~----~~lid~~G~i~~~~ 340 (438)
|. +.+.+++|+++ ++ +.+|+.. +... .+...+ .+.++|+ +||||++|+++.+.
T Consensus 80 d~~~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~ 152 (180)
T 3kij_A 80 NQFGESEPRPSKEVESFARKNYG-VTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFW 152 (180)
T ss_dssp CCSTTCCCSCHHHHHHHHHHHHC-CCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEE
T ss_pred CccccCCCCCHHHHHHHHHHhcC-CCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEE
Confidence 75 77889999988 66 6677632 1111 122211 1246888 99999999999874
No 86
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.80 E-value=1.4e-19 Score=156.56 Aligned_cols=115 Identities=20% Similarity=0.336 Sum_probs=102.6
Q ss_pred hhhcCCCCCcc-CCCC--------CceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEE
Q 013684 211 LLTNHDRGYLL-GHPP--------DEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEV 281 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g--------~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~v 281 (438)
.+|..+|+|.+ +.+| + .+++++++||+++|+||++||++|+.+.|.|.+++++ + ++.+
T Consensus 9 ~~g~~~p~f~l~~~~g~~~~~~~~~-~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~----------~v~~ 75 (156)
T 1kng_A 9 LIGRPAPQTALPPLEGLQADNVQVP-GLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD--K----------RFQL 75 (156)
T ss_dssp ---CBCCCCCBCCCTTCEETTEECC-CBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC--T----------TSEE
T ss_pred HhCCCCCCceeeeccCcccccccCc-eechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc--C----------CeEE
Confidence 57889999999 9998 8 9999999999999999999999999999999988765 2 4899
Q ss_pred EEEecCCCHHHHHHHHhcCCCcccc-cCCchhHHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 282 VFVSTDRDQTSFESYFGTMPWLALP-FGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 282 v~is~d~~~~~~~~~~~~~~~~~~p-~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
++|++|.+.+.+++++++++ +.+| +..|....+++.|++.++|+++++|++|+++.+
T Consensus 76 v~v~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~v~~~P~~~~id~~G~i~~~ 133 (156)
T 1kng_A 76 VGINYKDAADNARRFLGRYG-NPFGRVGVDANGRASIEWGVYGVPETFVVGREGTIVYK 133 (156)
T ss_dssp EEEEESCCHHHHHHHHHHHC-CCCSEEEEETTSHHHHHTTCCSSCEEEEECTTSBEEEE
T ss_pred EEEECCCCHHHHHHHHHHcC-CCCceeeeCchhHHHHhcCcCccCeEEEEcCCCCEEEE
Confidence 99999999999999999887 6677 667778899999999999999999999999986
No 87
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.80 E-value=4.7e-19 Score=165.15 Aligned_cols=119 Identities=16% Similarity=0.189 Sum_probs=105.4
Q ss_pred hhhcCCCCCcc----CCCCCceeeccccCCCEEEEEEec-CCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEe
Q 013684 211 LLTNHDRGYLL----GHPPDEKVPVSSLVGKTVGLYFSA-RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 285 (438)
Q Consensus 211 ~~g~~~~~f~l----~~~g~~~~~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is 285 (438)
.+|..+|+|++ +.+|+ .+++++++||+++|+||+ +||++|..++|.|.+++++|+++ +++||+|+
T Consensus 49 ~vG~~aPdF~l~~~~d~~G~-~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~---------gv~vv~Is 118 (240)
T 3qpm_A 49 KISKPAPQWEGTAVINGEFK-ELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI---------NTEVVACS 118 (240)
T ss_dssp CTTSBCCCCEEEEEETTEEE-EEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT---------TEEEEEEE
T ss_pred CCCCCCCCcEeeeeeCCCCc-EEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC---------CCEEEEEE
Confidence 47999999996 44577 999999999999999998 99999999999999999999866 89999999
Q ss_pred cCCCHHHHHHHHhcC------CCcccccCCchhHHHHHhcCcC------ceeeEEEECCCCcEEEcc
Q 013684 286 TDRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 286 ~d~~~~~~~~~~~~~------~~~~~p~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~ 340 (438)
+|. .+..++|++.. ..+.||+..|....+.+.||+. .+|++||||++|+|+++.
T Consensus 119 ~D~-~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~ 184 (240)
T 3qpm_A 119 VDS-QFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQIT 184 (240)
T ss_dssp SSC-HHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred CCC-HHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHHHhCCccccCCCccceEEEEcCCCeEEEEE
Confidence 984 56677777765 2488999999899999999997 789999999999999874
No 88
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.80 E-value=7e-20 Score=159.86 Aligned_cols=111 Identities=15% Similarity=0.266 Sum_probs=99.8
Q ss_pred cc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC-----CCHHHH
Q 013684 220 LL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD-----RDQTSF 293 (438)
Q Consensus 220 ~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d-----~~~~~~ 293 (438)
++ +.+|+ .+++++++||+++|+||++||++|+.+.|.|.+++++|+.. +++||+|++| .+.+.+
T Consensus 22 ~l~~~~g~-~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~v~~~~~~~~~~~~~~ 91 (164)
T 2h30_A 22 TMKTADNR-PASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFS---------SANLITVASPGFLHEKKDGEF 91 (164)
T ss_dssp TCEETTSS-BGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT---------TSEEEEEECTTSTTCCCTTHH
T ss_pred ccCCCCCC-EeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccC---------CcEEEEEEcCCCccccCHHHH
Confidence 66 99999 99999999999999999999999999999999999998765 7999999985 345688
Q ss_pred HHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 294 ESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 294 ~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
+++++.+++..+++..|....+++.|+|.++|+++|||++|+++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 138 (164)
T 2h30_A 92 QKWYAGLNYPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIV 138 (164)
T ss_dssp HHHHTTSCCTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEE
T ss_pred HHHHHhCCCCcceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEE
Confidence 99998887555888888889999999999999999999999999873
No 89
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.80 E-value=8e-20 Score=160.01 Aligned_cols=117 Identities=16% Similarity=0.250 Sum_probs=105.8
Q ss_pred hhhcCCCCCcc---CCCC--Cceeeccc-cCCCEEEEEEe-cCCChhhh-hhhHHHHHHHHHHHhhhhhcCCCCCCEE-E
Q 013684 211 LLTNHDRGYLL---GHPP--DEKVPVSS-LVGKTVGLYFS-ARWCIPCE-KFMPKLLSIYQKIKQNLVEKGDALEDFE-V 281 (438)
Q Consensus 211 ~~g~~~~~f~l---~~~g--~~~~~l~~-~~gk~vll~F~-a~wC~~C~-~~~p~l~~l~~~~~~~~~~~~~~~~~~~-v 281 (438)
.+|..+|+|++ +.+| + .+++++ ++||+++|+|| ++|||+|. .++|.|++++++|+++ +++ |
T Consensus 5 ~~G~~aP~f~l~~~~~~G~~~-~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~---------~v~~v 74 (162)
T 1tp9_A 5 AVGDVLPDGKLAYFDEQDQLQ-EVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSK---------GVTEI 74 (162)
T ss_dssp CTTCBCCCCEEEEECTTSCEE-EEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT---------TCCCE
T ss_pred CCCCCCCCeEEEeecCCCCce-eEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC---------CCCEE
Confidence 36889999986 7899 8 999999 99999999999 89999999 9999999999999876 799 9
Q ss_pred EEEecCCCHHHHHHHHhcCCCc--ccccCCchhHHHHHhcCcC------c-----eeeEEEECCCCcEEEcc
Q 013684 282 VFVSTDRDQTSFESYFGTMPWL--ALPFGDPTIKELTKYFDVQ------G-----IPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 282 v~is~d~~~~~~~~~~~~~~~~--~~p~~~d~~~~l~~~~~v~------~-----~P~~~lid~~G~i~~~~ 340 (438)
++||.| +.+..++|.++++ + .||+..|.+.++++.||+. + +|++|||| +|+|++..
T Consensus 75 v~Is~d-~~~~~~~~~~~~~-~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G~i~~~~ 143 (162)
T 1tp9_A 75 LCISVN-DPFVMKAWAKSYP-ENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVD-DLKVKAAN 143 (162)
T ss_dssp EEEESS-CHHHHHHHHHTCT-TCSSEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEE-TTEEEEEE
T ss_pred EEEECC-CHHHHHHHHHhcC-CCCCeEEEECCCchHHHHcCcccccccCCCCccceeEEEEEE-CCEEEEEE
Confidence 999998 5678899999888 5 6899999899999999996 2 89999999 99999874
No 90
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.80 E-value=1.2e-19 Score=159.11 Aligned_cols=119 Identities=9% Similarity=0.086 Sum_probs=97.3
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCC-
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR- 288 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~- 288 (438)
.+|..+|+|++ +.+|+ .+++++++||+++|+||++||++|+.++|.|++++++|+++ +++||+|++|.
T Consensus 6 ~~g~~~p~f~l~~~~G~-~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~---------~~~vv~v~~d~~ 75 (169)
T 2v1m_A 6 KSWNSIYEFTVKDINGV-DVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK---------GLRILAFPCNQF 75 (169)
T ss_dssp -CCCSGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCCS
T ss_pred cCCcccccceeecCCCC-CccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC---------CeEEEEEECCcc
Confidence 36888999999 99999 99999999999999999999999999999999999999876 79999999973
Q ss_pred ------CHHHHHHH-HhcCCCcccccCC--chhHH----HHH-----hcC-----cCceeeEEEECCCCcEEEcc
Q 013684 289 ------DQTSFESY-FGTMPWLALPFGD--PTIKE----LTK-----YFD-----VQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 289 ------~~~~~~~~-~~~~~~~~~p~~~--d~~~~----l~~-----~~~-----v~~~P~~~lid~~G~i~~~~ 340 (438)
+.+.+++| .++++ +.+|+.. |.... +.+ .+| +..+|+++|||++|+++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~ 149 (169)
T 2v1m_A 76 GGQEPWAEAEIKKFVTEKYG-VQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRY 149 (169)
T ss_dssp TTCCCSCHHHHHHHHHHHHC-CCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEE
T ss_pred CCCCCCCHHHHHHHHHHhcC-CCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEc
Confidence 46788888 47666 5677663 32222 111 125 55679999999999999874
No 91
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.80 E-value=7.2e-20 Score=161.60 Aligned_cols=114 Identities=14% Similarity=0.141 Sum_probs=102.8
Q ss_pred hhcCCCCCcc-CCCCCceeeccccCCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 212 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 212 ~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
+|..+|+|++ +.+|+ .+++++++||+++|+|| ++|||+|..++|.|++++++| + +++||+|++| +
T Consensus 23 ~g~~~P~f~l~~~~G~-~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~---------~v~vv~Is~d-~ 89 (171)
T 2yzh_A 23 VGDRAPEAVVVTKDLQ-EKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--E---------GVDVTVVSMD-L 89 (171)
T ss_dssp TTSBCCCEEEEETTSC-EEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--T---------TEEEEEEESS-C
T ss_pred CCCcCCceEEECCCCC-EeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--C---------CceEEEEeCC-C
Confidence 5888999999 99999 99999999999999999 899999999999999999888 3 6999999998 5
Q ss_pred HHHHHHHHhcCCCc-ccccCCc-hhHHHHHhcCcCc---------eeeEEEECCCCcEEEcc
Q 013684 290 QTSFESYFGTMPWL-ALPFGDP-TIKELTKYFDVQG---------IPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 290 ~~~~~~~~~~~~~~-~~p~~~d-~~~~l~~~~~v~~---------~P~~~lid~~G~i~~~~ 340 (438)
.+..++|.++++ + .+|+..| ....+ +.||+.. +|++||||++|+|+++.
T Consensus 90 ~~~~~~~~~~~~-~~~~~~l~D~~~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~ 149 (171)
T 2yzh_A 90 PFAQKRFCESFN-IQNVTVASDFRYRDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQ 149 (171)
T ss_dssp HHHHHHHHHHTT-CCSSEEEECTTTCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred HHHHHHHHHHcC-CCCeEEeecCccCcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEE
Confidence 677888999887 5 7898888 77888 9999862 69999999999999885
No 92
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.80 E-value=2.7e-19 Score=163.19 Aligned_cols=118 Identities=11% Similarity=0.077 Sum_probs=95.6
Q ss_pred hhcCCCCCcc-CCC-CCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCC-
Q 013684 212 LTNHDRGYLL-GHP-PDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR- 288 (438)
Q Consensus 212 ~g~~~~~f~l-~~~-g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~- 288 (438)
.+..+|+|++ +.+ |+ .+++++++||+|||+|||+|||+|+.++|.|++++++|+++ +++||+|++|.
T Consensus 22 ~~~~~p~f~l~~~~~G~-~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~---------g~~vv~v~~d~~ 91 (208)
T 2f8a_A 22 SMQSVYAFSARPLAGGE-PVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR---------GLVVLGFPCNQF 91 (208)
T ss_dssp CCCCGGGCEECBTTCSS-CEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCCS
T ss_pred hcCccCceEeeeCCCCC-CccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC---------CeEEEEEECCcc
Confidence 3567899999 999 99 99999999999999999999999999999999999999876 79999999871
Q ss_pred ------CHHHHHHHHh------cCCCcccccCCch------h----HHHHHhc-------------------------Cc
Q 013684 289 ------DQTSFESYFG------TMPWLALPFGDPT------I----KELTKYF-------------------------DV 321 (438)
Q Consensus 289 ------~~~~~~~~~~------~~~~~~~p~~~d~------~----~~l~~~~-------------------------~v 321 (438)
+.+++++|++ +++ +.||+..+. . ..+...+ ++
T Consensus 92 ~~~e~d~~~~i~~f~~~~~~~~~~~-~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 170 (208)
T 2f8a_A 92 GHQENAKNEEILNSLKYVRPGGGFE-PNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDV 170 (208)
T ss_dssp TTTTCSCHHHHHHHHHHTSSCTTCC-CSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCC
T ss_pred cccCCCCHHHHHHHHHhcccccccc-cceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCcc
Confidence 4577888887 555 677775321 1 1111122 36
Q ss_pred CceeeEEEECCCCcEEEcc
Q 013684 322 QGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 322 ~~~P~~~lid~~G~i~~~~ 340 (438)
...|++||||++|+|+.+.
T Consensus 171 ~~~p~tflID~~G~i~~~~ 189 (208)
T 2f8a_A 171 AWNFEKFLVGPDGVPLRRY 189 (208)
T ss_dssp CSTTCEEEECTTSCEEEEE
T ss_pred ccCceEEEEcCCCcEEEEe
Confidence 6679999999999999874
No 93
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.80 E-value=2.1e-19 Score=162.49 Aligned_cols=118 Identities=16% Similarity=0.201 Sum_probs=106.3
Q ss_pred hhcCCCCCcc-CC--CCC--ceeecccc-CCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEE
Q 013684 212 LTNHDRGYLL-GH--PPD--EKVPVSSL-VGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 284 (438)
Q Consensus 212 ~g~~~~~f~l-~~--~g~--~~~~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~i 284 (438)
+|..+|+|++ +. +|+ +.++++++ +||+++|+|| ++||++|+.++|.|.+++++|+++ +++||+|
T Consensus 3 ~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~---------~v~vv~I 73 (198)
T 1zof_A 3 VTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK---------GFNVIGV 73 (198)
T ss_dssp TTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT---------TEEEEEE
T ss_pred CCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc---------CCEEEEE
Confidence 6889999999 87 784 26999999 9999999999 999999999999999999999876 7999999
Q ss_pred ecCCCHHHHHHHHhc-------CCCcccccCCchhHHHHHhcCcC-----ceeeEEEECCCCcEEEcc
Q 013684 285 STDRDQTSFESYFGT-------MPWLALPFGDPTIKELTKYFDVQ-----GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 285 s~d~~~~~~~~~~~~-------~~~~~~p~~~d~~~~l~~~~~v~-----~~P~~~lid~~G~i~~~~ 340 (438)
++|. .+..++|.++ ++ +.+|+..|....+.+.|++. ++|+++|||++|+++.+.
T Consensus 74 s~d~-~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~ 139 (198)
T 1zof_A 74 SIDS-EQVHFAWKNTPVEKGGIGQ-VSFPMVADITKSISRDYDVLFEEAIALRGAFLIDKNMKVRHAV 139 (198)
T ss_dssp ESSC-HHHHHHHHTSCGGGTCCCC-CSSCEEECTTSHHHHHTTCEETTTEECEEEEEEETTTEEEEEE
T ss_pred ECCC-HHHHHHHHHhhhhcccccC-ceeEEEECCchHHHHHhCCcccCCcccceEEEECCCCEEEEEE
Confidence 9984 6788888887 44 78899888889999999999 999999999999999874
No 94
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.80 E-value=9.9e-20 Score=155.75 Aligned_cols=125 Identities=18% Similarity=0.259 Sum_probs=106.7
Q ss_pred HHHhhccchhHHHHHhhcccccCCCCCEEecc--ccCCCEEEEEEeccCCccchhhHHHHHHHHHHH-hcCCCCEEEEEE
Q 013684 36 RFLIMSLSQWYVQQLRRRMTSTKEIGEEVKVS--DLEGKVTALYFSANWYPPCGNFTGVLVDVYEEL-RNNGSDFEVVFV 112 (438)
Q Consensus 36 ~~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~--~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~-~~~~~~~~iv~v 112 (438)
.+.+|.++|+|+ +.+.+|+.++++ +++||+++|+||++||++|+.++|.|.++++++ ++.+ +.++.|
T Consensus 4 ~~~~g~~~p~~~--------l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~--~~~v~v 73 (148)
T 3fkf_A 4 KVTVGKSAPYFS--------LPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKN--FAMLGI 73 (148)
T ss_dssp -CCTTSBCCCCC--------EEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTT--EEEEEE
T ss_pred cccCCCcCCCeE--------eeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCC--eEEEEE
Confidence 345899999999 899999999999 999999999999999999999999999999999 6654 999999
Q ss_pred ecCCCHHHHHHhHhcCCcccccCCCh-HHHHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 113 SSDEDLNAFNNYRACMPWLAVPYSDL-ETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 113 s~D~~~~~~~~~~~~~~~~~~~~~d~-~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
++|.+.+.++++.+.+++....+.+. +....+++.|++.++|++++||+ +|+++.+..
T Consensus 74 ~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~~ 132 (148)
T 3fkf_A 74 SLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAILTLPTNILLSP---TGKILARDI 132 (148)
T ss_dssp ECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECT---TSBEEEESC
T ss_pred ECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCCCCcCEEEEECC---CCeEEEecC
Confidence 99999999999998765432222232 11368999999999999999999 999987653
No 95
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.80 E-value=1.2e-19 Score=158.62 Aligned_cols=120 Identities=21% Similarity=0.271 Sum_probs=105.7
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCE-EEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKV-TALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD 115 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~-vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D 115 (438)
.+|..+|+|+ +.+.+|+.+++++++||+ ++|+|| ++||++|+.++|.|.++++++++.| +++++|+.|
T Consensus 3 ~~G~~~P~f~--------l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~--v~vv~vs~d 72 (161)
T 3drn_A 3 KVGDKAPLFE--------GIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYD--VVVIGVSSD 72 (161)
T ss_dssp CTTSBCCCCE--------EEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTC--EEEEEEESC
T ss_pred CCCCcCCCeE--------eecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcC--CEEEEEeCC
Confidence 4799999999 999999999999999997 999999 9999999999999999999999876 999999998
Q ss_pred CCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCc----cceEEEecCCCCCCCcccccc
Q 013684 116 EDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEG----IPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~----~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+.+.++++.+++++....+.|.+ ..+.+.|++.+ +|+++|||+ +|+++....
T Consensus 73 -~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~~~~~P~~~lid~---~G~i~~~~~ 128 (161)
T 3drn_A 73 -DINSHKRFKEKYKLPFILVSDPD--KKIRELYGAKGFILPARITFVIDK---KGIIRHIYN 128 (161)
T ss_dssp -CHHHHHHHHHHTTCCSEEEECTT--SHHHHHTTCCCSSSCCCEEEEECT---TSBEEEEEE
T ss_pred -CHHHHHHHHHHhCCCceEEECCc--HHHHHHcCCCCcCcccceEEEECC---CCEEEEEEe
Confidence 57889999998765433333433 68899999999 999999999 999987654
No 96
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.80 E-value=1.3e-19 Score=161.77 Aligned_cols=119 Identities=9% Similarity=0.071 Sum_probs=99.9
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC--
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD-- 287 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d-- 287 (438)
.+|..+|+|++ +.+|+ .+++++++||+++|+||++||++|+.++|.|.+++++|+++ +++||+|++|
T Consensus 22 ~~g~~~p~f~l~~~~G~-~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~---------~v~vv~vs~d~~ 91 (183)
T 2obi_A 22 RCARSMHEFSAKDIDGH-MVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC---------GLRILAFPCNQF 91 (183)
T ss_dssp GGCCSGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCCS
T ss_pred cccCcccceEEEcCCCC-EeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC---------CeEEEEEECCCC
Confidence 46889999999 99999 99999999999999999999999999999999999999876 7999999987
Q ss_pred -----CCHHHHHHHHhcCCCcccccCC--chhHH----HHHhc-------C-----cCceeeEEEECCCCcEEEcc
Q 013684 288 -----RDQTSFESYFGTMPWLALPFGD--PTIKE----LTKYF-------D-----VQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 288 -----~~~~~~~~~~~~~~~~~~p~~~--d~~~~----l~~~~-------~-----v~~~P~~~lid~~G~i~~~~ 340 (438)
.+.+.+++|+++++ +.+|+.. |.... +.+.+ + +..+|+++|||++|+++.+.
T Consensus 92 ~~~e~~~~~~~~~~~~~~~-~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~ 166 (183)
T 2obi_A 92 GKQEPGSNEEIKEFAAGYN-VKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRY 166 (183)
T ss_dssp TTCCCSCHHHHHHHHHTTT-CCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEE
T ss_pred CCCCCCCHHHHHHHHHHcC-CCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEe
Confidence 36788999998887 6778764 32222 22222 4 44569999999999999874
No 97
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.80 E-value=8.2e-20 Score=165.66 Aligned_cols=115 Identities=14% Similarity=0.187 Sum_probs=104.8
Q ss_pred hhcCCCCCcc-CCCCCceeeccccCCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 212 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 212 ~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
+|..+|+|++ +.+|+ .+++++++||+++|+|| ++||++|..++|.|++++++| + +++||+|+.| +
T Consensus 54 ~G~~aPdf~l~d~~G~-~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~---------~v~vv~Is~D-~ 120 (200)
T 3zrd_A 54 IGDKAKDFTLVAKDLS-DVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--E---------NTVVLCISSD-L 120 (200)
T ss_dssp TTCBCCCCEEECTTSC-EEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--T---------TEEEEEEESS-C
T ss_pred CCCCCCCeEEECCCCC-EEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--C---------CCEEEEEECC-C
Confidence 5889999999 99999 99999999999999999 689999999999999999988 3 6999999998 5
Q ss_pred HHHHHHHHhcCCCc-ccccCCch-hHHHHHhcCcC---------ceeeEEEECCCCcEEEcc
Q 013684 290 QTSFESYFGTMPWL-ALPFGDPT-IKELTKYFDVQ---------GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 290 ~~~~~~~~~~~~~~-~~p~~~d~-~~~l~~~~~v~---------~~P~~~lid~~G~i~~~~ 340 (438)
.+.+++|+++++ + .||+..|. ...+.+.||+. .+|++||||++|+|+++.
T Consensus 121 ~~~~~~~~~~~~-~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~ 181 (200)
T 3zrd_A 121 PFAQSRFCGAEG-LSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSE 181 (200)
T ss_dssp HHHHTTCTTTTT-CTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred HHHHHHHHHHcC-CCCceEEecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEE
Confidence 678888888887 6 89999888 89999999996 369999999999999875
No 98
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.79 E-value=4e-20 Score=158.19 Aligned_cols=123 Identities=18% Similarity=0.162 Sum_probs=106.0
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDED 117 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~ 117 (438)
.+|.++|+|+ +.+.+|+.+++++++||+++|+||++||++|+.++|.|.++++++++.+ +.++.|++|.+
T Consensus 6 ~~G~~~p~~~--------l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~--~~~v~v~~d~~ 75 (148)
T 3hcz_A 6 LLGKKAPNLY--------MTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKG--IQVYAANIERK 75 (148)
T ss_dssp CTTSBCCCCC--------CBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGT--EEEEEEECCSS
T ss_pred CCCCcCCceE--------EecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCC--EEEEEEEecCC
Confidence 4799999999 9999999999999999999999999999999999999999999998875 99999999988
Q ss_pred HHHHHHhHhcCCccccc-CCChHHHHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 118 LNAFNNYRACMPWLAVP-YSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 118 ~~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
.+.++++.+.+++...+ ..|......+.+.|++.++|+++|+|+ +|+++.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~---~G~i~~~~~ 129 (148)
T 3hcz_A 76 DEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDK---NKVIIAKRI 129 (148)
T ss_dssp SHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECT---TCBEEEESC
T ss_pred HHHHHHHHHHcCCCCceEEeccccchhHHHhcCcCCCCEEEEECC---CCcEEEecC
Confidence 89999999977643121 223332123889999999999999999 999987643
No 99
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.79 E-value=3.1e-19 Score=157.13 Aligned_cols=116 Identities=15% Similarity=0.162 Sum_probs=105.0
Q ss_pred hhcCCCCCcc--CCCCCceeecccc-CCCEEEEEEe-cCCChhhhh-hhHHHHHHHHHHHhhhhhcCCCCCCE-EEEEEe
Q 013684 212 LTNHDRGYLL--GHPPDEKVPVSSL-VGKTVGLYFS-ARWCIPCEK-FMPKLLSIYQKIKQNLVEKGDALEDF-EVVFVS 285 (438)
Q Consensus 212 ~g~~~~~f~l--~~~g~~~~~l~~~-~gk~vll~F~-a~wC~~C~~-~~p~l~~l~~~~~~~~~~~~~~~~~~-~vv~is 285 (438)
+|..+|+|++ +.+|+ .++++++ +||+++|+|| ++|||+|.. ++|.|++++++|+++ ++ +||+||
T Consensus 5 ~G~~aP~f~l~~~~~G~-~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~---------gv~~vv~Is 74 (167)
T 2wfc_A 5 EGDKLPAVTVFGATPND-KVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGK---------GVDIIACMA 74 (167)
T ss_dssp TTCBCCCCEEESSSTTC-EEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHT---------TCCEEEEEE
T ss_pred CCCcCCCcEeecCCCCc-EEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC---------CCCEEEEEe
Confidence 6889999998 78899 9999998 9999999886 999999999 999999999999876 79 999999
Q ss_pred cCCCHHHHHHHHhcCCCcc--cccCCchhHHHHHhcCcCce-----------eeEEEECCCCcEEEcc
Q 013684 286 TDRDQTSFESYFGTMPWLA--LPFGDPTIKELTKYFDVQGI-----------PCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 286 ~d~~~~~~~~~~~~~~~~~--~p~~~d~~~~l~~~~~v~~~-----------P~~~lid~~G~i~~~~ 340 (438)
.| +.+..++|.++++ +. ||++.|...++.+.||+... |++||| ++|+|++..
T Consensus 75 ~d-~~~~~~~~~~~~~-~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G~I~~~~ 139 (167)
T 2wfc_A 75 VN-DSFVMDAWGKAHG-ADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDGVVTKVN 139 (167)
T ss_dssp SS-CHHHHHHHHHHTT-CTTTSEEEECTTSHHHHHTTCEECCHHHHSSCEECCEEEEE-ETTEEEEEE
T ss_pred CC-CHHHHHHHHHhcC-CCcceEEEECCCCcHHHHcCCccccccccCcccceEEEEEE-eCCEEEEEE
Confidence 98 5678899999887 56 99999999999999999754 999999 999999874
No 100
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.79 E-value=2.9e-19 Score=159.86 Aligned_cols=118 Identities=8% Similarity=0.037 Sum_probs=98.2
Q ss_pred hhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCC--
Q 013684 212 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR-- 288 (438)
Q Consensus 212 ~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~-- 288 (438)
+|..+|+|++ +.+|+ .+++++++||+++|+||++|||+|+.++|.|++++++|+++ +++||+|++|.
T Consensus 25 ~g~~~p~f~l~~~~G~-~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~---------~v~vv~is~d~~~ 94 (185)
T 2gs3_A 25 CARSMHEFSAKDIDGH-MVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC---------GLRILAFPCNQFG 94 (185)
T ss_dssp GCCCGGGCEEEBTTSC-EEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG---------TEEEEEEECCTTT
T ss_pred CCCCcCCceeEcCCCC-EeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC---------CeEEEEEECcccC
Confidence 6888999999 99999 99999999999999999999999999999999999999876 79999999873
Q ss_pred -----CHHHHHHHHhcCCCcccccCC--chhH----HHHHhc-------Cc-----CceeeEEEECCCCcEEEcc
Q 013684 289 -----DQTSFESYFGTMPWLALPFGD--PTIK----ELTKYF-------DV-----QGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 289 -----~~~~~~~~~~~~~~~~~p~~~--d~~~----~l~~~~-------~v-----~~~P~~~lid~~G~i~~~~ 340 (438)
+.+.+++++++++ +.+|+.. |... .+.+.+ |+ ..+|++||||++|+++.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~-~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~ 168 (185)
T 2gs3_A 95 KQEPGSNEEIKEFAAGYN-VKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRY 168 (185)
T ss_dssp TCCCSCHHHHHHHHHHTT-CCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEE
T ss_pred CCCCCCHHHHHHHHHHcC-CCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEee
Confidence 4678899998877 6677764 3222 122222 43 3469999999999999874
No 101
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.79 E-value=1.5e-19 Score=158.63 Aligned_cols=115 Identities=20% Similarity=0.185 Sum_probs=101.7
Q ss_pred hhhcCCCCCcc-CC--CCCceeecccc-CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEec
Q 013684 211 LLTNHDRGYLL-GH--PPDEKVPVSSL-VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 286 (438)
Q Consensus 211 ~~g~~~~~f~l-~~--~g~~~~~l~~~-~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~ 286 (438)
.+|..+|+|++ +. +|+ .+.++++ +||+++|+||++|||+|+.+.|.|.+++++ ++.|++|++
T Consensus 23 ~~G~~~P~f~l~~~~~~g~-~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-------------~v~vv~v~~ 88 (168)
T 2b1k_A 23 LIGKPVPKFRLESLDNPGQ-FYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ-------------GIRVVGMNY 88 (168)
T ss_dssp TTTSBCCCCEEEESSSTTC-EEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-------------TCCEEEEEE
T ss_pred ccCCcCCCeEeecccCCCc-EeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-------------CCEEEEEEC
Confidence 47999999999 88 899 9998885 899999999999999999999999888764 378999999
Q ss_pred CCCHHHHHHHHhcCCCcccc-cCCchhHHHHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 287 DRDQTSFESYFGTMPWLALP-FGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 287 d~~~~~~~~~~~~~~~~~~p-~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
|.+.+.+++|+++++ +.+| +..|....+++.|+|.++|++++||++|+++.+.
T Consensus 89 ~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 142 (168)
T 2b1k_A 89 KDDRQKAISWLKELG-NPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRH 142 (168)
T ss_dssp SCCHHHHHHHHHHHC-CCCSEEEEETTCHHHHHHTCCSSSEEEEECTTSBEEEEE
T ss_pred CCChHHHHHHHHHcC-CCCceeeECcchHHHHHcCccccCEEEEECCCCeEEEEE
Confidence 989999999999877 5566 4567778899999999999999999999999773
No 102
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.79 E-value=5.1e-19 Score=156.17 Aligned_cols=139 Identities=16% Similarity=0.164 Sum_probs=110.7
Q ss_pred hhcCCC-CCcc-CCCCCceeeccccCCCEEEEEEecCCCh-hhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC-
Q 013684 212 LTNHDR-GYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCI-PCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD- 287 (438)
Q Consensus 212 ~g~~~~-~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~-~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d- 287 (438)
+|..+| +|++ +.+|+ .+++++++||+++|+||++||+ +|..+++.|.+++++++.. +.+++||+|++|
T Consensus 3 ~G~~~P~~f~l~d~~G~-~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~-------~~~~~vv~is~d~ 74 (170)
T 3me7_A 3 LGTYVPGDITLVDSYGN-EFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTP-------GKDFWVITFTFDP 74 (170)
T ss_dssp TTCBCCTTCEEEETTCC-EEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCB-------TTTBEEEEEECCT
T ss_pred CCCcCCCCeEEEcCCcC-EEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhc-------CCceEEEEEECCC
Confidence 688999 9999 99999 9999999999999999999998 6999999999999999753 347999999998
Q ss_pred -CCHHHHHHHHhcCCCcccc---c----CCchhHHHHHhcCc---------CceeeEEEECCCCcEEEcccchhhhhccc
Q 013684 288 -RDQTSFESYFGTMPWLALP---F----GDPTIKELTKYFDV---------QGIPCLVIIGPEGKTVTKQGRNLINLYQE 350 (438)
Q Consensus 288 -~~~~~~~~~~~~~~~~~~p---~----~~d~~~~l~~~~~v---------~~~P~~~lid~~G~i~~~~~~~~~~~~g~ 350 (438)
++.+.+++|+++++ +.++ + ..+....+++.||+ ...|++||||++|+|+... +|.
T Consensus 75 ~d~~~~~~~~~~~~~-~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~-------~g~ 146 (170)
T 3me7_A 75 KDTLEDIKRFQKEYG-IDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYI-------YGV 146 (170)
T ss_dssp TCCHHHHHHHHHHTT-CCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEE-------ESS
T ss_pred CCCHHHHHHHHHHcC-CCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEE-------eCC
Confidence 46788999998877 3333 1 12466789998774 4568999999999999762 332
Q ss_pred cCCCCCHHHHHHHHHHHHHHhc
Q 013684 351 NAYPFTEAKLEFLEKQMEEEAK 372 (438)
Q Consensus 351 ~~~~~~~~~~~~L~~~i~~~~~ 372 (438)
. .. .+++.++|+++..
T Consensus 147 ~---~~---~~~i~~~l~~~~~ 162 (170)
T 3me7_A 147 N---YN---YLEFVNALRLARG 162 (170)
T ss_dssp S---CC---HHHHHHHHHHHTT
T ss_pred C---CC---HHHHHHHHHHhhc
Confidence 1 12 4666777766554
No 103
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.79 E-value=6.3e-19 Score=155.63 Aligned_cols=143 Identities=15% Similarity=0.153 Sum_probs=105.3
Q ss_pred HhhhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCCh-hhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEec
Q 013684 209 INLLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCI-PCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 286 (438)
Q Consensus 209 ~~~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~-~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~ 286 (438)
...+|.++|+|+| |.+|+ .+++++++||+++|+||++||| +|...++.|.++++.+++. +.++++|+||+
T Consensus 5 ~~P~~~~~PdF~L~d~~G~-~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~-------~~~v~~v~isv 76 (170)
T 4hde_A 5 RKPLNWDLETFQFTNQDGK-PFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEE-------KLDVQFVSFSV 76 (170)
T ss_dssp CSCCCBCCCCCEEECTTSC-EEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHT-------TCCCEEEEEES
T ss_pred ccCCCCcCCCcEEECCCCC-EEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcc-------cccceeEeeec
Confidence 4457889999999 99999 9999999999999999999998 8999999999999999876 56799999999
Q ss_pred CC---CHHHHHHHHhcCCC--cccccCCc-h----hHHHHHhc----------CcCceeeEEEECCCCcEEEcccchhhh
Q 013684 287 DR---DQTSFESYFGTMPW--LALPFGDP-T----IKELTKYF----------DVQGIPCLVIIGPEGKTVTKQGRNLIN 346 (438)
Q Consensus 287 d~---~~~~~~~~~~~~~~--~~~p~~~d-~----~~~l~~~~----------~v~~~P~~~lid~~G~i~~~~~~~~~~ 346 (438)
|. +.+.+++|+++++. ..+.++.+ . .......| .+...|++||||++|+++....
T Consensus 77 Dp~~Dtp~~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~----- 151 (170)
T 4hde_A 77 DPDLDKPENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYS----- 151 (170)
T ss_dssp CTTTCCHHHHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEE-----
T ss_pred CcccccHHHHHHHHHHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEEC-----
Confidence 84 56788999987651 11222111 1 11222233 3345689999999999997631
Q ss_pred hccccCCCCCHHHHHHHHHHHHHHh
Q 013684 347 LYQENAYPFTEAKLEFLEKQMEEEA 371 (438)
Q Consensus 347 ~~g~~~~~~~~~~~~~L~~~i~~~~ 371 (438)
|. .....++|.+.|+.++
T Consensus 152 --g~-----~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 152 --GI-----SNTPYEDIIRDMKRLA 169 (170)
T ss_dssp --SS-----SSCCHHHHHHHHHHHH
T ss_pred --CC-----CCCCHHHHHHHHHHHh
Confidence 21 1122456666666654
No 104
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.79 E-value=6.4e-19 Score=174.18 Aligned_cols=192 Identities=16% Similarity=0.206 Sum_probs=125.4
Q ss_pred CCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCc
Q 013684 71 GKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDI 150 (438)
Q Consensus 71 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v 150 (438)
.++++|.|+++||++|+.+.|.|.+++++++++ +.++.|+.|.... ..+++.|+|
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~---i~f~~vd~~~~~~----------------------~~~~~~fgi 189 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK---ILFIFIDSDHTDN----------------------QRILEFFGL 189 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT---CEEEEECTTSGGG----------------------HHHHHHTTC
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc---eEEEEecCChHHH----------------------HHHHHHcCC
Confidence 357899999999999999999999999999754 6666665442112 788899999
Q ss_pred Cc--cceEEEecCCCCCCCcccccchhHHhhhCCCCccCChhHHHHHHHHHHhhhhHHHHHhhhhcCCCC----Ccc-CC
Q 013684 151 EG--IPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRG----YLL-GH 223 (438)
Q Consensus 151 ~~--~P~~~lvd~~~~~G~v~~~~~~~~i~~~~~~a~p~~~e~l~~L~~~~~~~~~~~~~~~~~g~~~~~----f~l-~~ 223 (438)
.. +|++++++. ++..... ....-..+.+.+..+............+ .....|. -.+ ..
T Consensus 190 ~~~~~P~~~~~~~---~~~~~ky---------~~~~~~~~~~~l~~fi~~~l~g~~~~~~---~s~~~p~~~~~~~v~~l 254 (361)
T 3uem_A 190 KKEECPAVRLITL---EEEMTKY---------KPESEELTAERITEFCHRFLEGKIKPHL---MSQELPEDWDKQPVKVL 254 (361)
T ss_dssp CTTTCSEEEEEEC---C--CCEE---------CCSSCCCCHHHHHHHHHHHHTTCSCCCC---BCCCCCTTTTTSSSEEE
T ss_pred CccCCccEEEEEc---CCccccc---------CCCccccCHHHHHHHHHHHhcCCCcccc---cCCCCCcccccCCcEEe
Confidence 87 999999985 4332111 1011234455555544433221110000 0111121 112 34
Q ss_pred CCCceeeccc-cCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCC
Q 013684 224 PPDEKVPVSS-LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPW 302 (438)
Q Consensus 224 ~g~~~~~l~~-~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~ 302 (438)
+++ .+.... ..+|+++|+|||+||++|+.+.|.|.++++.++++ .++.++.|+++.+
T Consensus 255 ~~~-~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~--------~~v~~~~vd~~~~------------- 312 (361)
T 3uem_A 255 VGK-NFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDH--------ENIVIAKMDSTAN------------- 312 (361)
T ss_dssp CTT-THHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTC--------SSEEEEEEETTTC-------------
T ss_pred ecC-chhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccC--------CcEEEEEEECCcc-------------
Confidence 444 333222 25799999999999999999999999999999753 3577777766543
Q ss_pred cccccCCchhHHHHHhcCcCceeeEEEECCC-CcE
Q 013684 303 LALPFGDPTIKELTKYFDVQGIPCLVIIGPE-GKT 336 (438)
Q Consensus 303 ~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~-G~i 336 (438)
. ++.|+|.++||+++++++ |+.
T Consensus 313 ----------~--~~~~~v~~~Pt~~~~~~~~~~~ 335 (361)
T 3uem_A 313 ----------E--VEAVKVHSFPTLKFFPASADRT 335 (361)
T ss_dssp ----------B--CSSCCCCSSSEEEEECSSSSCC
T ss_pred ----------c--hhhcCCcccCeEEEEECCCCcc
Confidence 1 467999999999999655 443
No 105
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.79 E-value=3.8e-19 Score=157.32 Aligned_cols=120 Identities=14% Similarity=0.141 Sum_probs=103.9
Q ss_pred HhhhhcCCCCCcc--CCCCCceeeccc-cCCCEEEEEE-ecCCChhhh-hhhHHHHHHHHHHHhhhhhcCCCCCCEEEEE
Q 013684 209 INLLTNHDRGYLL--GHPPDEKVPVSS-LVGKTVGLYF-SARWCIPCE-KFMPKLLSIYQKIKQNLVEKGDALEDFEVVF 283 (438)
Q Consensus 209 ~~~~g~~~~~f~l--~~~g~~~~~l~~-~~gk~vll~F-~a~wC~~C~-~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~ 283 (438)
...+|..+|+|++ +.+|+ .+++++ ++||+++|+| |++|||+|. .++|.|.+++++|+++ +++||+
T Consensus 14 ~~~vG~~aPdf~l~~~~~g~-~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~---------gv~vv~ 83 (173)
T 3mng_A 14 PIKVGDAIPAVEVFEGEPGN-KVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAK---------GVQVVA 83 (173)
T ss_dssp CCCTTCBCCCCEEECSSTTC-EEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT---------TCCEEE
T ss_pred CCCCCCCCCCeEeeeCCCCC-EEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhC---------CCEEEE
Confidence 3467999999999 68999 999999 5999666555 599999999 5999999999999876 899997
Q ss_pred -EecCCCHHHHHHHHhcCCCc-ccccCCchhHHHHHhcCcC-------------ceeeEEEECCCCcEEEcc
Q 013684 284 -VSTDRDQTSFESYFGTMPWL-ALPFGDPTIKELTKYFDVQ-------------GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 284 -is~d~~~~~~~~~~~~~~~~-~~p~~~d~~~~l~~~~~v~-------------~~P~~~lid~~G~i~~~~ 340 (438)
||.| +.+..++|.++++.- .||++.|...++++.||+. ..|++|||| +|+|++..
T Consensus 84 ~iS~D-~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~ 153 (173)
T 3mng_A 84 CLSVN-DAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALN 153 (173)
T ss_dssp EEESS-CHHHHHHHHHHTTCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEE
T ss_pred EEcCC-CHHHHHHHHHHhCCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCEEEEEE
Confidence 9998 567889999988832 3999999999999999985 359999999 99999985
No 106
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.78 E-value=1.3e-19 Score=161.91 Aligned_cols=136 Identities=12% Similarity=0.112 Sum_probs=111.2
Q ss_pred hhhcCCCCCcc-CC--CC-Cceeeccc-cCCCEE-EEEEecCCChhhhh-hhHHHHHHHHHHHhhhhhcCCCCCCEE-EE
Q 013684 211 LLTNHDRGYLL-GH--PP-DEKVPVSS-LVGKTV-GLYFSARWCIPCEK-FMPKLLSIYQKIKQNLVEKGDALEDFE-VV 282 (438)
Q Consensus 211 ~~g~~~~~f~l-~~--~g-~~~~~l~~-~~gk~v-ll~F~a~wC~~C~~-~~p~l~~l~~~~~~~~~~~~~~~~~~~-vv 282 (438)
.+|..+|+|++ +. +| + .+++++ ++||++ |++||++|||+|.. ++|.|++++++|+++ +++ |+
T Consensus 27 ~vG~~aPdf~l~~~~~~G~~-~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~---------gv~~vv 96 (184)
T 3uma_A 27 AVGDKLPNATFKEKTADGPV-EVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILAR---------GVDDIA 96 (184)
T ss_dssp CTTCBCCCCEEEEEETTEEE-EEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTT---------TCCEEE
T ss_pred CCCCCCCCcEeecccCCCce-EEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHc---------CCCEEE
Confidence 47899999999 87 88 8 999999 899955 55566999999999 799999999999876 788 99
Q ss_pred EEecCCCHHHHHHHHhcCCCcc--cccCCchhHHHHHhcCcC-----------ceeeEEEECCCCcEEEcccchhhhhcc
Q 013684 283 FVSTDRDQTSFESYFGTMPWLA--LPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTKQGRNLINLYQ 349 (438)
Q Consensus 283 ~is~d~~~~~~~~~~~~~~~~~--~p~~~d~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~~~~~~~~~~g 349 (438)
+||.| +.+..++|.++++ +. ||++.|.+.++++.||+. ..|++|||| +|+|++.. .|
T Consensus 97 ~Is~d-~~~~~~~f~~~~~-~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~I~~~~-------~~ 166 (184)
T 3uma_A 97 VVAVN-DLHVMGAWATHSG-GMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGVVKALN-------IE 166 (184)
T ss_dssp EEESS-CHHHHHHHHHHHT-CTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTEEEEEE-------EC
T ss_pred EEECC-CHHHHHHHHHHhC-CCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEEC-CCEEEEEE-------Ee
Confidence 99998 5678889998887 55 999999999999999995 357899996 99999984 34
Q ss_pred ccCCCCCHHHHHHHHHH
Q 013684 350 ENAYPFTEAKLEFLEKQ 366 (438)
Q Consensus 350 ~~~~~~~~~~~~~L~~~ 366 (438)
.++-+++....+++.++
T Consensus 167 ~~~g~~~~~~~~~vL~~ 183 (184)
T 3uma_A 167 ESPGQATASGAAAMLEL 183 (184)
T ss_dssp SSTTCCSTTSHHHHHHH
T ss_pred CCCCCCcCCCHHHHHhh
Confidence 43334455555555543
No 107
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.78 E-value=2.1e-19 Score=159.29 Aligned_cols=115 Identities=15% Similarity=0.150 Sum_probs=99.5
Q ss_pred hhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCC-ChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC
Q 013684 212 LTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARW-CIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD 289 (438)
Q Consensus 212 ~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~w-C~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~ 289 (438)
+|..+|+|++ +.+|+ .+++++++||+++|+||++| |++|+.++|.|.+++++ . +++||+|++| +
T Consensus 20 ~G~~~P~f~l~~~~G~-~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~---------~v~vv~Is~D-~ 85 (175)
T 1xvq_A 20 VGSPAPAFTLTGGDLG-VISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---S---------GATVLCVSKD-L 85 (175)
T ss_dssp TTSBCCCCEEECTTSC-EEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---T---------TCEEEEEESS-C
T ss_pred cCCcCCCeEEECCCCC-EEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---c---------CCEEEEEECC-C
Confidence 6889999999 99999 99999999999999999999 99999999999999988 3 5899999998 4
Q ss_pred HHHHHHHHhcCCCcccccCCchhHHHHHhcCcCce---------eeEEEECCCCcEEEcc
Q 013684 290 QTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGI---------PCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 290 ~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~---------P~~~lid~~G~i~~~~ 340 (438)
.+..++|++++++-.+|+..|....+.+.|++... |+++|||++|+|+++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~~~~ 145 (175)
T 1xvq_A 86 PFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTE 145 (175)
T ss_dssp HHHHTTCC------CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEEEEE
T ss_pred HHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEEEEE
Confidence 56678888887733789988888899999999887 9999999999999874
No 108
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.78 E-value=1e-18 Score=159.87 Aligned_cols=134 Identities=13% Similarity=0.135 Sum_probs=102.0
Q ss_pred hcCCCCCcc-CCC-CCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCC--
Q 013684 213 TNHDRGYLL-GHP-PDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR-- 288 (438)
Q Consensus 213 g~~~~~f~l-~~~-g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~-- 288 (438)
+..+|+|++ +.+ |+ .+++++++||+|||+|||+|||+|+ ++|.|++++++|+++ +++||+|++|.
T Consensus 32 ~~~~pdF~l~d~~~G~-~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~---------g~~Vlgvs~d~f~ 100 (215)
T 2i3y_A 32 KGTIYDYEAIALNKNE-YVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPY---------GLVVLGFPCNQFG 100 (215)
T ss_dssp CCCGGGCEEEBSSSSC-EEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGG---------TEEEEEEECCCST
T ss_pred cCCcCCcEeeeCCCCC-EEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccC---------CeEEEEEEccccC
Confidence 456899999 999 99 9999999999999999999999999 999999999999876 79999999762
Q ss_pred -----CHHHHHHHHh------cCCCcccccCCch--hH----HHHH----h-------cC--------------cCceee
Q 013684 289 -----DQTSFESYFG------TMPWLALPFGDPT--IK----ELTK----Y-------FD--------------VQGIPC 326 (438)
Q Consensus 289 -----~~~~~~~~~~------~~~~~~~p~~~d~--~~----~l~~----~-------~~--------------v~~~P~ 326 (438)
+.+++++|++ +++ ++||+..+. +. .+.. . ++ |...|+
T Consensus 101 ~~e~~~~~~i~~f~~~~~~~~~~~-~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npt 179 (215)
T 2i3y_A 101 KQEPGDNKEILPGLKYVRPGGGFV-PSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFE 179 (215)
T ss_dssp TCCCSCHHHHHHHHHHTSSCTTCC-CSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTC
T ss_pred cCCCCCHHHHHHHHHhccchhccC-ccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCce
Confidence 4577888998 666 788876531 11 1111 1 11 222389
Q ss_pred EEEECCCCcEEEcccchhhhhccccCCCCCHHHHHHHHHHHHHHhc
Q 013684 327 LVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAK 372 (438)
Q Consensus 327 ~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~i~~~~~ 372 (438)
+||||++|+++.+.. | ..++ ++|.+.|+++++
T Consensus 180 tfLID~~G~vv~~~~-------g----~~~~---~~l~~~I~~ll~ 211 (215)
T 2i3y_A 180 KFLVGPDGIPVMRWS-------H----RATV---SSVKTDILAYLK 211 (215)
T ss_dssp EEEECTTSCEEEEEC-------T----TSCH---HHHHHHHHHHGG
T ss_pred EEEECCCCeEEEEeC-------C----CCCH---HHHHHHHHHHHH
Confidence 999999999998742 1 1122 456677776664
No 109
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.78 E-value=1.6e-19 Score=155.54 Aligned_cols=119 Identities=21% Similarity=0.336 Sum_probs=104.0
Q ss_pred hhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCH
Q 013684 39 IMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDL 118 (438)
Q Consensus 39 ~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~ 118 (438)
+|..+|+|+ +.+.+|+.+++++++||+++|+||++||++|+.++|.|.++++++++.+ +.++.|++|.+.
T Consensus 2 ~G~~~p~~~--------l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~--v~vv~v~~d~~~ 71 (151)
T 2f9s_A 2 EGSDAPNFV--------LEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQG--VEIVAVNVGESK 71 (151)
T ss_dssp CCEECCCCE--------EECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCCH
T ss_pred CCCcCCcce--------eEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCC--eEEEEEECCCCH
Confidence 588899999 8999999999999999999999999999999999999999999998765 999999999999
Q ss_pred HHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCccccc
Q 013684 119 NAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
+.++++.+++++....+.+.. ..+.+.|++.++|++++||+ +|+++.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~~ 120 (151)
T 2f9s_A 72 IAVHNFMKSYGVNFPVVLDTD--RQVLDAYDVSPLPTTFLINP---EGKVVKVV 120 (151)
T ss_dssp HHHHHHHHHHTCCSCEEEETT--SHHHHHTTCCSSCEEEEECT---TSEEEEEE
T ss_pred HHHHHHHHHcCCCceEEECCc--hHHHHhcCCCCCCeEEEECC---CCcEEEEE
Confidence 999999987664322222332 67899999999999999999 99988764
No 110
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.78 E-value=3.5e-19 Score=153.35 Aligned_cols=120 Identities=21% Similarity=0.251 Sum_probs=106.4
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDED 117 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~ 117 (438)
.+|..+|+|+ +.+ +|+.+++++++||+++|+||++||++|+.+.|.|.++++++++.+ +.+++|++|.+
T Consensus 4 ~~G~~~P~f~--------l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~--~~~v~v~~d~~ 72 (152)
T 3gl3_A 4 DKGDKAPDFA--------LPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKG--FQVVAVNLDAK 72 (152)
T ss_dssp CTTSBCCCCE--------EEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGT--EEEEEEECCSS
T ss_pred CCCCcCCceE--------eeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCC--eEEEEEECCCC
Confidence 4799999999 889 999999999999999999999999999999999999999999876 99999999999
Q ss_pred HHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 118 LNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
.+.+.++.+++++....+.|.. ..+.+.|++.++|+++|||+ +|+++.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~~~ 123 (152)
T 3gl3_A 73 TGDAMKFLAQVPAEFTVAFDPK--GQTPRLYGVKGMPTSFLIDR---NGKVLLQHV 123 (152)
T ss_dssp HHHHHHHHHHSCCCSEEEECTT--CHHHHHTTCCSSSEEEEECT---TSBEEEEEE
T ss_pred HHHHHHHHHHcCCCCceeECCc--chhHHHcCCCCCCeEEEECC---CCCEEEEEc
Confidence 9999999998775433333443 57899999999999999999 999987654
No 111
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.78 E-value=3.5e-19 Score=157.43 Aligned_cols=118 Identities=14% Similarity=0.161 Sum_probs=101.7
Q ss_pred hhhcCCCCCcc-CC----CC-----Cceeecccc-CCC-EEEEEEecCCChhhhhh-hHHHHHHHHHHHhhhhhcCCCCC
Q 013684 211 LLTNHDRGYLL-GH----PP-----DEKVPVSSL-VGK-TVGLYFSARWCIPCEKF-MPKLLSIYQKIKQNLVEKGDALE 277 (438)
Q Consensus 211 ~~g~~~~~f~l-~~----~g-----~~~~~l~~~-~gk-~vll~F~a~wC~~C~~~-~p~l~~l~~~~~~~~~~~~~~~~ 277 (438)
.+|..+|+|++ +. +| + .++++++ +|| +||++||++|||+|..+ +|.|.+++++|+++
T Consensus 8 ~~g~~aP~f~l~~~~~~~~G~~~~~~-~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~--------- 77 (171)
T 2pwj_A 8 DILSAASNVSLQKARTWDEGVESKFS-TTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAK--------- 77 (171)
T ss_dssp --CCCSSSBCCCSCEECCCSSCTTCC-CEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHT---------
T ss_pred cccCcCCCeEEecccccccCCccCcc-eEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHC---------
Confidence 46779999999 76 57 8 9999996 996 67778999999999999 99999999999876
Q ss_pred CEE-EEEEecCCCHHHHHHHHhcCCC-cccccCCchhHHHHHhcCcCc-----------eeeEEEECCCCcEEEcc
Q 013684 278 DFE-VVFVSTDRDQTSFESYFGTMPW-LALPFGDPTIKELTKYFDVQG-----------IPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 278 ~~~-vv~is~d~~~~~~~~~~~~~~~-~~~p~~~d~~~~l~~~~~v~~-----------~P~~~lid~~G~i~~~~ 340 (438)
+++ |++||.| +.+..++|.++++. ++||++.|...++++.||+.. .|+.++|| +|+|++..
T Consensus 78 g~~~vv~Is~d-~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~I~~~~ 151 (171)
T 2pwj_A 78 GVDSVICVAIN-DPYTVNAWAEKIQAKDAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSERWSAYVV-DGKVKALN 151 (171)
T ss_dssp TCSEEEEEESS-CHHHHHHHHHHTTCTTTSEEEECTTCHHHHHHTCEEECTTTTCCEEECCEEEEEE-TTEEEEEE
T ss_pred CCCEEEEEeCC-CHHHHHHHHHHhCCCCceEEEECCccHHHHHhCCccccccccCCcccceeEEEEE-CCEEEEEE
Confidence 789 9999998 56788999998885 479999999999999999853 56788888 99999874
No 112
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.77 E-value=1.2e-18 Score=163.54 Aligned_cols=119 Identities=15% Similarity=0.186 Sum_probs=105.4
Q ss_pred hhhcCCCCCcc----CCCCCceeeccccCCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEe
Q 013684 211 LLTNHDRGYLL----GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 285 (438)
Q Consensus 211 ~~g~~~~~f~l----~~~g~~~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is 285 (438)
.+|..+|+|++ +.+|+ .+++++++||+++|+|| ++||++|..++|.|.+++++|+++ +++||+|+
T Consensus 63 ~vG~~aPdF~l~~l~d~~G~-~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~---------gv~vv~IS 132 (254)
T 3tjj_A 63 KISKPAPYWEGTAVIDGEFK-ELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI---------NTEVVACS 132 (254)
T ss_dssp CTTSBCCCCEEEEEETTEEE-EEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTT---------TEEEEEEE
T ss_pred CCCCCCCCcEeeeecCCCCc-EEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHc---------CCEEEEEc
Confidence 47999999995 45678 99999999999999999 999999999999999999999866 89999999
Q ss_pred cCCCHHHHHHHHhcC------CCcccccCCchhHHHHHhcCcC------ceeeEEEECCCCcEEEcc
Q 013684 286 TDRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 286 ~d~~~~~~~~~~~~~------~~~~~p~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~ 340 (438)
+| +.+..++|++.. ..+.||+..|....+++.||+. .+|++||||++|+|++..
T Consensus 133 ~D-~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~~ 198 (254)
T 3tjj_A 133 VD-SQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQIT 198 (254)
T ss_dssp SS-CHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred CC-CHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHHHcCCccccCCCccceEEEECCCCeEEEEE
Confidence 98 456777887765 1378999999889999999995 589999999999999874
No 113
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.77 E-value=2.2e-19 Score=165.08 Aligned_cols=122 Identities=12% Similarity=0.162 Sum_probs=106.3
Q ss_pred HHhhccchhHHHHHhhcccccCCCCCEEeccccCCC-EEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC
Q 013684 37 FLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGK-VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD 115 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk-~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D 115 (438)
+.+|..+|+|+ +.+.+|+.+++++++|| ++||+||++||++|+.++|.|.++++++++.+ ++||+|++|
T Consensus 32 l~~G~~aP~f~--------l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~Vs~d 101 (218)
T 3u5r_E 32 ITLGTRAADFV--------LPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQG--LAVVAINSN 101 (218)
T ss_dssp CCTTCBCCCCC--------EECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTT--EEEEEEECS
T ss_pred CCCCCcCCCcE--------eECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCC--cEEEEEECC
Confidence 45799999999 99999999999999999 59999999999999999999999999998876 999999997
Q ss_pred -------CCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 116 -------EDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 116 -------~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
++.+.++++.+++++....+.|.. ..+.+.|++..+|+++|||+ +|+++++..
T Consensus 102 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~--~~~~~~~~v~~~P~~~liD~---~G~i~~~g~ 161 (218)
T 3u5r_E 102 DAQAFPEETLERVGAEVKAYGYGFPYLKDAS--QSVAKAYGAACTPDFFLYDR---ERRLVYHGQ 161 (218)
T ss_dssp CTTTCGGGSHHHHHHHHHHHTCCSCEEECTT--CHHHHHHTCCEESEEEEECT---TCBEEEEEC
T ss_pred cccccccCCHHHHHHHHHHhCCCccEEECCc--cHHHHHcCCCCCCeEEEECC---CCcEEEecc
Confidence 788889999987664322222433 68899999999999999999 999987654
No 114
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.77 E-value=2.4e-18 Score=155.88 Aligned_cols=124 Identities=19% Similarity=0.278 Sum_probs=99.7
Q ss_pred hhhhcCC--CCCcc-CCCCCceeeccccCCCEEEEEEecCCChh-hhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEe
Q 013684 210 NLLTNHD--RGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIP-CEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 285 (438)
Q Consensus 210 ~~~g~~~--~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~-C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is 285 (438)
..+|..+ |+|++ +.+|+ .+++++++||++||+||++||++ |..++|.|.++++++.++. +.+++||+|+
T Consensus 13 ~~~g~~~~~p~f~l~d~~G~-~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~------~~~v~vv~Is 85 (200)
T 2b7k_A 13 RGYGKPSLGGPFHLEDMYGN-EFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKY------GITLQPLFIT 85 (200)
T ss_dssp ---CCCCCCCCCEEEETTSC-EEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHH------CCCCEEEEEE
T ss_pred hccCCCCcCCCEEEEcCCCC-EEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhh------CCceEEEEEE
Confidence 3467775 99999 99999 99999999999999999999997 9999999999999997531 2379999999
Q ss_pred cCC---CHHHHHHHHhcCC--CcccccCCchhHHHHHhcCcC-cee---------------eEEEECCCCcEEEcc
Q 013684 286 TDR---DQTSFESYFGTMP--WLALPFGDPTIKELTKYFDVQ-GIP---------------CLVIIGPEGKTVTKQ 340 (438)
Q Consensus 286 ~d~---~~~~~~~~~~~~~--~~~~p~~~d~~~~l~~~~~v~-~~P---------------~~~lid~~G~i~~~~ 340 (438)
+|. +.+.+++|+++++ |..++...+....+++.|||. +.| ++||||++|+++.+.
T Consensus 86 ~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~ 161 (200)
T 2b7k_A 86 CDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDAL 161 (200)
T ss_dssp SCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEE
T ss_pred CCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEe
Confidence 985 6788999998876 333344445677899999997 444 789999999999874
No 115
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.77 E-value=5.3e-20 Score=160.35 Aligned_cols=120 Identities=18% Similarity=0.173 Sum_probs=96.6
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE 116 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~ 116 (438)
.+|+++|+|+ +.+.+|+.++|++++||+++|+|| ++|||+|+.++|.|+++++++++.+ +++++||.|
T Consensus 5 ~vG~~aPdF~--------l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~--~~~v~vs~d- 73 (157)
T 4g2e_A 5 EIGELAPDFE--------LPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVN--AVVLGISVD- 73 (157)
T ss_dssp CTTSBCCCCE--------EEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCS--SEEEEEESS-
T ss_pred CCCCCCcCeE--------eECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccC--ceEeeeccc-
Confidence 4799999999 999999999999999999999999 9999999999999999999998876 999999998
Q ss_pred CHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcC-----------ccceEEEecCCCCCCCcccccc
Q 013684 117 DLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIE-----------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~-----------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+.+..+++.+++++......|.+ .++++.||+. ..|++||||+ +|+|++...
T Consensus 74 ~~~~~~~~~~~~~~~~p~l~D~~--~~v~~~ygv~~~~~~~~~~~~~~p~tflID~---~G~I~~~~~ 136 (157)
T 4g2e_A 74 PPFSNKAFKEHNKLNFTILSDYN--REVVKKYNVAWEFPALPGYVLAKRAVFVIDK---EGKVRYKWV 136 (157)
T ss_dssp CHHHHHHHHHHTTCCSEEEECTT--SHHHHHTTCEEECTTSTTCEEECEEEEEECT---TSBEEEEEE
T ss_pred chhHHHHHHHHcCCcEEEEEcCC--cHHHHHcCCccccccCCCcceeeeeEEEECC---CCEEEEEEE
Confidence 56778888887664332233544 6889999884 4789999999 999987654
No 116
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.64 E-value=2.1e-20 Score=159.31 Aligned_cols=125 Identities=34% Similarity=0.627 Sum_probs=107.3
Q ss_pred cchhHHHHHhhcccccCCCCCEEeccc-cCCC-EEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHH
Q 013684 42 LSQWYVQQLRRRMTSTKEIGEEVKVSD-LEGK-VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLN 119 (438)
Q Consensus 42 ~~p~f~~~~~~~~~~~~~~g~~v~l~~-~~gk-~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~ 119 (438)
.+|+|+ +.+.+|+.+++++ ++|| +++|+||++||++|+.++|.|.++++++++.+.++.+++|++|.+.+
T Consensus 3 ~~p~~~--------l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~ 74 (143)
T 2lus_A 3 FIQGIK--------LVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSED 74 (143)
Confidence 468888 8999999999999 9999 99999999999999999999999999996544469999999998888
Q ss_pred HHHHhHhcC--CcccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCcccccchhHHh
Q 013684 120 AFNNYRACM--PWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDGVELIY 178 (438)
Q Consensus 120 ~~~~~~~~~--~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~~~~i~ 178 (438)
.+.++++++ +|..+++. .+....+++.|++.++|++++||+ +|+++.+.+...+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~~~~~~~ 131 (143)
T 2lus_A 75 DMFQYMMESHGDWLAIPYR-SGPASNVTAKYGITGIPALVIVKK---DGTLISMNGRGEVQ 131 (143)
Confidence 899999876 46666653 333368999999999999999999 99999887755544
No 117
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.77 E-value=3.4e-19 Score=153.48 Aligned_cols=120 Identities=19% Similarity=0.283 Sum_probs=104.7
Q ss_pred Hhhccch-hHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCC
Q 013684 38 LIMSLSQ-WYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE 116 (438)
Q Consensus 38 ~~g~~~p-~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~ 116 (438)
.+|.++| +|+ +.+.+|+.+++++++||+++|+||++||++|+.+.|.|.++++++++.+ +.++.|+.|.
T Consensus 4 ~~G~~~p~~f~--------l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~--~~~v~v~~d~ 73 (152)
T 2lja_A 4 RSGNPSAASFS--------YPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKD--IHFVSLSCDK 73 (152)
T ss_dssp TTTCCCSSSCE--------EEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSS--EEEEEEECCS
T ss_pred ccCCCCCcccE--------eecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCC--eEEEEEEccC
Confidence 4789999 999 8999999999999999999999999999999999999999999987754 9999999999
Q ss_pred CHHHHHHhHhcCCcccccC-CChHHHHHHhhhcCcCccceEEEecCCCCCCCccccc
Q 013684 117 DLNAFNNYRACMPWLAVPY-SDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~-~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
+.+.+++++++.++...++ .+.. ..+.+.|++.++|+++++|+ +|+++.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~~ 125 (152)
T 2lja_A 74 NKKAWENMVTKDQLKGIQLHMGTD--RTFMDAYLINGIPRFILLDR---DGKIISAN 125 (152)
T ss_dssp CHHHHHHHHHHHTCCSEEEECSSC--THHHHHTTCCSSCCEEEECT---TSCEEESS
T ss_pred cHHHHHHHHHhcCCCCceeecCcc--hhHHHHcCcCCCCEEEEECC---CCeEEEcc
Confidence 9889999998765433222 1332 68899999999999999999 99998764
No 118
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.77 E-value=1.9e-19 Score=156.26 Aligned_cols=122 Identities=12% Similarity=0.097 Sum_probs=101.6
Q ss_pred hhccchhHHHHHhhcccccC--CCCCEEeccccCCCEEEEEEeccCCccchhh-HHHHHHHHHHHhcCCCCEEEEEEecC
Q 013684 39 IMSLSQWYVQQLRRRMTSTK--EIGEEVKVSDLEGKVTALYFSANWYPPCGNF-TGVLVDVYEELRNNGSDFEVVFVSSD 115 (438)
Q Consensus 39 ~g~~~p~f~~~~~~~~~~~~--~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~-~p~l~~l~~~~~~~~~~~~iv~vs~D 115 (438)
.|..+|+|+ +.+ .+|+.+++++++||+++|+||++||++|+.+ +|.|.++++++++.+ +.+++|++|
T Consensus 2 ~g~~aP~f~--------l~~~~~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~--v~~v~v~~~ 71 (158)
T 3eyt_A 2 NAMKAPELQ--------IQQWFNSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDK--VAVLGLHTV 71 (158)
T ss_dssp CCEECCCCC--------EEEEESCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTT--EEEEEEECC
T ss_pred CCCcCCCce--------ehhhhcCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCC--EEEEEEEec
Confidence 478899999 888 3889999999999999999999999999997 999999999998765 999999984
Q ss_pred ------CCHHHHHHhHhcCCcccccCCChHHH---HHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 116 ------EDLNAFNNYRACMPWLAVPYSDLETK---KALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 116 ------~~~~~~~~~~~~~~~~~~~~~d~~~~---~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
++.+.++++++++++....+.+.... ..+++.|++.++|+++|||+ +|+++.+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~~ 135 (158)
T 3eyt_A 72 FEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDK---AGDLRAHHF 135 (158)
T ss_dssp CSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECT---TSEEEEEEE
T ss_pred ccccccCCHHHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCCCCCEEEEECC---CCCEEEEEe
Confidence 58889999999776432222233210 16899999999999999999 999987654
No 119
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.77 E-value=1.4e-19 Score=157.36 Aligned_cols=124 Identities=15% Similarity=0.092 Sum_probs=102.8
Q ss_pred HHhhccchhHHHHHhhcccccC-CCCCEEeccccCCCEEEEEEeccCCccchhh-HHHHHHHHHHHhcCCCCEEEEEEec
Q 013684 37 FLIMSLSQWYVQQLRRRMTSTK-EIGEEVKVSDLEGKVTALYFSANWYPPCGNF-TGVLVDVYEELRNNGSDFEVVFVSS 114 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~~-~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~-~p~l~~l~~~~~~~~~~~~iv~vs~ 114 (438)
.+.|.++|+|+ +.+ .+|+.+++++++||+++|+||++||++|+.+ +|.|.++++++++++ +.+++|++
T Consensus 3 ~~~g~~~p~~~--------~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~--v~~v~v~~ 72 (160)
T 3lor_A 3 SLDNAPLLELD--------VQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQ--VQVIGLHS 72 (160)
T ss_dssp -CTTCCBCCCC--------EEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTT--EEEEEEEC
T ss_pred ccCCCcCCCcc--------cccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCC--cEEEEEec
Confidence 34689999999 888 8999999999999999999999999999995 999999999998765 99999998
Q ss_pred C------CCHHHHHHhHhcCCcccccCCChHH----HHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 115 D------EDLNAFNNYRACMPWLAVPYSDLET----KKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 115 D------~~~~~~~~~~~~~~~~~~~~~d~~~----~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
| ++.+.++++.+.+++......+... ...+.+.|++.++|+++|||+ +|+++.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~~ 138 (160)
T 3lor_A 73 VFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADR---KGRIRQVQF 138 (160)
T ss_dssp CCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECT---TSBEEEEEE
T ss_pred cccccccCCHHHHHHHHHHcCCCCcEEECCccccchhhhHHHhcccCccceEEEECC---CCcEEEEec
Confidence 4 6889999999977643222222221 012889999999999999999 999987644
No 120
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.77 E-value=5.1e-19 Score=152.69 Aligned_cols=121 Identities=22% Similarity=0.318 Sum_probs=104.8
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDED 117 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~ 117 (438)
.+|.++|+|+ +.+.+|+.+++++++||+++|+||++||++|+.++|.|.++++++++.+ +.+++|++|.+
T Consensus 3 ~~G~~~p~~~--------l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~--~~~v~v~~d~~ 72 (154)
T 3kcm_A 3 LEENPAPDFT--------LNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKP--FRMLCVSIDEG 72 (154)
T ss_dssp CTTSBCCCCE--------EECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSS--EEEEEEECCTT
T ss_pred CCCCCCCCeE--------EEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCC--eEEEEEEcCCc
Confidence 5799999999 9999999999999999999999999999999999999999999998765 99999999987
Q ss_pred -HHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 118 -LNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 118 -~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
.+.++++.+.+++....+.+.. ..+.+.|++.++|+++|||+ +|+++.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~~~ 124 (154)
T 3kcm_A 73 GKVAVEEFFRKTGFTLPVLLDAD--KRVGKLYGTTGVPETFVIDR---HGVILKKVV 124 (154)
T ss_dssp HHHHHHHHHHHHCCCCCEEECTT--CHHHHHHTCCSBCEEEEECT---TSBEEEEEE
T ss_pred chHHHHHHHHHcCCCeeEEecCc--hHHHHHhCCCCCCeEEEECC---CCcEEEEEc
Confidence 7888888886654322222333 67899999999999999999 999987643
No 121
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.77 E-value=5.1e-18 Score=175.29 Aligned_cols=66 Identities=21% Similarity=0.388 Sum_probs=58.0
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+++++|+|||+||++|+.+.|.+.++++++++.+ +.++.|+.+.. ..+++.|+
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~--v~~~~vd~~~~------------------------~~l~~~~~ 83 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKN--ITLAQIDCTEN------------------------QDLCMEHN 83 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTT--CEEEEEETTTC------------------------HHHHHHTT
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCC--eEEEEEECCCC------------------------HHHHHhcC
Confidence 57999999999999999999999999999997653 88888876644 67899999
Q ss_pred cCccceEEEecC
Q 013684 150 IEGIPCLVVLQP 161 (438)
Q Consensus 150 v~~~P~~~lvd~ 161 (438)
|.++||++++..
T Consensus 84 v~~~Pt~~~~~~ 95 (504)
T 2b5e_A 84 IPGFPSLKIFKN 95 (504)
T ss_dssp CCSSSEEEEEET
T ss_pred CCcCCEEEEEeC
Confidence 999999999973
No 122
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.76 E-value=2.8e-18 Score=156.19 Aligned_cols=116 Identities=9% Similarity=0.065 Sum_probs=92.3
Q ss_pred hcCCCCCcc-CCC-CCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC---
Q 013684 213 TNHDRGYLL-GHP-PDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD--- 287 (438)
Q Consensus 213 g~~~~~f~l-~~~-g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d--- 287 (438)
...+|+|++ +.+ |+ .+++++++||+|||+|||+|||+| .++|.|++++++|+++ +++||+|++|
T Consensus 14 ~~~~pdF~l~d~~~G~-~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~---------g~~vlgvs~d~f~ 82 (207)
T 2r37_A 14 SGTIYEYGALTIDGEE-YIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPF---------GLVILGFPCNQFG 82 (207)
T ss_dssp -CCGGGCEEEBTTSSC-EEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGG---------TEEEEEEECCCBT
T ss_pred cCccCCeEeeeCCCCC-EEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC---------CEEEEEEECcccC
Confidence 457899999 999 99 999999999999999999999999 7999999999999876 7999999976
Q ss_pred ----CCHHHHHHHHh------cCCCcccccCCch--h----HHHH----Hhc-------C--------------cCceee
Q 013684 288 ----RDQTSFESYFG------TMPWLALPFGDPT--I----KELT----KYF-------D--------------VQGIPC 326 (438)
Q Consensus 288 ----~~~~~~~~~~~------~~~~~~~p~~~d~--~----~~l~----~~~-------~--------------v~~~P~ 326 (438)
.+.+++++|++ +++ +.||+..+. + ..+. ... + |...|+
T Consensus 83 ~~e~~~~~~i~~f~~~~~~~~~~~-~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~t 161 (207)
T 2r37_A 83 KQEPGENSEILPTLKYVRPGGGFV-PNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFE 161 (207)
T ss_dssp TCCCSCHHHHHHHHHHTSSCTTCC-CSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTC
T ss_pred cCCCCCHHHHHHHHHhcchhhccC-ccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccce
Confidence 24577888998 666 788876431 1 1111 111 1 222389
Q ss_pred EEEECCCCcEEEcc
Q 013684 327 LVIIGPEGKTVTKQ 340 (438)
Q Consensus 327 ~~lid~~G~i~~~~ 340 (438)
+||||++|+++.+.
T Consensus 162 tflID~~G~i~~~~ 175 (207)
T 2r37_A 162 KFLVGPDGIPIMRW 175 (207)
T ss_dssp EEEECTTSCEEEEE
T ss_pred EEEECCCCcEEEEE
Confidence 99999999999874
No 123
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.76 E-value=5.7e-19 Score=164.78 Aligned_cols=119 Identities=13% Similarity=0.139 Sum_probs=104.2
Q ss_pred hhhcCCCCCcc-CC-CCC-ceeeccc-cCCCEEEEEEe-cCCChhhh-hhhHHHHHHHHHHHhhhhhcCCCCCCE-EEEE
Q 013684 211 LLTNHDRGYLL-GH-PPD-EKVPVSS-LVGKTVGLYFS-ARWCIPCE-KFMPKLLSIYQKIKQNLVEKGDALEDF-EVVF 283 (438)
Q Consensus 211 ~~g~~~~~f~l-~~-~g~-~~~~l~~-~~gk~vll~F~-a~wC~~C~-~~~p~l~~l~~~~~~~~~~~~~~~~~~-~vv~ 283 (438)
.+|..+|+|++ +. +|+ +.+++++ ++||+++|+|| ++|||+|. .++|.|++++++|+++ ++ +|++
T Consensus 4 ~~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~---------~~~~vv~ 74 (241)
T 1nm3_A 4 MEGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKY---------GVDDILV 74 (241)
T ss_dssp CTTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHT---------TCCEEEE
T ss_pred cCCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC---------CCCEEEE
Confidence 36889999999 75 452 1589999 89999999999 99999999 9999999999999876 89 9999
Q ss_pred EecCCCHHHHHHHHhcCCCcccccCCchhHHHHHhcCcC-----------ceeeEEEECCCCcEEEcc
Q 013684 284 VSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 284 is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~~ 340 (438)
||.| +.+..++|.++++...||+..|.+.++++.||+. ..|+++|| ++|+|++..
T Consensus 75 is~d-~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~~~ 140 (241)
T 1nm3_A 75 VSVN-DTFVMNAWKEDEKSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEKMF 140 (241)
T ss_dssp EESS-CHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEEEE
T ss_pred EEcC-CHHHHHHHHHhcCCCceEEEECCCcHHHHHhCceeecccccCcccceeEEEEE-ECCEEEEEE
Confidence 9998 4678899999888445999999999999999986 45899999 999999874
No 124
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.76 E-value=2.3e-18 Score=187.14 Aligned_cols=181 Identities=12% Similarity=0.120 Sum_probs=124.8
Q ss_pred CCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCc
Q 013684 71 GKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDI 150 (438)
Q Consensus 71 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v 150 (438)
+++++|.||++||++|+.+.|.+.++++.+++. +.++.|+.+.. ..+++.|+|
T Consensus 563 ~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~---v~~~~vd~~~~------------------------~~l~~~~~v 615 (780)
T 3apo_A 563 DEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGL---INVGSVDCGQY------------------------HSFCTQENV 615 (780)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEETTTT------------------------HHHHHHTTC
T ss_pred CCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCC---eEEEEEECcch------------------------HHHHHHcCC
Confidence 578999999999999999999999999999753 66665554422 678899999
Q ss_pred CccceEEEecCCCCCCCcccccchhHHhhhCCCCccCChhHHHHHHHHHHhhhhHHHHHhhhhcCCCCCccCCCCCceee
Q 013684 151 EGIPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRGYLLGHPPDEKVP 230 (438)
Q Consensus 151 ~~~P~~~lvd~~~~~G~v~~~~~~~~i~~~~~~a~p~~~e~l~~L~~~~~~~~~~~~~~~~~g~~~~~f~l~~~g~~~~~ 230 (438)
.++|+++++.. ++..... .. .+ .+...+.+.+..+... ..+......++. .+.
T Consensus 616 ~~~Pti~~~~~---~~~~~~~-~~----~y--~g~~~~~~~l~~fi~~----------------~~~~~v~~l~~~-~~~ 668 (780)
T 3apo_A 616 QRYPEIRFYPQ---KSSKAYQ-YH----SY--NGWNRDAYSLRSWGLG----------------FLPQASIDLTPQ-TFN 668 (780)
T ss_dssp CSSSEEEEECC---CSSSCCS-CE----EC--CCSCCSHHHHHHHHHT----------------TSCCCSEEECHH-HHH
T ss_pred CCCCeEEEEcC---CCcCccc-hh----hc--CCCCCCHHHHHHHHhh----------------hcccccccCCHH-HHH
Confidence 99999999985 3321000 00 00 0011222222222211 111111133333 331
Q ss_pred -ccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCC
Q 013684 231 -VSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGD 309 (438)
Q Consensus 231 -l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~ 309 (438)
.-.-.|++++|+|||+||++|+.+.|.+.++++++++ ++.++.|+++..
T Consensus 669 ~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~----------~~~~~~vd~~~~-------------------- 718 (780)
T 3apo_A 669 EKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKG----------KVRAGKVDCQAY-------------------- 718 (780)
T ss_dssp HHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT----------TCEEEEEETTTC--------------------
T ss_pred HHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC----------CceEEEEECCCC--------------------
Confidence 1112478999999999999999999999999999864 378888888755
Q ss_pred chhHHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 310 PTIKELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 310 d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
..+++.|+|.++||++++ ++|+++.+
T Consensus 719 ---~~~~~~~~v~~~Pt~~~~-~~g~~~~~ 744 (780)
T 3apo_A 719 ---PQTCQKAGIKAYPSVKLY-QYERAKKS 744 (780)
T ss_dssp ---HHHHHHTTCCSSSEEEEE-EEETTTTE
T ss_pred ---HHHHHhcCCCcCCEEEEE-cCCCcccc
Confidence 568899999999999999 88876543
No 125
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.76 E-value=1.4e-18 Score=151.96 Aligned_cols=118 Identities=19% Similarity=0.319 Sum_probs=104.3
Q ss_pred HHHHhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEec
Q 013684 35 LRFLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSS 114 (438)
Q Consensus 35 ~~~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~ 114 (438)
....+|..+|+|+ +.+.+|+.+++++++||+++|+||++||++|+.++|.|.+++++++ + +.++.|++
T Consensus 9 ~~~~~g~~~p~~~--------l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~--v~vv~i~~ 76 (165)
T 3ha9_A 9 HSEEVLEREASFS--------LTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--E--ISVIAIDF 76 (165)
T ss_dssp HHHHHHHHHHCCC--------EEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--T--EEEEEEEC
T ss_pred ccccccCcCCCCE--------eecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--C--cEEEEEEe
Confidence 4556899999999 9999999999999999999999999999999999999999999986 3 99999999
Q ss_pred C------------------CCHHHHHHhHhcCCccccc-CCChHHHHHHhhhcCcCccceEEEecCCCCCCCccc
Q 013684 115 D------------------EDLNAFNNYRACMPWLAVP-YSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATL 170 (438)
Q Consensus 115 D------------------~~~~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~ 170 (438)
| .+.+.++++.+++++..++ +.+ ...+.+.|++.++|+++|||+ +|+++.
T Consensus 77 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---~~~~~~~~~v~~~P~~~lid~---~G~i~~ 145 (165)
T 3ha9_A 77 WTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIMVMD---DGSLVEKFNVRSIDYIVIMDK---SSNVLY 145 (165)
T ss_dssp CSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSEEEEC---CSHHHHHTTCCSSSEEEEEET---TCCEEE
T ss_pred cccccccccccccccCCCCCCHHHHHHHHHHcCCCCeeEEeC---hHHHHHHhCCCCceEEEEEcC---CCcEEE
Confidence 9 7999999999977652222 223 278999999999999999999 999987
No 126
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.76 E-value=1.2e-18 Score=152.01 Aligned_cols=120 Identities=23% Similarity=0.310 Sum_probs=102.9
Q ss_pred HHhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCC
Q 013684 37 FLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE 116 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~ 116 (438)
..+|.++|+|+ +.+.+|+.+++++++||+++|+||++||++|+.+.|.|.++++++++.+ +.++.|++|.
T Consensus 8 ~~~g~~~p~~~--------l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~--v~~v~v~~d~ 77 (165)
T 3or5_A 8 DARPTPAPSFS--------GVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRG--FTFVGIAVNE 77 (165)
T ss_dssp CCCCCBCCCCE--------EECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTT--EEEEEEECSC
T ss_pred hcCCCCCCCce--------eeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCC--eEEEEEECCC
Confidence 34789999999 8999999999999999999999999999999999999999999998765 9999999999
Q ss_pred CHHHHHHhHhcCCcccccCCChHHHHHHhhhc------CcCccceEEEecCCCCCCCccccc
Q 013684 117 DLNAFNNYRACMPWLAVPYSDLETKKALNRKF------DIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~------~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
+.+.++++.+++++....+.+. ..+.+.| ++.++|+++|||+ +|+++.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~P~~~lid~---~G~i~~~~ 133 (165)
T 3or5_A 78 QLPNVKNYMKTQGIIYPVMMAT---PELIRAFNGYIDGGITGIPTSFVIDA---SGNVSGVI 133 (165)
T ss_dssp CHHHHHHHHHHHTCCSCEEECC---HHHHHHHHTTSTTCSCSSSEEEEECT---TSBEEEEE
T ss_pred CHHHHHHHHHHcCCCCceEecC---HHHHHHHhhhhccCCCCCCeEEEECC---CCcEEEEE
Confidence 9999999998665332222232 3566666 8999999999999 99998664
No 127
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.76 E-value=9.5e-19 Score=153.85 Aligned_cols=119 Identities=24% Similarity=0.331 Sum_probs=102.3
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChh-hhhhhHHHHHHHHHHHhhhhhcCCCC-CCEEEEEEecC
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIP-CEKFMPKLLSIYQKIKQNLVEKGDAL-EDFEVVFVSTD 287 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~-C~~~~p~l~~l~~~~~~~~~~~~~~~-~~~~vv~is~d 287 (438)
+.|..+|+|++ +.+| .+++++++||+++|+||++||++ |+.++|.|.+++++|+++ + .+++||+|++|
T Consensus 11 ~~G~~~p~f~l~~~~g--~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~-------~~~~v~vv~is~d 81 (172)
T 2k6v_A 11 LLNPKPVDFALEGPQG--PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPK-------AQERVQVIFVSVD 81 (172)
T ss_dssp EEEEEECCCEEECSSS--EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHH-------HHTTEEEEEEESC
T ss_pred ccCCCCCCeEEEcCCC--CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhh-------ccCCEEEEEEEEC
Confidence 46788999999 9988 79999999999999999999997 999999999999988753 1 26999999998
Q ss_pred C---CHHHHHHHHhcCCCcccccCCchh---HHHHHhcCc---------------CceeeEEEECCCCcEEEcc
Q 013684 288 R---DQTSFESYFGTMPWLALPFGDPTI---KELTKYFDV---------------QGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 288 ~---~~~~~~~~~~~~~~~~~p~~~d~~---~~l~~~~~v---------------~~~P~~~lid~~G~i~~~~ 340 (438)
. +.+.+++|+++++ +.+|+..|.. ..+++.|++ .++|+++||| +|+++.+.
T Consensus 82 ~~~d~~~~~~~~~~~~~-~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~ 153 (172)
T 2k6v_A 82 PERDPPEVADRYAKAFH-PSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLY 153 (172)
T ss_dssp TTTCCHHHHHHHHHHHC-TTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEE
T ss_pred CCCCCHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEE
Confidence 4 4678899999887 6788877765 578888774 5789999999 99999874
No 128
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.75 E-value=5.2e-19 Score=156.95 Aligned_cols=119 Identities=16% Similarity=0.142 Sum_probs=103.6
Q ss_pred HHHhhccchhHHHHHhhcccccCCCC--CEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEe
Q 013684 36 RFLIMSLSQWYVQQLRRRMTSTKEIG--EEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVS 113 (438)
Q Consensus 36 ~~~~g~~~p~f~~~~~~~~~~~~~~g--~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs 113 (438)
.+.+|.++|+|+ +.+.+| +.+++++++||+++|+||++||++|+.++|.|++++++ + +++++|+
T Consensus 29 ~~~~G~~~P~f~--------l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~--v~vv~vs 94 (176)
T 3kh7_A 29 SALIGKPFPAFD--------LPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----G--VVIYGIN 94 (176)
T ss_dssp TTTTTSBCCCCE--------EEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----T--CEEEEEE
T ss_pred ccccCCcCCCcE--------ecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----C--CEEEEEe
Confidence 346899999999 899999 88999999999999999999999999999999998876 3 9999999
Q ss_pred cCCCHHHHHHhHhcCCccccc-CCChHHHHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 114 SDEDLNAFNNYRACMPWLAVP-YSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 114 ~D~~~~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+|++.+.+.++++++++.... +.|.. ..+.+.|++.++|+++|||+ +|+++.+..
T Consensus 95 ~~d~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~~~ 150 (176)
T 3kh7_A 95 YKDDNAAAIKWLNELHNPYLLSISDAD--GTLGLDLGVYGAPETYLIDK---QGIIRHKIV 150 (176)
T ss_dssp ESCCHHHHHHHHHHTTCCCSEEEEETT--CHHHHHHTCCSSCEEEEECT---TCBEEEEEE
T ss_pred CCCCHHHHHHHHHHcCCCCceEEECCc--chHHHHcCCCCCCeEEEECC---CCeEEEEEc
Confidence 999999999999988754332 22333 68899999999999999999 999987643
No 129
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.75 E-value=9.2e-19 Score=149.00 Aligned_cols=121 Identities=17% Similarity=0.284 Sum_probs=102.1
Q ss_pred HHHhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC
Q 013684 36 RFLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD 115 (438)
Q Consensus 36 ~~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D 115 (438)
...+|..+|+|+ +.+.+|+.+++++ +||+++|+||++||++|+.++|.|.++++++++.+ +.++.|++|
T Consensus 8 ~~~~g~~~p~~~--------l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~--~~~v~v~~d 76 (145)
T 3erw_A 8 EEKQPAVPAVFL--------MKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDS--VKLVTVNLV 76 (145)
T ss_dssp ----CCSCCEEE--------EECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSS--EEEEEEECG
T ss_pred cccCCCcCCCce--------eecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCC--EEEEEEEcc
Confidence 456899999999 9999999999999 99999999999999999999999999999997654 999999998
Q ss_pred C---CHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCccccc
Q 013684 116 E---DLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 116 ~---~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
. +.+.++++.+.+++....+.+.. ..+++.|++.++|+++++|+ +|+++.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~~ 131 (145)
T 3erw_A 77 NSEQNQQVVEDFIKANKLTFPIVLDSK--GELMKEYHIITIPTSFLLNE---KGEIEKTK 131 (145)
T ss_dssp GGSSCHHHHHHHHHHTTCCSCEEECSS--SHHHHHTTCCEESEEEEECT---TCCEEEEE
T ss_pred CCcCCHHHHHHHHHHcCCceeEEEcCc--hhHHHhcCcCccCeEEEEcC---CCcEEEEE
Confidence 5 88999999987764322222333 68899999999999999999 99998654
No 130
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.75 E-value=5e-18 Score=157.21 Aligned_cols=118 Identities=13% Similarity=0.154 Sum_probs=103.4
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCC-EEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGK-TVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 287 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk-~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d 287 (438)
.+|..+|+|++ +.+| .+++++++|| +++|+|| ++|||+|..+++.|.+++++|+++ +++||+||+|
T Consensus 4 ~iG~~aPdF~l~~~~G--~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~---------~v~vigIS~D 72 (233)
T 2v2g_A 4 TLGEVFPNFEADSTIG--KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR---------GVKLIALSCD 72 (233)
T ss_dssp CTTCBCCCCEEEETTC--CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT---------TEEEEEEESS
T ss_pred CCCCCCCCcEEecCCC--CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc---------CCEEEEEcCC
Confidence 46899999999 8888 5999999998 9999998 899999999999999999999876 8999999998
Q ss_pred CCHHHHHHHHh------cCC-CcccccCCchhHHHHHhcCcC------------ceeeEEEECCCCcEEEcc
Q 013684 288 RDQTSFESYFG------TMP-WLALPFGDPTIKELTKYFDVQ------------GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 288 ~~~~~~~~~~~------~~~-~~~~p~~~d~~~~l~~~~~v~------------~~P~~~lid~~G~i~~~~ 340 (438)
. .+..++|++ ..+ .+.||+..|...++++.||+. .+|++||||++|+|+...
T Consensus 73 ~-~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~ 143 (233)
T 2v2g_A 73 N-VADHKEWSEDVKCLSGVKGDMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSI 143 (233)
T ss_dssp C-HHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEE
T ss_pred C-HHHHHHHHHHHHHhhCcccCCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEE
Confidence 4 455666666 442 478999999999999999985 589999999999999874
No 131
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.75 E-value=5.5e-18 Score=153.68 Aligned_cols=122 Identities=19% Similarity=0.241 Sum_probs=104.6
Q ss_pred HHhhhhcCCCCCcc----CCCCCceeeccccCCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEE
Q 013684 208 LINLLTNHDRGYLL----GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVV 282 (438)
Q Consensus 208 ~~~~~g~~~~~f~l----~~~g~~~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv 282 (438)
+...+|.++|||++ +.+++ +++|++++||+++|+|| +.|||.|..+++.+++.+++|++. +++|+
T Consensus 21 M~~~VG~~APdF~l~a~~d~~~~-~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~---------g~~vi 90 (216)
T 3sbc_A 21 MVAQVQKQAPTFKKTAVVDGVFD-EVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQ---------GAQVL 90 (216)
T ss_dssp -CCCTTSBCCCCCEEEEETTEEE-EECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHT---------TEEEE
T ss_pred chhhcCCcCCCCCCcceECCCCc-EEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccC---------CceEE
Confidence 44568999999986 55667 99999999999999999 899999999999999999999977 89999
Q ss_pred EEecCCCHHHHHHHHhcC------CCcccccCCchhHHHHHhcCcC------ceeeEEEECCCCcEEEcc
Q 013684 283 FVSTDRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ------GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 283 ~is~d~~~~~~~~~~~~~------~~~~~p~~~d~~~~l~~~~~v~------~~P~~~lid~~G~i~~~~ 340 (438)
+||+| +....++|.... ..+.||++.|.+.++++.|||- ..+.+||||++|+|++..
T Consensus 91 giS~D-s~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~ 159 (216)
T 3sbc_A 91 FASTD-SEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHIT 159 (216)
T ss_dssp EEESS-CHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred EeecC-chhhHHHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEEEE
Confidence 99998 555666666533 2478999999999999999982 468999999999998864
No 132
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.75 E-value=2.3e-18 Score=151.97 Aligned_cols=124 Identities=21% Similarity=0.217 Sum_probs=104.2
Q ss_pred Hhhccch-hHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCc-cchhhHHHHHHHHHHHhcCCCCEEEEEEecC
Q 013684 38 LIMSLSQ-WYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYP-PCGNFTGVLVDVYEELRNNGSDFEVVFVSSD 115 (438)
Q Consensus 38 ~~g~~~p-~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~-~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D 115 (438)
.+|.++| +|+ +.+.+|+.+++++++||+++|+||++||+ +|..++|.|+++++++++.+.++++|+|++|
T Consensus 2 ~~G~~~P~~f~--------l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d 73 (170)
T 3me7_A 2 SLGTYVPGDIT--------LVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFD 73 (170)
T ss_dssp CTTCBCCTTCE--------EEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECC
T ss_pred CCCCcCCCCeE--------EEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECC
Confidence 3799999 999 99999999999999999999999999998 6999999999999999875567999999998
Q ss_pred --CCHHHHHHhHhcCC-----cccccCCChHHHHHHhhhcC---------cCccceEEEecCCCCCCCccccc
Q 013684 116 --EDLNAFNNYRACMP-----WLAVPYSDLETKKALNRKFD---------IEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 116 --~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~l~~~~~---------v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
++.+.+++|.++++ |..+...+.+....+++.|+ +...|+++|||+ +|+++...
T Consensus 74 ~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~---~G~i~~~~ 143 (170)
T 3me7_A 74 PKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSP---ELQIKDYI 143 (170)
T ss_dssp TTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECT---TSBEEEEE
T ss_pred CCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECC---CCeEEEEE
Confidence 57788899988765 33322235455578888866 456789999999 99998653
No 133
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.74 E-value=1.9e-18 Score=148.96 Aligned_cols=121 Identities=20% Similarity=0.249 Sum_probs=102.6
Q ss_pred HHhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC-
Q 013684 37 FLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD- 115 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D- 115 (438)
.++|..+|+|+ +.+.+|+.+++++++||+++|+||++||++|+.+.|.|.++++++++.+ +.+++|+.|
T Consensus 2 ~~~G~~~p~~~--------l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~v~~~~ 71 (153)
T 2l5o_A 2 SLDSKTAPAFS--------LPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKN--FQVLAVAQPI 71 (153)
T ss_dssp --CCTTCCSCE--------EECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTT--EEEEEEECTT
T ss_pred CCCCCCCCCcE--------eecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCC--eEEEEEecCC
Confidence 35799999999 9999999999999999999999999999999999999999999998865 999999985
Q ss_pred CCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCccccc
Q 013684 116 EDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
++.+.++++.+.+++......+.. ..+.+.|++.++|++++||+ +|+++.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~i~~~P~~~lid~---~G~i~~~~ 123 (153)
T 2l5o_A 72 DPIESVRQYVKDYGLPFTVMYDAD--KAVGQAFGTQVYPTSVLIGK---KGEILKTY 123 (153)
T ss_dssp SCHHHHHHHHHHTTCCSEEEECSS--CHHHHHHTCCSSSEEEEECS---SSCCCEEE
T ss_pred CCHHHHHHHHHHcCCCceEEcCch--HHHHHHcCCCccCeEEEECC---CCcEEEEE
Confidence 567788889887764322222332 57899999999999999999 99987654
No 134
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.74 E-value=2.1e-19 Score=157.76 Aligned_cols=120 Identities=14% Similarity=0.190 Sum_probs=102.6
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEecccc--CCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEec
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDL--EGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSS 114 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~--~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~ 114 (438)
.+|+++|+|+ +.+.+|+.++|+++ +||+++|+|| ++|||+|+.++|.|+++++++++.| +++++||.
T Consensus 6 ~vG~~aPdF~--------l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~--v~vv~is~ 75 (164)
T 4gqc_A 6 ELGEKAPDFT--------LPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKAN--AEVLAISV 75 (164)
T ss_dssp CTTSBCCCCE--------EEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSS--SEEEEEES
T ss_pred cCCCCCcCcE--------eECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccC--ceEEEecC
Confidence 4899999999 99999999999998 8999999888 9999999999999999999999876 99999999
Q ss_pred CCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcC----------ccceEEEecCCCCCCCcccccc
Q 013684 115 DEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIE----------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 115 D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~----------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
| +.+..+++.++++.......|.+ .++++.||+. ..|++||||+ +|+|++...
T Consensus 76 d-~~~~~~~~~~~~~~~fp~l~D~~--~~v~~~ygv~~~~~~~~~~~~~p~tflID~---~G~I~~~~~ 138 (164)
T 4gqc_A 76 D-SPWCLKKFKDENRLAFNLLSDYN--REVIKLYNVYHEDLKGLKMVAKRAVFIVKP---DGTVAYKWV 138 (164)
T ss_dssp S-CHHHHHHHHHHTTCCSEEEECTT--SHHHHHTTCEEEEETTEEEEECCEEEEECT---TSBEEEEEE
T ss_pred C-CHHHHHHHHHhcCcccceeecCc--hHHHHHcCCcccccccCcCCeeeEEEEECC---CCEEEEEEE
Confidence 7 66778888887664332233554 6899999984 4789999999 999987654
No 135
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.74 E-value=2.3e-18 Score=153.48 Aligned_cols=121 Identities=17% Similarity=0.121 Sum_probs=101.5
Q ss_pred HhhccchhHHHHHhhcccccCC--CCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCE------EE
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKE--IGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDF------EV 109 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~--~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~------~i 109 (438)
..|.++|+|+ +.+. +|+.+++++++||++||+||++||++|+.++|.|.++++++++++ + ++
T Consensus 32 ~~g~~~p~f~--------l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~--~~~~~~v~~ 101 (183)
T 3lwa_A 32 ADRQQLPDIG--------GDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAG--NGDTPGGTV 101 (183)
T ss_dssp GGCCCCCCCE--------EEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC-----CCSEEE
T ss_pred ccCCCCCcee--------ccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcC--CCccCCcEE
Confidence 4688899999 8999 999999999999999999999999999999999999999999876 6 99
Q ss_pred EEEecCC-CHHHHHHhHhcCCcccccCCChHHHHHHhhhc---CcCccceEEEecCCCCCCCcccccc
Q 013684 110 VFVSSDE-DLNAFNNYRACMPWLAVPYSDLETKKALNRKF---DIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 110 v~vs~D~-~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~---~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+.|++|. +.+.++++.+++++....+.+.. ..+.+.| ++..+|+++|||+ +|+++.+..
T Consensus 102 v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~~ 164 (183)
T 3lwa_A 102 LGINVRDYSRDIAQDFVTDNGLDYPSIYDPP--FMTAASLGGVPASVIPTTIVLDK---QHRPAAVFL 164 (183)
T ss_dssp EEEECSCCCHHHHHHHHHHTTCCSCEEECTT--CGGGGGTTTCCTTCCSEEEEECT---TSCEEEEEC
T ss_pred EEEECCCCCHHHHHHHHHHcCCCccEEECCc--chHHHHhccCCCCCCCeEEEECC---CCcEEEEEc
Confidence 9999998 88999999987654322222333 4555555 6899999999999 999987643
No 136
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.74 E-value=2.3e-18 Score=148.37 Aligned_cols=108 Identities=16% Similarity=0.250 Sum_probs=91.2
Q ss_pred CCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCc--ccccCC
Q 013684 59 EIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPW--LAVPYS 136 (438)
Q Consensus 59 ~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~--~~~~~~ 136 (438)
.+|+.+++++++||+++|+||++||++|+.++|.|.++++++++.+ +++++|++| +.+.+.++++.++. ..+..
T Consensus 12 ~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~--v~vv~v~~d-~~~~~~~~~~~~~~~~~~~~~- 87 (151)
T 3raz_A 12 KDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGS--VDMVGIALD-TSDNIGNFLKQTPVSYPIWRY- 87 (151)
T ss_dssp TTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTT--EEEEEEESS-CHHHHHHHHHHSCCSSCEEEE-
T ss_pred cCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCC--eEEEEEECC-ChHHHHHHHHHcCCCCceEec-
Confidence 7999999999999999999999999999999999999999996654 999999997 56778899987653 33322
Q ss_pred ChHHHHHHhhhcC--cCccceEEEecCCCCCCCcccccc
Q 013684 137 DLETKKALNRKFD--IEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 137 d~~~~~~l~~~~~--v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
.......+.+.|+ +.++|+++|||+ +|+++.+..
T Consensus 88 ~~~~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~~ 123 (151)
T 3raz_A 88 TGANSRNFMKTYGNTVGVLPFTVVEAP---KCGYRQTIT 123 (151)
T ss_dssp CCSCHHHHHHTTTCCSCCSSEEEEEET---TTTEEEECC
T ss_pred CccchHHHHHHhCCccCCCCEEEEECC---CCcEEEEEC
Confidence 2222378999999 999999999999 999987643
No 137
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.74 E-value=2.4e-18 Score=151.62 Aligned_cols=125 Identities=13% Similarity=0.156 Sum_probs=101.2
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCc-cchhhHHHHHHHHHHHhcCCCCEEEEEEecC-
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYP-PCGNFTGVLVDVYEELRNNGSDFEVVFVSSD- 115 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~-~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D- 115 (438)
.+|..+|+|+ +.+.+|+.+++++++||+++|+||++||+ +|+.++|.|.++++++++.+.+++||+|++|
T Consensus 8 ~~g~~~p~f~--------l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~ 79 (174)
T 1xzo_A 8 PLNYEVEPFT--------FQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDP 79 (174)
T ss_dssp CCCEECCCCE--------EECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred ccccccCCcE--------EEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCC
Confidence 4789999999 99999999999999999999999999999 9999999999999999987656999999998
Q ss_pred --CCHHHHHHhHhcCCccc---ccCCC--hHHHHHHhh------------hcCcCccceEEEecCCCCCCCcccccc
Q 013684 116 --EDLNAFNNYRACMPWLA---VPYSD--LETKKALNR------------KFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 116 --~~~~~~~~~~~~~~~~~---~~~~d--~~~~~~l~~------------~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
++.+.+++|.++++... ....+ ......+.. .|++..+|+++|||+ +|+++.+..
T Consensus 80 ~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~---~G~i~~~~~ 153 (174)
T 1xzo_A 80 ENDKPKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGP---DGKVLKDYN 153 (174)
T ss_dssp TTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECT---TSEEEEEEE
T ss_pred CCCCHHHHHHHHHHcCCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECC---CCeEEEEEc
Confidence 57788999998776432 11123 221122221 146788999999999 999987643
No 138
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.74 E-value=2.5e-18 Score=150.11 Aligned_cols=122 Identities=17% Similarity=0.165 Sum_probs=102.6
Q ss_pred HHhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEec-cCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC
Q 013684 37 FLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSA-NWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD 115 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D 115 (438)
+.+|.++|+|+ .+ +.+.+|+.+++++++||+++|+||+ +||++|+.++|.|+++++++++.| ++|++|+.|
T Consensus 7 l~~G~~~P~f~----~~--l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~--~~vv~vs~d 78 (163)
T 3gkn_A 7 AVLELPAATFD----LP--LSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAG--AKILGVSRD 78 (163)
T ss_dssp CCCCCCGGGGG----CC--EECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTT--CEEEEEESS
T ss_pred cccCCcCCCcc----cc--ccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 45789999887 11 5689999999999999999999998 999999999999999999999876 999999998
Q ss_pred CCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCc------------cceEEEecCCCCCCCccccc
Q 013684 116 EDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEG------------IPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~------------~P~~~lvd~~~~~G~v~~~~ 172 (438)
+.+.+++|.++++.....+.|.+ ..+.+.|++.. +|+++|||+ +|+++...
T Consensus 79 -~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~---~G~i~~~~ 141 (163)
T 3gkn_A 79 -SVKSHDNFCAKQGFAFPLVSDGD--EALCRAFDVIKEKNMYGKQVLGIERSTFLLSP---EGQVVQAW 141 (163)
T ss_dssp -CHHHHHHHHHHHCCSSCEEECTT--CHHHHHTTCEEEEEETTEEEEEECCEEEEECT---TSCEEEEE
T ss_pred -CHHHHHHHHHHhCCCceEEECCc--HHHHHHhCCccccccccccccCcceEEEEECC---CCeEEEEE
Confidence 78888889886653322222433 68889999977 999999999 99998654
No 139
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.74 E-value=1e-18 Score=155.80 Aligned_cols=125 Identities=9% Similarity=0.009 Sum_probs=95.1
Q ss_pred HHHHhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEec
Q 013684 35 LRFLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSS 114 (438)
Q Consensus 35 ~~~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~ 114 (438)
....+|..+|+|+ +.+.+|+.+++++++||+++|+||++|||+|+.++|.|+++++++++++ ++|++|++
T Consensus 21 ~~~~~g~~~p~f~--------l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~--v~vv~vs~ 90 (181)
T 2p31_A 21 QSMQQEQDFYDFK--------AVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHH--FNVLAFPC 90 (181)
T ss_dssp ------CCGGGCE--------EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEEC
T ss_pred CcCCcCCccCceE--------eecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCC--EEEEEEEC
Confidence 3456899999999 9999999999999999999999999999999999999999999999876 99999998
Q ss_pred CC-------CHHHHHHhHhc-CCc--ccccCCChH--HHHHHhhhcCcCccc-------eEEEecCCCCCCCcccccc
Q 013684 115 DE-------DLNAFNNYRAC-MPW--LAVPYSDLE--TKKALNRKFDIEGIP-------CLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 115 D~-------~~~~~~~~~~~-~~~--~~~~~~d~~--~~~~l~~~~~v~~~P-------~~~lvd~~~~~G~v~~~~~ 173 (438)
|. +.+.++++.++ ++. ..+...+.. ....+ -.|.+..+| +++|||+ +|+++.+..
T Consensus 91 d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~~~~~~-~~~~~~~~P~~~~~~~~~~lid~---~G~i~~~~~ 164 (181)
T 2p31_A 91 NQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGTGAHPA-FKYLAQTSGKEPTWNFWKYLVAP---DGKVVGAWD 164 (181)
T ss_dssp CCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSSTTSCHH-HHHHHHHHSCCCCSTTCEEEECT---TSCEEEEEC
T ss_pred cCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCccchhh-hhhhhhcCCCccccceeEEEEcC---CCCEEEEeC
Confidence 74 67788888876 443 222111211 00111 135577889 9999999 999987643
No 140
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.74 E-value=2.2e-18 Score=157.43 Aligned_cols=115 Identities=7% Similarity=0.046 Sum_probs=101.3
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCC-Chhhh-----hhhHHHHHHHHHHHhhhhhcCCCCCCEEEEE
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARW-CIPCE-----KFMPKLLSIYQKIKQNLVEKGDALEDFEVVF 283 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~w-C~~C~-----~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~ 283 (438)
.+|..+|+|++ +.+|+ .+++++++||+++|+||+.| ||+|. .+++.|.++ | . +++||+
T Consensus 23 ~vG~~APdFtL~d~~G~-~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~---------gv~Vvg 87 (224)
T 3keb_A 23 RKGDYLPSFMLVDDQKH-DAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--P---------HLKLIV 87 (224)
T ss_dssp CTTCBCCCCEEEETTSC-EEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--T---------TSEEEE
T ss_pred CCCCCCCCeEEECCCCC-EEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--C---------CCEEEE
Confidence 36889999999 99999 99999999999999999988 99999 888888776 4 3 689999
Q ss_pred EecCCCHHHHHHHHhcCCCcccccCCch-hHHHHHhcCcCc---------eeeEEEECCCCcEEEccc
Q 013684 284 VSTDRDQTSFESYFGTMPWLALPFGDPT-IKELTKYFDVQG---------IPCLVIIGPEGKTVTKQG 341 (438)
Q Consensus 284 is~d~~~~~~~~~~~~~~~~~~p~~~d~-~~~l~~~~~v~~---------~P~~~lid~~G~i~~~~~ 341 (438)
||.| +....++|.++++.-.||++.|. ...+++.||+.. +|++||||++|+|++...
T Consensus 88 IS~D-s~~~~~~f~~~~gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~ 154 (224)
T 3keb_A 88 ITVD-SPSSLARARHEHGLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSER 154 (224)
T ss_dssp EESS-CHHHHHHHHHHHCCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEE
T ss_pred EECC-CHHHHHHHHHHcCCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEe
Confidence 9998 56788899998884379999997 699999999964 799999999999998853
No 141
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.74 E-value=1.1e-18 Score=156.49 Aligned_cols=123 Identities=9% Similarity=0.072 Sum_probs=97.1
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC--
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD-- 115 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D-- 115 (438)
..+.++|+|+ +.+.+|+.+++++++||+|||+||++||++|+.++|.|+++++++++++ ++||+|++|
T Consensus 21 ~~~~~~p~f~--------l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~--~~vi~is~d~~ 90 (187)
T 3dwv_A 21 SAASSIFDFE--------VLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQG--FTVLAFPSNQF 90 (187)
T ss_dssp TTCCSGGGSC--------CBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGT--CEEEEEEBCCC
T ss_pred cCCCccCCeE--------EEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCC--eEEEEEECccc
Confidence 3578899999 9999999999999999999999999999999999999999999999876 999999998
Q ss_pred -----CCHHHHHHhHhc-CC--cccccCCChH--HHHHH--------hhhcCcCccc---eEEEecCCCCCCCcccccc
Q 013684 116 -----EDLNAFNNYRAC-MP--WLAVPYSDLE--TKKAL--------NRKFDIEGIP---CLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 116 -----~~~~~~~~~~~~-~~--~~~~~~~d~~--~~~~l--------~~~~~v~~~P---~~~lvd~~~~~G~v~~~~~ 173 (438)
.+.+++++++++ ++ |..+...|.. ....+ ...|++..+| +++|||+ +|+++.+..
T Consensus 91 ~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~---~G~i~~~~~ 166 (187)
T 3dwv_A 91 GGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDR---DGVPVERFS 166 (187)
T ss_dssp SSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECT---TSCEEEEEC
T ss_pred CCCCCCCHHHHHHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECC---CCCEEEEEC
Confidence 467888888883 34 3322100111 00111 1445777888 9999999 999987743
No 142
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.74 E-value=1.9e-18 Score=153.80 Aligned_cols=118 Identities=15% Similarity=0.055 Sum_probs=99.0
Q ss_pred hhcc----chhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEe
Q 013684 39 IMSL----SQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVS 113 (438)
Q Consensus 39 ~g~~----~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs 113 (438)
+|+. +|+|+ +.+.+|+.++|++++||+++|+|| ++||++|+.++|.|+++++++++.| ++|++|+
T Consensus 23 ~Gd~ig~~aP~f~--------l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~--~~vv~Vs 92 (179)
T 3ixr_A 23 IGDTLNHSLLNHP--------LMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQIN--ATVLGVS 92 (179)
T ss_dssp TTCBCCHHHHHCC--------EEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTT--EEEEEEE
T ss_pred cCcccCCcCCCee--------EECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEc
Confidence 5555 99999 999999999999999999999998 9999999999999999999999876 9999999
Q ss_pred cCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCc------------cceEEEecCCCCCCCccccc
Q 013684 114 SDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEG------------IPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 114 ~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~------------~P~~~lvd~~~~~G~v~~~~ 172 (438)
.| +.+..++|.++++.....+.|.+ ..+++.|++.. .|+++|||+ +|+++...
T Consensus 93 ~D-~~~~~~~~~~~~~~~f~~l~D~~--~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~---~G~I~~~~ 157 (179)
T 3ixr_A 93 RD-SVKSHDSFCAKQGFTFPLVSDSD--AILCKAFDVIKEKTMYGRQVIGIERSTFLIGP---THRIVEAW 157 (179)
T ss_dssp SC-CHHHHHHHHHHHTCCSCEEECTT--CHHHHHTTCEEEECCC--CEEEECCEEEEECT---TSBEEEEE
T ss_pred CC-CHHHHHHHHHHcCCceEEEECCc--hHHHHHcCCcccccccCcccCCcceEEEEECC---CCEEEEEE
Confidence 98 56678888876553322222433 68889999853 689999999 99998764
No 143
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.74 E-value=3.6e-18 Score=149.66 Aligned_cols=125 Identities=9% Similarity=0.055 Sum_probs=94.7
Q ss_pred HHHhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC
Q 013684 36 RFLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD 115 (438)
Q Consensus 36 ~~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D 115 (438)
...+|..+|+|+ +.+.+|+.+++++++||+++|+||++||++|+.++|.|+++++++++++ +++++|++|
T Consensus 4 ~~~~g~~~p~f~--------l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~v~~d 73 (169)
T 2v1m_A 4 SHKSWNSIYEFT--------VKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKG--LRILAFPCN 73 (169)
T ss_dssp ---CCCSGGGCE--------EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECC
T ss_pred cccCCcccccce--------eecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCC--eEEEEEECC
Confidence 345799999999 9999999999999999999999999999999999999999999998875 999999987
Q ss_pred C-------CHHHHHHh-HhcCC--cccccCCChH--HHHHHh-----hhcC-----cCccceEEEecCCCCCCCcccccc
Q 013684 116 E-------DLNAFNNY-RACMP--WLAVPYSDLE--TKKALN-----RKFD-----IEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 116 ~-------~~~~~~~~-~~~~~--~~~~~~~d~~--~~~~l~-----~~~~-----v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
. +.+.+.++ .++++ |..+...|.. ....+. ..++ +.++|+++|||+ +|+++.+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~---~G~i~~~~~ 150 (169)
T 2v1m_A 74 QFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDR---QGQPVKRYS 150 (169)
T ss_dssp CSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECT---TSCEEEEEC
T ss_pred ccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECC---CCCEEEEcC
Confidence 3 56778888 36443 3322101211 001111 1124 566799999999 999987743
No 144
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.74 E-value=2.7e-18 Score=151.36 Aligned_cols=121 Identities=14% Similarity=0.115 Sum_probs=86.1
Q ss_pred hhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC---
Q 013684 39 IMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD--- 115 (438)
Q Consensus 39 ~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D--- 115 (438)
-|+.+|+|+ +++.+|+.+++++++||+++|+|||+||++|+ ++|.|+++++++++.+ ++|++|++|
T Consensus 8 ~~~~~~~f~--------l~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~--v~vv~vs~d~~~ 76 (171)
T 3cmi_A 8 HMSEFYKLA--------PVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEG--FTIIGFPCNQFG 76 (171)
T ss_dssp --CGGGGCC--------CBBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGT--EEEEEEEECSCC
T ss_pred chhheeeeE--------EEcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCC--eEEEEEECcccC
Confidence 367789999 99999999999999999999999999999999 9999999999999875 999999986
Q ss_pred ----CCHHHHHHhH-hcCC--cccccCCChH-------HHHHHhhhcCcCccc------eEEEecCCCCCCCcccccc
Q 013684 116 ----EDLNAFNNYR-ACMP--WLAVPYSDLE-------TKKALNRKFDIEGIP------CLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 116 ----~~~~~~~~~~-~~~~--~~~~~~~d~~-------~~~~l~~~~~v~~~P------~~~lvd~~~~~G~v~~~~~ 173 (438)
++.+.++++. ++++ |..+...+.. ...-..+.|++.++| +++|||+ +|+++.+..
T Consensus 77 ~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~---~G~i~~~~~ 151 (171)
T 3cmi_A 77 HQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDK---KGKVYERYS 151 (171)
T ss_dssp ------------------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECS---SSCEEEEEC
T ss_pred CCCCCCHHHHHHHHHhccCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECC---CCCEEEEeC
Confidence 4566778888 6544 3332211111 101112468999999 9999999 999987743
No 145
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.73 E-value=4.6e-18 Score=151.26 Aligned_cols=122 Identities=11% Similarity=0.052 Sum_probs=95.2
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCC-
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE- 116 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~- 116 (438)
..|..+|+|+ +.+.+|+.+++++++||+|||+||++|||+|+.++|.|+++++++++++ ++|++|++|.
T Consensus 13 ~~~~~~p~f~--------l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~--~~vi~is~d~~ 82 (180)
T 3kij_A 13 PKINSFYAFE--------VKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSH--FSVLAFPCNQF 82 (180)
T ss_dssp CCCCCGGGCE--------EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTS--EEEEEEECCCS
T ss_pred CCcCcccceE--------EecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCC--eEEEEEECCcc
Confidence 3578899999 9999999999999999999999999999999999999999999998876 9999999874
Q ss_pred ------CHHHHHHhHhc-CCcccccCC-----ChHHHHHHhhhc--CcCccce----EEEecCCCCCCCcccccc
Q 013684 117 ------DLNAFNNYRAC-MPWLAVPYS-----DLETKKALNRKF--DIEGIPC----LVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 117 ------~~~~~~~~~~~-~~~~~~~~~-----d~~~~~~l~~~~--~v~~~P~----~~lvd~~~~~G~v~~~~~ 173 (438)
+.+.++++.++ ++.....+. .... ..+...+ .+.++|+ ++|||+ +|+++.+..
T Consensus 83 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~~~p~~~~~~~lid~---~G~i~~~~~ 153 (180)
T 3kij_A 83 GESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEG-EPAFRFLVDSSKKEPRWNFWKYLVNP---EGQVVKFWR 153 (180)
T ss_dssp TTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSSTTC-CHHHHHHHHHHTCCCSSTTCEEEECT---TSCEEEEEC
T ss_pred ccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCccc-cHHHHHHHhcCCCCccccceEEEECC---CCCEEEEEC
Confidence 88889999887 553221111 1110 0111111 1236888 999999 999987754
No 146
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.73 E-value=1.4e-17 Score=153.63 Aligned_cols=117 Identities=12% Similarity=0.215 Sum_probs=100.0
Q ss_pred hhhcCCCCCcc-CCCCCceeeccccCCC--EEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPVSSLVGK--TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 287 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l~~~~gk--~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d 287 (438)
.+|..+|+|++ +.+| .+++++++|| +||++||++|||+|..+++.|.+++++|+++ +++||+||+|
T Consensus 6 ~~G~~aP~F~l~~~~G--~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~---------~v~vi~IS~D 74 (224)
T 1prx_A 6 LLGDVAPNFEANTTVG--RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKR---------NVKLIALSID 74 (224)
T ss_dssp CTTCBCCCCEEEETTE--EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTT---------TEEEEEEESS
T ss_pred CCcCCCCCcEEecCCC--CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHC---------CCEEEEEcCC
Confidence 46899999999 8888 6999999997 5666678999999999999999999999865 8999999998
Q ss_pred CCHHHHHHHHhc----------CCCcccccCCchhHHHHHhcCcC------------ceeeEEEECCCCcEEEcc
Q 013684 288 RDQTSFESYFGT----------MPWLALPFGDPTIKELTKYFDVQ------------GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 288 ~~~~~~~~~~~~----------~~~~~~p~~~d~~~~l~~~~~v~------------~~P~~~lid~~G~i~~~~ 340 (438)
. .+..++|.+. .+ +.||+..|...++++.||+. .+|++||||++|+|+...
T Consensus 75 ~-~~~~~~~~~~i~~~~~~~~~~~-~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~ 147 (224)
T 1prx_A 75 S-VEDHLAWSKDINAYNSEEPTEK-LPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSI 147 (224)
T ss_dssp C-HHHHHHHHHHHHHHTTSCCCSC-CSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEE
T ss_pred C-HHHHHHHHHHHHHhhCcccccC-cCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEE
Confidence 5 4455555553 33 78999999889999999984 479999999999999874
No 147
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.73 E-value=2.2e-18 Score=149.83 Aligned_cols=118 Identities=15% Similarity=0.221 Sum_probs=99.6
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDED 117 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~ 117 (438)
.+|..+|+|+ +.+.+|+.+++++++||+++|+||++||++|+.++|.|.++++++++.+ +.++.|+.|..
T Consensus 16 ~~G~~~p~f~--------l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~--~~~v~v~~d~~ 85 (158)
T 3hdc_A 16 RTGALAPNFK--------LPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGD--LVVLAVNVEKR 85 (158)
T ss_dssp CTTSBCCCCE--------EECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTS--EEEEEEECSSS
T ss_pred CCCCcCCCce--------eEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCC--eEEEEEeCCHH
Confidence 4799999999 9999999999999999999999999999999999999999999998654 99999999873
Q ss_pred HHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 118 LNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+.++.+.+++....+.+.. ..+.+.|++.++|+++|||+ +|+++.+..
T Consensus 86 ---~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~~~ 133 (158)
T 3hdc_A 86 ---FPEKYRRAPVSFNFLSDAT--GQVQQRYGANRLPDTFIVDR---KGIIRQRVT 133 (158)
T ss_dssp ---CCGGGGGCCCSCEEEECTT--SHHHHHTTCCSSSEEEEECT---TSBEEEEEE
T ss_pred ---HHHHHHHcCCCceEEECch--HHHHHHhCCCCcceEEEEcC---CCCEEEEEe
Confidence 5566665553322222333 68899999999999999999 999987654
No 148
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.73 E-value=1.4e-17 Score=145.22 Aligned_cols=120 Identities=20% Similarity=0.284 Sum_probs=100.7
Q ss_pred cchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCcc-chhhHHHHHHHHHHHhcC--CCCEEEEEEecCC--
Q 013684 42 LSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPP-CGNFTGVLVDVYEELRNN--GSDFEVVFVSSDE-- 116 (438)
Q Consensus 42 ~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~-C~~~~p~l~~l~~~~~~~--~~~~~iv~vs~D~-- 116 (438)
.+|+|+ +.+.+|+.+++++++||+++|+||++||++ |+.++|.|+++++++++. ..++++++|++|.
T Consensus 2 ~ap~f~--------l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~ 73 (164)
T 2ggt_A 2 LGGPFS--------LTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPER 73 (164)
T ss_dssp CCCCCE--------EEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTT
T ss_pred CCCCeE--------EEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCC
Confidence 356777 899999999999999999999999999998 999999999999999872 1259999999985
Q ss_pred -CHHHHHHhHhcCC--cccccCCChHHHHHHhhhcCcCccc---------------eEEEecCCCCCCCcccccc
Q 013684 117 -DLNAFNNYRACMP--WLAVPYSDLETKKALNRKFDIEGIP---------------CLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 117 -~~~~~~~~~~~~~--~~~~~~~d~~~~~~l~~~~~v~~~P---------------~~~lvd~~~~~G~v~~~~~ 173 (438)
+.+.+++|.+.++ |..+.. +.+....+.+.|++..+| +++|||+ +|+++.+..
T Consensus 74 d~~~~~~~~~~~~~~~~~~l~~-~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~---~G~i~~~~~ 144 (164)
T 2ggt_A 74 DTKEAIANYVKEFSPKLVGLTG-TREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGP---DGEFLDYFG 144 (164)
T ss_dssp CCHHHHHHHHHTTCSSCEEEEC-CHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECT---TSCEEEEEE
T ss_pred CCHHHHHHHHHHcCCCeEEEeC-CHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECC---CCeEEEEeC
Confidence 4778889988765 444432 345557899999999999 8999999 999987643
No 149
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.73 E-value=3.3e-18 Score=152.78 Aligned_cols=121 Identities=18% Similarity=0.232 Sum_probs=101.4
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDED 117 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~ 117 (438)
.+|..+|+|+ +.+.+|+.+++++++||+++|+||++||++|+.++|.|.++++++++.+ +++++|++|.+
T Consensus 35 ~~g~~~p~f~--------l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~v~~d~~ 104 (186)
T 1jfu_A 35 SAPLKLPDLA--------FEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPN--FEVVAINIDTR 104 (186)
T ss_dssp CSCCBCCCCE--------EECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTT--EEEEEEECCCS
T ss_pred cCCCcCCCcE--------eEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCC--cEEEEEECCCC
Confidence 3578889999 8999999999999999999999999999999999999999999998654 99999999864
Q ss_pred -HHHHHHhHhcCCccccc-CCChHHHHHHhhhcCcC----ccceEEEecCCCCCCCcccccc
Q 013684 118 -LNAFNNYRACMPWLAVP-YSDLETKKALNRKFDIE----GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 118 -~~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~v~----~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
.+.++++.++++...++ +.|.. ..+.+.|++. ++|+++|||+ +|+++.+..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~P~~~lid~---~G~i~~~~~ 161 (186)
T 1jfu_A 105 DPEKPKTFLKEANLTRLGYFNDQK--AKVFQDLKAIGRALGMPTSVLVDP---QGCEIATIA 161 (186)
T ss_dssp CTTHHHHHHHHTTCCTTCCEECTT--CHHHHHHHTTTCCSSSSEEEEECT---TSBEEEEEE
T ss_pred CHHHHHHHHHHcCCCCCceEECCc--chHHHHhccccccCCCCEEEEECC---CCCEEEEEe
Confidence 56788888877653232 22333 5777888875 8999999999 999987643
No 150
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.73 E-value=3.6e-18 Score=152.83 Aligned_cols=119 Identities=13% Similarity=0.130 Sum_probs=102.2
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC--
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD-- 115 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D-- 115 (438)
.+|..+|+|+ +.+.+|+.+++++++||+++|+||++||++|+.++|.|.+++++++++ +++++|+.|
T Consensus 8 ~~g~~~p~f~--------l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~---~~~v~v~~d~~ 76 (188)
T 2cvb_A 8 PLESPLIDAE--------LPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK---VAFVGINANDY 76 (188)
T ss_dssp CTTCBCCCCE--------EECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT---EEEEEEECCCT
T ss_pred CCCCCCCCce--------eecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC---eEEEEEEcCcc
Confidence 4789999999 899999999999999999999999999999999999999999998753 999999996
Q ss_pred -----CCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCccccc
Q 013684 116 -----EDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 116 -----~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
++.+.++++.+++++....+.|.. ..+.+.|++.++|+++|||+ +|+++.++
T Consensus 77 ~~~~~d~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~g 133 (188)
T 2cvb_A 77 EKYPEDAPEKMAAFAEEHGIFFPYLLDET--QEVAKAYRALRTPEVFLFDE---RRLLRYHG 133 (188)
T ss_dssp TTCGGGSHHHHHHHHHHHTCCSCEEECSS--SHHHHHTTCCEESEEEEECT---TCBEEEEE
T ss_pred ccccccCHHHHHHHHHHhCCCceEEECCc--chHHHHcCCCCCCeEEEECC---CCcEEEEE
Confidence 577888888887654322222333 67889999999999999999 99998773
No 151
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.73 E-value=1.1e-17 Score=147.53 Aligned_cols=123 Identities=15% Similarity=0.165 Sum_probs=98.6
Q ss_pred hhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCc-cchhhHHHHHHHHHHHhcCCCCEEEEEEecC--
Q 013684 39 IMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYP-PCGNFTGVLVDVYEELRNNGSDFEVVFVSSD-- 115 (438)
Q Consensus 39 ~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~-~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D-- 115 (438)
+|.++|+|+ ++|.+|+.+++++++||+|+|+||++||+ +|...++.|.++++.+++.+.++++|+||+|
T Consensus 8 ~~~~~PdF~--------L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~ 79 (170)
T 4hde_A 8 LNWDLETFQ--------FTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPD 79 (170)
T ss_dssp CCBCCCCCE--------EECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTT
T ss_pred CCCcCCCcE--------EECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcc
Confidence 688899999 99999999999999999999999999997 8999999999999999988778999999998
Q ss_pred -CCHHHHHHhHhcCC-----cccccCCChHHHHH-Hhhhc----------CcCccceEEEecCCCCCCCccccc
Q 013684 116 -EDLNAFNNYRACMP-----WLAVPYSDLETKKA-LNRKF----------DIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 116 -~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~-l~~~~----------~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
++++.+++|.+.++ |..+...+...... ....| .+.+.|+++|||+ +|+++...
T Consensus 80 ~Dtp~~l~~y~~~~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~---~G~i~~~~ 150 (170)
T 4hde_A 80 LDKPENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQ---NGKVMKKY 150 (170)
T ss_dssp TCCHHHHHHHHTTTCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECT---TSCEEEEE
T ss_pred cccHHHHHHHHHHcCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcC---CCeEEEEE
Confidence 46788888888653 54444323221122 22223 3456789999999 99998653
No 152
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.73 E-value=1.7e-17 Score=152.54 Aligned_cols=117 Identities=12% Similarity=0.175 Sum_probs=98.5
Q ss_pred hhhcCCCCCcc-CC--CCCceeeccccCCC-E-EEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEe
Q 013684 211 LLTNHDRGYLL-GH--PPDEKVPVSSLVGK-T-VGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 285 (438)
Q Consensus 211 ~~g~~~~~f~l-~~--~g~~~~~l~~~~gk-~-vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is 285 (438)
.+|..+|+|++ +. +| .+++++++|| + ||++||++|||+|..+++.|.+++++|+++ +++||+||
T Consensus 4 ~iG~~aP~F~l~~~~~~G--~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~---------~v~vi~vS 72 (220)
T 1xcc_A 4 HLGATFPNFTAKASGIDG--DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKL---------NCKLIGFS 72 (220)
T ss_dssp CTTCBCCCCEECBTTCSS--CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTT---------TEEEEEEE
T ss_pred CCCCCCCCcEeecccCCC--cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHc---------CCEEEEEe
Confidence 46899999999 77 67 5999999998 4 555568999999999999999999999865 89999999
Q ss_pred cCCCHHHHHHHHh-------cCCCcccccCCchhHHHHHhcCcC------------ceeeEEEECCCCcEEEcc
Q 013684 286 TDRDQTSFESYFG-------TMPWLALPFGDPTIKELTKYFDVQ------------GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 286 ~d~~~~~~~~~~~-------~~~~~~~p~~~d~~~~l~~~~~v~------------~~P~~~lid~~G~i~~~~ 340 (438)
+|. .+..++|.+ ..+ +.||+..|...++++.||+. .+|++||||++|+|+...
T Consensus 73 ~D~-~~~~~~~~~~i~~~~~~~~-~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~ 144 (220)
T 1xcc_A 73 CNS-KESHDKWIEDIKYYGKLNK-WEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATV 144 (220)
T ss_dssp SSC-HHHHHHHHHHHHHHHTCSC-CCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEE
T ss_pred CCC-HHHHHHHHHHHHHHhcCCC-CcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEE
Confidence 985 444455554 333 78999999999999999983 479999999999999874
No 153
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.72 E-value=2.7e-18 Score=149.42 Aligned_cols=122 Identities=13% Similarity=0.107 Sum_probs=103.2
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCC-EEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGK-VTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD 115 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk-~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D 115 (438)
.+|..+|+|+ +.+.+|+.+++++++|| +++|+|| ++||++|+.++|.|.++++++++.+ +++++|++|
T Consensus 10 ~~G~~~p~f~--------l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~--~~vv~is~d 79 (160)
T 1xvw_A 10 NVGATAPDFT--------LRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDD--SAALAISVG 79 (160)
T ss_dssp CTTSBCCCCE--------EECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSS--EEEEEEESC
T ss_pred CCCCCCCCeE--------eEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC--cEEEEEeCC
Confidence 4799999999 89999999999999998 9999998 9999999999999999999998754 999999998
Q ss_pred CCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcC----ccc--eEEEecCCCCCCCcccccc
Q 013684 116 EDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIE----GIP--CLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~----~~P--~~~lvd~~~~~G~v~~~~~ 173 (438)
+.+.++++.+++++....+.|......+.+.|++. ++| +++|||+ +|+++.+..
T Consensus 80 -~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~---~G~i~~~~~ 139 (160)
T 1xvw_A 80 -PPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDR---SGIIRFAEM 139 (160)
T ss_dssp -CHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECT---TSBEEEEEE
T ss_pred -CHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCccccCCCeeeeEEEECC---CCeEEEEEe
Confidence 56788888887665322222420126789999998 999 9999999 999987754
No 154
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.72 E-value=6.4e-18 Score=151.26 Aligned_cols=120 Identities=22% Similarity=0.230 Sum_probs=102.0
Q ss_pred HhhccchhHHHHHhhcccccCCCCC----EEeccccCCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEE
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGE----EVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFV 112 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~----~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~v 112 (438)
.+|..+|+|+ +.+.+|+ .+++++++||+++|+|| ++||++|+.++|.|.++++++++.+ +++++|
T Consensus 2 ~~G~~~P~f~--------l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~--v~vv~v 71 (187)
T 1we0_A 2 LIGTEVQPFR--------AQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLG--VEVYSV 71 (187)
T ss_dssp CTTCBCCCCE--------EEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTT--EEEEEE
T ss_pred CCCCcCCCeE--------EeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcC--CEEEEE
Confidence 3789999999 8999999 99999999999999999 9999999999999999999998865 999999
Q ss_pred ecCCCHHHHHHhHhcC----CcccccCCChHHHHHHhhhcCcC------ccceEEEecCCCCCCCcccccc
Q 013684 113 SSDEDLNAFNNYRACM----PWLAVPYSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 113 s~D~~~~~~~~~~~~~----~~~~~~~~d~~~~~~l~~~~~v~------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
++|. .+..++|.+.+ ++....+.|.. ..+.+.|++. .+|+++|||+ +|+++.+..
T Consensus 72 s~d~-~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~~~g~~~P~~~lid~---~G~i~~~~~ 136 (187)
T 1we0_A 72 STDT-HFVHKAWHENSPAVGSIEYIMIGDPS--QTISRQFDVLNEETGLADRGTFIIDP---DGVIQAIEI 136 (187)
T ss_dssp ESSC-HHHHHHHHHSCHHHHTCCSEEEECTT--CHHHHHTTCEETTTTEECEEEEEECT---TSBEEEEEE
T ss_pred ECCC-HHHHHHHHHHhccccCCCceEEECCc--hHHHHHhCCCcCCCCceeeEEEEECC---CCeEEEEEe
Confidence 9985 56677777766 33222222433 6888999998 9999999999 999987754
No 155
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=3.2e-19 Score=155.12 Aligned_cols=122 Identities=20% Similarity=0.262 Sum_probs=103.3
Q ss_pred HHhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHH-HHHHHh-cCCCCEEEEEEec
Q 013684 37 FLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVD-VYEELR-NNGSDFEVVFVSS 114 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~-l~~~~~-~~~~~~~iv~vs~ 114 (438)
+.+|..+|+|+ +.+.+|+.+++++++||+++|+||++||++|+.++|.|.+ ++++++ .. ++.++.|++
T Consensus 7 l~~g~~~p~f~--------l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~--~~~vv~v~~ 76 (159)
T 2ls5_A 7 VRIGEMAPDFT--------ITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNA--DFALIGIDR 76 (159)
Confidence 45799999999 8999999999999999999999999999999999999998 999987 43 499999999
Q ss_pred CCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC--cCccceEEEecCCCCCCCcccccc
Q 013684 115 DEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD--IEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 115 D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~--v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
|.+.+.++++.+++++....+.|.. ..+.+.|+ +.++|+++|||+ +|+++.+..
T Consensus 77 d~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~P~~~lid~---~G~i~~~~~ 132 (159)
T 2ls5_A 77 DEPLEKVLAFAKSTGVTYPLGLDPG--ADIFAKYALRDAGITRNVLIDR---EGKIVKLTR 132 (159)
Confidence 9887788888887765322232433 78899999 456999999999 999987643
No 156
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.72 E-value=1.2e-17 Score=146.42 Aligned_cols=124 Identities=12% Similarity=0.142 Sum_probs=95.3
Q ss_pred HHhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC-
Q 013684 37 FLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD- 115 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D- 115 (438)
..+|..+|+|+ +.+.+|+.+++++++||+++|+||++||++|+.++|.|+++++++++++ ++|++|++|
T Consensus 6 ~~~g~~~p~f~--------l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~vs~d~ 75 (170)
T 2p5q_A 6 SKNPESVHDFT--------VKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQG--LEILAFPCNQ 75 (170)
T ss_dssp ----CCGGGCE--------EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECCT
T ss_pred CCCCccccceE--------EEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCC--EEEEEEECCC
Confidence 35799999999 9999999999999999999999999999999999999999999998875 999999997
Q ss_pred ------CCHHHHHHhHh-cCC--cccccCCChHH--HHHHh-----hhcCc--Cccc---eEEEecCCCCCCCcccccc
Q 013684 116 ------EDLNAFNNYRA-CMP--WLAVPYSDLET--KKALN-----RKFDI--EGIP---CLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 116 ------~~~~~~~~~~~-~~~--~~~~~~~d~~~--~~~l~-----~~~~v--~~~P---~~~lvd~~~~~G~v~~~~~ 173 (438)
++.+.++++.+ .++ |..+...|... ...+. ..+++ ..+| +++|||+ +|+++.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~---~G~i~~~~~ 151 (170)
T 2p5q_A 76 FGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNK---DGQVVDRYY 151 (170)
T ss_dssp TTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECT---TSCEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECC---CCCEEEeeC
Confidence 36778888887 444 33221112210 01111 23466 7788 9999999 999987743
No 157
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.72 E-value=1.1e-17 Score=152.63 Aligned_cols=123 Identities=13% Similarity=0.027 Sum_probs=94.3
Q ss_pred HhhccchhHHHHHhhcccccCCC-CCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC-
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEI-GEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD- 115 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~-g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D- 115 (438)
..+..+|+|+ +.+.+ |+.+++++++||+|||+|||+|||+|+.++|.|+++++++++.| ++||+|++|
T Consensus 21 ~~~~~~p~f~--------l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g--~~vv~v~~d~ 90 (208)
T 2f8a_A 21 QSMQSVYAFS--------ARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRG--LVVLGFPCNQ 90 (208)
T ss_dssp -CCCCGGGCE--------ECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECCC
T ss_pred hhcCccCceE--------eeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCC--eEEEEEECCc
Confidence 3567899999 89999 99999999999999999999999999999999999999999876 999999987
Q ss_pred ------CCHHHHHHhHh------cCCcccccCC--Ch--H----HHHHHhhhc-------------------------Cc
Q 013684 116 ------EDLNAFNNYRA------CMPWLAVPYS--DL--E----TKKALNRKF-------------------------DI 150 (438)
Q Consensus 116 ------~~~~~~~~~~~------~~~~~~~~~~--d~--~----~~~~l~~~~-------------------------~v 150 (438)
.+.+++++|++ +++..+..+. +. . .-..+...+ ++
T Consensus 91 ~~~~e~d~~~~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 170 (208)
T 2f8a_A 91 FGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDV 170 (208)
T ss_dssp STTTTCSCHHHHHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCC
T ss_pred ccccCCCCHHHHHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCcc
Confidence 24577888886 5543221111 10 0 001122122 36
Q ss_pred CccceEEEecCCCCCCCcccccc
Q 013684 151 EGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 151 ~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
.+.|+++|||+ +|+++.+..
T Consensus 171 ~~~p~tflID~---~G~i~~~~~ 190 (208)
T 2f8a_A 171 AWNFEKFLVGP---DGVPLRRYS 190 (208)
T ss_dssp CSTTCEEEECT---TSCEEEEEC
T ss_pred ccCceEEEEcC---CCcEEEEeC
Confidence 67799999999 999987754
No 158
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.72 E-value=5.1e-18 Score=156.14 Aligned_cols=121 Identities=13% Similarity=0.155 Sum_probs=101.1
Q ss_pred HHhhccchhHHHHHhhcccccCC--CC--CEEecccc-CCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEE
Q 013684 37 FLIMSLSQWYVQQLRRRMTSTKE--IG--EEVKVSDL-EGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVV 110 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~~~--~g--~~v~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv 110 (438)
+.+|..+|+|+ +.+. +| +.++++++ +||++||+|| ++||++|+.++|.|++++++|++.+ ++||
T Consensus 25 l~~G~~aP~F~--------l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~--v~vv 94 (221)
T 2c0d_A 25 SLVTKKAYNFT--------AQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKN--VELL 94 (221)
T ss_dssp -CTTSBCCCCE--------EEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTT--EEEE
T ss_pred CCCCCCCCCeE--------EeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCC--CEEE
Confidence 56899999999 8888 89 99999999 9999999999 9999999999999999999998865 9999
Q ss_pred EEecCCCHHHHHHhHhcC-------CcccccCCChHHHHHHhhhcCc-----CccceEEEecCCCCCCCcccccc
Q 013684 111 FVSSDEDLNAFNNYRACM-------PWLAVPYSDLETKKALNRKFDI-----EGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 111 ~vs~D~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~l~~~~~v-----~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+|++| +.+..++|.+.. ++....+.|.. ..+.+.|++ ..+|+++|||+ +|+|+....
T Consensus 95 ~Is~D-~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~--~~~~~~ygv~~~~g~~~P~~~lID~---~G~I~~~~~ 163 (221)
T 2c0d_A 95 GISVD-SVYSHLAWKNMPIEKGGIGNVEFTLVSDIN--KDISKNYNVLYDNSFALRGLFIIDK---NGCVRHQTV 163 (221)
T ss_dssp EEESS-CHHHHHHHHHSCGGGTCCCSCSSEEEECTT--SHHHHHTTCEETTTEECEEEEEECT---TSBEEEEEE
T ss_pred EEeCC-CHHHHHHHHHHhhhhcCccCCceEEEECCc--hHHHHHcCCcccCCCccceEEEECC---CCeEEEEEe
Confidence 99997 456677777765 22111122433 688999999 47999999999 999998754
No 159
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.72 E-value=7.4e-18 Score=150.32 Aligned_cols=125 Identities=11% Similarity=0.042 Sum_probs=98.3
Q ss_pred HHHhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC
Q 013684 36 RFLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD 115 (438)
Q Consensus 36 ~~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D 115 (438)
...+|..+|+|+ +++.+|+.+++++++||+++|+||++||++|+.++|.|+++++++++++ ++|++|++|
T Consensus 20 ~~~~g~~~p~f~--------l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~--v~vv~vs~d 89 (183)
T 2obi_A 20 DWRCARSMHEFS--------AKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECG--LRILAFPCN 89 (183)
T ss_dssp CGGGCCSGGGCE--------EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECC
T ss_pred CCcccCcccceE--------EEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCC--eEEEEEECC
Confidence 345899999999 9999999999999999999999999999999999999999999999875 999999987
Q ss_pred -------CCHHHHHHhHhcCCcccccCC--ChH--HHHHHhhhc-------C-----cCccceEEEecCCCCCCCccccc
Q 013684 116 -------EDLNAFNNYRACMPWLAVPYS--DLE--TKKALNRKF-------D-----IEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 116 -------~~~~~~~~~~~~~~~~~~~~~--d~~--~~~~l~~~~-------~-----v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
++.+.++++.+++++....+. |.. ....+.+.+ + +..+|+++|||+ +|+++.+.
T Consensus 90 ~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~---~G~i~~~~ 166 (183)
T 2obi_A 90 QFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDK---NGCVVKRY 166 (183)
T ss_dssp CSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECT---TSCEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECC---CCCEEEEe
Confidence 367889999887754322221 211 001122111 3 455799999999 99998764
Q ss_pred c
Q 013684 173 G 173 (438)
Q Consensus 173 ~ 173 (438)
.
T Consensus 167 ~ 167 (183)
T 2obi_A 167 G 167 (183)
T ss_dssp C
T ss_pred C
Confidence 3
No 160
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.72 E-value=2e-17 Score=154.23 Aligned_cols=117 Identities=12% Similarity=0.129 Sum_probs=99.8
Q ss_pred hhhcCCCCCcc-CCCCCceeec-ccc--CCCE-EEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEe
Q 013684 211 LLTNHDRGYLL-GHPPDEKVPV-SSL--VGKT-VGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVS 285 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g~~~~~l-~~~--~gk~-vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is 285 (438)
.+|..+|+|++ +.+| .+++ +++ +||+ ||++||++||++|..+++.|.+++++|+++ +++||+||
T Consensus 6 ~iG~~aPdF~l~~~~G--~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~---------gv~VI~VS 74 (249)
T 3a2v_A 6 LIGERFPEMEVTTDHG--VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL---------GVDLIGLS 74 (249)
T ss_dssp CTTSBCCCEEEEETTE--EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT---------TEEEEEEE
T ss_pred CCCCCCCCeEEEcCCC--CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC---------CcEEEEEE
Confidence 47899999999 8887 5999 999 9996 556789999999999999999999999876 89999999
Q ss_pred cCCCHHHHHHHHhc------CCCcccccCCchhHHHHHhcCcC-------ceeeEEEECCCCcEEEcc
Q 013684 286 TDRDQTSFESYFGT------MPWLALPFGDPTIKELTKYFDVQ-------GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 286 ~d~~~~~~~~~~~~------~~~~~~p~~~d~~~~l~~~~~v~-------~~P~~~lid~~G~i~~~~ 340 (438)
+|.. ....+|.+. . .+.||+..|...++++.||+. ++|++||||++|+|+...
T Consensus 75 ~Ds~-~~~~~w~~~~~~~~~~-~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~ 140 (249)
T 3a2v_A 75 VDSV-FSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTML 140 (249)
T ss_dssp SSCH-HHHHHHHHHHHHHTCC-CCCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEE
T ss_pred CCCH-HHHHHHHHHHHHhcCC-CCceeEEECCchHHHHHhCCccccCCCcccceEEEECCCCeEEEEE
Confidence 9853 333334332 3 378999999999999999997 899999999999999874
No 161
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.72 E-value=2.8e-18 Score=154.39 Aligned_cols=121 Identities=13% Similarity=0.182 Sum_probs=103.5
Q ss_pred HhhccchhHHHHHhhccccc-CCCCCEEeccccCCC-EEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC
Q 013684 38 LIMSLSQWYVQQLRRRMTST-KEIGEEVKVSDLEGK-VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD 115 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~-~~~g~~v~l~~~~gk-~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D 115 (438)
.+|..+|+|+ +. +.+|+.+++++++|| +++|+||++||++|+.++|.|+++++++++++ +++++|++|
T Consensus 19 ~~g~~~p~f~--------l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~v~~d 88 (196)
T 2ywi_A 19 PLGKQAPPFA--------LTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKG--VSFVAINSN 88 (196)
T ss_dssp CTTCBCCCCE--------EEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGT--CEEEEEECS
T ss_pred CcCCcCCcee--------eeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCC--cEEEEEECC
Confidence 4789999999 99 999999999999998 59999999999999999999999999998865 999999997
Q ss_pred -------CCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 116 -------EDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 116 -------~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
++.+.++++.+++++....+.|.. ..+.+.|++..+|+++|||+ +|+++.+..
T Consensus 89 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~~~ 148 (196)
T 2ywi_A 89 DAEQYPEDSPENMKKVAEELGYPFPYLYDET--QEVAKAYDAACTPDFYIFDR---DLKCVYRGQ 148 (196)
T ss_dssp CTTTCGGGSHHHHHHHHHHHTCCSCEEECSS--CHHHHHHTCCEESEEEEEET---TCBEEEEEC
T ss_pred ccccccccCHHHHHHHHHHcCCCceEEECCc--hHHHHHhCCCCCCeEEEEcC---CCeEEEccc
Confidence 577888999887654322222332 67889999999999999999 999987743
No 162
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.72 E-value=8.2e-18 Score=141.30 Aligned_cols=113 Identities=18% Similarity=0.312 Sum_probs=98.4
Q ss_pred hccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHH
Q 013684 40 MSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLN 119 (438)
Q Consensus 40 g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~ 119 (438)
|.++|+|+ +.+.+|+.+++++++||+++|+||++||++|+.+.|.|.+++++++ ++.++.|+.|.+.+
T Consensus 2 ~~~~p~~~--------~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~ 69 (136)
T 1zzo_A 2 VPAQLQFS--------AKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP----EVTFVGVAGLDQVP 69 (136)
T ss_dssp CCGGGCCE--------EEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHH
T ss_pred CCCCCCcc--------cccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC----CeEEEEEeCCCCHH
Confidence 45678888 8999999999999999999999999999999999999999999985 39999999999999
Q ss_pred HHHHhHhcCCccccc-CCChHHHHHHhhhcCcCccceEEEecCCCCCCCcc
Q 013684 120 AFNNYRACMPWLAVP-YSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 169 (438)
Q Consensus 120 ~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~ 169 (438)
.++++.+++++..++ +.+.. ..+.+.|++.++|+++++|+ +|+++
T Consensus 70 ~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~i~~~P~~~~id~---~g~i~ 115 (136)
T 1zzo_A 70 AMQEFVNKYPVKTFTQLADTD--GSVWANFGVTQQPAYAFVDP---HGNVD 115 (136)
T ss_dssp HHHHHHHHTTCTTSEEEECTT--CHHHHHTTCCSSSEEEEECT---TCCEE
T ss_pred HHHHHHHHcCCCceEEEEcCC--cHHHHHcCCCCCceEEEECC---CCCEE
Confidence 999999987652222 21322 67889999999999999999 99987
No 163
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.72 E-value=8.4e-18 Score=150.31 Aligned_cols=124 Identities=11% Similarity=0.020 Sum_probs=96.3
Q ss_pred HHhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCC
Q 013684 37 FLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE 116 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~ 116 (438)
..+|..+|+|+ +.+.+|+.+++++++||+++|+||++|||+|+.++|.|+++++++++++ ++|++|++|.
T Consensus 23 ~~~g~~~p~f~--------l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~--v~vv~is~d~ 92 (185)
T 2gs3_A 23 MRCARSMHEFS--------AKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECG--LRILAFPCNQ 92 (185)
T ss_dssp GGGCCCGGGCE--------EEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--EEEEEEECCT
T ss_pred ccCCCCcCCce--------eEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCC--eEEEEEECcc
Confidence 45799999999 9999999999999999999999999999999999999999999999876 9999999873
Q ss_pred -------CHHHHHHhHhcCCcccccCC--ChH--HHHHHh----hhc---C-----cCccceEEEecCCCCCCCcccccc
Q 013684 117 -------DLNAFNNYRACMPWLAVPYS--DLE--TKKALN----RKF---D-----IEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 117 -------~~~~~~~~~~~~~~~~~~~~--d~~--~~~~l~----~~~---~-----v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+.+.++++.++++.....+. |.. ....+. ..+ + +..+|+++|||+ +|+++.+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~---~G~i~~~~~ 169 (185)
T 2gs3_A 93 FGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDK---NGCVVKRYG 169 (185)
T ss_dssp TTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECT---TSCEEEEEC
T ss_pred cCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECC---CCCEEEeeC
Confidence 56778888887653321111 111 001111 111 3 445799999999 999987753
No 164
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.72 E-value=7.5e-18 Score=141.81 Aligned_cols=111 Identities=17% Similarity=0.279 Sum_probs=96.7
Q ss_pred cchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHH
Q 013684 42 LSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAF 121 (438)
Q Consensus 42 ~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~ 121 (438)
.+|+|+ +.+.+|+.+++++++||+++|+||++||++|+.+.|.|.+++++++ ++.++.|+.|.+.+.+
T Consensus 3 ~~p~~~--------l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~ 70 (136)
T 1lu4_A 3 ERLQFT--------ATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP----AVTFVGIATRADVGAM 70 (136)
T ss_dssp GGGCCE--------EEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSSCHHHH
T ss_pred CCCCeE--------eecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC----CcEEEEEEcCCCHHHH
Confidence 467777 8999999999999999999999999999999999999999999986 3999999999999999
Q ss_pred HHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCcc
Q 013684 122 NNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 169 (438)
Q Consensus 122 ~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~ 169 (438)
+++.+++++....+.+.. ..+.+.|++.++|+++++|+ +|+++
T Consensus 71 ~~~~~~~~~~~~~~~d~~--~~~~~~~~i~~~P~~~lid~---~G~i~ 113 (136)
T 1lu4_A 71 QSFVSKYNLNFTNLNDAD--GVIWARYNVPWQPAFVFYRA---DGTST 113 (136)
T ss_dssp HHHHHHHTCCSEEEECTT--SHHHHHTTCCSSSEEEEECT---TSCEE
T ss_pred HHHHHHcCCCceEEECCc--hhHHHhcCCCCCCEEEEECC---CCcEE
Confidence 999987664322222333 68899999999999999999 99987
No 165
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.72 E-value=1.2e-17 Score=144.09 Aligned_cols=120 Identities=16% Similarity=0.191 Sum_probs=103.7
Q ss_pred HHhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEec--
Q 013684 37 FLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSS-- 114 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~-- 114 (438)
+.+|..+|+|+ +.+.+|+.+++++++ |+++|+||++||++|+.++|.|.++++++ + +.+++|++
T Consensus 5 l~~g~~~p~f~--------l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~--v~~v~v~~d~ 70 (154)
T 3ia1_A 5 VKPGEPLPDFL--------LLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---G--VPFYVISREP 70 (154)
T ss_dssp CCSBEECCCCC--------EECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---C--CCEEEEECCT
T ss_pred CCCCCcCCceE--------EECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---C--CeEEEEeCCC
Confidence 45799999999 999999999999999 99999999999999999999999999999 3 88999999
Q ss_pred CCCHHHHHHhHhcCCcccccCCC-hHHHHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 115 DEDLNAFNNYRACMPWLAVPYSD-LETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 115 D~~~~~~~~~~~~~~~~~~~~~d-~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+++.+.++++.+++++....+.+ .+....+.+.|++.++|+++|||+ +|+++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~~ 127 (154)
T 3ia1_A 71 RDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLGQPWTFVVDR---EGKVVALFA 127 (154)
T ss_dssp TCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCSSCEEEEECT---TSEEEEEEE
T ss_pred cccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCCcccEEEEECC---CCCEEEEEc
Confidence 67899999999988754333333 123379999999999999999999 999887643
No 166
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.71 E-value=3.6e-17 Score=143.63 Aligned_cols=114 Identities=19% Similarity=0.263 Sum_probs=96.2
Q ss_pred ccCCCCCEEeccccCCCEEEEEEeccCCcc-chhhHHHHHHHHHHHhcC--CCCEEEEEEecCC---CHHHHHHhHhcCC
Q 013684 56 STKEIGEEVKVSDLEGKVTALYFSANWYPP-CGNFTGVLVDVYEELRNN--GSDFEVVFVSSDE---DLNAFNNYRACMP 129 (438)
Q Consensus 56 ~~~~~g~~v~l~~~~gk~vll~F~a~wC~~-C~~~~p~l~~l~~~~~~~--~~~~~iv~vs~D~---~~~~~~~~~~~~~ 129 (438)
+.+.+|+.+++++++||+++|+||++||++ |+.++|.|+++++++++. +.++++++|++|. +.+.+++|.++++
T Consensus 11 l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~ 90 (171)
T 2rli_A 11 LLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFH 90 (171)
T ss_dssp EEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTC
T ss_pred EEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcC
Confidence 899999999999999999999999999998 999999999999999762 1359999999983 6788999998765
Q ss_pred --cccccCCChHHHHHHhhhcCcCccc---------------eEEEecCCCCCCCcccccc
Q 013684 130 --WLAVPYSDLETKKALNRKFDIEGIP---------------CLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 130 --~~~~~~~d~~~~~~l~~~~~v~~~P---------------~~~lvd~~~~~G~v~~~~~ 173 (438)
|..+.. +.+....+.+.|++..+| +++|||+ +|+++.+..
T Consensus 91 ~~~~~l~~-~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~---~G~i~~~~~ 147 (171)
T 2rli_A 91 PRLLGLTG-STKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNP---DGLFTDYYG 147 (171)
T ss_dssp TTCCEEEC-CHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECT---TSCEEEEEE
T ss_pred CCeEEEeC-CHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECC---CCeEEEEEC
Confidence 444332 334446899999999888 9999999 999987643
No 167
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.71 E-value=5.6e-18 Score=149.05 Aligned_cols=119 Identities=13% Similarity=0.087 Sum_probs=100.7
Q ss_pred HhhccchhHHHHHhhccccc-CCCCCEEecccc-CCCEEEEEEe-ccCCccchh-hHHHHHHHHHHHhcCCCCE-EEEEE
Q 013684 38 LIMSLSQWYVQQLRRRMTST-KEIGEEVKVSDL-EGKVTALYFS-ANWYPPCGN-FTGVLVDVYEELRNNGSDF-EVVFV 112 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~-~~~g~~v~l~~~-~gk~vll~F~-a~wC~~C~~-~~p~l~~l~~~~~~~~~~~-~iv~v 112 (438)
.+|+.+|+|+ +. +.+|+.++|+++ +||+++|+|| ++|||+|+. ++|.|+++++++++.| + +|++|
T Consensus 4 ~~G~~aP~f~--------l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g--v~~vv~I 73 (167)
T 2wfc_A 4 KEGDKLPAVT--------VFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKG--VDIIACM 73 (167)
T ss_dssp CTTCBCCCCE--------EESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTT--CCEEEEE
T ss_pred CCCCcCCCcE--------eecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEEEEE
Confidence 4799999999 88 999999999998 9999988886 999999999 9999999999999876 9 99999
Q ss_pred ecCCCHHHHHHhHhcCCcc--cccCCChHHHHHHhhhcCcCcc-----------ceEEEecCCCCCCCcccccc
Q 013684 113 SSDEDLNAFNNYRACMPWL--AVPYSDLETKKALNRKFDIEGI-----------PCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 113 s~D~~~~~~~~~~~~~~~~--~~~~~d~~~~~~l~~~~~v~~~-----------P~~~lvd~~~~~G~v~~~~~ 173 (438)
|.| +.+..++|.++.+.. .....|.+ .++.+.|++... |+++|| + +|+|++...
T Consensus 74 s~d-~~~~~~~~~~~~~~~~~fp~l~D~~--~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~---~G~I~~~~~ 140 (167)
T 2wfc_A 74 AVN-DSFVMDAWGKAHGADDKVQMLADPG--GAFTKAVDMELDLSAVLGNVRSKRYSLVI-E---DGVVTKVNV 140 (167)
T ss_dssp ESS-CHHHHHHHHHHTTCTTTSEEEECTT--SHHHHHTTCEECCHHHHSSCEECCEEEEE-E---TTEEEEEEE
T ss_pred eCC-CHHHHHHHHHhcCCCcceEEEECCC--CcHHHHcCCccccccccCcccceEEEEEE-e---CCEEEEEEe
Confidence 998 567788888877643 22223443 788999998754 999999 9 999998754
No 168
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.71 E-value=4.5e-18 Score=145.25 Aligned_cols=120 Identities=15% Similarity=0.115 Sum_probs=101.4
Q ss_pred HhhccchhHHHHHhhcccc--cCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC
Q 013684 38 LIMSLSQWYVQQLRRRMTS--TKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD 115 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~--~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D 115 (438)
.+|.++|+|+ + .+.+|+.+++++++||+++|+||++||++|+.+.|.|.++++++++. +.++.|++|
T Consensus 2 ~~g~~~P~f~--------~~~~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~---~~~~~v~~~ 70 (148)
T 2b5x_A 2 KLRQPMPELT--------GEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ---LNVVAVHMP 70 (148)
T ss_dssp CTTCBCCCCC--------CCSEEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEECC
T ss_pred CCCCCCCCCc--------cccccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC---cEEEEEEcC
Confidence 3689999999 7 68899999999999999999999999999999999999999999653 899999987
Q ss_pred C-----CHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 116 E-----DLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 116 ~-----~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
. +.+.+.++.+++++....+.+.. ..+++.|++.++|+++++|+ +|+++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~~~ 128 (148)
T 2b5x_A 71 RSEDDLDPGKIKETAAEHDITQPIFVDSD--HALTDAFENEYVPAYYVFDK---TGQLRHFQA 128 (148)
T ss_dssp CSTTTSSHHHHHHHHHHTTCCSCEEECSS--CHHHHHTCCCCSSEEEEECT---TCBEEEEEE
T ss_pred CCccccCHHHHHHHHHHcCCCcceEECCc--hhHHHHhCCCCCCEEEEECC---CCcEEEEec
Confidence 5 78889999987764322222332 67899999999999999999 999887643
No 169
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.71 E-value=3.7e-18 Score=148.84 Aligned_cols=111 Identities=15% Similarity=0.210 Sum_probs=94.3
Q ss_pred ccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC-----CCHHHHHHhHhcCCc
Q 013684 56 STKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD-----EDLNAFNNYRACMPW 130 (438)
Q Consensus 56 ~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D-----~~~~~~~~~~~~~~~ 130 (438)
+.+.+|+.+++++++||+++|+||++||++|+.++|.|.+++++++..+ +.+++|++| .+.+.+.+++..+++
T Consensus 23 l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~--~~vv~v~~~~~~~~~~~~~~~~~~~~~~~ 100 (164)
T 2h30_A 23 MKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSS--ANLITVASPGFLHEKKDGEFQKWYAGLNY 100 (164)
T ss_dssp CEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTT--SEEEEEECTTSTTCCCTTHHHHHHTTSCC
T ss_pred cCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCC--cEEEEEEcCCCccccCHHHHHHHHHhCCC
Confidence 6699999999999999999999999999999999999999999998865 999999985 456778888887776
Q ss_pred ccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCccccc
Q 013684 131 LAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 131 ~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
..++. +.+....+++.|++.++|+++|||+ +|+++.+.
T Consensus 101 ~~~~~-~~d~~~~~~~~~~v~~~P~~~lid~---~G~i~~~~ 138 (164)
T 2h30_A 101 PKLPV-VTDNGGTIAQNLNISVYPSWALIGK---DGDVQRIV 138 (164)
T ss_dssp TTSCE-EECTTCHHHHHTTCCSSSEEEEECT---TSCEEEEE
T ss_pred CcceE-EEcCchHHHHHcCCCccceEEEECC---CCcEEEEE
Confidence 53332 1222268999999999999999999 99988664
No 170
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.71 E-value=5.9e-18 Score=151.96 Aligned_cols=126 Identities=9% Similarity=0.057 Sum_probs=97.8
Q ss_pred HHHHhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEec
Q 013684 35 LRFLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSS 114 (438)
Q Consensus 35 ~~~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~ 114 (438)
..+..|..+|+|+ +.+.+|+.+++++++||++||+||++||++|+.++|.|+++++++++++ ++|++|++
T Consensus 20 s~~~~~~~~p~f~--------l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~--v~vv~vs~ 89 (190)
T 2vup_A 20 SHMSAASSIFDFE--------VLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQG--FTVLAFPC 89 (190)
T ss_dssp ----CCCSGGGSC--------CBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGT--CEEEEEEC
T ss_pred ccCCCCCcccCeE--------EEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCC--eEEEEEEc
Confidence 3455688999999 9999999999999999999999999999999999999999999999875 99999999
Q ss_pred CC-------CHHHHHHhH-hcCC--cccccCCChH--HHHHH-----hhhcCcCccc------eEEEecCCCCCCCcccc
Q 013684 115 DE-------DLNAFNNYR-ACMP--WLAVPYSDLE--TKKAL-----NRKFDIEGIP------CLVVLQPYDDKDDATLH 171 (438)
Q Consensus 115 D~-------~~~~~~~~~-~~~~--~~~~~~~d~~--~~~~l-----~~~~~v~~~P------~~~lvd~~~~~G~v~~~ 171 (438)
|. +.+.++++. ++++ |..+...|.. ....+ .+.|++.++| +++|||+ +|+++.+
T Consensus 90 d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~---~G~i~~~ 166 (190)
T 2vup_A 90 NQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDR---DGVPVER 166 (190)
T ss_dssp CCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECT---TSCEEEE
T ss_pred CccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECC---CCcEEEE
Confidence 83 678888888 5543 3322211211 00011 2347899999 9999999 9999876
Q ss_pred cc
Q 013684 172 DG 173 (438)
Q Consensus 172 ~~ 173 (438)
..
T Consensus 167 ~~ 168 (190)
T 2vup_A 167 FS 168 (190)
T ss_dssp EC
T ss_pred EC
Confidence 43
No 171
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.71 E-value=8.3e-18 Score=141.23 Aligned_cols=116 Identities=17% Similarity=0.247 Sum_probs=97.2
Q ss_pred cchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEe-----cCC
Q 013684 42 LSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVS-----SDE 116 (438)
Q Consensus 42 ~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs-----~D~ 116 (438)
++|+|+ +.+.+|+.+++++++||+++|+||++||++|+.++|.|.++++++. .++.++.|. .+.
T Consensus 1 ~~p~f~--------l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~v~i~~~~~~~~~ 69 (138)
T 4evm_A 1 EVADFE--------LMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAG---DDYVVLTVVSPGHKGEQ 69 (138)
T ss_dssp CCCCCE--------EEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCT---TTEEEEEEECTTSTTCC
T ss_pred CCCcce--------eECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC---CCcEEEEEEcCCCCchh
Confidence 367777 8999999999999999999999999999999999999999999843 249999994 457
Q ss_pred CHHHHHHhHhcCCcccccC-CChHHHHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 117 DLNAFNNYRACMPWLAVPY-SDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~-~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+.+.+.++.+.+++..++. .+.. ..+.+.|++.++|+++++|+ +|+++.+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~~~ 122 (138)
T 4evm_A 70 SEADFKNWYKGLDYKNLPVLVDPS--GKLLETYGVRSYPTQAFIDK---EGKLVKTHP 122 (138)
T ss_dssp CHHHHHHHHTTCCCTTCCEEECTT--CHHHHHTTCCSSSEEEEECT---TCCEEEEEE
T ss_pred hHHHHHHHHhhcCCCCeeEEECcc--hHHHHHcCcccCCeEEEECC---CCcEEEeec
Confidence 8889999999887633332 1332 68999999999999999999 999986643
No 172
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.71 E-value=6.4e-18 Score=151.32 Aligned_cols=120 Identities=23% Similarity=0.243 Sum_probs=99.9
Q ss_pred HhhccchhHHHHHhhcccccCC-CC--CEEeccccCCCEEEEEEec-cCCccchhhHHHHHHHHHHHhcCCCCEEEEEEe
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKE-IG--EEVKVSDLEGKVTALYFSA-NWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVS 113 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~-~g--~~v~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs 113 (438)
.+|..+|+|+ +.+. +| +.+++++++||+++|+||+ +|||+|+.++|.|+++++++++.+ ++|++|+
T Consensus 2 ~~G~~aP~f~--------l~~~~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~--v~vv~Is 71 (186)
T 1n8j_A 2 LINTKIKPFK--------NQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLG--VDVYSVS 71 (186)
T ss_dssp CTTCBCCCCE--------EEEEETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTT--EEEEEEE
T ss_pred CCCCcCCCcE--------eecccCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCC--CEEEEEE
Confidence 3789999999 8888 59 8999999999999999995 999999999999999999999866 9999999
Q ss_pred cCCCHHHHHHhHhcC----CcccccCCChHHHHHHhhhcCcC------ccceEEEecCCCCCCCcccccc
Q 013684 114 SDEDLNAFNNYRACM----PWLAVPYSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 114 ~D~~~~~~~~~~~~~----~~~~~~~~d~~~~~~l~~~~~v~------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
.| +.+..++|.+++ ++....+.|.. ..+.+.|++. .+|+++|||+ +|+++....
T Consensus 72 ~d-~~~~~~~~~~~~~~~~~~~fp~l~D~~--~~~~~~ygv~~~~~g~~~p~~~lID~---~G~i~~~~~ 135 (186)
T 1n8j_A 72 TD-THFTHKAWHSSSETIAKIKYAMIGDPT--GALTRNFDNMREDEGLADRATFVVDP---QGIIQAIEV 135 (186)
T ss_dssp SS-CHHHHHHHHHHCTTGGGCCSEEEECTT--SHHHHHTTCEETTTTEECEEEEEECT---TSBEEEEEE
T ss_pred CC-CHHHHHHHHHHcCcccCCceeEEECCc--hHHHHHhCCccCCCCceeeEEEEECC---CCeEEEEEe
Confidence 98 456677888766 33221222433 6788999997 4799999999 999997754
No 173
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.71 E-value=1e-17 Score=146.95 Aligned_cols=119 Identities=13% Similarity=0.108 Sum_probs=99.5
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE 116 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~ 116 (438)
.+|..+|+|+ +.+.+|+.+++++++||+++|+|| ++||++|+.++|.|+++++++ . +++|++|+.|
T Consensus 18 ~~G~~~P~f~--------l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~--~v~vv~Is~d- 84 (165)
T 1q98_A 18 QVGEIVENFI--------LVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--S--NTIVLCISAD- 84 (165)
T ss_dssp CTTCBCCCCE--------EECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--T--TEEEEEEESS-
T ss_pred CCCCCCCCeE--------EECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--C--CCEEEEEeCC-
Confidence 4789999999 899999999999999999999999 899999999999999999998 4 3999999997
Q ss_pred CHHHHHHhHhcCCc-ccccCCChHHHHHHhhhcCcCc---------cceEEEecCCCCCCCcccccc
Q 013684 117 DLNAFNNYRACMPW-LAVPYSDLETKKALNRKFDIEG---------IPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 117 ~~~~~~~~~~~~~~-~~~~~~d~~~~~~l~~~~~v~~---------~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+.+.+++|.+++++ ....+.|.. ...+.+.|++.. .|+++|||+ +|+++....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~D~~-~~~~~~~~gv~~~~~~~~g~~~p~~~liD~---~G~i~~~~~ 147 (165)
T 1q98_A 85 LPFAQARFCGAEGIENAKTVSTFR-NHALHSQLGVDIQTGPLAGLTSRAVIVLDE---QNNVLHSQL 147 (165)
T ss_dssp CHHHHTTCTTTTTCTTEEEEECTT-CTHHHHHTTCEECSSTTTTSBCCEEEEECT---TSBEEEEEE
T ss_pred CHHHHHHHHHHcCCCceEEeeccc-cchHHHHhCceecccccCCccceeEEEEcC---CCEEEEEEe
Confidence 56678888887665 222223431 267889999863 599999999 999987764
No 174
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.71 E-value=9.5e-18 Score=150.83 Aligned_cols=119 Identities=16% Similarity=0.186 Sum_probs=100.6
Q ss_pred hhccchhHHHHHhhcccccCC--CC--CEEecccc-CCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEE
Q 013684 39 IMSLSQWYVQQLRRRMTSTKE--IG--EEVKVSDL-EGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFV 112 (438)
Q Consensus 39 ~g~~~p~f~~~~~~~~~~~~~--~g--~~v~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~v 112 (438)
+|.++|+|+ +.+. +| +.++++++ +||+++|+|| ++||++|+.++|.|.++++++++.+ ++|++|
T Consensus 2 ~G~~aP~f~--------l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~--v~vv~I 71 (192)
T 2h01_A 2 FQGQAPSFK--------AEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERN--VELLGC 71 (192)
T ss_dssp CSSBCCCCE--------EEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTT--EEEEEE
T ss_pred CCCcCCCcE--------eEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEE
Confidence 688999999 8888 89 89999999 9999999999 9999999999999999999998865 999999
Q ss_pred ecCCCHHHHHHhHhcC-------CcccccCCChHHHHHHhhhcCcC-----ccceEEEecCCCCCCCcccccc
Q 013684 113 SSDEDLNAFNNYRACM-------PWLAVPYSDLETKKALNRKFDIE-----GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 113 s~D~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~l~~~~~v~-----~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
++| +.+...+|.+.+ ++....+.|.. ..+.+.|++. .+|+++|||+ +|+++....
T Consensus 72 s~d-~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~--~~~~~~~gv~~~~g~~~P~~~liD~---~G~i~~~~~ 138 (192)
T 2h01_A 72 SVD-SKFTHLAWKKTPLSQGGIGNIKHTLISDIS--KSIARSYDVLFNESVALRAFVLIDK---QGVVQHLLV 138 (192)
T ss_dssp ESS-CHHHHHHHHTSCGGGTCCCSCSSEEEECTT--SHHHHHTTCEETTTEECCEEEEECT---TSBEEEEEE
T ss_pred EeC-CHHHHHHHHHhHHhhCCccCCCcCeEECCc--HHHHHHhCCcCcCCceeeEEEEEcC---CCEEEEEEe
Confidence 998 466777777765 22211122333 6889999999 8999999999 999987754
No 175
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.71 E-value=9.7e-18 Score=151.54 Aligned_cols=120 Identities=13% Similarity=0.156 Sum_probs=101.5
Q ss_pred HhhccchhHHHHHhhcccccCC--CCC---EEecccc-CCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEE
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKE--IGE---EVKVSDL-EGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVV 110 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~--~g~---~v~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv 110 (438)
.+|..+|+|+ +.+. +|+ .++++++ +||+++|+|| ++||++|+.++|.|.++++++++.+ ++++
T Consensus 2 ~~G~~~P~f~--------l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv 71 (198)
T 1zof_A 2 VVTKLAPDFK--------APAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKG--FNVI 71 (198)
T ss_dssp CTTSBCCCCE--------EEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTT--EEEE
T ss_pred CCCCcCCceE--------eecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcC--CEEE
Confidence 4789999999 8898 898 9999999 9999999999 9999999999999999999998875 9999
Q ss_pred EEecCCCHHHHHHhHhc-------CCcccccCCChHHHHHHhhhcCcC-----ccceEEEecCCCCCCCcccccc
Q 013684 111 FVSSDEDLNAFNNYRAC-------MPWLAVPYSDLETKKALNRKFDIE-----GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 111 ~vs~D~~~~~~~~~~~~-------~~~~~~~~~d~~~~~~l~~~~~v~-----~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+|++|. .+..++|.+. .++....+.|.. ..+.+.|++. .+|+++|||+ +|+++.+..
T Consensus 72 ~Is~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~~g~~~P~~~lid~---~G~i~~~~~ 140 (198)
T 1zof_A 72 GVSIDS-EQVHFAWKNTPVEKGGIGQVSFPMVADIT--KSISRDYDVLFEEAIALRGAFLIDK---NMKVRHAVI 140 (198)
T ss_dssp EEESSC-HHHHHHHHTSCGGGTCCCCCSSCEEECTT--SHHHHHTTCEETTTEECEEEEEEET---TTEEEEEEE
T ss_pred EEECCC-HHHHHHHHHhhhhcccccCceeEEEECCc--hHHHHHhCCcccCCcccceEEEECC---CCEEEEEEe
Confidence 999985 6677777776 333221122333 6888999999 9999999999 999987754
No 176
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.71 E-value=2.7e-17 Score=149.03 Aligned_cols=127 Identities=17% Similarity=0.242 Sum_probs=100.3
Q ss_pred HHHHhhccc--hhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCcc-chhhHHHHHHHHHHHhcC-CCCEEEE
Q 013684 35 LRFLIMSLS--QWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPP-CGNFTGVLVDVYEELRNN-GSDFEVV 110 (438)
Q Consensus 35 ~~~~~g~~~--p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~-C~~~~p~l~~l~~~~~~~-~~~~~iv 110 (438)
....+|.++ |+|+ +.+.+|+.+++++++||++||+||++||++ |+.++|.|+++++++++. +.+++|+
T Consensus 11 ~~~~~g~~~~~p~f~--------l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv 82 (200)
T 2b7k_A 11 ANRGYGKPSLGGPFH--------LEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPL 82 (200)
T ss_dssp -----CCCCCCCCCE--------EEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_pred hHhccCCCCcCCCEE--------EEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEE
Confidence 345678886 9999 899999999999999999999999999997 999999999999999864 3359999
Q ss_pred EEecCC---CHHHHHHhHhcCC--cccccCCChHHHHHHhhhcCcC-ccc---------------eEEEecCCCCCCCcc
Q 013684 111 FVSSDE---DLNAFNNYRACMP--WLAVPYSDLETKKALNRKFDIE-GIP---------------CLVVLQPYDDKDDAT 169 (438)
Q Consensus 111 ~vs~D~---~~~~~~~~~~~~~--~~~~~~~d~~~~~~l~~~~~v~-~~P---------------~~~lvd~~~~~G~v~ 169 (438)
+|++|. +.+.+++|.++++ |..++. +.+....+++.|++. ..| +++|||+ +|+++
T Consensus 83 ~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~-~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~---~G~i~ 158 (200)
T 2b7k_A 83 FITCDPARDSPAVLKEYLSDFHPSILGLTG-TFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDP---EGQFV 158 (200)
T ss_dssp EEESCTTTCCHHHHHHHHTTSCTTCEEEEC-CHHHHHHHHHHTTC--------------CTTTCCCEEEECT---TSCEE
T ss_pred EEECCCCCCCHHHHHHHHHHcCCCceEEeC-CHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECC---CCcEE
Confidence 999984 7888999998764 554543 344447888999987 344 8899999 99998
Q ss_pred cccc
Q 013684 170 LHDG 173 (438)
Q Consensus 170 ~~~~ 173 (438)
....
T Consensus 159 ~~~~ 162 (200)
T 2b7k_A 159 DALG 162 (200)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 7643
No 177
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.71 E-value=9.9e-18 Score=151.14 Aligned_cols=120 Identities=16% Similarity=0.193 Sum_probs=101.1
Q ss_pred HhhccchhHHHHHhhcccccCCC-------------C--CEEeccccCCCEEEEEEe-ccCCccchhhHHHHHHHHHHHh
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEI-------------G--EEVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELR 101 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~-------------g--~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~ 101 (438)
.+|..+|+|+ +.+.+ | +.+++++++||+++|+|| ++||++|+.++|.|.+++++++
T Consensus 5 ~~G~~~P~f~--------l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~ 76 (195)
T 2bmx_A 5 TIGDQFPAYQ--------LTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFE 76 (195)
T ss_dssp CTTCBCCCCE--------EEEECSSCGGGSCCSSGGGGEEEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHH
T ss_pred CCCCcCCCcC--------cccccccccccccccccCCCccEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHH
Confidence 4799999999 88887 7 899999999999999999 9999999999999999999998
Q ss_pred cCCCCEEEEEEecCCCHHHHHHhHhcC----CcccccCCChHHHHHHhhhcCcC-----ccceEEEecCCCCCCCccccc
Q 013684 102 NNGSDFEVVFVSSDEDLNAFNNYRACM----PWLAVPYSDLETKKALNRKFDIE-----GIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 102 ~~~~~~~iv~vs~D~~~~~~~~~~~~~----~~~~~~~~d~~~~~~l~~~~~v~-----~~P~~~lvd~~~~~G~v~~~~ 172 (438)
+.+ +++++|++|. .+..++|.+.+ ++....+.|.. ..+.+.|++. .+|+++|||+ +|+++.+.
T Consensus 77 ~~~--v~vv~Vs~d~-~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~~g~~~P~~~lid~---~G~i~~~~ 148 (195)
T 2bmx_A 77 DRD--AQILGVSIDS-EFAHFQWRAQHNDLKTLPFPMLSDIK--RELSQAAGVLNADGVADRVTFIVDP---NNEIQFVS 148 (195)
T ss_dssp TTT--EEEEEEESSC-HHHHHHHHHHCTTGGGCCSCEEECTT--SHHHHHHTCBCTTSSBCEEEEEECT---TSBEEEEE
T ss_pred HCC--CEEEEEECCC-HHHHHHHHHHhccccCCceeEEeCCc--hHHHHHhCCcccCCCccceEEEEcC---CCeEEEEE
Confidence 765 9999999985 66777887765 32211122333 6889999999 9999999999 99998875
Q ss_pred c
Q 013684 173 G 173 (438)
Q Consensus 173 ~ 173 (438)
.
T Consensus 149 ~ 149 (195)
T 2bmx_A 149 A 149 (195)
T ss_dssp E
T ss_pred e
Confidence 4
No 178
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.71 E-value=4.3e-17 Score=148.17 Aligned_cols=119 Identities=19% Similarity=0.259 Sum_probs=103.6
Q ss_pred hhhcCCCCCc----c-CCCCCceeeccccCCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEE
Q 013684 211 LLTNHDRGYL----L-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFV 284 (438)
Q Consensus 211 ~~g~~~~~f~----l-~~~g~~~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~i 284 (438)
.+|..+|||+ + +.+|+ +++|++++||+++|+|| +.|||.|..++..+++++++|++. +++|++|
T Consensus 27 ~vG~~APdF~~~a~l~d~~g~-~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~---------g~~vigi 96 (219)
T 3tue_A 27 KINSPAPSFEEVALMPNGSFK-KISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNEL---------NCEVLAC 96 (219)
T ss_dssp CTTSBCCCCEEEEECTTSCEE-EEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTT---------TEEEEEE
T ss_pred ccCCcCCCCcccccccCCCCc-EEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccC---------CcEEEEe
Confidence 5899999998 6 88888 99999999999999999 789999999999999999999976 8999999
Q ss_pred ecCCCHHHHHHHHhcC------CCcccccCCchhHHHHHhcCcC----c--eeeEEEECCCCcEEEcc
Q 013684 285 STDRDQTSFESYFGTM------PWLALPFGDPTIKELTKYFDVQ----G--IPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 285 s~d~~~~~~~~~~~~~------~~~~~p~~~d~~~~l~~~~~v~----~--~P~~~lid~~G~i~~~~ 340 (438)
|+| +....++|..+. ..+.||++.|.+.+++++|||- + ...+||||++|+|+...
T Consensus 97 S~D-s~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~ 163 (219)
T 3tue_A 97 SID-SEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQIT 163 (219)
T ss_dssp ESS-CHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred eCC-chhhHHHHhhhhHHhcCccccccccccCcccHHHHHcCCcccCCCeeEEEEEEECCCCeEEEEE
Confidence 999 555666666542 2478999999999999999982 3 35899999999998764
No 179
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.70 E-value=1.2e-17 Score=152.92 Aligned_cols=122 Identities=12% Similarity=0.159 Sum_probs=102.5
Q ss_pred HHHhhccchhHHHHHhhcccccCC--CC--CEEecccc-CCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEE
Q 013684 36 RFLIMSLSQWYVQQLRRRMTSTKE--IG--EEVKVSDL-EGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEV 109 (438)
Q Consensus 36 ~~~~g~~~p~f~~~~~~~~~~~~~--~g--~~v~l~~~-~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~i 109 (438)
.+.+|..+|+|+ +.+. +| +.++++++ +||+++|+|| ++||++|+.++|.|++++++|++.+ ++|
T Consensus 20 ~l~~G~~aP~f~--------l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~--v~v 89 (213)
T 2i81_A 20 PTYVGKEAPFFK--------AEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERN--VEL 89 (213)
T ss_dssp CCCBTSBCCCCE--------EEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTT--EEE
T ss_pred cccCCCcCCCeE--------eeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCC--CEE
Confidence 345899999999 8888 89 89999999 9999999999 9999999999999999999998865 999
Q ss_pred EEEecCCCHHHHHHhHhcC-------CcccccCCChHHHHHHhhhcCcC-----ccceEEEecCCCCCCCcccccc
Q 013684 110 VFVSSDEDLNAFNNYRACM-------PWLAVPYSDLETKKALNRKFDIE-----GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 110 v~vs~D~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~l~~~~~v~-----~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
|+|++| +.+..++|.+.. ++....+.|.. ..+.+.|++. .+|+++|||+ +|+++....
T Consensus 90 v~Is~D-~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~--~~~~~~ygv~~~~g~~~p~~~lID~---~G~i~~~~~ 159 (213)
T 2i81_A 90 LGCSVD-SKYTHLAWKKTPLAKGGIGNIKHTLLSDIT--KSISKDYNVLFDDSVSLRAFVLIDM---NGIVQHLLV 159 (213)
T ss_dssp EEEESS-CHHHHHHHHSSCGGGTCCCSCSSEEEECTT--SHHHHHTTCEETTTEECEEEEEECT---TSBEEEEEE
T ss_pred EEEeCC-CHHHHHHHHHHHHhhCCccCCCceEEECCc--hHHHHHhCCccccCCcccEEEEECC---CCEEEEEEe
Confidence 999998 566777787755 22211122433 6899999999 8999999999 999988753
No 180
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.70 E-value=1.5e-17 Score=145.76 Aligned_cols=119 Identities=18% Similarity=0.137 Sum_probs=100.0
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccC-CccchhhHHHHHHHHHHHhcCCCCEEEEEEecCC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANW-YPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE 116 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~w-C~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~ 116 (438)
.+|..+|+|+ +.+.+|+.+++++++||+++|+||++| |++|+.++|.|+++++++ . ++++++|+.|
T Consensus 19 ~~G~~~p~f~--------l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~--~~~vv~is~d- 85 (167)
T 2jsy_A 19 KVGDQAPDFT--------VLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--G--DVNVYTISAD- 85 (167)
T ss_dssp CTTSCCCCCE--------EEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--S--SCEEEEEECS-
T ss_pred CCCCcCCceE--------EECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--C--CCEEEEEECC-
Confidence 4789999999 899999999999999999999999999 999999999999999999 3 4999999998
Q ss_pred CHHHHHHhHhcCCccccc-CCChHHHHHHhhhcCcCc------cceEEEecCCCCCCCcccccc
Q 013684 117 DLNAFNNYRACMPWLAVP-YSDLETKKALNRKFDIEG------IPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~v~~------~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+.+.++++.+++++..++ +.|. ....+.+.|++.. +|+++|||+ +|+++.+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~v~~~~~g~~~p~~~lid~---~G~i~~~~~ 145 (167)
T 2jsy_A 86 LPFAQARWCGANGIDKVETLSDH-RDMSFGEAFGVYIKELRLLARSVFVLDE---NGKVVYAEY 145 (167)
T ss_dssp SGGGTSCCGGGSSCTTEEEEEGG-GTCHHHHHTTCBBTTTCSBCCEEEEECT---TSCEEEEEE
T ss_pred CHHHHHHHHHhcCCCCceEeeCC-chhHHHHHhCCccccCCceeeEEEEEcC---CCcEEEEEe
Confidence 456677888877652233 2231 2267889999987 499999999 999998764
No 181
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.70 E-value=1.3e-17 Score=151.12 Aligned_cols=119 Identities=17% Similarity=0.144 Sum_probs=100.8
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE 116 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~ 116 (438)
.+|..+|+|+ +.+.+|+.++|++++||+++|+|| ++||++|+.++|.|+++++++ .+ ++|++||.|
T Consensus 53 ~~G~~aPdf~--------l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~--v~vv~Is~D- 119 (200)
T 3zrd_A 53 QIGDKAKDFT--------LVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--EN--TVVLCISSD- 119 (200)
T ss_dssp CTTCBCCCCE--------EECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TT--EEEEEEESS-
T ss_pred CCCCCCCCeE--------EECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CC--CEEEEEECC-
Confidence 4799999999 999999999999999999999999 789999999999999999998 43 999999998
Q ss_pred CHHHHHHhHhcCCc-ccccCCChHHHHHHhhhcCcC---------ccceEEEecCCCCCCCcccccc
Q 013684 117 DLNAFNNYRACMPW-LAVPYSDLETKKALNRKFDIE---------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 117 ~~~~~~~~~~~~~~-~~~~~~d~~~~~~l~~~~~v~---------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+.+.+++|.+++++ ....+.|.. ...+.+.|++. ..|+++|||+ +|+++....
T Consensus 120 ~~~~~~~~~~~~~~~~f~~l~D~~-~~~~~~~ygv~~~~~~~~g~~~p~~~lID~---~G~I~~~~~ 182 (200)
T 3zrd_A 120 LPFAQSRFCGAEGLSNVITLSTLR-GADFKQAYGVAITEGPLAGLTARAVVVLDG---QDNVIYSEL 182 (200)
T ss_dssp CHHHHTTCTTTTTCTTEEEEETTS-CTHHHHHTTCEECSSTTTTSBCCEEEEECT---TSBEEEEEE
T ss_pred CHHHHHHHHHHcCCCCceEEecCc-hHHHHHHhCceeecccCCCccccEEEEECC---CCeEEEEEe
Confidence 56778888887765 332333441 26889999986 3699999999 999997754
No 182
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.70 E-value=1.2e-17 Score=153.83 Aligned_cols=121 Identities=14% Similarity=0.178 Sum_probs=98.4
Q ss_pred HHHHhhccchhHHHHHhhcccccC---CCCCEEeccccCCCEEEEEEec-cCCccchhhHHHHHHHHHHHhcCCCCEEEE
Q 013684 35 LRFLIMSLSQWYVQQLRRRMTSTK---EIGEEVKVSDLEGKVTALYFSA-NWYPPCGNFTGVLVDVYEELRNNGSDFEVV 110 (438)
Q Consensus 35 ~~~~~g~~~p~f~~~~~~~~~~~~---~~g~~v~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv 110 (438)
..+.+|..+|+|+ +.+ .+|+.+++++++||++||+||+ +||++|+.++|.|++++++|++++ ++||
T Consensus 38 ~~l~~G~~aP~f~--------l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~--v~vv 107 (222)
T 3ztl_A 38 MVLLPNRPAPEFK--------GQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRN--CQVI 107 (222)
T ss_dssp --CCSSEECCCCE--------EEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTT--EEEE
T ss_pred ccccCCCCCCCeE--------EecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC--CEEE
Confidence 3456899999999 874 4569999999999999999996 999999999999999999999876 9999
Q ss_pred EEecCCCHHHHHHhHhcC---------CcccccCCChHHHHHHhhhcCcC------ccceEEEecCCCCCCCcccccc
Q 013684 111 FVSSDEDLNAFNNYRACM---------PWLAVPYSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 111 ~vs~D~~~~~~~~~~~~~---------~~~~~~~~d~~~~~~l~~~~~v~------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+|++|. .++..++.+.+ +|..+. |.+ ..+.+.|++. .+|+++|||+ +|+++....
T Consensus 108 ~Is~D~-~~~~~~~~~~~~~~~~~~~~~~~~l~--D~~--~~~~~~ygv~~~~~g~~~P~~~lID~---~G~I~~~~~ 177 (222)
T 3ztl_A 108 ACSTDS-QYSHLAWDNLDRKSGGLGHMKIPLLA--DRK--QEISKAYGVFDEEDGNAFRGLFIIDP---NGILRQITI 177 (222)
T ss_dssp EEESSC-HHHHHHHHHSCGGGTSCCSCSSCEEE--CSS--SHHHHHTTCBCTTTSSBCEEEEEECT---TSEEEEEEE
T ss_pred EEECCC-HHHHHHHHHHhhhhccccccceeEEe--CCc--hHHHHHcCCeecCCCCccceEEEECC---CCeEEEEEe
Confidence 999985 44455555543 333222 333 6889999998 8999999999 999987754
No 183
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.69 E-value=1.2e-17 Score=152.53 Aligned_cols=122 Identities=19% Similarity=0.200 Sum_probs=99.6
Q ss_pred HHHhhccchhHHHHHhhcccccCC---CCCEEeccccCCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEE
Q 013684 36 RFLIMSLSQWYVQQLRRRMTSTKE---IGEEVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVF 111 (438)
Q Consensus 36 ~~~~g~~~p~f~~~~~~~~~~~~~---~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~ 111 (438)
.+.+|..+|+|+ +.+. +|+.+++++++||+++|+|| ++||++|+.++|.|++++++|++.+ ++||+
T Consensus 18 ~~~~G~~aP~f~--------l~~~~~~~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~--v~vv~ 87 (211)
T 2pn8_A 18 LYFQSMPAPYWE--------GTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSIN--TEVVA 87 (211)
T ss_dssp -CCSSCBCCCCE--------EEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTT--EEEEE
T ss_pred cCCCCCcCCCeE--------eecccCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEE
Confidence 345799999999 7764 56899999999999999999 9999999999999999999998865 99999
Q ss_pred EecCCCHHHHHHhHhcC-------CcccccCCChHHHHHHhhhcCcC------ccceEEEecCCCCCCCcccccc
Q 013684 112 VSSDEDLNAFNNYRACM-------PWLAVPYSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 112 vs~D~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~l~~~~~v~------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
|++| +.+..++|.+.. ++....+.|.. ..+++.|++. .+|+++|||+ +|+++....
T Consensus 88 Is~D-~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~--~~~~~~ygv~~~~~g~~~p~~~lID~---~G~I~~~~~ 156 (211)
T 2pn8_A 88 CSVD-SQFTHLAWINTPRRQGGLGPIRIPLLSDLT--HQISKDYGVYLEDSGHTLRGLFIIDD---KGILRQITL 156 (211)
T ss_dssp EESS-CHHHHHHHHTSCGGGTCCCSCSSCEEECTT--SHHHHHTTCEETTTTEECEEEEEECT---TSBEEEEEE
T ss_pred EECC-CHHHHHHHHHHhhhccCccCCceEEEECCc--hHHHHHcCCcccCCCcccceEEEECC---CCEEEEEEe
Confidence 9997 456677777755 22211122433 6889999995 6999999999 999997753
No 184
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.69 E-value=1.2e-17 Score=146.23 Aligned_cols=118 Identities=16% Similarity=0.121 Sum_probs=98.0
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEec-cCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSA-NWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE 116 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~ 116 (438)
.+|..+|+|+ +.+.+|+.+++++++||+++|+||+ +||++|+.++|.|+++++++ . ++++++|+.|
T Consensus 17 ~~G~~~P~f~--------l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~--~v~vv~is~d- 83 (163)
T 1psq_A 17 QVGDKALDFS--------LTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--D--NTVVLTVSMD- 83 (163)
T ss_dssp CTTSBCCCCE--------EECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--T--TEEEEEEESS-
T ss_pred CCCCCCCCEE--------EEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--C--CcEEEEEECC-
Confidence 4789999999 8999999999999999999999995 99999999999999999998 3 4999999998
Q ss_pred CHHHHHHhHhcCCc-ccccCCC-hHHHHHHhhhcCcC----c--cceEEEecCCCCCCCcccccc
Q 013684 117 DLNAFNNYRACMPW-LAVPYSD-LETKKALNRKFDIE----G--IPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 117 ~~~~~~~~~~~~~~-~~~~~~d-~~~~~~l~~~~~v~----~--~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+.+..++|.+++++ ....+.| .+ ..+.+.|++. + .|+++|||+ +|+++....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~D~~~--~~~~~~~gv~~~~~g~~~p~~~liD~---~G~i~~~~~ 143 (163)
T 1psq_A 84 LPFAQKRWCGAEGLDNAIMLSDYFD--HSFGRDYALLINEWHLLARAVFVLDT---DNTIRYVEY 143 (163)
T ss_dssp CHHHHHHHHHHHTCTTSEEEECTTT--CHHHHHHTCBCTTTCSBCCEEEEECT---TCBEEEEEE
T ss_pred CHHHHHHHHHhcCCCCcEEecCCch--hHHHHHhCCccccCCceEEEEEEEcC---CCeEEEEEe
Confidence 45667778876554 2222224 32 6788999987 3 499999999 999988764
No 185
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.69 E-value=1.8e-17 Score=150.37 Aligned_cols=120 Identities=17% Similarity=0.192 Sum_probs=100.2
Q ss_pred HhhccchhHHHHHhhcccccCC--CC--CEEeccccCCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEE
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKE--IG--EEVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFV 112 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~--~g--~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~v 112 (438)
.+|..+|+|+ +.+. +| +.+++++++||+++|+|| ++||++|+.++|.|+++++++++.+ +++++|
T Consensus 7 ~~G~~aP~f~--------l~~~~~~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~--v~vi~I 76 (202)
T 1uul_A 7 EDLHPAPDFN--------ETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIG--CEVLAC 76 (202)
T ss_dssp CTTSBCCCCE--------EEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTT--EEEEEE
T ss_pred cCCCcCCCcE--------eeeeecCCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCC--CEEEEE
Confidence 4799999999 8877 78 899999999999999999 9999999999999999999998865 999999
Q ss_pred ecCCCHHHHHHhHhcC-------CcccccCCChHHHHHHhhhcCcC------ccceEEEecCCCCCCCcccccc
Q 013684 113 SSDEDLNAFNNYRACM-------PWLAVPYSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 113 s~D~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~l~~~~~v~------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
++| +.+...++.+.+ +.....+.|.. ..+.+.|++. .+|+++|||+ +|+++.+..
T Consensus 77 s~D-~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~--~~~~~~ygv~~~~~g~~~P~~~lid~---~G~i~~~~~ 144 (202)
T 1uul_A 77 SMD-SEYSHLAWTSIERKRGGLGQMNIPILADKT--KCIMKSYGVLKEEDGVAYRGLFIIDP---KQNLRQITV 144 (202)
T ss_dssp ESS-CHHHHHHHHHSCGGGTCCCSCSSCEEECTT--CHHHHHHTCEETTTTEECEEEEEECT---TSBEEEEEE
T ss_pred eCC-CHHHHHHHHHHHHhhCCCCCCceeEEECCc--hHHHHHcCCccCCCCceeeEEEEECC---CCEEEEEEe
Confidence 998 456677777755 22111122332 6889999999 9999999999 999987753
No 186
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.69 E-value=2.1e-17 Score=149.24 Aligned_cols=120 Identities=21% Similarity=0.193 Sum_probs=99.4
Q ss_pred HhhccchhHHHHHhhcccccCC-CC--CEEeccccCCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEe
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKE-IG--EEVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVS 113 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~-~g--~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs 113 (438)
.+|..+|+|+ +.+. +| +.+++++++||+++|+|| ++||++|+.++|.|+++++++++.+ +++++|+
T Consensus 6 ~~G~~aP~f~--------l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~--v~vv~Is 75 (197)
T 1qmv_A 6 RIGKPAPDFK--------ATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLG--CEVLGVS 75 (197)
T ss_dssp CTTSBCCCCE--------EEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTT--EEEEEEE
T ss_pred cCCCCCCCeE--------eEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEEEE
Confidence 4799999999 8887 78 999999999999999999 9999999999999999999998865 9999999
Q ss_pred cCCCHHHHHHhHhcC-------CcccccCCChHHHHHHhhhcCcC------ccceEEEecCCCCCCCcccccc
Q 013684 114 SDEDLNAFNNYRACM-------PWLAVPYSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 114 ~D~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~l~~~~~v~------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+|. .+...++++.+ ++......|.. ..+.+.|++. .+|+++|||+ +|+++....
T Consensus 76 ~d~-~~~~~~~~~~~~~~~~~~~~~~p~l~D~~--~~~~~~~gv~~~~~~~~~P~~~lid~---~G~i~~~~~ 142 (197)
T 1qmv_A 76 VDS-QFTHLAWINTPRKEGGLGPLNIPLLADVT--RRLSEDYGVLKTDEGIAYRGLFIIDG---KGVLRQITV 142 (197)
T ss_dssp SSC-HHHHHHHHTSCGGGTCCCSCSSCEEECTT--CHHHHHTTCEETTTTEECEEEEEECT---TSBEEEEEE
T ss_pred CCC-HHHHHHHHHHHHhhCCCCCCceEEEECCc--HHHHHHcCCccCCCCceeeEEEEECC---CCcEEEEEe
Confidence 985 45566676654 22111122333 6889999998 8999999999 999987744
No 187
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.69 E-value=9.8e-18 Score=147.04 Aligned_cols=118 Identities=17% Similarity=0.153 Sum_probs=99.4
Q ss_pred HHhhccchhHHHHHhhcccccCC--CCCEEecccc-CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEe
Q 013684 37 FLIMSLSQWYVQQLRRRMTSTKE--IGEEVKVSDL-EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVS 113 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~~~--~g~~v~l~~~-~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs 113 (438)
+.+|..+|+|+ +.+. +|+.+.++++ +||+++|+||++||++|+.+.|.|.+++++ + +.+++|+
T Consensus 22 ~~~G~~~P~f~--------l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~--v~vv~v~ 87 (168)
T 2b1k_A 22 ALIGKPVPKFR--------LESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----G--IRVVGMN 87 (168)
T ss_dssp TTTTSBCCCCE--------EEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----T--CCEEEEE
T ss_pred cccCCcCCCeE--------eecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC----C--CEEEEEE
Confidence 35899999999 8898 9999999985 899999999999999999999999988775 3 8899999
Q ss_pred cCCCHHHHHHhHhcCCccccc-CCChHHHHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 114 SDEDLNAFNNYRACMPWLAVP-YSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 114 ~D~~~~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+|.+.+.+.++.+++++.... ..+.. ..+++.|++.++|++++||+ +|+++.+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~lid~---~G~i~~~~~ 143 (168)
T 2b1k_A 88 YKDDRQKAISWLKELGNPYALSLFDGD--GMLGLDLGVYGAPETFLIDG---NGIIRYRHA 143 (168)
T ss_dssp ESCCHHHHHHHHHHHCCCCSEEEEETT--CHHHHHHTCCSSSEEEEECT---TSBEEEEEE
T ss_pred CCCChHHHHHHHHHcCCCCceeeECcc--hHHHHHcCccccCEEEEECC---CCeEEEEEe
Confidence 999999999999876543221 11332 67899999999999999999 999986643
No 188
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.68 E-value=4e-17 Score=150.14 Aligned_cols=122 Identities=19% Similarity=0.229 Sum_probs=100.1
Q ss_pred HHHhhccchhHHHHHhhccccc---CCCCCEEeccccCCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEE
Q 013684 36 RFLIMSLSQWYVQQLRRRMTST---KEIGEEVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVF 111 (438)
Q Consensus 36 ~~~~g~~~p~f~~~~~~~~~~~---~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~ 111 (438)
.+.+|.++|+|+ +. +.+|+.+++++++||+++|+|| ++||++|+.++|.|+++++++++.+ ++||+
T Consensus 26 ~l~~G~~aP~f~--------l~~~~~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~--v~vv~ 95 (220)
T 1zye_A 26 APAVTQHAPYFK--------GTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVN--CEVVA 95 (220)
T ss_dssp -CCTTSBCCCCE--------EEEECSSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTT--EEEEE
T ss_pred cccCCCCCCCcE--------EEeeeCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--CEEEE
Confidence 346899999999 65 4678999999999999999999 9999999999999999999998865 99999
Q ss_pred EecCCCHHHHHHhHhcC-------CcccccCCChHHHHHHhhhcCcC------ccceEEEecCCCCCCCcccccc
Q 013684 112 VSSDEDLNAFNNYRACM-------PWLAVPYSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 112 vs~D~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~l~~~~~v~------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
|++| +.+...++.+.+ ++....+.|.. ..+.+.|++. .+|+++|||+ +|+++.+..
T Consensus 96 Is~D-~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~--~~i~~~ygv~~~~~g~~~P~~~liD~---~G~I~~~~~ 164 (220)
T 1zye_A 96 VSVD-SHFSHLAWINTPRKNGGLGHMNIALLSDLT--KQISRDYGVLLEGPGLALRGLFIIDP---NGVIKHLSV 164 (220)
T ss_dssp EESS-CHHHHHHHHTSCGGGTCCCSCSSEEEECTT--SHHHHHTTCEETTTTEECEEEEEECT---TSBEEEEEE
T ss_pred EECC-CHHHHHHHHHHHHHhCCCcCCceEEEECCc--HHHHHHhCCeecCCCcccceEEEECC---CCEEEEEEe
Confidence 9998 456667777654 22211122333 6889999999 9999999999 999987754
No 189
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.68 E-value=3e-16 Score=142.76 Aligned_cols=122 Identities=12% Similarity=-0.062 Sum_probs=90.6
Q ss_pred HhhccchhHHHHHhhcccccCCC-CCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC-
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEI-GEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD- 115 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~-g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D- 115 (438)
.....+|+|+ +.+.+ |+.++|++++||+|||+|||+|||+| .++|.|+++++++++.| ++||+|+.|
T Consensus 12 ~~~~~~pdF~--------l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g--~~vlgvs~d~ 80 (207)
T 2r37_A 12 GISGTIYEYG--------ALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFG--LVILGFPCNQ 80 (207)
T ss_dssp ---CCGGGCE--------EEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGT--EEEEEEECCC
T ss_pred cccCccCCeE--------eeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCC--EEEEEEECcc
Confidence 4556789999 89999 99999999999999999999999999 78999999999999876 999999975
Q ss_pred ------CCHHHHHHhHh------cCCcccccCCChH--------HHHHHhhhc---------------------CcCccc
Q 013684 116 ------EDLNAFNNYRA------CMPWLAVPYSDLE--------TKKALNRKF---------------------DIEGIP 154 (438)
Q Consensus 116 ------~~~~~~~~~~~------~~~~~~~~~~d~~--------~~~~l~~~~---------------------~v~~~P 154 (438)
.+.++.++|++ +++.....+.+.+ .-..+.... .+...|
T Consensus 81 f~~~e~~~~~~i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ 160 (207)
T 2r37_A 81 FGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNF 160 (207)
T ss_dssp BTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTT
T ss_pred cCcCCCCCHHHHHHHHHhcchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccc
Confidence 24577888887 6654322222111 001122211 133448
Q ss_pred eEEEecCCCCCCCcccccc
Q 013684 155 CLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 155 ~~~lvd~~~~~G~v~~~~~ 173 (438)
++||||+ +|+++.+..
T Consensus 161 ttflID~---~G~i~~~~~ 176 (207)
T 2r37_A 161 EKFLVGP---DGIPIMRWH 176 (207)
T ss_dssp CEEEECT---TSCEEEEEC
T ss_pred eEEEECC---CCcEEEEEC
Confidence 9999999 999987753
No 190
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.68 E-value=1.2e-17 Score=146.47 Aligned_cols=117 Identities=13% Similarity=0.080 Sum_probs=98.8
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE 116 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~ 116 (438)
.+|.++|+|+ +.+.+|+.+++++++||+++|+|| ++||++|+.++|.|++++++ . +++|++|+.|
T Consensus 21 ~~G~~aP~f~--------l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~--~~~vv~is~d- 86 (166)
T 3p7x_A 21 NEGDFAPDFT--------VLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---E--EGIVLTISAD- 86 (166)
T ss_dssp CTTSBCCCCE--------EECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---T--TSEEEEEESS-
T ss_pred CCCCCCCCeE--------EEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---C--CCEEEEEECC-
Confidence 4799999999 999999999999999999999999 78999999999999999887 3 4999999988
Q ss_pred CHHHHHHhHhcCCc-ccccCCCh-HHHHHHhhhcCcCc------cceEEEecCCCCCCCcccccc
Q 013684 117 DLNAFNNYRACMPW-LAVPYSDL-ETKKALNRKFDIEG------IPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 117 ~~~~~~~~~~~~~~-~~~~~~d~-~~~~~l~~~~~v~~------~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+.+.+++|.+++++ ....+.|. + ..+.+.|++.. +|+++|||+ +|++++...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~l~D~~~--~~~~~~~gv~~~~~g~~~p~~~liD~---~G~i~~~~~ 146 (166)
T 3p7x_A 87 LPFAQKRWCASAGLDNVITLSDHRD--LSFGENYGVVMEELRLLARAVFVLDA---DNKVVYKEI 146 (166)
T ss_dssp CHHHHHHHHHHHTCSSCEEEECTTT--CHHHHHHTCEETTTTEECCEEEEECT---TCBEEEEEE
T ss_pred CHHHHHHHHHHcCCCceEEccCCch--hHHHHHhCCccccCCceeeEEEEECC---CCeEEEEEE
Confidence 56778888886654 22222244 3 58899999985 899999999 999998754
No 191
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.68 E-value=3.6e-17 Score=152.35 Aligned_cols=120 Identities=20% Similarity=0.192 Sum_probs=98.3
Q ss_pred HhhccchhHHHHHhhcccccC---CCCCEEeccccCCCEEEEEEec-cCCccchhhHHHHHHHHHHHhcCCCCEEEEEEe
Q 013684 38 LIMSLSQWYVQQLRRRMTSTK---EIGEEVKVSDLEGKVTALYFSA-NWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVS 113 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~---~~g~~v~l~~~~gk~vll~F~a-~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs 113 (438)
.+|.++|+|+ +.+ .+|+.++|++++||+++|+||+ +||++|+.++|.|++++++|++.| ++|++||
T Consensus 49 ~vG~~aPdF~--------l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~g--v~vv~Is 118 (240)
T 3qpm_A 49 KISKPAPQWE--------GTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAIN--TEVVACS 118 (240)
T ss_dssp CTTSBCCCCE--------EEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTT--EEEEEEE
T ss_pred CCCCCCCCcE--------eeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCC--CEEEEEE
Confidence 4899999999 664 4567999999999999999999 999999999999999999999876 9999999
Q ss_pred cCCCHHHHHHhHhcC-------CcccccCCChHHHHHHhhhcCcC------ccceEEEecCCCCCCCcccccc
Q 013684 114 SDEDLNAFNNYRACM-------PWLAVPYSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 114 ~D~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~l~~~~~v~------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
.|. .+...++.+.. ++....+.|.+ ..+.+.|++. .+|++||||+ +|+++....
T Consensus 119 ~D~-~~~~~~~~~~~~~~~~~~~~~fp~l~D~~--~~v~~~ygv~~~~~g~~~p~~flID~---~G~I~~~~~ 185 (240)
T 3qpm_A 119 VDS-QFTHLAWIITPRKQGGLGPMKIPLLSDLT--HQISKDYGVYLEDQGHTLRGLFIIDE---KGVLRQITM 185 (240)
T ss_dssp SSC-HHHHHHHHHSCGGGTCCCSCSSCEEECTT--SHHHHHTTCEETTTTEECEEEEEECT---TSBEEEEEE
T ss_pred CCC-HHHHHHHHHHHHhhcCCCCCceeEEeCch--HHHHHHhCCccccCCCccceEEEEcC---CCeEEEEEe
Confidence 985 45566666653 22221222443 6899999997 7899999999 999987754
No 192
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.68 E-value=1.7e-17 Score=143.32 Aligned_cols=119 Identities=14% Similarity=0.173 Sum_probs=97.8
Q ss_pred HHHhhccchhHHHHHhhcccccCCCC--------CEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCE
Q 013684 36 RFLIMSLSQWYVQQLRRRMTSTKEIG--------EEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDF 107 (438)
Q Consensus 36 ~~~~g~~~p~f~~~~~~~~~~~~~~g--------~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~ 107 (438)
...+|..+|+|+ +.+.+| +.+++++++||+++|+||++||++|+.+.|.|.+++++ .++
T Consensus 7 ~~~~g~~~p~f~--------l~~~~g~~~~~~~~~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-----~~v 73 (156)
T 1kng_A 7 SALIGRPAPQTA--------LPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD-----KRF 73 (156)
T ss_dssp -----CBCCCCC--------BCCCTTCEETTEECCCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC-----TTS
T ss_pred hHHhCCCCCCce--------eeeccCcccccccCceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc-----CCe
Confidence 456899999999 899999 89999999999999999999999999999999988775 249
Q ss_pred EEEEEecCCCHHHHHHhHhcCCcccc-cCCChHHHHHHhhhcCcCccceEEEecCCCCCCCccccc
Q 013684 108 EVVFVSSDEDLNAFNNYRACMPWLAV-PYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 108 ~iv~vs~D~~~~~~~~~~~~~~~~~~-~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
.++.|++|.+.+.++++.+++++... ...+.. ..+++.|++.++|++++||+ +|+++.+.
T Consensus 74 ~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~v~~~P~~~~id~---~G~i~~~~ 134 (156)
T 1kng_A 74 QLVGINYKDAADNARRFLGRYGNPFGRVGVDAN--GRASIEWGVYGVPETFVVGR---EGTIVYKL 134 (156)
T ss_dssp EEEEEEESCCHHHHHHHHHHHCCCCSEEEEETT--SHHHHHTTCCSSCEEEEECT---TSBEEEEE
T ss_pred EEEEEECCCCHHHHHHHHHHcCCCCceeeeCch--hHHHHhcCcCccCeEEEEcC---CCCEEEEE
Confidence 99999999999999999987654322 111322 68899999999999999999 99988654
No 193
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.68 E-value=3.6e-17 Score=143.05 Aligned_cols=119 Identities=14% Similarity=0.193 Sum_probs=100.3
Q ss_pred HhhccchhHHHHHhhccccc--CCCC--CEEeccc-cCCCEEEEEEe-ccCCccch-hhHHHHHHHHHHHhcCCCCEE-E
Q 013684 38 LIMSLSQWYVQQLRRRMTST--KEIG--EEVKVSD-LEGKVTALYFS-ANWYPPCG-NFTGVLVDVYEELRNNGSDFE-V 109 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~--~~~g--~~v~l~~-~~gk~vll~F~-a~wC~~C~-~~~p~l~~l~~~~~~~~~~~~-i 109 (438)
.+|+.+|+|+ +. +.+| +.+++++ ++||+++|+|| ++||++|+ .++|.|+++++++++.| ++ |
T Consensus 5 ~~G~~aP~f~--------l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~--v~~v 74 (162)
T 1tp9_A 5 AVGDVLPDGK--------LAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKG--VTEI 74 (162)
T ss_dssp CTTCBCCCCE--------EEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT--CCCE
T ss_pred CCCCCCCCeE--------EEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCEE
Confidence 4799999999 75 8899 9999999 89999999999 89999999 99999999999999876 99 9
Q ss_pred EEEecCCCHHHHHHhHhcCCc--ccccCCChHHHHHHhhhcCcC-----------ccceEEEecCCCCCCCcccccc
Q 013684 110 VFVSSDEDLNAFNNYRACMPW--LAVPYSDLETKKALNRKFDIE-----------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 110 v~vs~D~~~~~~~~~~~~~~~--~~~~~~d~~~~~~l~~~~~v~-----------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
++||.| +.+..++|.++++. ......|.+ ..+.+.|++. .+|+++||| +|++++...
T Consensus 75 v~Is~d-~~~~~~~~~~~~~~~~~~~~l~D~~--~~~~~~~gv~~~~~~~g~~~~~~p~~~vid----~G~i~~~~~ 144 (162)
T 1tp9_A 75 LCISVN-DPFVMKAWAKSYPENKHVKFLADGS--ATYTHALGLELDLQEKGLGTRSRRFALLVD----DLKVKAANI 144 (162)
T ss_dssp EEEESS-CHHHHHHHHHTCTTCSSEEEEECTT--SHHHHHTTCEEEETTTTSEEEECCEEEEEE----TTEEEEEEE
T ss_pred EEEECC-CHHHHHHHHHhcCCCCCeEEEECCC--chHHHHcCcccccccCCCCccceeEEEEEE----CCEEEEEEe
Confidence 999998 56778888887765 222233544 7889999986 389999997 899987754
No 194
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.67 E-value=2.7e-16 Score=143.79 Aligned_cols=121 Identities=14% Similarity=-0.016 Sum_probs=91.3
Q ss_pred hhccchhHHHHHhhcccccCCC-CCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC--
Q 013684 39 IMSLSQWYVQQLRRRMTSTKEI-GEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD-- 115 (438)
Q Consensus 39 ~g~~~p~f~~~~~~~~~~~~~~-g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D-- 115 (438)
.+..+|+|+ +++.+ |+.++|++++||+|||+|||+|||+|+ ++|.|++++++|++.| ++||+|+.|
T Consensus 31 ~~~~~pdF~--------l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g--~~Vlgvs~d~f 99 (215)
T 2i3y_A 31 EKGTIYDYE--------AIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYG--LVVLGFPCNQF 99 (215)
T ss_dssp CCCCGGGCE--------EEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGT--EEEEEEECCCS
T ss_pred ccCCcCCcE--------eeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCC--eEEEEEEcccc
Confidence 355789999 89999 999999999999999999999999999 9999999999999876 999999975
Q ss_pred -----CCHHHHHHhHh------cCCcccccCCChH----H----HHHHhhh-------c--------------CcCccce
Q 013684 116 -----EDLNAFNNYRA------CMPWLAVPYSDLE----T----KKALNRK-------F--------------DIEGIPC 155 (438)
Q Consensus 116 -----~~~~~~~~~~~------~~~~~~~~~~d~~----~----~~~l~~~-------~--------------~v~~~P~ 155 (438)
.+.++.++|++ +++..+..+.+.+ . -..+... + .|...|+
T Consensus 100 ~~~e~~~~~~i~~f~~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npt 179 (215)
T 2i3y_A 100 GKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFE 179 (215)
T ss_dssp TTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTC
T ss_pred CcCCCCCHHHHHHHHHhccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCce
Confidence 24577888887 6654322222111 0 0112211 1 1233489
Q ss_pred EEEecCCCCCCCcccccc
Q 013684 156 LVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 156 ~~lvd~~~~~G~v~~~~~ 173 (438)
.||||+ +|+++.+..
T Consensus 180 tfLID~---~G~vv~~~~ 194 (215)
T 2i3y_A 180 KFLVGP---DGIPVMRWS 194 (215)
T ss_dssp EEEECT---TSCEEEEEC
T ss_pred EEEECC---CCeEEEEeC
Confidence 999999 999987753
No 195
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.67 E-value=1.7e-17 Score=144.43 Aligned_cols=118 Identities=12% Similarity=0.115 Sum_probs=99.0
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCC--EEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEec
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGK--VTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSS 114 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk--~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~ 114 (438)
.+|..+|+|+ +.+.+|+.+++++++|| +++|+|| ++||++|+.++|.|+++++++++++ +|++|+.
T Consensus 8 ~~G~~~P~f~--------l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~---~vv~is~ 76 (159)
T 2a4v_A 8 EIGDPIPDLS--------LLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA---AVFGLSA 76 (159)
T ss_dssp CTTCBCCSCE--------EECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC---EEEEEES
T ss_pred CCCCCCCCeE--------EECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC---cEEEEeC
Confidence 4799999999 89999999999999887 8999997 9999999999999999999998763 8999999
Q ss_pred CCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccc------eEEEecCCCCCCCcccccc
Q 013684 115 DEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIP------CLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 115 D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P------~~~lvd~~~~~G~v~~~~~ 173 (438)
| +.+..++|.+++++....+.|.+ ..+.+.|++...| +++|| + +|+++....
T Consensus 77 d-~~~~~~~~~~~~~~~~~~l~D~~--~~~~~~~gv~~~p~~g~~~~~~li-~---~G~i~~~~~ 134 (159)
T 2a4v_A 77 D-SVTSQKKFQSKQNLPYHLLSDPK--REFIGLLGAKKTPLSGSIRSHFIF-V---DGKLKFKRV 134 (159)
T ss_dssp C-CHHHHHHHHHHHTCSSEEEECTT--CHHHHHHTCBSSSSSCBCCEEEEE-E---TTEEEEEEE
T ss_pred C-CHHHHHHHHHHhCCCceEEECCc--cHHHHHhCCcccccCCccceEEEE-c---CCEEEEEEc
Confidence 8 56778888886654322222433 6789999999888 88999 9 999987753
No 196
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.67 E-value=4e-17 Score=144.58 Aligned_cols=117 Identities=14% Similarity=0.099 Sum_probs=94.9
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccC-CccchhhHHHHHHHHHHHhcCCCCEEEEEEecCC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANW-YPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE 116 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~w-C~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~ 116 (438)
.+|..+|+|+ +.+.+|+.+++++++||+++|+||++| |++|+.++|.|++++++ . ++++++|++|
T Consensus 19 ~~G~~~P~f~--------l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~--~v~vv~Is~D- 84 (175)
T 1xvq_A 19 AVGSPAPAFT--------LTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---S--GATVLCVSKD- 84 (175)
T ss_dssp CTTSBCCCCE--------EECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---T--TCEEEEEESS-
T ss_pred CcCCcCCCeE--------EECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---c--CCEEEEEECC-
Confidence 4799999999 899999999999999999999999999 99999999999999988 3 3999999997
Q ss_pred CHHHHHHhHhcCCccccc-CCChHHHHHHhhhcCcCcc---------ceEEEecCCCCCCCcccccc
Q 013684 117 DLNAFNNYRACMPWLAVP-YSDLETKKALNRKFDIEGI---------PCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~v~~~---------P~~~lvd~~~~~G~v~~~~~ 173 (438)
+.+..++|.+++++..++ +.|.. ..+.+.|++... |+++|||+ +|+++....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~D~~--~~~~~~~gv~~~~~~~~g~~~p~~~lid~---~G~I~~~~~ 146 (175)
T 1xvq_A 85 LPFAQKRFCGAEGTENVMPASAFR--DSFGEDYGVTIADGPMAGLLARAIVVIGA---DGNVAYTEL 146 (175)
T ss_dssp CHHHHTTCC------CEEEEECTT--SSHHHHTTCBBCSSTTTTSBCSEEEEECT---TSBEEEEEE
T ss_pred CHHHHHHHHHHcCCCCceEeeCCH--HHHHHHhCCcccccccCCcccceEEEECC---CCeEEEEEE
Confidence 456677888776652222 22433 678899999877 99999999 999997753
No 197
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.67 E-value=3.4e-17 Score=144.32 Aligned_cols=117 Identities=13% Similarity=0.064 Sum_probs=97.9
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE 116 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~ 116 (438)
.+|..+|+|+ +.+.+|+.+++++++||+++|+|| ++||++|+.++|.|+++++++ . ++++++|+.|
T Consensus 22 ~~g~~~P~f~--------l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~--~v~vv~Is~d- 88 (171)
T 2yzh_A 22 KVGDRAPEAV--------VVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--E--GVDVTVVSMD- 88 (171)
T ss_dssp CTTSBCCCEE--------EEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--T--TEEEEEEESS-
T ss_pred CCCCcCCceE--------EECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--C--CceEEEEeCC-
Confidence 4789999999 899999999999999999999999 899999999999999999998 3 4999999998
Q ss_pred CHHHHHHhHhcCCc-ccccCCC-hHHHHHHhhhcCcC---------ccceEEEecCCCCCCCcccccc
Q 013684 117 DLNAFNNYRACMPW-LAVPYSD-LETKKALNRKFDIE---------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 117 ~~~~~~~~~~~~~~-~~~~~~d-~~~~~~l~~~~~v~---------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+.+..++|.+++++ ....+.| .+ ..+ +.|++. .+|+++|||+ +|+++....
T Consensus 89 ~~~~~~~~~~~~~~~~~~~l~D~~~--~~~-~~~gv~~~~~~~~g~~~p~~~liD~---~G~i~~~~~ 150 (171)
T 2yzh_A 89 LPFAQKRFCESFNIQNVTVASDFRY--RDM-EKYGVLIGEGALKGILARAVFIIDK---EGKVAYVQL 150 (171)
T ss_dssp CHHHHHHHHHHTTCCSSEEEECTTT--CGG-GGGTCBBCSSTTTTSBCCEEEEECT---TSBEEEEEE
T ss_pred CHHHHHHHHHHcCCCCeEEeecCcc--CcH-HHhCCEecccccCCceeeEEEEEcC---CCeEEEEEe
Confidence 46678888887655 2222224 33 567 899986 2699999999 999987754
No 198
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.67 E-value=5.3e-17 Score=159.10 Aligned_cols=127 Identities=13% Similarity=0.020 Sum_probs=103.5
Q ss_pred HHhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC-
Q 013684 37 FLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD- 115 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D- 115 (438)
+.+|..+|+|+ ....+ +.+.+|+.+++++++||++||+||++||++|+.++|.|.++++++++.+ ++|++|++|
T Consensus 51 l~vG~~aPdF~--~~~~w-L~d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~--v~vi~Vs~d~ 125 (352)
T 2hyx_A 51 LESCGTAPDLK--GITGW-LNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSG--LAVIGVHTPE 125 (352)
T ss_dssp CCCCCBCCCCC--SCCEE-ESSGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGT--EEEEEEECCS
T ss_pred cCCCCcCCCcc--ccccc-cCCCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCC--eEEEEEECCc
Confidence 35788899887 00001 4588999999999999999999999999999999999999999998865 999999975
Q ss_pred ----CCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 116 ----EDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 116 ----~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
++.+.++++++++++......|.. ..+.+.|+|..+|+++|||+ +|+++.+..
T Consensus 126 ~~~~d~~~~~~~~~~~~~l~fpv~~D~~--~~l~~~ygV~~~Pt~~lID~---~G~Iv~~~~ 182 (352)
T 2hyx_A 126 YAFEKVPGNVAKGAANLGISYPIALDNN--YATWTNYRNRYWPAEYLIDA---TGTVRHIKF 182 (352)
T ss_dssp SGGGGCHHHHHHHHHHHTCCSCEEECTT--SHHHHHTTCCEESEEEEECT---TSBEEEEEE
T ss_pred ccccCCHHHHHHHHHHcCCCccEEeCCc--HHHHHHcCCCccCEEEEEeC---CCeEEEEEc
Confidence 578889999987654322222333 67899999999999999999 999987643
No 199
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.65 E-value=9.4e-17 Score=150.63 Aligned_cols=121 Identities=20% Similarity=0.202 Sum_probs=98.3
Q ss_pred HHhhccchhHHHHHhhccccc---CCCCCEEeccccCCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEE
Q 013684 37 FLIMSLSQWYVQQLRRRMTST---KEIGEEVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFV 112 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~---~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~v 112 (438)
+.+|.++|+|+ +. +.+|+.++|++++||+++|+|| ++||++|+.++|.|++++++|++.| ++||+|
T Consensus 62 l~vG~~aPdF~--------l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~g--v~vv~I 131 (254)
T 3tjj_A 62 AKISKPAPYWE--------GTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSIN--TEVVAC 131 (254)
T ss_dssp CCTTSBCCCCE--------EEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTT--EEEEEE
T ss_pred cCCCCCCCCcE--------eeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcC--CEEEEE
Confidence 34799999999 66 4467899999999999999999 9999999999999999999999876 999999
Q ss_pred ecCCCHHHHHHhHhcC-------CcccccCCChHHHHHHhhhcCcC------ccceEEEecCCCCCCCcccccc
Q 013684 113 SSDEDLNAFNNYRACM-------PWLAVPYSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 113 s~D~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~l~~~~~v~------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
++|. .+...++.+.. ++....+.|.+ ..+++.|++. .+|++||||+ +|+|+....
T Consensus 132 S~D~-~~~~~~~~~~~~~~~g~~~~~fp~l~D~~--~~va~~ygv~~~~~g~~~p~tflID~---~G~I~~~~~ 199 (254)
T 3tjj_A 132 SVDS-QFTHLAWINTPRRQGGLGPIRIPLLSDLT--HQISKDYGVYLEDSGHTLRGLFIIDD---KGILRQITL 199 (254)
T ss_dssp ESSC-HHHHHHHHTSCGGGTSCCSCSSCEEECTT--SHHHHHHTCEETTTTEECEEEEEECT---TSBEEEEEE
T ss_pred cCCC-HHHHHHHHHHHHHhcCCcccccceeeCcH--HHHHHHcCCccccCCCccceEEEECC---CCeEEEEEe
Confidence 9984 45566666643 22211122443 6899999996 5899999999 999987754
No 200
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.65 E-value=5.6e-16 Score=150.33 Aligned_cols=110 Identities=16% Similarity=0.154 Sum_probs=96.4
Q ss_pred CCCCCcc-CCCCCceeeccccCCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHH
Q 013684 215 HDRGYLL-GHPPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTS 292 (438)
Q Consensus 215 ~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~ 292 (438)
.+|+|+| +.+|+ ++++++++||+|+|+|| +.|||.|..+++.+.+. . .++++|++||.| +.+.
T Consensus 3 k~p~F~l~~~~G~-~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~~------~-------~~~~~v~gis~D-~~~~ 67 (322)
T 4eo3_A 3 RVKHFELLTDEGK-TFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSRE------N-------FEKAQVVGISRD-SVEA 67 (322)
T ss_dssp BCCCCEEEETTSC-EEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHHS------C-------CTTEEEEEEESC-CHHH
T ss_pred CCCCcEEECCCcC-EEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHH------h-------hCCCEEEEEeCC-CHHH
Confidence 5899999 99999 99999999999999999 57999999988876531 1 247999999998 6678
Q ss_pred HHHHHhcCCCcccccCCchhHHHHHhcCc----CceeeEEEECCCCcEEEcc
Q 013684 293 FESYFGTMPWLALPFGDPTIKELTKYFDV----QGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 293 ~~~~~~~~~~~~~p~~~d~~~~l~~~~~v----~~~P~~~lid~~G~i~~~~ 340 (438)
.++|.++++ ++||++.|.++++++.||| ..+|++||||++|+|++..
T Consensus 68 ~~~f~~~~~-l~fp~l~D~~~~v~~~ygv~~~~~~~r~tfiId~~G~i~~~~ 118 (322)
T 4eo3_A 68 LKRFKEKND-LKVTLLSDPEGILHEFFNVLENGKTVRSTFLIDRWGFVRKEW 118 (322)
T ss_dssp HHHHHHHHT-CCSEEEECTTCHHHHHTTCEETTEECCEEEEECTTSBEEEEE
T ss_pred HHHHHHhhC-CceEEEEcCchHHHHhcCCCCCCcCccEEEEECCCCEEEEEE
Confidence 888998887 8999999999999999999 4588999999999998763
No 201
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.65 E-value=1e-16 Score=141.59 Aligned_cols=121 Identities=17% Similarity=0.160 Sum_probs=98.6
Q ss_pred HHHhhccchhHHHHHhhccccc-CCCCCEEeccc-cCCCEEEE-EEeccCCccch-hhHHHHHHHHHHHhcCCCCEEEEE
Q 013684 36 RFLIMSLSQWYVQQLRRRMTST-KEIGEEVKVSD-LEGKVTAL-YFSANWYPPCG-NFTGVLVDVYEELRNNGSDFEVVF 111 (438)
Q Consensus 36 ~~~~g~~~p~f~~~~~~~~~~~-~~~g~~v~l~~-~~gk~vll-~F~a~wC~~C~-~~~p~l~~l~~~~~~~~~~~~iv~ 111 (438)
...+|.++|+|+ +. +.+|+.++|++ ++||+++| +||++|||+|+ .++|.|++++++|++.| +++|+
T Consensus 14 ~~~vG~~aPdf~--------l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~g--v~vv~ 83 (173)
T 3mng_A 14 PIKVGDAIPAVE--------VFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKG--VQVVA 83 (173)
T ss_dssp CCCTTCBCCCCE--------EECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTT--CCEEE
T ss_pred CCCCCCCCCCeE--------eeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCC--CEEEE
Confidence 345899999999 88 99999999999 59996655 55599999999 69999999999999877 99997
Q ss_pred -EecCCCHHHHHHhHhcCCcc--cccCCChHHHHHHhhhcCcC-------------ccceEEEecCCCCCCCcccccc
Q 013684 112 -VSSDEDLNAFNNYRACMPWL--AVPYSDLETKKALNRKFDIE-------------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 112 -vs~D~~~~~~~~~~~~~~~~--~~~~~d~~~~~~l~~~~~v~-------------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
||.| +.+..++|.++.+.. .....|.+ .++++.||+. ..|+++||| +|+|++...
T Consensus 84 ~iS~D-~~~~~~~f~~~~~~~~~fp~l~D~~--~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID----dG~I~~~~v 154 (173)
T 3mng_A 84 CLSVN-DAFVTGEWGRAHKAEGKVRLLADPT--GAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ----DGIVKALNV 154 (173)
T ss_dssp EEESS-CHHHHHHHHHHTTCTTTCEEEECTT--CHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE----TTEEEEEEE
T ss_pred EEcCC-CHHHHHHHHHHhCCCCceEEEECCC--hHHHHHhCCCcccccccccCCcceEEEEEEEE----CCEEEEEEE
Confidence 9988 567788888877654 22233544 7889999885 359999998 899987765
No 202
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.63 E-value=5.8e-17 Score=144.69 Aligned_cols=120 Identities=13% Similarity=0.155 Sum_probs=98.3
Q ss_pred HHhhccchhHHHHHhhcccccCC--CC-CEEeccc-cCCCE-EEEEEeccCCccchh-hHHHHHHHHHHHhcCCCCEE-E
Q 013684 37 FLIMSLSQWYVQQLRRRMTSTKE--IG-EEVKVSD-LEGKV-TALYFSANWYPPCGN-FTGVLVDVYEELRNNGSDFE-V 109 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~~~--~g-~~v~l~~-~~gk~-vll~F~a~wC~~C~~-~~p~l~~l~~~~~~~~~~~~-i 109 (438)
+.+|.++|+|+ +.+. +| +.++|++ ++||+ ||++||++|||+|+. ++|.|++++++|++.| ++ |
T Consensus 26 l~vG~~aPdf~--------l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g--v~~v 95 (184)
T 3uma_A 26 IAVGDKLPNAT--------FKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARG--VDDI 95 (184)
T ss_dssp CCTTCBCCCCE--------EEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTT--CCEE
T ss_pred CCCCCCCCCcE--------eecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcC--CCEE
Confidence 35899999999 8888 99 9999999 89995 555667999999999 7999999999999877 88 9
Q ss_pred EEEecCCCHHHHHHhHhcCCcc--cccCCChHHHHHHhhhcCcC-----------ccceEEEecCCCCCCCcccccc
Q 013684 110 VFVSSDEDLNAFNNYRACMPWL--AVPYSDLETKKALNRKFDIE-----------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 110 v~vs~D~~~~~~~~~~~~~~~~--~~~~~d~~~~~~l~~~~~v~-----------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
++||.| +.+..++|.++.+.. .....|.+ ..+++.||+. ..|+++|| . +|+|++...
T Consensus 96 v~Is~d-~~~~~~~f~~~~~~~~~fp~l~D~~--~~va~~yGv~~~~~~~g~g~~~~r~tfiI-d---dG~I~~~~~ 165 (184)
T 3uma_A 96 AVVAVN-DLHVMGAWATHSGGMGKIHFLSDWN--AAFTKAIGMEIDLSAGTLGIRSKRYSMLV-E---DGVVKALNI 165 (184)
T ss_dssp EEEESS-CHHHHHHHHHHHTCTTTSEEEECTT--CHHHHHTTCEEEEGGGTCEEEECCEEEEE-E---TTEEEEEEE
T ss_pred EEEECC-CHHHHHHHHHHhCCCCceEEEEcCc--hHHHHHcCCceeccccCCcccceeEEEEE-C---CCEEEEEEE
Confidence 999998 567788888876654 22233544 7899999985 35889999 5 999987765
No 203
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.63 E-value=1.4e-16 Score=139.87 Aligned_cols=122 Identities=20% Similarity=0.324 Sum_probs=97.7
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCcc-chhhHHHHHHHHHHHhcCC-CCEEEEEEecC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPP-CGNFTGVLVDVYEELRNNG-SDFEVVFVSSD 115 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~-C~~~~p~l~~l~~~~~~~~-~~~~iv~vs~D 115 (438)
++|..+|+|+ +.+.+| .+++++++||+++|+||++||++ |+.++|.|.++++++++.+ .++++++|++|
T Consensus 11 ~~G~~~p~f~--------l~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d 81 (172)
T 2k6v_A 11 LLNPKPVDFA--------LEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVD 81 (172)
T ss_dssp EEEEEECCCE--------EECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESC
T ss_pred ccCCCCCCeE--------EEcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEEC
Confidence 3688899999 899999 99999999999999999999997 9999999999999987641 24999999998
Q ss_pred C---CHHHHHHhHhcCC--cccccCCChHHHHHHhhhcC---------------cCccceEEEecCCCCCCCcccccc
Q 013684 116 E---DLNAFNNYRACMP--WLAVPYSDLETKKALNRKFD---------------IEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 116 ~---~~~~~~~~~~~~~--~~~~~~~d~~~~~~l~~~~~---------------v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
. +.+.+++|.++++ |..+.. +......+.+.|+ +.++|+++||| +|+++.+..
T Consensus 82 ~~~d~~~~~~~~~~~~~~~~~~l~d-~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid----~G~i~~~~~ 154 (172)
T 2k6v_A 82 PERDPPEVADRYAKAFHPSFLGLSG-SPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK----EGRLVLLYS 154 (172)
T ss_dssp TTTCCHHHHHHHHHHHCTTEEEECC-CHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE----TTEEEEEEC
T ss_pred CCCCCHHHHHHHHHHhCCCcEEEeC-CHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE----CCEEEEEEC
Confidence 4 5678888888655 443332 2222256766665 46889999999 898887654
No 204
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.62 E-value=2.2e-16 Score=146.12 Aligned_cols=119 Identities=13% Similarity=0.232 Sum_probs=97.3
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCC-EEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGK-VTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD 115 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk-~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D 115 (438)
.+|+.+|+|+ +.+.+| .+++++++|| +++|+|| ++|||+|+.+++.|++++++|+++| ++||+||+|
T Consensus 4 ~iG~~aPdF~--------l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~--v~vigIS~D 72 (233)
T 2v2g_A 4 TLGEVFPNFE--------ADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRG--VKLIALSCD 72 (233)
T ss_dssp CTTCBCCCCE--------EEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTT--EEEEEEESS
T ss_pred CCCCCCCCcE--------EecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcC--CEEEEEcCC
Confidence 5799999999 899999 8999999998 9999998 9999999999999999999999876 999999998
Q ss_pred CCHHHHHHhHh------cC--CcccccCCChHHHHHHhhhcCcC------------ccceEEEecCCCCCCCcccccc
Q 013684 116 EDLNAFNNYRA------CM--PWLAVPYSDLETKKALNRKFDIE------------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 116 ~~~~~~~~~~~------~~--~~~~~~~~d~~~~~~l~~~~~v~------------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
. .+...+|.+ +. ++......|.+ .++++.|++. .+|++||||+ +|+++....
T Consensus 73 ~-~~~~~~~~~~i~~~~~~~~~~~fpil~D~~--~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~---~G~I~~~~~ 144 (233)
T 2v2g_A 73 N-VADHKEWSEDVKCLSGVKGDMPYPIIADET--RELAVKLGMVDPDERTSTGMPLTCRAVFIIGP---DKKLKLSIL 144 (233)
T ss_dssp C-HHHHHHHHHHHHHHHTCCSSCSSCEEECTT--CHHHHHTTCEEEEEECTTCCEEECEEEEEECT---TSBEEEEEE
T ss_pred C-HHHHHHHHHHHHHhhCcccCCceEEEECCh--HHHHHHhCCcCcccccCCCcccccceEEEECC---CCEEEEEEe
Confidence 5 455556665 33 32211122433 6789999985 5899999999 999987754
No 205
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=99.62 E-value=1.8e-16 Score=122.91 Aligned_cols=81 Identities=33% Similarity=0.673 Sum_probs=73.5
Q ss_pred cccCCCCCHHHHHHHHHHHHHHhccCCCccccccc-ccccccccccCCCCCcccCccCCCCCceeEEcCCCCCCccCccc
Q 013684 349 QENAYPFTEAKLEFLEKQMEEEAKNLPRSEFHIGH-RHELNLVSEGTGGGPFICCDCDEQGSGWAYQCLECGYEVHPKCV 427 (438)
Q Consensus 349 g~~~~~~~~~~~~~L~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~c~~C~~~~~~w~~~c~~c~~~~~~~c~ 427 (438)
|+++||||++.+.+|.+.+.+.-+.+|..+.+..| +|+|.+.. ...++|+.|++.+.+|.|+|..|+|+||+.||
T Consensus 1 ~~~a~pfte~~~~~~~~~lhe~Ca~lP~~i~Hp~Hp~H~L~L~~----~~~~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca 76 (89)
T 1v5n_A 1 GSSGSSGTEERLKEIEAKYDEIAKDWPKKVKHVLHEEHELELTR----VQVYTCDKCEEEGTIWSYHCDECDFDLHAKCA 76 (89)
T ss_dssp CCCCCCCCSSCCSHHHHHHHHHTSSSCSEECCSTTTTSCEEEEC----CSSCCCTTTSCCCCSCEEECTTTCCCCCHHHH
T ss_pred CCcccccCHHHHHHHHHHHhHHHHcCCceecCCCCCCCccEEee----CCCeEeCCCCCcCCCcEEEcCCCCCeEcHHhc
Confidence 67899999999999999999999999999999999 69999843 34799999999999999999999999999999
Q ss_pred cccCCC
Q 013684 428 RAVDRG 433 (438)
Q Consensus 428 ~~~~~~ 433 (438)
+.++.+
T Consensus 77 ~~p~~~ 82 (89)
T 1v5n_A 77 LNEDTK 82 (89)
T ss_dssp HCSSCS
T ss_pred CCCCcc
Confidence 866543
No 206
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.61 E-value=1.8e-15 Score=122.26 Aligned_cols=73 Identities=23% Similarity=0.467 Sum_probs=63.2
Q ss_pred ccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchh
Q 013684 233 SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 312 (438)
Q Consensus 233 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~ 312 (438)
+..+|+|+|+|||+||++|+.+.|.+.++++.++ ++.++.|++|..
T Consensus 17 ~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-----------~~~~~~vd~d~~----------------------- 62 (105)
T 3zzx_A 17 EAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-----------DVVFLKVDVDEC----------------------- 62 (105)
T ss_dssp HTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TEEEEEEETTTC-----------------------
T ss_pred hcCCCEEEEEEECCCCCCccCCCcchhhhhhccC-----------CeEEEEEecccC-----------------------
Confidence 3457899999999999999999999999987765 467888887755
Q ss_pred HHHHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 313 KELTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 313 ~~l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
.++++.|+|.++||++++ ++|+++.+.
T Consensus 63 ~~l~~~~~V~~~PT~~~~-~~G~~v~~~ 89 (105)
T 3zzx_A 63 EDIAQDNQIACMPTFLFM-KNGQKLDSL 89 (105)
T ss_dssp HHHHHHTTCCBSSEEEEE-ETTEEEEEE
T ss_pred HHHHHHcCCCeecEEEEE-ECCEEEEEE
Confidence 678999999999999999 899999873
No 207
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.61 E-value=2.3e-15 Score=125.38 Aligned_cols=113 Identities=12% Similarity=0.153 Sum_probs=84.7
Q ss_pred CCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHH
Q 013684 216 DRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFE 294 (438)
Q Consensus 216 ~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~ 294 (438)
.++++. +.+|. .......+||+++|+||++||++|+.+.|.+.++++++++ ++.++.|+++.+.
T Consensus 6 ~~~l~~~~~~~~-~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~----------~v~~~~v~~~~d~---- 70 (126)
T 2l57_A 6 IKQINFQSINVV-ENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG----------KFNIYYARLEEEK---- 70 (126)
T ss_dssp SSCTTTTCCSEE-SSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS----------SCEEEEEETTSSH----
T ss_pred cCCCCccccchh-HHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC----------CeEEEEEeCCCCc----
Confidence 455555 66665 4445566789999999999999999999999999988763 5899999944222
Q ss_pred HHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcccchhhhhccccCCCCCHHHHHHHHHHHHHHhccC
Q 013684 295 SYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL 374 (438)
Q Consensus 295 ~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~i~~~~~~~ 374 (438)
..++++.|+|.++|+++++|++|+++.+. .|. .+ .++|.+.|++.+...
T Consensus 71 -----------------~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~-------~G~----~~---~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 71 -----------------NIDLAYKYDANIVPTTVFLDKEGNKFYVH-------QGL----MR---KNNIETILNSLGVKE 119 (126)
T ss_dssp -----------------HHHHHHHTTCCSSSEEEEECTTCCEEEEE-------ESC----CC---HHHHHHHHHHHCCCC
T ss_pred -----------------hHHHHHHcCCcceeEEEEECCCCCEEEEe-------cCC----CC---HHHHHHHHHHHhccc
Confidence 36789999999999999999999998763 231 22 245666666655443
No 208
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.61 E-value=3.8e-16 Score=143.93 Aligned_cols=120 Identities=13% Similarity=0.191 Sum_probs=94.6
Q ss_pred HHhhccchhHHHHHhhcccccCCCCCEEeccccCCC--EEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEec
Q 013684 37 FLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGK--VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSS 114 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk--~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~ 114 (438)
+.+|+.+|+|+ +.+.+| .+++++++|| +||++||++|||+|..+++.|++++++|+++| ++||+||+
T Consensus 5 l~~G~~aP~F~--------l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~--v~vi~IS~ 73 (224)
T 1prx_A 5 LLLGDVAPNFE--------ANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRN--VKLIALSI 73 (224)
T ss_dssp CCTTCBCCCCE--------EEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTT--EEEEEEES
T ss_pred CCCcCCCCCcE--------EecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCC--CEEEEEcC
Confidence 45899999999 899999 8999999988 56666789999999999999999999999876 99999999
Q ss_pred CCCHHHHHHhHhc----------CCcccccCCChHHHHHHhhhcCcC------------ccceEEEecCCCCCCCccccc
Q 013684 115 DEDLNAFNNYRAC----------MPWLAVPYSDLETKKALNRKFDIE------------GIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 115 D~~~~~~~~~~~~----------~~~~~~~~~d~~~~~~l~~~~~v~------------~~P~~~lvd~~~~~G~v~~~~ 172 (438)
|. .+...++.+. .++......|.+ ..+++.|++. .+|+++|||+ +|+++...
T Consensus 74 D~-~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~--~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~---~G~I~~~~ 147 (224)
T 1prx_A 74 DS-VEDHLAWSKDINAYNSEEPTEKLPFPIIDDRN--RELAILLGMLDPAEKDEKGMPVTARVVFVFGP---DKKLKLSI 147 (224)
T ss_dssp SC-HHHHHHHHHHHHHHTTSCCCSCCSSCEEECTT--CHHHHHTTSSCSCTTCSSSCCTTCCEEEEECT---TSBEEEEE
T ss_pred CC-HHHHHHHHHHHHHhhCcccccCcCcceeecCc--hHHHHHhCCCCcccccCCCccccceEEEEECC---CCEEEEEE
Confidence 85 3444444442 332211122433 6788999884 4799999999 99998775
Q ss_pred c
Q 013684 173 G 173 (438)
Q Consensus 173 ~ 173 (438)
.
T Consensus 148 ~ 148 (224)
T 1prx_A 148 L 148 (224)
T ss_dssp E
T ss_pred e
Confidence 4
No 209
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.60 E-value=3.2e-15 Score=127.02 Aligned_cols=84 Identities=23% Similarity=0.385 Sum_probs=75.3
Q ss_pred CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCC
Q 013684 222 GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 301 (438)
Q Consensus 222 ~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 301 (438)
+.+|. ...++.++|++++|+||++||++|+.+.|.+.++++++++ ++.++.|++|.+
T Consensus 38 ~~~~~-~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~------------ 94 (141)
T 3hxs_A 38 DYENH-SKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG----------KIYIYKVNVDKE------------ 94 (141)
T ss_dssp CCSSC-CCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC------------
T ss_pred ccccc-hhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC----------ceEEEEEECCCC------------
Confidence 77788 8889999999999999999999999999999999998875 388999988865
Q ss_pred CcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 302 WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 302 ~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
..+++.|+|.++|+++++|++|+++..
T Consensus 95 -----------~~~~~~~~v~~~Pt~~~~~~~g~~~~~ 121 (141)
T 3hxs_A 95 -----------PELARDFGIQSIPTIWFVPMKGEPQVN 121 (141)
T ss_dssp -----------HHHHHHTTCCSSSEEEEECSSSCCEEE
T ss_pred -----------HHHHHHcCCCCcCEEEEEeCCCCEEEE
Confidence 578999999999999999999998743
No 210
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.60 E-value=8.2e-16 Score=140.43 Aligned_cols=116 Identities=6% Similarity=0.093 Sum_probs=96.2
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccC-Cccch-----hhHHHHHHHHHHHhcCCCCEEEEE
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANW-YPPCG-----NFTGVLVDVYEELRNNGSDFEVVF 111 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~w-C~~C~-----~~~p~l~~l~~~~~~~~~~~~iv~ 111 (438)
.+|.++|+|+ +.+.+|+.++|++++||+++|+||+.| ||+|. .+++.|.++ + .| ++|++
T Consensus 23 ~vG~~APdFt--------L~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~g--v~Vvg 87 (224)
T 3keb_A 23 RKGDYLPSFM--------LVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PH--LKLIV 87 (224)
T ss_dssp CTTCBCCCCE--------EEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TT--SEEEE
T ss_pred CCCCCCCCeE--------EECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CC--CEEEE
Confidence 4799999999 899999999999999999999999988 99999 888888877 3 33 99999
Q ss_pred EecCCCHHHHHHhHhcCCccccc-CCChHHHHHHhhhcCcCc---------cceEEEecCCCCCCCcccccc
Q 013684 112 VSSDEDLNAFNNYRACMPWLAVP-YSDLETKKALNRKFDIEG---------IPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 112 vs~D~~~~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~v~~---------~P~~~lvd~~~~~G~v~~~~~ 173 (438)
||.| +....++|.++++...++ .+|.. ...+++.||+.. .|++||||+ +|+|++...
T Consensus 88 IS~D-s~~~~~~f~~~~gl~~fplLsD~~-~~~vak~yGv~~~~~~~~G~~~p~tfvID~---dG~I~~~~~ 154 (224)
T 3keb_A 88 ITVD-SPSSLARARHEHGLPNIALLSTLR-GRDFHKRYGVLITEYPLSGYTSPAIILADA---ANVVHYSER 154 (224)
T ss_dssp EESS-CHHHHHHHHHHHCCTTCEEEESTT-CTTHHHHTTCBCCSTTSTTCBCCEEEEECT---TCBEEEEEE
T ss_pred EECC-CHHHHHHHHHHcCCCCceEEEcCC-chHHHHHhCCccccccccCCccCEEEEEcC---CCEEEEEEe
Confidence 9998 567788888877653222 33431 168899999864 799999999 999998765
No 211
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.59 E-value=5.6e-14 Score=130.98 Aligned_cols=70 Identities=21% Similarity=0.385 Sum_probs=61.0
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+++++|+|||+||++|+.+.|.+.++++++++.+.++.++.|+++.+.. ..+++.|+
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~----------------------~~l~~~~~ 86 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETN----------------------SAVCRDFN 86 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTT----------------------HHHHHHTT
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhh----------------------HHHHHHcC
Confidence 35999999999999999999999999999998743459999998864432 78999999
Q ss_pred cCccceEEEecC
Q 013684 150 IEGIPCLVVLQP 161 (438)
Q Consensus 150 v~~~P~~~lvd~ 161 (438)
|.++|++++++.
T Consensus 87 v~~~Pt~~~~~~ 98 (244)
T 3q6o_A 87 IPGFPTVRFFXA 98 (244)
T ss_dssp CCSSSEEEEECT
T ss_pred CCccCEEEEEeC
Confidence 999999999995
No 212
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.59 E-value=5.5e-16 Score=136.80 Aligned_cols=121 Identities=14% Similarity=0.209 Sum_probs=95.0
Q ss_pred HHHhhccchhHHHHHhhcccccCC----CC-----CEEecccc-CCC-EEEEEEeccCCccchhh-HHHHHHHHHHHhcC
Q 013684 36 RFLIMSLSQWYVQQLRRRMTSTKE----IG-----EEVKVSDL-EGK-VTALYFSANWYPPCGNF-TGVLVDVYEELRNN 103 (438)
Q Consensus 36 ~~~~g~~~p~f~~~~~~~~~~~~~----~g-----~~v~l~~~-~gk-~vll~F~a~wC~~C~~~-~p~l~~l~~~~~~~ 103 (438)
...+|.++|+|+ +.+. +| +.++++++ +|| +||++||++|||+|+.+ +|.|+++++++++.
T Consensus 6 g~~~g~~aP~f~--------l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~ 77 (171)
T 2pwj_A 6 GTDILSAASNVS--------LQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAK 77 (171)
T ss_dssp ----CCCSSSBC--------CCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHT
T ss_pred cccccCcCCCeE--------EecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHC
Confidence 345677999999 8887 57 89999996 996 77789999999999999 99999999999987
Q ss_pred CCCEE-EEEEecCCCHHHHHHhHhcCCc-cccc-CCChHHHHHHhhhcCcCc-----------cceEEEecCCCCCCCcc
Q 013684 104 GSDFE-VVFVSSDEDLNAFNNYRACMPW-LAVP-YSDLETKKALNRKFDIEG-----------IPCLVVLQPYDDKDDAT 169 (438)
Q Consensus 104 ~~~~~-iv~vs~D~~~~~~~~~~~~~~~-~~~~-~~d~~~~~~l~~~~~v~~-----------~P~~~lvd~~~~~G~v~ 169 (438)
| ++ |++||.| +.+..+++.+++++ ..+| +.|.+ ..+++.|++.. .|+.++|+ +|+|+
T Consensus 78 g--~~~vv~Is~d-~~~~~~~~~~~~~~~~~fp~l~D~~--~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~----~G~I~ 148 (171)
T 2pwj_A 78 G--VDSVICVAIN-DPYTVNAWAEKIQAKDAIEFYGDFD--GSFHKSLELTTDLSAGLLGIRSERWSAYVV----DGKVK 148 (171)
T ss_dssp T--CSEEEEEESS-CHHHHHHHHHHTTCTTTSEEEECTT--CHHHHHHTCEEECTTTTCCEEECCEEEEEE----TTEEE
T ss_pred C--CCEEEEEeCC-CHHHHHHHHHHhCCCCceEEEECCc--cHHHHHhCCccccccccCCcccceeEEEEE----CCEEE
Confidence 6 88 9999998 45678888887774 1233 23443 68889998853 56788887 89988
Q ss_pred cccc
Q 013684 170 LHDG 173 (438)
Q Consensus 170 ~~~~ 173 (438)
+...
T Consensus 149 ~~~~ 152 (171)
T 2pwj_A 149 ALNV 152 (171)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7654
No 213
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.59 E-value=7.3e-16 Score=141.61 Aligned_cols=119 Identities=12% Similarity=0.173 Sum_probs=93.1
Q ss_pred HhhccchhHHHHHhhcccccCC--CCCEEeccccCCC--EEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEe
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKE--IGEEVKVSDLEGK--VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVS 113 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~--~g~~v~l~~~~gk--~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs 113 (438)
.+|+.+|+|+ +.+. +| .+++++++|| +||++||++|||+|..+++.|++++++|+++| ++||+||
T Consensus 4 ~iG~~aP~F~--------l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~--v~vi~vS 72 (220)
T 1xcc_A 4 HLGATFPNFT--------AKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLN--CKLIGFS 72 (220)
T ss_dssp CTTCBCCCCE--------ECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTT--EEEEEEE
T ss_pred CCCCCCCCcE--------eecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcC--CEEEEEe
Confidence 5799999999 8898 99 8999999998 45555689999999999999999999999875 9999999
Q ss_pred cCCCHHHHHHhHh-------cCCcccccCCChHHHHHHhhhcCcC------------ccceEEEecCCCCCCCcccccc
Q 013684 114 SDEDLNAFNNYRA-------CMPWLAVPYSDLETKKALNRKFDIE------------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 114 ~D~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~l~~~~~v~------------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+|. .+..+++.+ +.++......|.+ ..+++.|++. .+|+++|||+ +|+++....
T Consensus 73 ~D~-~~~~~~~~~~i~~~~~~~~~~fpil~D~~--~~va~~ygv~~~~~~~~~g~~~~~p~~flID~---~G~I~~~~~ 145 (220)
T 1xcc_A 73 CNS-KESHDKWIEDIKYYGKLNKWEIPIVCDES--RELANKLKIMDEQEKDITGLPLTCRCLFFISP---EKKIKATVL 145 (220)
T ss_dssp SSC-HHHHHHHHHHHHHHHTCSCCCCCEEECTT--SHHHHHHTCEEEEEECTTSCEEECEEEEEECT---TSBEEEEEE
T ss_pred CCC-HHHHHHHHHHHHHHhcCCCCcceeEECch--hHHHHHhCCCCcccccCCCCCcccceEEEECC---CCEEEEEEe
Confidence 985 333444443 2332211122433 6788999983 4799999999 999987754
No 214
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.58 E-value=1.1e-14 Score=121.69 Aligned_cols=90 Identities=14% Similarity=0.380 Sum_probs=75.1
Q ss_pred CCCCCccCCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHH
Q 013684 215 HDRGYLLGHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFE 294 (438)
Q Consensus 215 ~~~~f~l~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~ 294 (438)
..|++. ..+++ .++....+||+++|+||++||++|+.+.|.+.+++++++++ +.++.|++|..
T Consensus 23 ~~~~~~-~~~~~-~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~----------v~~~~vd~d~~----- 85 (128)
T 3ul3_B 23 KVPRLQ-QNGSN-IINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKR----------IYLLKVDLDKN----- 85 (128)
T ss_dssp ---CCC-CCCCS-SSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG----------EEEEEEEGGGC-----
T ss_pred cCCccc-cCCcc-HHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC----------eEEEEEECCCC-----
Confidence 455555 55566 67777788999999999999999999999999999999754 88999988755
Q ss_pred HHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 295 SYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 295 ~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
..+++.|+|.++||++++ ++|+++.+.
T Consensus 86 ------------------~~l~~~~~v~~~Pt~~~~-~~G~~~~~~ 112 (128)
T 3ul3_B 86 ------------------ESLARKFSVKSLPTIILL-KNKTMLARK 112 (128)
T ss_dssp ------------------HHHHHHTTCCSSSEEEEE-ETTEEEEEE
T ss_pred ------------------HHHHHHcCCCCcCEEEEE-ECCEEEEEe
Confidence 578999999999999999 799988763
No 215
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.56 E-value=1.5e-15 Score=128.31 Aligned_cols=96 Identities=18% Similarity=0.326 Sum_probs=76.1
Q ss_pred hhhcCCCCCc-c-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHH---HHHHHHHHhhhhhcCCCCCCEEEEEEe
Q 013684 211 LLTNHDRGYL-L-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVS 285 (438)
Q Consensus 211 ~~g~~~~~f~-l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~vv~is 285 (438)
..+..+|+|. + +.++. ...+++.+||+++|+||++||++|+.+.|.+ .++.+.++ ++.++.|+
T Consensus 5 ~~~~~~~~f~~~~~~~~~-~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-----------~~~~~~vd 72 (134)
T 2fwh_A 5 AQTQTHLNFTQIKTVDEL-NQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-----------DTVLLQAN 72 (134)
T ss_dssp -----CCCCEECCSHHHH-HHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-----------TSEEEEEE
T ss_pred cccccCCCcEEecCHHHH-HHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-----------CcEEEEEe
Confidence 3466788887 4 55565 6667778899999999999999999999988 77877764 47899998
Q ss_pred cCCCHHHHHHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEE
Q 013684 286 TDRDQTSFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTV 337 (438)
Q Consensus 286 ~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~ 337 (438)
++... +....+++.|+|.++|+++++|++|+++
T Consensus 73 ~~~~~-------------------~~~~~l~~~~~v~~~Pt~~~~d~~G~~v 105 (134)
T 2fwh_A 73 VTAND-------------------AQDVALLKHLNVLGLPTILFFDGQGQEH 105 (134)
T ss_dssp CTTCC-------------------HHHHHHHHHTTCCSSSEEEEECTTSCBC
T ss_pred CCCCc-------------------chHHHHHHHcCCCCCCEEEEECCCCCEe
Confidence 87532 2357899999999999999999999997
No 216
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.56 E-value=4.8e-15 Score=130.27 Aligned_cols=117 Identities=15% Similarity=0.189 Sum_probs=98.4
Q ss_pred hhhcCCCCCcc-CCCC----------Cceeecccc-CCCEE-EEEEecCCChhhhh-hhHHHHHHHHHHHhhhhhcCCCC
Q 013684 211 LLTNHDRGYLL-GHPP----------DEKVPVSSL-VGKTV-GLYFSARWCIPCEK-FMPKLLSIYQKIKQNLVEKGDAL 276 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g----------~~~~~l~~~-~gk~v-ll~F~a~wC~~C~~-~~p~l~~l~~~~~~~~~~~~~~~ 276 (438)
.+|+..|+.++ ...+ + .++++++ +||++ |++||+.|||.|.. ++|.+.+.+++|+++
T Consensus 11 ~~~~~~p~~~~~~~~~~~~~~~~~~~~-~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~-------- 81 (176)
T 4f82_A 11 QVGDALPDAQLFEFIDDAREGCTLGPN-ACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAA-------- 81 (176)
T ss_dssp CTTCBCCCCEEEEEECSCCTTCCSEEE-EEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT--------
T ss_pred hcCCcCCceEEEEecccccccccCCce-EEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhC--------
Confidence 36889999877 2222 4 8999997 99865 55666999999999 999999999999976
Q ss_pred CCE-EEEEEecCCCHHHHHHHHhcCCCcc--cccCCchhHHHHHhcCcC------c-----eeeEEEECCCCcEEEcc
Q 013684 277 EDF-EVVFVSTDRDQTSFESYFGTMPWLA--LPFGDPTIKELTKYFDVQ------G-----IPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 277 ~~~-~vv~is~d~~~~~~~~~~~~~~~~~--~p~~~d~~~~l~~~~~v~------~-----~P~~~lid~~G~i~~~~ 340 (438)
++ +|++||+| +....++|.++.+ +. ||++.|.+.++++.||+. + .|++||| ++|+|++..
T Consensus 82 -g~d~VigIS~D-~~~~~~~f~~~~~-l~~~f~lLsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~I~~~~ 155 (176)
T 4f82_A 82 -GIDEIWCVSVN-DAFVMGAWGRDLH-TAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGVVKTLA 155 (176)
T ss_dssp -TCCEEEEEESS-CHHHHHHHHHHTT-CTTTSEEEECTTCHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTEEEEEE
T ss_pred -CCCEEEEEeCC-CHHHHHHHHHHhC-CCCCceEEEcCchHHHHHhCCCccccccCCCcccccEEEEE-cCCEEEEEE
Confidence 89 99999999 5778889998887 55 999999999999999983 2 4889999 999999875
No 217
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.56 E-value=1.6e-15 Score=141.34 Aligned_cols=118 Identities=15% Similarity=0.230 Sum_probs=93.7
Q ss_pred HhhccchhHHHHHhhcccccCCCCCEEec-ccc--CCCEE-EEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEe
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIGEEVKV-SDL--EGKVT-ALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVS 113 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g~~v~l-~~~--~gk~v-ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs 113 (438)
.+|+.+|+|+ +.+.+| .+++ +++ +||++ |++||++||++|..+++.|++++++|+++| ++||+||
T Consensus 6 ~iG~~aPdF~--------l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~g--v~VI~VS 74 (249)
T 3a2v_A 6 LIGERFPEME--------VTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLG--VDLIGLS 74 (249)
T ss_dssp CTTSBCCCEE--------EEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTT--EEEEEEE
T ss_pred CCCCCCCCeE--------EEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCC--cEEEEEE
Confidence 4799999999 889999 7999 999 99964 567899999999999999999999999876 9999999
Q ss_pred cCCCH--HHHHHhHh-----cCCcccccCCChHHHHHHhhhcCcC-------ccceEEEecCCCCCCCcccccc
Q 013684 114 SDEDL--NAFNNYRA-----CMPWLAVPYSDLETKKALNRKFDIE-------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 114 ~D~~~--~~~~~~~~-----~~~~~~~~~~d~~~~~~l~~~~~v~-------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
+|... .+|.+... .++|+. ..|.+ ..+++.|++. .+|+++|||+ +|+++....
T Consensus 75 ~Ds~~~~~~w~~~~~~~~~~~i~fPi--l~D~~--~~ia~~ygv~~~~~g~~~~p~~fIID~---dG~I~~~~~ 141 (249)
T 3a2v_A 75 VDSVFSHIKWKEWIERHIGVRIPFPI--IADPQ--GTVARRLGLLHAESATHTVRGVFIVDA---RGVIRTMLY 141 (249)
T ss_dssp SSCHHHHHHHHHHHHHHTCCCCCSCE--EECTT--SHHHHHHTCCCTTCSSSCCEEEEEECT---TSBEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCceeE--EECCc--hHHHHHhCCccccCCCcccceEEEECC---CCeEEEEEe
Confidence 98532 22333222 223322 22433 6889999997 8999999999 999987654
No 218
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.56 E-value=3.9e-15 Score=135.00 Aligned_cols=121 Identities=16% Similarity=0.245 Sum_probs=96.2
Q ss_pred HHHhhccchhHHHHHhhccccc---CCCCCEEeccccCCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEE
Q 013684 36 RFLIMSLSQWYVQQLRRRMTST---KEIGEEVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVF 111 (438)
Q Consensus 36 ~~~~g~~~p~f~~~~~~~~~~~---~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~ 111 (438)
.+.||.++|+|+ ++ +.++++++|++++||+++|+|| +.|||.|..+++.|++.+++|++.| ++|++
T Consensus 22 ~~~VG~~APdF~--------l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g--~~vig 91 (216)
T 3sbc_A 22 VAQVQKQAPTFK--------KTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQG--AQVLF 91 (216)
T ss_dssp CCCTTSBCCCCC--------EEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTT--EEEEE
T ss_pred hhhcCCcCCCCC--------CcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCC--ceEEE
Confidence 356899999999 54 6777899999999999999999 9999999999999999999999986 99999
Q ss_pred EecCCCHHHHHHhHhcC----Cc--cccc-CCChHHHHHHhhhcCcC------ccceEEEecCCCCCCCccccc
Q 013684 112 VSSDEDLNAFNNYRACM----PW--LAVP-YSDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 112 vs~D~~~~~~~~~~~~~----~~--~~~~-~~d~~~~~~l~~~~~v~------~~P~~~lvd~~~~~G~v~~~~ 172 (438)
||.|. ......+.+.. +. ..+| ..|.+ .++++.||+. ..+.+||||+ +|.|.+..
T Consensus 92 iS~Ds-~~sh~aw~~~~~~~~~~~~l~fpllsD~~--~~vak~YGv~~~~~g~~~R~tFiID~---~G~Ir~~~ 159 (216)
T 3sbc_A 92 ASTDS-EYSLLAWTNIPRKEGGLGPINIPLLADTN--HSLSRDYGVLIEEEGVALRGLFIIDP---KGVIRHIT 159 (216)
T ss_dssp EESSC-HHHHHHHHTSCGGGTCCCSCSSCEEECTT--SHHHHHHTCEETTTTEECEEEEEECT---TSBEEEEE
T ss_pred eecCc-hhhHHHHHHHHHHhCCccCcccceEeCCC--CHHHHHcCCeeccCCceeeEEEEECC---CCeEEEEE
Confidence 99994 34444444322 11 1222 22443 7999999983 5689999999 99987654
No 219
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.55 E-value=3.3e-15 Score=138.58 Aligned_cols=140 Identities=21% Similarity=0.297 Sum_probs=95.1
Q ss_pred CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCC
Q 013684 222 GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 301 (438)
Q Consensus 222 ~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 301 (438)
..+++ .+.....+|++++|+|||+||++|+.+.|.|.++++++++. +.++.++.|+++.+
T Consensus 19 ~l~~~-~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~-------~~~~~~~~vd~~~~------------ 78 (241)
T 3idv_A 19 VLNDA-NFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDK-------DPPIPVAKIDATSA------------ 78 (241)
T ss_dssp EECTT-THHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTS-------SSCCCEEEEETTTC------------
T ss_pred Eeccc-CHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhc-------CCceEEEEEeccCC------------
Confidence 44555 45444457899999999999999999999999999999865 34588888888755
Q ss_pred CcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcccchhhhhccccCCCCCHHHHHHHHHHHHHHhccC----CCc
Q 013684 302 WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL----PRS 377 (438)
Q Consensus 302 ~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~i~~~~~~~----~~~ 377 (438)
..+++.|+|.++||++++ ++|+.+...| ..+. ++|.+.+++..... +..
T Consensus 79 -----------~~l~~~~~v~~~Pt~~~~-~~g~~~~~~g------------~~~~---~~l~~~i~~~~~~~~~~~~~~ 131 (241)
T 3idv_A 79 -----------SVLASRFDVSGYPTIKIL-KKGQAVDYEG------------SRTQ---EEIVAKVREVSQPDWTPPPEV 131 (241)
T ss_dssp -----------HHHHHHTTCCSSSEEEEE-ETTEEEECCS------------CSCH---HHHHHHHHHHHSTTCCCCCCS
T ss_pred -----------HHHHHhcCCCcCCEEEEE-cCCCcccccC------------cccH---HHHHHHHhhccCccccccccc
Confidence 678999999999999999 5677664332 1222 44555555554432 111
Q ss_pred ccccc--------cccccccccccCCCCCcccCccCCCCCcee
Q 013684 378 EFHIG--------HRHELNLVSEGTGGGPFICCDCDEQGSGWA 412 (438)
Q Consensus 378 ~~~~~--------~~~~~~~~~~~~~~~~~~c~~C~~~~~~w~ 412 (438)
..... ..+... +..+.++||++|+.+.+.|.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~----~v~f~a~wC~~C~~~~p~~~ 170 (241)
T 3idv_A 132 TLVLTKENFDEVVNDADII----LVEFYAPWCGHCKKLAPEYE 170 (241)
T ss_dssp SEECCTTTHHHHHHHCSEE----EEEEECTTCTGGGGTHHHHH
T ss_pred ceeccHHHHHHhhccCCeE----EEEEECCCCHHHHHhHHHHH
Confidence 11111 112222 24566899999998766553
No 220
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.54 E-value=5.6e-15 Score=127.90 Aligned_cols=93 Identities=24% Similarity=0.410 Sum_probs=73.1
Q ss_pred CCCceeeccccCCCEEEEEEe-cCCChhhhhhhHHH---HHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhc
Q 013684 224 PPDEKVPVSSLVGKTVGLYFS-ARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGT 299 (438)
Q Consensus 224 ~g~~~~~l~~~~gk~vll~F~-a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~ 299 (438)
.++ .+.++..+||+++|+|| ++||++|+.+.|.+ .++.+.+.. ++.++.|+++....
T Consensus 36 ~~~-~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~----------~~~~v~vd~~~~~~-------- 96 (154)
T 2ju5_A 36 YAE-ALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV----------HLHMVEVDFPQKNH-------- 96 (154)
T ss_dssp HHH-HHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH----------HCEEEEEECCSSCC--------
T ss_pred HHH-HHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC----------cEEEEEecCccccC--------
Confidence 344 66777788999999999 99999999999999 677655543 47888888775420
Q ss_pred CCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 300 MPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 300 ~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+.+++ .+....+++.|+|.++||++|+|++|+++.+
T Consensus 97 ---~~~~~-~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~ 132 (154)
T 2ju5_A 97 ---QPEEQ-RQKNQELKAQYKVTGFPELVFIDAEGKQLAR 132 (154)
T ss_dssp ---CCHHH-HHHHHHHHHHTTCCSSSEEEEECTTCCEEEE
T ss_pred ---CChhh-HhhHHHHHHHcCCCCCCEEEEEcCCCCEEEE
Confidence 22222 3456789999999999999999999999987
No 221
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.53 E-value=3.1e-14 Score=122.11 Aligned_cols=114 Identities=17% Similarity=0.276 Sum_probs=86.5
Q ss_pred hcCCCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHH
Q 013684 213 TNHDRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQT 291 (438)
Q Consensus 213 g~~~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~ 291 (438)
+...++..+ +.++. .+......+++++|+||++||++|+.+.|.|.++++++++ ++.++.|++|.+
T Consensus 32 ~~~~~~~~v~~l~~~-~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~----------~~~~~~vd~~~~-- 98 (148)
T 3p2a_A 32 GHSLFDGEVINATAE-TLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG----------KVRFVKVNTEAE-- 98 (148)
T ss_dssp CCBTTCCCCEECCTT-THHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC--
T ss_pred CCccccCCceecCHH-HHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC----------ceEEEEEECcCC--
Confidence 334455566 77777 6654446789999999999999999999999999998864 488999988765
Q ss_pred HHHHHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcccchhhhhccccCCCCCHHHHHHHHHHHHHHh
Q 013684 292 SFESYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEA 371 (438)
Q Consensus 292 ~~~~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~i~~~~ 371 (438)
..+++.|+|.++||++++ ++|+++.+. .|. .+ .++|.+.|++.+
T Consensus 99 ---------------------~~l~~~~~v~~~Pt~~~~-~~G~~~~~~-------~G~----~~---~~~l~~~l~~~l 142 (148)
T 3p2a_A 99 ---------------------PALSTRFRIRSIPTIMLY-RNGKMIDML-------NGA----VP---KAPFDNWLDEQL 142 (148)
T ss_dssp ---------------------HHHHHHTTCCSSSEEEEE-ETTEEEEEE-------SSC----CC---HHHHHHHHHHHH
T ss_pred ---------------------HHHHHHCCCCccCEEEEE-ECCeEEEEE-------eCC----CC---HHHHHHHHHHHh
Confidence 578999999999999999 799988763 232 22 355666666666
Q ss_pred ccCC
Q 013684 372 KNLP 375 (438)
Q Consensus 372 ~~~~ 375 (438)
...|
T Consensus 143 ~~~~ 146 (148)
T 3p2a_A 143 SRDP 146 (148)
T ss_dssp HSCC
T ss_pred cccC
Confidence 5544
No 222
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.53 E-value=1.2e-13 Score=142.08 Aligned_cols=190 Identities=14% Similarity=0.191 Sum_probs=114.6
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+++++|+|||+||++|+.+.|.|.++++++++.+.++.++.|++|.+.. .++++.|+
T Consensus 29 ~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~----------------------~~l~~~~~ 86 (519)
T 3t58_A 29 SSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETN----------------------SAVCREFN 86 (519)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGG----------------------HHHHHHTT
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcccc----------------------HHHHHHcC
Confidence 35899999999999999999999999999998743458999998875432 78999999
Q ss_pred cCccceEEEecCCCCCCCcccccchhHHhhhCCCCccCChhHHHH-HHHHHHhhhhHHHHHhhhhcCCCCCccCCCCCce
Q 013684 150 IEGIPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEE-LQKEEKEKHERQTLINLLTNHDRGYLLGHPPDEK 228 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~~~~~~i~~~~~~a~p~~~e~l~~-L~~~~~~~~~~~~~~~~~g~~~~~f~l~~~g~~~ 228 (438)
|.++|+++++++...+|+.+.... +. ...+.+.. +......... ......|.+.. .+.. .
T Consensus 87 V~~~PTl~~f~~g~~~G~~~~~~~-------g~----~~~~~L~~~l~~~l~~~~~------~~P~~~p~l~~-it~~-~ 147 (519)
T 3t58_A 87 IAGFPTVRFFQAFTKNGSGATLPG-------AG----ANVQTLRMRLIDALESHRD------TWPPACPPLEP-AKLN-D 147 (519)
T ss_dssp CCSBSEEEEECTTCCSCCCEEECC-------SS----CCHHHHHHHHHHHHTTCCS------CCCTTCCCCSB-CCHH-H
T ss_pred CcccCEEEEEcCcccCCCceeEec-------CC----CCHHHHHHHHHHHHhhccc------cCCCCCCccCc-CCHH-H
Confidence 999999999995333444332211 11 11222222 2221111100 00001111211 1111 1
Q ss_pred ee--ccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccc
Q 013684 229 VP--VSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALP 306 (438)
Q Consensus 229 ~~--l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p 306 (438)
+. ++.-..++++|.|.... .+...++...+... .++.|..+ .+.+
T Consensus 148 l~~~l~~~~~~~vallF~~~~-------s~~~~~~~ldl~~~--------~~v~v~~v-~~~~----------------- 194 (519)
T 3t58_A 148 IDGFFTRNKADYLALVFERED-------SYLGREVTLDLSQY--------HAVAVRRV-LNTE----------------- 194 (519)
T ss_dssp HTTGGGSCCCSEEEEEEECTT-------CCHHHHHHHHTTTC--------TTEEEEEE-ETTC-----------------
T ss_pred HHHHhccCCCCeEEEEecCCc-------hHHHHHHHHHhhcc--------CCeeEEEe-cCch-----------------
Confidence 10 12223568888887543 22334444444432 34554333 2323
Q ss_pred cCCchhHHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 307 FGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 307 ~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
..+.++|||+.+|++++++++|++...
T Consensus 195 ------~~l~~kfgV~~~Pslvl~~~nGk~~~~ 221 (519)
T 3t58_A 195 ------SDLVNKFGVTDFPSCYLLLRNGSVSRV 221 (519)
T ss_dssp ------HHHHHHHTCCCSSEEEEEETTSCEEEC
T ss_pred ------HHHHHHcCCCCCCeEEEEeCCCceeec
Confidence 678999999999999999999987543
No 223
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.53 E-value=4.9e-14 Score=118.42 Aligned_cols=78 Identities=27% Similarity=0.436 Sum_probs=66.9
Q ss_pred cCCCEEEEEEecCCChhhhhhhHHHH--HHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCch
Q 013684 234 LVGKTVGLYFSARWCIPCEKFMPKLL--SIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPT 311 (438)
Q Consensus 234 ~~gk~vll~F~a~wC~~C~~~~p~l~--~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~ 311 (438)
..||+++|+||++||++|+.+.|.|. ++.+.++++ +.++.|+++.. +.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~----------~~~~~vd~~~~--------------------~~ 76 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKH----------FEVVKIDVGNF--------------------DR 76 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHH----------CEEEEEECTTT--------------------TS
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCC----------EEEEEEeCCcc--------------------cc
Confidence 45889999999999999999999999 999988754 88999988421 11
Q ss_pred hHHHHHhcCc---CceeeEEEECCCCcEEEccc
Q 013684 312 IKELTKYFDV---QGIPCLVIIGPEGKTVTKQG 341 (438)
Q Consensus 312 ~~~l~~~~~v---~~~P~~~lid~~G~i~~~~~ 341 (438)
..++++.|+| .++||++++|++|+++.+..
T Consensus 77 ~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~ 109 (133)
T 3fk8_A 77 NLELSQAYGDPIQDGIPAVVVVNSDGKVRYTTK 109 (133)
T ss_dssp SHHHHHHTTCGGGGCSSEEEEECTTSCEEEECC
T ss_pred hHHHHHHhCCccCCccceEEEECCCCCEEEEec
Confidence 3779999999 99999999999999998754
No 224
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.51 E-value=3.5e-14 Score=121.03 Aligned_cols=69 Identities=13% Similarity=0.204 Sum_probs=62.0
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++|+|.|||+||+||+.+.|.|.+++++++++ +.|+.|++|.. .+
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~----------v~f~kVDVDe~-----------------------~e 86 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF----------CVIYLVDITEV-----------------------PD 86 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT----------EEEEEEETTTC-----------------------CT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC----------cEEEEEECCCC-----------------------HH
Confidence 4589999999999999999999999999999754 78888888865 67
Q ss_pred HHHhcCcCceeeEEEECCCCcEE
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTV 337 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~ 337 (438)
++.+|+|.++||++++ ++|+.+
T Consensus 87 ~a~~y~V~siPT~~fF-k~G~~v 108 (160)
T 2av4_A 87 FNTMYELYDPVSVMFF-YRNKHM 108 (160)
T ss_dssp TTTTTTCCSSEEEEEE-ETTEEE
T ss_pred HHHHcCCCCCCEEEEE-ECCEEE
Confidence 8999999999999999 788887
No 225
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.50 E-value=2.6e-14 Score=115.98 Aligned_cols=71 Identities=24% Similarity=0.455 Sum_probs=62.7
Q ss_pred cCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhH
Q 013684 234 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 313 (438)
Q Consensus 234 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 313 (438)
.+||+++|+||++||++|+.+.|.+.+++++++ ++.++.|++|.. .
T Consensus 22 ~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~-----------~~~~~~vd~~~~-----------------------~ 67 (109)
T 3f3q_A 22 AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-----------QADFYKLDVDEL-----------------------G 67 (109)
T ss_dssp TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------H
T ss_pred hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-----------CCEEEEEECCCC-----------------------H
Confidence 458999999999999999999999999988875 468888888755 6
Q ss_pred HHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 314 ELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 314 ~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.+++.|+|.++||+++++ +|+++.+
T Consensus 68 ~l~~~~~v~~~Pt~~~~~-~G~~~~~ 92 (109)
T 3f3q_A 68 DVAQKNEVSAMPTLLLFK-NGKEVAK 92 (109)
T ss_dssp HHHHHTTCCSSSEEEEEE-TTEEEEE
T ss_pred HHHHHcCCCccCEEEEEE-CCEEEEE
Confidence 789999999999999996 9998876
No 226
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.49 E-value=2.9e-14 Score=129.53 Aligned_cols=124 Identities=15% Similarity=0.146 Sum_probs=96.0
Q ss_pred HHhhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC
Q 013684 37 FLIMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD 115 (438)
Q Consensus 37 ~~~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D 115 (438)
+.||++||+|+ +..+ +.+.+|++++|++++||+|||+|| +.|||.|..++..|++.+++|++.| ++|++||.|
T Consensus 26 ~~vG~~APdF~---~~a~-l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g--~~vigiS~D 99 (219)
T 3tue_A 26 AKINSPAPSFE---EVAL-MPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELN--CEVLACSID 99 (219)
T ss_dssp CCTTSBCCCCE---EEEE-CTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTT--EEEEEEESS
T ss_pred cccCCcCCCCc---cccc-ccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCC--cEEEEeeCC
Confidence 46899999998 1111 347889999999999999999999 9999999999999999999999976 999999999
Q ss_pred CCHHHHHHhHhcC----CcccccC---CChHHHHHHhhhcCcC------ccceEEEecCCCCCCCccccc
Q 013684 116 EDLNAFNNYRACM----PWLAVPY---SDLETKKALNRKFDIE------GIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 116 ~~~~~~~~~~~~~----~~~~~~~---~d~~~~~~l~~~~~v~------~~P~~~lvd~~~~~G~v~~~~ 172 (438)
. .....++..+. ....++| .|.+ .++++.||+- ....+||||+ +|+|....
T Consensus 100 s-~~sh~~w~~~~~~~~~~~~l~fpllsD~~--~~va~~yGv~~~~~g~~~R~tFiIDp---~g~Ir~~~ 163 (219)
T 3tue_A 100 S-EYAHLQWTLQDRKKGGLGTMAIPILADKT--KNIARSYGVLEESQGVAYRGLFIIDP---HGMLRQIT 163 (219)
T ss_dssp C-HHHHHHHHHSCGGGTCCCSCSSCEEECTT--SHHHHHTTCEETTTTEECEEEEEECT---TSBEEEEE
T ss_pred c-hhhHHHHhhhhHHhcCccccccccccCcc--cHHHHHcCCcccCCCeeEEEEEEECC---CCeEEEEE
Confidence 4 34444444321 2222222 2444 7899999983 3468999999 99887653
No 227
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.49 E-value=4.1e-14 Score=124.10 Aligned_cols=118 Identities=14% Similarity=0.254 Sum_probs=99.7
Q ss_pred hhhcCCCCCcc-CCCC-Cceeeccc-cCCCEEEEEEe-cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEE-EEEEe
Q 013684 211 LLTNHDRGYLL-GHPP-DEKVPVSS-LVGKTVGLYFS-ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFE-VVFVS 285 (438)
Q Consensus 211 ~~g~~~~~f~l-~~~g-~~~~~l~~-~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~-vv~is 285 (438)
.+|..+|+|++ +.++ + .+++++ ++||+++|+|| ..|||.|..+++.+.+.+++|++. +++ |++||
T Consensus 15 ~vGd~aPdf~l~~~g~~~-~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~---------gv~~VigIS 84 (171)
T 2xhf_A 15 KVGDIIPDVLVYEDVPSK-SFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEE---------GYHTIACIA 84 (171)
T ss_dssp CTTCBCCCCEEECSSTTC-EEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHT---------TCCEEEEEE
T ss_pred cCcCCCCCeEEecCCCCc-EEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC---------CCCEEEEEe
Confidence 47899999999 5442 7 999999 59999999998 579999999999999999999976 785 99999
Q ss_pred cCCCHHHHHHHHhcCCC-cccccCCchhHHHHHhcCcC-----------ceeeEEEECCCCcEEEcc
Q 013684 286 TDRDQTSFESYFGTMPW-LALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 286 ~d~~~~~~~~~~~~~~~-~~~p~~~d~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~~~ 340 (438)
+| +....++|.++.+. ..||++.|.+.++++.||+. ....+|||| +|+|++..
T Consensus 85 ~D-~~~~~~~w~~~~~~~~~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG~V~~~~ 149 (171)
T 2xhf_A 85 VN-DPFVMAAWGKTVDPEHKIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLID-DNKIRSVS 149 (171)
T ss_dssp SS-CHHHHHHHHHHHCTTCCSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TTEEEEEE
T ss_pred CC-CHHHHHHHHHhcCCCCCeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEEe-CCEEEEEE
Confidence 99 66777777776662 27999999999999999983 245789998 99999875
No 228
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.49 E-value=1.6e-13 Score=115.89 Aligned_cols=71 Identities=28% Similarity=0.513 Sum_probs=63.3
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+|+++|+||++||++|+.+.|.|.++++++++ ++.++.|++|.+ .+
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~----------~v~~~~vd~~~~-----------------------~~ 83 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDG----------QIVIYKVDTEKE-----------------------QE 83 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC-----------------------HH
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC----------CEEEEEEeCCCC-----------------------HH
Confidence 468999999999999999999999999988864 388999988765 57
Q ss_pred HHHhcCcCceeeEEEECCCCcEEE
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVT 338 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~ 338 (438)
+++.|+|.++||++++|++|+++.
T Consensus 84 l~~~~~v~~~Pt~~~~~~~G~~~~ 107 (136)
T 2l5l_A 84 LAGAFGIRSIPSILFIPMEGKPEM 107 (136)
T ss_dssp HHHHTTCCSSCEEEEECSSSCCEE
T ss_pred HHHHcCCCCCCEEEEECCCCcEEE
Confidence 889999999999999999999874
No 229
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.48 E-value=4.9e-14 Score=115.74 Aligned_cols=72 Identities=24% Similarity=0.406 Sum_probs=63.1
Q ss_pred ccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchh
Q 013684 233 SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 312 (438)
Q Consensus 233 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~ 312 (438)
+.++|+++|+||++||++|+.+.|.|.+++++++ ++.++.|++|..
T Consensus 28 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-----------~v~~~~vd~d~~----------------------- 73 (116)
T 3qfa_C 28 AAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS-----------NVIFLEVDVDDC----------------------- 73 (116)
T ss_dssp HHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCT-----------TSEEEEEETTTT-----------------------
T ss_pred hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----------CCEEEEEECCCC-----------------------
Confidence 3478999999999999999999999999887764 478888888754
Q ss_pred HHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 313 KELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 313 ~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.++++.|+|.++||++++ ++|+++.+
T Consensus 74 ~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 99 (116)
T 3qfa_C 74 QDVASECEVKSMPTFQFF-KKGQKVGE 99 (116)
T ss_dssp HHHHHHTTCCSSSEEEEE-SSSSEEEE
T ss_pred HHHHHHcCCccccEEEEE-eCCeEEEE
Confidence 678999999999999999 89998876
No 230
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.48 E-value=5.5e-14 Score=119.05 Aligned_cols=93 Identities=22% Similarity=0.443 Sum_probs=74.9
Q ss_pred cCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhH
Q 013684 234 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 313 (438)
Q Consensus 234 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 313 (438)
.+||+++|+||++||++|+.+.|.+.+++++++ ++.++.|++|.. .
T Consensus 44 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-----------~v~~~~v~~~~~-----------------------~ 89 (139)
T 3d22_A 44 RDGKIVLANFSARWCGPSRQIAPYYIELSENYP-----------SLMFLVIDVDEL-----------------------S 89 (139)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTS-----------------------H
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----------CCEEEEEeCccc-----------------------H
Confidence 468999999999999999999999999988774 478999998754 6
Q ss_pred HHHHhcCcCceeeEEEECCCCcEEEcccchhhhhccccCCCCCHHHHHHHHHHHHHHhccCCC
Q 013684 314 ELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNLPR 376 (438)
Q Consensus 314 ~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~i~~~~~~~~~ 376 (438)
++++.|+|.++||++++ ++|+++.+. .|. +. ++|.+.|++++...|.
T Consensus 90 ~~~~~~~v~~~Pt~~~~-~~G~~~~~~-------~G~-----~~---~~l~~~l~~~~~~~~~ 136 (139)
T 3d22_A 90 DFSASWEIKATPTFFFL-RDGQQVDKL-------VGA-----NK---PELHKKITAILDSLPP 136 (139)
T ss_dssp HHHHHTTCCEESEEEEE-ETTEEEEEE-------ESC-----CH---HHHHHHHHHHHHTSCT
T ss_pred HHHHHcCCCcccEEEEE-cCCeEEEEE-------eCC-----CH---HHHHHHHHHHhccCCC
Confidence 78999999999999999 999998763 332 22 5566667776665544
No 231
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.47 E-value=1.8e-13 Score=111.41 Aligned_cols=71 Identities=25% Similarity=0.484 Sum_probs=64.2
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.|++++|+||++||++|+.+.|.+.++++++++ ++.++.|++|.+ .+
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~----------~v~~~~vd~~~~-----------------------~~ 62 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD----------KLKIVKIDVDEN-----------------------QE 62 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT----------TCEEEEEETTTC-----------------------CS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC----------CcEEEEEECCCC-----------------------HH
Confidence 789999999999999999999999999998864 488999998865 56
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++|+++++ ++|+++.+
T Consensus 63 l~~~~~v~~~Pt~~~~-~~G~~~~~ 86 (112)
T 2voc_A 63 TAGKYGVMSIPTLLVL-KDGEVVET 86 (112)
T ss_dssp HHHHTTCCSBSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCcccEEEEE-eCCEEEEE
Confidence 8899999999999999 99999876
No 232
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.47 E-value=4e-14 Score=124.61 Aligned_cols=103 Identities=18% Similarity=0.232 Sum_probs=67.2
Q ss_pred eeeccccCCCEEEEEEecCCChhhhhhhHHH---HHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHH--HHhcCCC
Q 013684 228 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFES--YFGTMPW 302 (438)
Q Consensus 228 ~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~--~~~~~~~ 302 (438)
.+..+..+||+|+|+|||+||++|+.+.+.+ .++.+.++++ +.++.|++|...+.... +.....+
T Consensus 39 ~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~----------~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 39 GMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINND----------YVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp HHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHH----------CEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred HHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCC----------EEEEEEecCcccccchhhhhhhcchh
Confidence 4555567899999999999999999975444 5555555543 88999998865310000 0000011
Q ss_pred cccccCCchhHHH-HHhcCcCceeeEEEECCCCcEEEcc
Q 013684 303 LALPFGDPTIKEL-TKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 303 ~~~p~~~d~~~~l-~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
..+....+....+ .+.|+|.++||++|+|++|+++.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~ 147 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKS 147 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCC
T ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeec
Confidence 1111222222333 6899999999999999999998773
No 233
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.47 E-value=1.2e-12 Score=134.18 Aligned_cols=197 Identities=16% Similarity=0.267 Sum_probs=120.8
Q ss_pred hHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcC----ccceEEEecCCCC
Q 013684 89 FTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIE----GIPCLVVLQPYDD 164 (438)
Q Consensus 89 ~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~----~~P~~~lvd~~~~ 164 (438)
....+.++++++++++.++.++.++.+.- ..+.+.||+. ..|.+++++.
T Consensus 255 ~~~~~~~vA~~~~~k~~~i~F~~~D~~~~------------------------~~~l~~~gl~~~~~~~P~~~i~~~--- 307 (481)
T 3f8u_A 255 WRNRVMMVAKKFLDAGHKLNFAVASRKTF------------------------SHELSDFGLESTAGEIPVVAIRTA--- 307 (481)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEETTTT------------------------HHHHGGGTCCCCTTCSCEEEEECS---
T ss_pred HHHHHHHHHHHhcCCCceEEEEEEcHHHH------------------------HHHHHHcCCCcccCCCcEEEEEcC---
Confidence 35667888888887654466665543321 4556778886 6899999886
Q ss_pred CCCcccccchhHHhhhCCCCccCChh--HHHHHHHHHHhhhhHHHHHhhhhcCCCC---Ccc-CCCCCceeecccc-CCC
Q 013684 165 KDDATLHDGVELIYKYGIRAFPFTKE--KLEELQKEEKEKHERQTLINLLTNHDRG---YLL-GHPPDEKVPVSSL-VGK 237 (438)
Q Consensus 165 ~G~v~~~~~~~~i~~~~~~a~p~~~e--~l~~L~~~~~~~~~~~~~~~~~g~~~~~---f~l-~~~g~~~~~l~~~-~gk 237 (438)
++...... . .++.+ .+..+............+ ...+.|. -.+ ..+|+ .+..... .||
T Consensus 308 ~~~ky~~~----------~--~~t~e~~~l~~f~~~~~~g~~~~~~---~s~~~p~~~~~~v~~~~~~-~~~~~~~~~~k 371 (481)
T 3f8u_A 308 KGEKFVMQ----------E--EFSRDGKALERFLQDYFDGNLKRYL---KSEPIPESNDGPVKVVVAE-NFDEIVNNENK 371 (481)
T ss_dssp SSCEEECC----------S--CCCTTSHHHHHHHHHHHHTCCCCCC---CCCCCCSCCCSSSEEECTT-THHHHHTCTTC
T ss_pred CCcccCCC----------c--ccCccHHHHHHHHHHHhcCCccccc---ccCCCCCCCCCCeEEeccc-CHHHHhhcCCC
Confidence 55332111 0 12333 555544433322111111 1112221 122 44555 4432222 489
Q ss_pred EEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHHHH
Q 013684 238 TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTK 317 (438)
Q Consensus 238 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~ 317 (438)
+|+|+|||+||++|+.+.|.+.++++.+++. .++.++.|+++.+ ++.+
T Consensus 372 ~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~--------~~v~~~~id~~~~------------------------~~~~ 419 (481)
T 3f8u_A 372 DVLIEFYAPWCGHCKNLEPKYKELGEKLSKD--------PNIVIAKMDATAN------------------------DVPS 419 (481)
T ss_dssp EEEEEEECTTBHHHHHHHHHHHHHHHHTTTC--------SSEEEEEEETTSS------------------------CCCT
T ss_pred cEEEEEecCcChhHHHhhHHHHHHHHHhccC--------CCEEEEEEECCch------------------------hhHh
Confidence 9999999999999999999999999998753 3577777776542 3457
Q ss_pred hcCcCceeeEEEECCCCc--EEEcccchhhhhccccCCCCCHHHHHHHHHHHHHHhccCC
Q 013684 318 YFDVQGIPCLVIIGPEGK--TVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNLP 375 (438)
Q Consensus 318 ~~~v~~~P~~~lid~~G~--i~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~i~~~~~~~~ 375 (438)
.|+|.++||+++++++|+ ++... |. ...+.|.+.|++.+...+
T Consensus 420 ~~~v~~~Pt~~~~~~~~~~~~~~~~--------G~-------~~~~~l~~~l~~~~~~~~ 464 (481)
T 3f8u_A 420 PYEVRGFPTIYFSPANKKLNPKKYE--------GG-------RELSDFISYLQREATNPP 464 (481)
T ss_dssp TCCCCSSSEEEEECTTCTTSCEECC--------SC-------CSHHHHHHHHHHHCSSCC
T ss_pred hCCCcccCEEEEEeCCCeEeeeEeC--------CC-------CCHHHHHHHHHHhcCCcc
Confidence 899999999999988876 33322 21 124667777777655443
No 234
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.47 E-value=1.2e-13 Score=117.19 Aligned_cols=84 Identities=21% Similarity=0.357 Sum_probs=75.0
Q ss_pred ccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccC
Q 013684 56 STKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPY 135 (438)
Q Consensus 56 ~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~ 135 (438)
+.+.+|..+.++.++||+++|+||++||++|+.+.|.|.++++++++ ++.++.|++|..
T Consensus 36 l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~------------------ 94 (141)
T 3hxs_A 36 IADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG---KIYIYKVNVDKE------------------ 94 (141)
T ss_dssp TCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT---TCEEEEEETTTC------------------
T ss_pred hhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC---ceEEEEEECCCC------------------
Confidence 45888999999999999999999999999999999999999999864 388888887754
Q ss_pred CChHHHHHHhhhcCcCccceEEEecCCCCCCCcc
Q 013684 136 SDLETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 169 (438)
Q Consensus 136 ~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~ 169 (438)
..+++.|+|.++|+++++++ +|+++
T Consensus 95 ------~~~~~~~~v~~~Pt~~~~~~---~g~~~ 119 (141)
T 3hxs_A 95 ------PELARDFGIQSIPTIWFVPM---KGEPQ 119 (141)
T ss_dssp ------HHHHHHTTCCSSSEEEEECS---SSCCE
T ss_pred ------HHHHHHcCCCCcCEEEEEeC---CCCEE
Confidence 67889999999999999998 88876
No 235
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.47 E-value=1.3e-13 Score=115.21 Aligned_cols=81 Identities=19% Similarity=0.378 Sum_probs=65.6
Q ss_pred eeeccccCCCEEEEEEecCCChhhhhhhHHH---HHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcc
Q 013684 228 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLA 304 (438)
Q Consensus 228 ~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~ 304 (438)
.+.++..+||+++|+||++||++|+.+.|.+ ..+.+.+... +.++.|+++.+.
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~----------~~~~~vd~~~~~-------------- 74 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRH----------FVNLKMDMEKGE-------------- 74 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHH----------SEEEEECSSSTT--------------
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcC----------eEEEEEecCCcc--------------
Confidence 4555556799999999999999999999998 6666666544 667777666421
Q ss_pred cccCCchhHHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 305 LPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 305 ~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
...+++.|+|.++|+++++|++|+++.+
T Consensus 75 -------~~~~~~~~~v~~~Pt~~~~d~~G~~~~~ 102 (130)
T 2kuc_A 75 -------GVELRKKYGVHAYPTLLFINSSGEVVYR 102 (130)
T ss_dssp -------HHHHHHHTTCCSSCEEEEECTTSCEEEE
T ss_pred -------hHHHHHHcCCCCCCEEEEECCCCcEEEE
Confidence 4788999999999999999999999876
No 236
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.47 E-value=3e-13 Score=108.96 Aligned_cols=71 Identities=23% Similarity=0.508 Sum_probs=63.1
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+||++||++|+.+.|.+.++++++++ ++.++.|+++.+ .+
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 65 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQG----------KLTVAKLNIDQN-----------------------PG 65 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TEEEEEEETTTC-----------------------TT
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC----------CcEEEEEECCCC-----------------------HH
Confidence 578999999999999999999999999988864 488999988755 46
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|++.++|+++++ ++|+++.+
T Consensus 66 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 89 (108)
T 2trx_A 66 TAPKYGIRGIPTLLLF-KNGEVAAT 89 (108)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCcccCEEEEE-eCCEEEEE
Confidence 8899999999999999 89999876
No 237
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.46 E-value=1.3e-13 Score=111.06 Aligned_cols=83 Identities=20% Similarity=0.330 Sum_probs=68.6
Q ss_pred CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCC
Q 013684 222 GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 301 (438)
Q Consensus 222 ~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 301 (438)
..+++ .+...-.++++++|+||++||++|+.+.|.+.+++++++++ +.++.|++|..
T Consensus 8 ~l~~~-~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~------------ 64 (109)
T 3tco_A 8 VLTEE-NFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK----------AVFGRLNVDEN------------ 64 (109)
T ss_dssp ECCTT-THHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT----------SEEEEEETTTC------------
T ss_pred EecHH-HHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC----------ceEEEEccccC------------
Confidence 33444 44433335899999999999999999999999999988753 78888888765
Q ss_pred CcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 302 WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 302 ~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
..+++.|+|.++|+++++ ++|+++.+
T Consensus 65 -----------~~~~~~~~i~~~Pt~~~~-~~g~~~~~ 90 (109)
T 3tco_A 65 -----------QKIADKYSVLNIPTTLIF-VNGQLVDS 90 (109)
T ss_dssp -----------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -----------HHHHHhcCcccCCEEEEE-cCCcEEEe
Confidence 678999999999999999 99999876
No 238
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.46 E-value=1.2e-13 Score=115.86 Aligned_cols=70 Identities=17% Similarity=0.235 Sum_probs=63.6
Q ss_pred CEEEEEEecCCC--hhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 237 KTVGLYFSARWC--IPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 237 k~vll~F~a~wC--~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
++|||+|||+|| ++|+.+.|.|.++.++|.++ +.|+.|++|.+ .+
T Consensus 34 ~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~----------v~~~KVdvDe~-----------------------~~ 80 (137)
T 2qsi_A 34 KIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR----------LVAAEVAAEAE-----------------------RG 80 (137)
T ss_dssp SEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT----------EEEEEECGGGH-----------------------HH
T ss_pred CcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC----------cEEEEEECCCC-----------------------HH
Confidence 499999999999 99999999999999999754 88888888754 78
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
++.+|||+++||+++| ++|+++.+.
T Consensus 81 la~~ygV~siPTlilF-kdG~~v~~~ 105 (137)
T 2qsi_A 81 LMARFGVAVCPSLAVV-QPERTLGVI 105 (137)
T ss_dssp HHHHHTCCSSSEEEEE-ECCEEEEEE
T ss_pred HHHHcCCccCCEEEEE-ECCEEEEEE
Confidence 9999999999999999 999999883
No 239
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.46 E-value=1.5e-13 Score=110.50 Aligned_cols=70 Identities=16% Similarity=0.281 Sum_probs=54.7
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+||++||++|+.+.|.+.++++++. ++.++.|++|.+ .+
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-----------~~~~~~vd~~~~-----------------------~~ 62 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-----------YVEKIEILLQDM-----------------------QE 62 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-----------TEEEEEEEECCC-------------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-----------CceEEEEECCCC-----------------------HH
Confidence 57999999999999999999999999988773 588999998865 56
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++||++++ ++|+++.+
T Consensus 63 l~~~~~v~~~Pt~~~~-~~G~~~~~ 86 (105)
T 4euy_A 63 IAGRYAVFTGPTVLLF-YNGKEILR 86 (105)
T ss_dssp -------CCCCEEEEE-ETTEEEEE
T ss_pred HHHhcCCCCCCEEEEE-eCCeEEEE
Confidence 8899999999999999 69998876
No 240
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.45 E-value=2e-13 Score=110.79 Aligned_cols=73 Identities=22% Similarity=0.350 Sum_probs=61.4
Q ss_pred ccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchh
Q 013684 233 SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 312 (438)
Q Consensus 233 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~ 312 (438)
+.+|++++|+||++||++|+.+.|.+.+++++++ ++.++.|+++.. .
T Consensus 21 ~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-----------~v~~~~vd~~~~----------------------~ 67 (111)
T 2pu9_C 21 AAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-----------DVIFLKLDCNQE----------------------N 67 (111)
T ss_dssp TCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEECSST----------------------T
T ss_pred hcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-----------CeEEEEEecCcc----------------------h
Confidence 3468999999999999999999999999988765 478888888732 2
Q ss_pred HHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 313 KELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 313 ~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
..+++.|+|.++||+++ +++|+++.+
T Consensus 68 ~~~~~~~~v~~~Pt~~~-~~~G~~~~~ 93 (111)
T 2pu9_C 68 KTLAKELGIRVVPTFKI-LKENSVVGE 93 (111)
T ss_dssp HHHHHHHCCSBSSEEEE-ESSSSEEEE
T ss_pred HHHHHHcCCCeeeEEEE-EeCCcEEEE
Confidence 67899999999999555 499999876
No 241
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.45 E-value=1.4e-13 Score=111.91 Aligned_cols=72 Identities=21% Similarity=0.556 Sum_probs=61.3
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.|++++|+||++||++|+.+.|.+.+++++++.. ++.++.|+++.+ .+
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~---------~~~~~~vd~~~~-----------------------~~ 67 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNS---------NVSFLSIDADEN-----------------------SE 67 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGT---------TSEEEEEETTTC-----------------------HH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCC---------CEEEEEEecccC-----------------------HH
Confidence 4789999999999999999999999999887533 588999988765 57
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++||++++ ++|+++.+
T Consensus 68 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 91 (112)
T 3d6i_A 68 ISELFEISAVPYFIII-HKGTILKE 91 (112)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCcccEEEEE-ECCEEEEE
Confidence 8899999999999999 79999876
No 242
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.45 E-value=1.1e-13 Score=115.72 Aligned_cols=84 Identities=18% Similarity=0.383 Sum_probs=72.4
Q ss_pred CCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCC
Q 013684 58 KEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSD 137 (438)
Q Consensus 58 ~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d 137 (438)
..+++.+.....+||+++|+||++||++|+.+.|.|.++++++++ ++.++.|++|..
T Consensus 29 ~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~---~v~~~~vd~d~~-------------------- 85 (128)
T 3ul3_B 29 QNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK---RIYLLKVDLDKN-------------------- 85 (128)
T ss_dssp CCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG---GEEEEEEEGGGC--------------------
T ss_pred cCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CeEEEEEECCCC--------------------
Confidence 667777778888999999999999999999999999999999974 388888887754
Q ss_pred hHHHHHHhhhcCcCccceEEEecCCCCCCCccccc
Q 013684 138 LETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 138 ~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
..+++.|+|.++|+++++ + +|+++.+.
T Consensus 86 ----~~l~~~~~v~~~Pt~~~~-~---~G~~~~~~ 112 (128)
T 3ul3_B 86 ----ESLARKFSVKSLPTIILL-K---NKTMLARK 112 (128)
T ss_dssp ----HHHHHHTTCCSSSEEEEE-E---TTEEEEEE
T ss_pred ----HHHHHHcCCCCcCEEEEE-E---CCEEEEEe
Confidence 578899999999999999 5 88877543
No 243
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.45 E-value=3.9e-14 Score=119.25 Aligned_cols=95 Identities=8% Similarity=0.042 Sum_probs=72.2
Q ss_pred CCCEEEEEEecCC--ChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchh
Q 013684 235 VGKTVGLYFSARW--CIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 312 (438)
Q Consensus 235 ~gk~vll~F~a~w--C~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~ 312 (438)
.+++|||+|||+| |++|+.+.|.|.+++++|.++ .+.|+.|++|.+
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~---------~v~~~KVdvDe~----------------------- 80 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDY---------TWQVAIADLEQS----------------------- 80 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTS---------CCEEEECCHHHH-----------------------
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCC---------eEEEEEEECCCC-----------------------
Confidence 4567899999999 999999999999999998642 278888887743
Q ss_pred HHHHHhcCcCceeeEEEECCCCcEEEcccchhhhhccccCCCCCHHHHHHHHHHHHHHhccCCC
Q 013684 313 KELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNLPR 376 (438)
Q Consensus 313 ~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~i~~~~~~~~~ 376 (438)
.+++.+|||.++||+++| ++|+++.+ ..|... . ++|.+.|++.++..+.
T Consensus 81 ~~lA~~ygV~sIPTlilF-k~G~~v~~-------~~G~~~----k---~~l~~~i~~~l~~~~~ 129 (140)
T 2qgv_A 81 EAIGDRFGAFRFPATLVF-TGGNYRGV-------LNGIHP----W---AELINLMRGLVEPQQE 129 (140)
T ss_dssp HHHHHHHTCCSSSEEEEE-ETTEEEEE-------EESCCC----H---HHHHHHHHHHHC----
T ss_pred HHHHHHcCCccCCEEEEE-ECCEEEEE-------EecCCC----H---HHHHHHHHHHhcCCCC
Confidence 789999999999999999 99999988 344322 2 3455566666644443
No 244
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.45 E-value=3.5e-13 Score=109.41 Aligned_cols=71 Identities=27% Similarity=0.483 Sum_probs=62.9
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.||+++|+||++||++|+.+.|.+.++++++++ ++.++.|++|.+ .+
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 68 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD----------KIEIVKLNIDEN-----------------------PG 68 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC-----------------------HH
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC----------CeEEEEEEcCCC-----------------------HH
Confidence 478999999999999999999999999988864 388999998865 56
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++||++++ ++|+++.+
T Consensus 69 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 92 (112)
T 1t00_A 69 TAAKYGVMSIPTLNVY-QGGEVAKT 92 (112)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHhCCCCcccEEEEE-eCCEEEEE
Confidence 8899999999999888 89999876
No 245
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.45 E-value=2.6e-13 Score=113.49 Aligned_cols=83 Identities=19% Similarity=0.377 Sum_probs=67.8
Q ss_pred CCCCCceeecc-ccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcC
Q 013684 222 GHPPDEKVPVS-SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTM 300 (438)
Q Consensus 222 ~~~g~~~~~l~-~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 300 (438)
..+++ .+... .-.+++++|+||++||++|+.+.|.+.++++++++ ++.++.|++|.+
T Consensus 26 ~l~~~-~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~----------~v~~~~vd~~~~----------- 83 (128)
T 2o8v_B 26 HLTDD-SFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG----------KLTVAKLNIDQN----------- 83 (128)
T ss_dssp EECTT-THHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT----------TEEEEEEETTTC-----------
T ss_pred ecChh-hHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC----------CeEEEEEECCCC-----------
Confidence 44444 44322 23579999999999999999999999999988864 488999998765
Q ss_pred CCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 301 PWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 301 ~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.++++.|+|.++||++++ ++|+++.+
T Consensus 84 ------------~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 109 (128)
T 2o8v_B 84 ------------PGTAPKYGIRGIPTLLLF-KNGEVAAT 109 (128)
T ss_dssp ------------CTTSGGGTCCSSSEEEEE-ETTEEEEE
T ss_pred ------------HHHHHHcCCCccCEEEEE-eCCEEEEE
Confidence 457889999999999999 99999876
No 246
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.45 E-value=3.4e-13 Score=112.14 Aligned_cols=71 Identities=27% Similarity=0.503 Sum_probs=62.5
Q ss_pred cCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhH
Q 013684 234 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 313 (438)
Q Consensus 234 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 313 (438)
.+|++++|+||++||++|+.+.|.|.+++++++ ++.++.|++|.. .
T Consensus 36 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-----------~v~~~~vd~d~~-----------------------~ 81 (124)
T 1xfl_A 36 ESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-----------NVLFLKVDTDEL-----------------------K 81 (124)
T ss_dssp HTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-----------SEEEEEEETTTS-----------------------H
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----------CcEEEEEECccC-----------------------H
Confidence 368999999999999999999999999888764 488898888754 6
Q ss_pred HHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 314 ELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 314 ~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
++++.|+|.++||++++ ++|+++.+
T Consensus 82 ~l~~~~~v~~~Pt~~~~-~~G~~~~~ 106 (124)
T 1xfl_A 82 SVASDWAIQAMPTFMFL-KEGKILDK 106 (124)
T ss_dssp HHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHHcCCCccCEEEEE-ECCEEEEE
Confidence 78999999999998888 89999876
No 247
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.45 E-value=1.6e-13 Score=118.00 Aligned_cols=69 Identities=22% Similarity=0.297 Sum_probs=61.1
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++|+|+|||+||++|+.+.|.|.+++++++++ +.++.|++|.. .+
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~----------~~~~~vd~d~~-----------------------~~ 68 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM----------AAIYLVDVDQT-----------------------AV 68 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT----------EEEEEEETTTC-----------------------CH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc----------eEEEEEECCcC-----------------------HH
Confidence 4799999999999999999999999999888643 88999988755 67
Q ss_pred HHHhcCcCceeeEEEECCCCcEE
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTV 337 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~ 337 (438)
+++.|+|.++||++++ ++|+++
T Consensus 69 l~~~~~v~~~Pt~~~~-~~G~~v 90 (149)
T 3gix_A 69 YTQYFDISYIPSTVFF-FNGQHM 90 (149)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEE
T ss_pred HHHHcCCCccCeEEEE-ECCeEE
Confidence 8999999999999955 899988
No 248
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.45 E-value=3.2e-13 Score=108.17 Aligned_cols=71 Identities=21% Similarity=0.402 Sum_probs=63.8
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
++++++|+||++||++|+.+.|.+.+++++++++ +.++.|++|.+ .+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~-----------------------~~ 64 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK----------ADILKLDVDEN-----------------------PS 64 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT----------CEEEEEETTTC-----------------------HH
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC----------cEEEEEECCcC-----------------------HH
Confidence 7899999999999999999999999999988753 88999998865 56
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|++.++|+++++ ++|+++.+
T Consensus 65 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 88 (106)
T 3die_A 65 TAAKYEVMSIPTLIVF-KDGQPVDK 88 (106)
T ss_dssp HHHHTTCCSBSEEEEE-ETTEEEEE
T ss_pred HHHhCCCcccCEEEEE-eCCeEEEE
Confidence 8899999999999999 59998876
No 249
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.44 E-value=4.4e-13 Score=107.77 Aligned_cols=71 Identities=24% Similarity=0.481 Sum_probs=62.6
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.|++++|+||++||++|+.+.|.+.++++++++ ++.++.|++|.+ .+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 64 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD----------KLKCVKLNTDES-----------------------PN 64 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC-----------------------HH
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC----------ceEEEEEECCCC-----------------------HH
Confidence 478999999999999999999999999988864 388999988765 57
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++|+++++ ++|+++.+
T Consensus 65 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 88 (107)
T 1dby_A 65 VASEYGIRSIPTIMVF-KGGKKCET 88 (107)
T ss_dssp HHHHHTCCSSCEEEEE-SSSSEEEE
T ss_pred HHHHCCCCcCCEEEEE-eCCEEEEE
Confidence 8899999999999888 79999876
No 250
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.44 E-value=2.2e-13 Score=109.20 Aligned_cols=71 Identities=27% Similarity=0.485 Sum_probs=63.1
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.|++++|+||++||++|+.+.|.+.++++++++ ++.++.|++|.+ .+
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~----------~v~~~~v~~~~~-----------------------~~ 62 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD----------KVTVAKLNVDEN-----------------------PE 62 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT----------TCEEEEEETTTC-----------------------HH
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC----------CcEEEEEECcCC-----------------------HH
Confidence 578999999999999999999999999988764 388999998765 56
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++|+++++ ++|+++.+
T Consensus 63 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 86 (105)
T 1nsw_A 63 TTSQFGIMSIPTLILF-KGGRPVKQ 86 (105)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCccccEEEEE-eCCeEEEE
Confidence 8899999999999999 89998876
No 251
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.44 E-value=1.1e-13 Score=115.12 Aligned_cols=88 Identities=22% Similarity=0.241 Sum_probs=72.1
Q ss_pred ccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccC
Q 013684 56 STKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPY 135 (438)
Q Consensus 56 ~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~ 135 (438)
..+.+|........+||+++|+||++||++|+.+.|.|.+++++++ . ++.++.|++|.+..
T Consensus 11 ~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~--~v~~~~v~~~~d~~---------------- 71 (126)
T 2l57_A 11 FQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-G--KFNIYYARLEEEKN---------------- 71 (126)
T ss_dssp TTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-S--SCEEEEEETTSSHH----------------
T ss_pred ccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-C--CeEEEEEeCCCCch----------------
Confidence 5556655544666689999999999999999999999999999986 2 48899998542222
Q ss_pred CChHHHHHHhhhcCcCccceEEEecCCCCCCCcccc
Q 013684 136 SDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 136 ~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
..+++.|+|.++|+++++++ +|+++.+
T Consensus 72 ------~~~~~~~~v~~~Pt~~~~~~---~G~~~~~ 98 (126)
T 2l57_A 72 ------IDLAYKYDANIVPTTVFLDK---EGNKFYV 98 (126)
T ss_dssp ------HHHHHHTTCCSSSEEEEECT---TCCEEEE
T ss_pred ------HHHHHHcCCcceeEEEEECC---CCCEEEE
Confidence 68899999999999999999 9998765
No 252
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.44 E-value=1e-13 Score=121.41 Aligned_cols=77 Identities=14% Similarity=0.200 Sum_probs=63.5
Q ss_pred eccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCC
Q 013684 230 PVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGD 309 (438)
Q Consensus 230 ~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~ 309 (438)
.+++++|++++|+|||+|||+|+.+.|.|.+++++++ ++.++.|+.|.+
T Consensus 48 ~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-----------~v~~~~v~~d~~-------------------- 96 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-----------NIELAIISKGRA-------------------- 96 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-----------TEEEEEECHHHH--------------------
T ss_pred HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-----------CcEEEEEECCCC--------------------
Confidence 3566789999999999999999999999999987653 578888877643
Q ss_pred chhHHHHHhcC---cCceeeEEEECCCCcEEEcc
Q 013684 310 PTIKELTKYFD---VQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 310 d~~~~l~~~~~---v~~~P~~~lid~~G~i~~~~ 340 (438)
.++.+.|+ +.++||++++|++|+++.+.
T Consensus 97 ---~~~~~~~~~~~v~~iPt~i~~~~~G~~~~~~ 127 (167)
T 1z6n_A 97 ---EDDLRQRLALERIAIPLVLVLDEEFNLLGRF 127 (167)
T ss_dssp ---HHHTTTTTTCSSCCSSEEEEECTTCCEEEEE
T ss_pred ---HHHHHHHHHcCCCCcCeEEEECCCCCEEEEE
Confidence 34555565 99999999999999998764
No 253
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.44 E-value=3.8e-13 Score=108.39 Aligned_cols=70 Identities=14% Similarity=0.244 Sum_probs=62.0
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
++++++|+||++||++|+.+.|.+.+++++++ ++.++.|++|.+ .+
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~-----------~~~~~~vd~~~~-----------------------~~ 65 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP-----------QAVFLEVDVHQC-----------------------QG 65 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTS-----------------------HH
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC-----------CcEEEEEECccC-----------------------HH
Confidence 57899999999999999999999999988873 478999988755 56
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++||++++ ++|+++.+
T Consensus 66 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 89 (107)
T 1gh2_A 66 TAATNNISATPTFQFF-RNKVRIDQ 89 (107)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHhcCCCcccEEEEE-ECCeEEEE
Confidence 8899999999999999 89998876
No 254
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.44 E-value=1.7e-13 Score=110.59 Aligned_cols=74 Identities=18% Similarity=0.339 Sum_probs=61.6
Q ss_pred cccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhh
Q 013684 67 SDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 146 (438)
Q Consensus 67 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 146 (438)
.+..+|+|+|+|||+||++|+.+.|.+.++++.++ ++.++.|++|.. .++++
T Consensus 16 ~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~vd~d~~------------------------~~l~~ 67 (105)
T 3zzx_A 16 NEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS----DVVFLKVDVDEC------------------------EDIAQ 67 (105)
T ss_dssp HHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----TEEEEEEETTTC------------------------HHHHH
T ss_pred HhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC----CeEEEEEecccC------------------------HHHHH
Confidence 34457999999999999999999999999988763 477777776644 67899
Q ss_pred hcCcCccceEEEecCCCCCCCccccc
Q 013684 147 KFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 147 ~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
.|+|.++||++++. +|+.+.+.
T Consensus 68 ~~~V~~~PT~~~~~----~G~~v~~~ 89 (105)
T 3zzx_A 68 DNQIACMPTFLFMK----NGQKLDSL 89 (105)
T ss_dssp HTTCCBSSEEEEEE----TTEEEEEE
T ss_pred HcCCCeecEEEEEE----CCEEEEEE
Confidence 99999999998885 89887654
No 255
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.43 E-value=2.3e-13 Score=120.72 Aligned_cols=116 Identities=14% Similarity=0.223 Sum_probs=98.1
Q ss_pred hhcCCCCCcc-C--C---------CC----Cceeeccc-cCCCEEEEEEe-cCCChhhh-hhhHHHHHHHHHH-Hhhhhh
Q 013684 212 LTNHDRGYLL-G--H---------PP----DEKVPVSS-LVGKTVGLYFS-ARWCIPCE-KFMPKLLSIYQKI-KQNLVE 271 (438)
Q Consensus 212 ~g~~~~~f~l-~--~---------~g----~~~~~l~~-~~gk~vll~F~-a~wC~~C~-~~~p~l~~l~~~~-~~~~~~ 271 (438)
+|..+|+|++ + . +| + .+++++ ++||+++|+|| +.|||.|. .+++.+++.+++| +..
T Consensus 3 vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~-~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~--- 78 (182)
T 1xiy_A 3 ENDLIPNVKVMIDVRNMNNISDTDGSPNDFT-SIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKEN--- 78 (182)
T ss_dssp TTCBCCCCEEEEEHHHHTC--------CCEE-EEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTS---
T ss_pred CCCCCCCeEEEcccccccccccccCCCccce-eEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhC---
Confidence 5889999999 6 3 67 7 899998 69999999888 67999999 8999999999999 765
Q ss_pred cCCCCCCEE-EEEEecCCCHHHHHHHHhcCCCc-ccccCCchhHHHHHhcCcC-----------ceeeEEEECCCCcEEE
Q 013684 272 KGDALEDFE-VVFVSTDRDQTSFESYFGTMPWL-ALPFGDPTIKELTKYFDVQ-----------GIPCLVIIGPEGKTVT 338 (438)
Q Consensus 272 ~~~~~~~~~-vv~is~d~~~~~~~~~~~~~~~~-~~p~~~d~~~~l~~~~~v~-----------~~P~~~lid~~G~i~~ 338 (438)
+++ |++||+| +....++|.++.+ + .||++.|.+.+++++||+. ..+.+|||| +|+|++
T Consensus 79 ------g~~~V~gvS~D-~~~~~~~~~~~~~-~~~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG~V~~ 149 (182)
T 1xiy_A 79 ------NFDDIYCITNN-DIYVLKSWFKSMD-IKKIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NNILVK 149 (182)
T ss_dssp ------CCSEEEEEESS-CHHHHHHHHHHTT-CCSSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEE-TTEEEE
T ss_pred ------CCcEEEEEeCC-CHHHHHHHHHHcC-CCCceEEEeCchHHHHHhCCceeccccCCCCceEEEEEEEc-CCEEEE
Confidence 784 9999998 6677788888777 5 6999999999999999973 256789998 999998
Q ss_pred cc
Q 013684 339 KQ 340 (438)
Q Consensus 339 ~~ 340 (438)
..
T Consensus 150 ~~ 151 (182)
T 1xiy_A 150 MF 151 (182)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 256
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.43 E-value=1.9e-13 Score=132.44 Aligned_cols=111 Identities=16% Similarity=0.139 Sum_probs=90.3
Q ss_pred ccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHH
Q 013684 41 SLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLN 119 (438)
Q Consensus 41 ~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~ 119 (438)
+.+|+|+ +.+.+|++++|++++||+|+|+|| +.|||.|..+++.|++ ... .+++|++||.| +.+
T Consensus 2 ak~p~F~--------l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~~--~~~~v~gis~D-~~~ 66 (322)
T 4eo3_A 2 ARVKHFE--------LLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSR----ENF--EKAQVVGISRD-SVE 66 (322)
T ss_dssp CBCCCCE--------EEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHH----SCC--TTEEEEEEESC-CHH
T ss_pred CCCCCcE--------EECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHH----Hhh--CCCEEEEEeCC-CHH
Confidence 4688999 999999999999999999999999 6899999999888754 122 35999999998 567
Q ss_pred HHHHhHhcCCcccccCCChHHHHHHhhhcCc----CccceEEEecCCCCCCCcccc
Q 013684 120 AFNNYRACMPWLAVPYSDLETKKALNRKFDI----EGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 120 ~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v----~~~P~~~lvd~~~~~G~v~~~ 171 (438)
..++|.++++..+....|.+ ..+++.||| ..+|++||||+ +|+|++.
T Consensus 67 ~~~~f~~~~~l~fp~l~D~~--~~v~~~ygv~~~~~~~r~tfiId~---~G~i~~~ 117 (322)
T 4eo3_A 67 ALKRFKEKNDLKVTLLSDPE--GILHEFFNVLENGKTVRSTFLIDR---WGFVRKE 117 (322)
T ss_dssp HHHHHHHHHTCCSEEEECTT--CHHHHHTTCEETTEECCEEEEECT---TSBEEEE
T ss_pred HHHHHHHhhCCceEEEEcCc--hHHHHhcCCCCCCcCccEEEEECC---CCEEEEE
Confidence 77888887664433334554 789999999 45899999999 9999754
No 257
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.43 E-value=1.1e-12 Score=109.20 Aligned_cols=86 Identities=12% Similarity=0.111 Sum_probs=67.5
Q ss_pred CCCCCceeecccc-CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcC
Q 013684 222 GHPPDEKVPVSSL-VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTM 300 (438)
Q Consensus 222 ~~~g~~~~~l~~~-~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 300 (438)
.+++. .+...-. .+++++|+|||+||++|+.+.|.+.++++++..+ ...+++.++.|+++..
T Consensus 19 ~l~~~-~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~-----~~~~~v~~~~vd~~~~----------- 81 (127)
T 3h79_A 19 ELTDE-TFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQK-----RNHLTFVAARIDGEKY----------- 81 (127)
T ss_dssp ECCTT-THHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTS-----TTTTTEEEEEEETTTC-----------
T ss_pred ECChh-hHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhc-----ccCCCeEEEEEEcccc-----------
Confidence 55555 4443222 4799999999999999999999999999988632 0124688888888755
Q ss_pred CCcccccCCchhHHHHHhcCcCceeeEEEECCCCcE
Q 013684 301 PWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 336 (438)
Q Consensus 301 ~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i 336 (438)
.++++.|+|.++||++++++++++
T Consensus 82 ------------~~l~~~~~v~~~Pt~~~~~~g~~~ 105 (127)
T 3h79_A 82 ------------PDVIERMRVSGFPTMRYYTRIDKQ 105 (127)
T ss_dssp ------------HHHHHHTTCCSSSEEEEECSSCSS
T ss_pred ------------HhHHHhcCCccCCEEEEEeCCCCC
Confidence 678999999999999999766653
No 258
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.43 E-value=4.5e-13 Score=112.35 Aligned_cols=83 Identities=19% Similarity=0.317 Sum_probs=64.6
Q ss_pred CCCCCceeecccc-CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcC
Q 013684 222 GHPPDEKVPVSSL-VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTM 300 (438)
Q Consensus 222 ~~~g~~~~~l~~~-~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 300 (438)
.+++. .+..... .+++++|+||++||++|+.+.|.|.++++++++. .++.++.|+++..
T Consensus 11 ~l~~~-~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~--------~~~~~~~vd~~~~----------- 70 (133)
T 2dj3_A 11 VVVGK-TFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQ--------KDLVIAKMDATAN----------- 70 (133)
T ss_dssp ECCTT-TCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTS--------SSEEEEEECTTTS-----------
T ss_pred EEcCC-CHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC--------CCEEEEEecCCcC-----------
Confidence 55566 5554333 4899999999999999999999999999998742 2577777776543
Q ss_pred CCcccccCCchhHHHHHhcCcCceeeEEEECCCCcE
Q 013684 301 PWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 336 (438)
Q Consensus 301 ~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i 336 (438)
..+++.|+|.++||+++++++|++
T Consensus 71 ------------~~~~~~~~v~~~Pt~~~~~~g~~~ 94 (133)
T 2dj3_A 71 ------------DITNDQYKVEGFPTIYFAPSGDKK 94 (133)
T ss_dssp ------------CCCCSSCCCSSSSEEEEECTTCTT
T ss_pred ------------HHHHhhcCCCcCCEEEEEeCCCcc
Confidence 345678999999999999877653
No 259
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.43 E-value=6e-13 Score=112.58 Aligned_cols=85 Identities=27% Similarity=0.397 Sum_probs=67.3
Q ss_pred CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCC
Q 013684 222 GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 301 (438)
Q Consensus 222 ~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 301 (438)
.+++. .+...-..+|+++|+||++||++|+.+.|.|.+++++++++ +.++.++.|+++.+
T Consensus 21 ~l~~~-~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-------~~~v~~~~vd~~~~------------ 80 (140)
T 2dj1_A 21 VLNDG-NFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDN-------DPPIAVAKIDATSA------------ 80 (140)
T ss_dssp ECCTT-THHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSS-------SSCCEEEEECTTTC------------
T ss_pred EcChH-hHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhcc-------CCceEEEEEeCccc------------
Confidence 44555 44433345899999999999999999999999999999864 23477777776644
Q ss_pred CcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEE
Q 013684 302 WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVT 338 (438)
Q Consensus 302 ~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~ 338 (438)
..+++.|+|.++|+++++ ++|++..
T Consensus 81 -----------~~~~~~~~v~~~Pt~~~~-~~G~~~~ 105 (140)
T 2dj1_A 81 -----------SMLASKFDVSGYPTIKIL-KKGQAVD 105 (140)
T ss_dssp -----------HHHHHHTTCCSSSEEEEE-ETTEEEE
T ss_pred -----------HHHHHHCCCCccCeEEEE-ECCcEEE
Confidence 678999999999999999 8898443
No 260
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.43 E-value=5.4e-13 Score=109.89 Aligned_cols=71 Identities=25% Similarity=0.512 Sum_probs=63.0
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.|++++|+||++||++|+.+.|.|.++++++.+ ++.++.|++|.+ .+
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~----------~v~~~~vd~d~~-----------------------~~ 76 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG----------KVVMAKVDIDDH-----------------------TD 76 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------SSEEEEEETTTT-----------------------HH
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC----------CeEEEEEeCCCC-----------------------HH
Confidence 478999999999999999999999999988754 488999988754 57
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++|+++++ ++|+++.+
T Consensus 77 l~~~~~v~~~Pt~~~~-~~G~~~~~ 100 (119)
T 1w4v_A 77 LAIEYEVSAVPTVLAM-KNGDVVDK 100 (119)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCcccEEEEE-eCCcEEEE
Confidence 8899999999999999 89999876
No 261
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.42 E-value=3.6e-13 Score=112.48 Aligned_cols=71 Identities=24% Similarity=0.431 Sum_probs=61.7
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+||++||++|+.+.|.+.++++++++. +.++.|++|.+ ..
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~----------~~~~~vd~~~~-----------------------~~ 80 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV----------VKVGAVNADKH-----------------------QS 80 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT----------SEEEEEETTTC-----------------------HH
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc----------eEEEEEeCCCC-----------------------HH
Confidence 4789999999999999999999999999888643 78888888755 67
Q ss_pred HHHhcCcCceeeEEEECCCCcEEE
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVT 338 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~ 338 (438)
+++.|+|.++||+++++++|+++.
T Consensus 81 l~~~~~v~~~Pt~~~~~~~~~~~~ 104 (130)
T 2dml_A 81 LGGQYGVQGFPTIKIFGANKNKPE 104 (130)
T ss_dssp HHHHHTCCSSSEEEEESSCTTSCE
T ss_pred HHHHcCCCccCEEEEEeCCCCeEE
Confidence 899999999999999998887333
No 262
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.42 E-value=6.8e-13 Score=107.92 Aligned_cols=71 Identities=24% Similarity=0.502 Sum_probs=63.7
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+||++||++|+.+.|.+.++++.+++ ++.++.|++|.+ .+
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~v~~~~v~~~~~-----------------------~~ 70 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYSD----------RLKVVKLEIDPN-----------------------PT 70 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT----------TCEEEEEESTTC-----------------------HH
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC----------cEEEEEEEcCCC-----------------------HH
Confidence 578999999999999999999999999988864 388999998865 56
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++|+++++ ++|+++.+
T Consensus 71 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 94 (115)
T 1thx_A 71 TVKKYKVEGVPALRLV-KGEQILDS 94 (115)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCceeEEEEE-cCCEEEEE
Confidence 8899999999999999 99999876
No 263
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.42 E-value=1.8e-13 Score=115.25 Aligned_cols=74 Identities=19% Similarity=0.365 Sum_probs=58.9
Q ss_pred ccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCc
Q 013684 231 VSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDP 310 (438)
Q Consensus 231 l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d 310 (438)
+++.+||+++|+||++||++|+.+.|.+.++++++ ++.++.|++|..
T Consensus 35 l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~------------~v~~~~vd~~~~--------------------- 81 (133)
T 3cxg_A 35 FSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY------------YVTLVDIDVDIH--------------------- 81 (133)
T ss_dssp HTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE------------ECEEEEEETTTC---------------------
T ss_pred HHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc------------CEEEEEEeccch---------------------
Confidence 45667899999999999999999999988776543 256777776643
Q ss_pred hhHHHHHhcCcCceeeEEEE-CCCCc--EEEc
Q 013684 311 TIKELTKYFDVQGIPCLVII-GPEGK--TVTK 339 (438)
Q Consensus 311 ~~~~l~~~~~v~~~P~~~li-d~~G~--i~~~ 339 (438)
.++++.|+|.++||++++ +++|+ ++.+
T Consensus 82 --~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~~ 111 (133)
T 3cxg_A 82 --PKLNDQHNIKALPTFEFYFNLNNEWVLVHT 111 (133)
T ss_dssp --HHHHHHTTCCSSSEEEEEEEETTEEEEEEE
T ss_pred --HHHHHhcCCCCCCEEEEEEecCCCeEEEEE
Confidence 678899999999999999 44666 7766
No 264
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.42 E-value=1.1e-13 Score=119.04 Aligned_cols=106 Identities=13% Similarity=0.198 Sum_probs=78.0
Q ss_pred cccCCCEEEEEEecCCChhhhhhhHHHHHHH--HHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCC
Q 013684 232 SSLVGKTVGLYFSARWCIPCEKFMPKLLSIY--QKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGD 309 (438)
Q Consensus 232 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~--~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~ 309 (438)
+...||+|+|+|||+||++|+.+.|.+.+.. .++.+. .++.|++|.+.
T Consensus 40 A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~-----------~fv~V~vD~e~------------------- 89 (151)
T 3ph9_A 40 AQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQN-----------KFIMLNLMHET------------------- 89 (151)
T ss_dssp HHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHH-----------TCEEEEESSCC-------------------
T ss_pred HHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhc-----------CeEEEEecCCc-------------------
Confidence 3346899999999999999999999988642 222221 36777776331
Q ss_pred chhHHHHHhcCcCceeeEEEECCCCcEEEcccchhhhhccccCCCCCHHHHHHHHHHHHHHhccC
Q 013684 310 PTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL 374 (438)
Q Consensus 310 d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~i~~~~~~~ 374 (438)
..+...|++.++||++++|++|+++.+.. ..++...|.......+++.+.+++.++..
T Consensus 90 ---~~~~~~~~v~~~PT~~f~~~~G~~v~~~~----G~~~~~~~~~~~~~~~~ll~~~~~al~~~ 147 (151)
T 3ph9_A 90 ---TDKNLSPDGQYVPRIMFVDPSLTVRADIA----GRYSNRLYTYEPRDLPLLIENMKKALRLI 147 (151)
T ss_dssp ---SCGGGCTTCCCSSEEEEECTTSCBCTTCC----CSCTTSTTCCCGGGHHHHHHHHHHHHSCC
T ss_pred ---hhhHhhcCCCCCCEEEEECCCCCEEEEEe----CCcCCcccccchhhHHHHHHHHHHHHHHH
Confidence 22356789999999999999999988632 13344667788888899999988876644
No 265
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.42 E-value=4.1e-13 Score=107.46 Aligned_cols=71 Identities=25% Similarity=0.451 Sum_probs=62.6
Q ss_pred cCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhH
Q 013684 234 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 313 (438)
Q Consensus 234 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 313 (438)
.++++++|+||++||++|+.+.|.+.+++++++ ++.++.|++|.. .
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-----------~~~~~~vd~~~~-----------------------~ 63 (105)
T 3m9j_A 18 AGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS-----------NVIFLEVDVDDC-----------------------Q 63 (105)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHST-----------TSEEEEEETTTC-----------------------H
T ss_pred cCCCeEEEEEECCCChhhHHHHHHHHHHHHHcc-----------CeEEEEEEhhhh-----------------------H
Confidence 468899999999999999999999999988775 478888888755 5
Q ss_pred HHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 314 ELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 314 ~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.+++.|++.++||++++ ++|+++.+
T Consensus 64 ~~~~~~~v~~~Pt~~~~-~~g~~~~~ 88 (105)
T 3m9j_A 64 DVASESEVKSMPTFQFF-KKGQKVGE 88 (105)
T ss_dssp HHHHHTTCCBSSEEEEE-ETTEEEEE
T ss_pred HHHHHcCCCcCcEEEEE-ECCeEEEE
Confidence 78899999999999999 88988876
No 266
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.42 E-value=8.6e-13 Score=109.64 Aligned_cols=69 Identities=17% Similarity=0.331 Sum_probs=60.4
Q ss_pred CEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHHH
Q 013684 237 KTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELT 316 (438)
Q Consensus 237 k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~ 316 (438)
+.++|+||++||++|+.+.|.+.++++++++. ++.++.|+++.+ ..++
T Consensus 23 ~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~---------~v~~~~vd~~~~-----------------------~~~~ 70 (126)
T 1x5e_A 23 GDWMIEFYAPWCPACQNLQPEWESFAEWGEDL---------EVNIAKVDVTEQ-----------------------PGLS 70 (126)
T ss_dssp SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGG---------TCEEEEEETTTC-----------------------HHHH
T ss_pred CCEEEEEECCCCHHHHHHhHHHHHHHHHhccC---------CeEEEEEECcCC-----------------------HHHH
Confidence 34999999999999999999999999998754 588999988755 5688
Q ss_pred HhcCcCceeeEEEECCCCcEEE
Q 013684 317 KYFDVQGIPCLVIIGPEGKTVT 338 (438)
Q Consensus 317 ~~~~v~~~P~~~lid~~G~i~~ 338 (438)
+.|+|.++||++++ ++|++..
T Consensus 71 ~~~~v~~~Pt~~~~-~~G~~~~ 91 (126)
T 1x5e_A 71 GRFIINALPTIYHC-KDGEFRR 91 (126)
T ss_dssp HHTTCCSSSEEEEE-ETTEEEE
T ss_pred HHcCCcccCEEEEE-eCCeEEE
Confidence 99999999999999 8999643
No 267
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.42 E-value=6.9e-13 Score=114.85 Aligned_cols=71 Identities=18% Similarity=0.478 Sum_probs=63.7
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+||++||++|+.+.|.|+++++++.++ +.++.|++|.+ ..
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~----------v~~~~vd~~~~-----------------------~~ 109 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ----------VRLAKIDTQAH-----------------------PA 109 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT----------CEEEEEETTTS-----------------------TH
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC----------EEEEEEeCCcc-----------------------HH
Confidence 5789999999999999999999999999998743 88999988755 56
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++||++++ ++|+++.+
T Consensus 110 l~~~~~i~~~Pt~~~~-~~G~~~~~ 133 (155)
T 2ppt_A 110 VAGRHRIQGIPAFILF-HKGRELAR 133 (155)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCcCCEEEEE-eCCeEEEE
Confidence 8999999999999999 89999876
No 268
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.42 E-value=7.1e-13 Score=107.19 Aligned_cols=71 Identities=25% Similarity=0.520 Sum_probs=63.1
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+||++||++|+.+.|.+.++++++++ ++.++.|++|.. ..
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~----------~v~~~~vd~~~~-----------------------~~ 67 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE----------SFGFYYVDVEEE-----------------------KT 67 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT----------TSEEEEEETTTC-----------------------HH
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC----------ceEEEEEECCcC-----------------------hh
Confidence 468999999999999999999999999998864 388999998865 57
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++||++++ ++|+++.+
T Consensus 68 l~~~~~v~~~Pt~~~~-~~g~~~~~ 91 (111)
T 3gnj_A 68 LFQRFSLKGVPQILYF-KDGEYKGK 91 (111)
T ss_dssp HHHHTTCCSSCEEEEE-ETTEEEEE
T ss_pred HHHhcCCCcCCEEEEE-ECCEEEEE
Confidence 8999999999999999 89988765
No 269
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.42 E-value=9.7e-13 Score=105.54 Aligned_cols=71 Identities=30% Similarity=0.530 Sum_probs=63.7
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+||++||++|+.+.|.+.++++++++ ++.++.|+++.+ ..
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 65 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG----------KVTVAKVNIDDN-----------------------PE 65 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT----------SEEEEEEETTTC-----------------------CH
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC----------cEEEEEEECCCC-----------------------HH
Confidence 578999999999999999999999999998864 488999998755 56
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++|+++++ ++|+++.+
T Consensus 66 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 89 (107)
T 2i4a_A 66 TPNAYQVRSIPTLMLV-RDGKVIDK 89 (107)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHhcCCCccCEEEEE-eCCEEEEE
Confidence 8899999999999999 99999876
No 270
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.42 E-value=5.5e-13 Score=108.12 Aligned_cols=70 Identities=17% Similarity=0.390 Sum_probs=61.8
Q ss_pred CCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHH
Q 013684 236 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 315 (438)
Q Consensus 236 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 315 (438)
+++++|+||++||++|+.+.|.|.++++++++ ++.++.|++|.. .++
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~vd~~~~-----------------------~~~ 70 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG----------KVIFLKVDVDAV-----------------------AAV 70 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TSEEEEEETTTT-----------------------HHH
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC----------CeEEEEEECCch-----------------------HHH
Confidence 78999999999999999999999999988763 478999988754 678
Q ss_pred HHhcCcCceeeEEEECCCCcEEEc
Q 013684 316 TKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 316 ~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
++.|+|.++||++++ ++|+++.+
T Consensus 71 ~~~~~v~~~Pt~~~~-~~G~~~~~ 93 (112)
T 1ep7_A 71 AEAAGITAMPTFHVY-KDGVKADD 93 (112)
T ss_dssp HHHHTCCBSSEEEEE-ETTEEEEE
T ss_pred HHHcCCCcccEEEEE-ECCeEEEE
Confidence 899999999998887 89999876
No 271
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=1.6e-12 Score=108.68 Aligned_cols=75 Identities=17% Similarity=0.394 Sum_probs=62.9
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+||++||++|+.+.|.+.++++++++.. ..++.++.|+++.+ ..
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~------~~~~~~~~vd~~~~-----------------------~~ 74 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQT------KGKVKLAAVDATVN-----------------------QV 74 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHT------TTSEEEEEEETTTC-----------------------CH
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhc------CCcEEEEEEECCCC-----------------------HH
Confidence 47899999999999999999999999999997420 12588888888754 57
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++|+++++++ |+++.+
T Consensus 75 l~~~~~v~~~Pt~~~~~~-g~~~~~ 98 (133)
T 1x5d_A 75 LASRYGIRGFPTIKIFQK-GESPVD 98 (133)
T ss_dssp HHHHHTCCSSSEEEEEET-TEEEEE
T ss_pred HHHhCCCCeeCeEEEEeC-CCceEE
Confidence 889999999999999976 876655
No 272
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.41 E-value=6e-13 Score=114.85 Aligned_cols=89 Identities=11% Similarity=0.300 Sum_probs=71.9
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
++++++|+||++||++|+.+.|.+.+++++++ ++.++.|+++.. ..
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-----------~v~~~~vd~~~~-----------------------~~ 76 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-----------QVSFVKLEAEGV-----------------------PE 76 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTS-----------------------HH
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-----------CeEEEEEECCCC-----------------------HH
Confidence 48899999999999999999999999988863 578999988765 57
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEcccchhhhhccccCCCCCHHHHHHHHHHHHHHhcc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKN 373 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~i~~~~~~ 373 (438)
+++.|+|.++|++++++ +|+++.+. .|. .. ++|.+.|++.+..
T Consensus 77 l~~~~~v~~~Pt~~~~~-~G~~~~~~-------~G~-----~~---~~l~~~i~~~l~~ 119 (153)
T 2wz9_A 77 VSEKYEISSVPTFLFFK-NSQKIDRL-------DGA-----HA---PELTKKVQRHASS 119 (153)
T ss_dssp HHHHTTCCSSSEEEEEE-TTEEEEEE-------ESS-----CH---HHHHHHHHHHSCT
T ss_pred HHHHcCCCCCCEEEEEE-CCEEEEEE-------eCC-----CH---HHHHHHHHHHhcc
Confidence 88999999999999997 99998763 231 22 4566667766554
No 273
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.40 E-value=1.1e-12 Score=111.90 Aligned_cols=71 Identities=18% Similarity=0.269 Sum_probs=62.3
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+|||+||++|+.+.|.+.++++++++ ++.++.|++|.+ .+
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~----------~v~~~~vd~d~~-----------------------~~ 68 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN----------FAVIYLVDITEV-----------------------PD 68 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT----------TEEEEEEETTTC-----------------------CT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC----------CeEEEEEccccC-----------------------HH
Confidence 479999999999999999999999999999864 488999998855 45
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++||++++ ++|+++.+
T Consensus 69 ~~~~~~i~~~Pt~~~~-~~G~~v~~ 92 (142)
T 1qgv_A 69 FNKMYELYDPCTVMFF-FRNKHIMI 92 (142)
T ss_dssp TTTSSCSCSSCEEEEE-ETTEEEEE
T ss_pred HHHHcCCCCCCEEEEE-ECCcEEEE
Confidence 7889999999999999 68888764
No 274
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.40 E-value=1e-12 Score=111.56 Aligned_cols=71 Identities=17% Similarity=0.231 Sum_probs=63.4
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+||++||++|+.+.|.+.+++++++++ +.++.|++|.. ..
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~----------v~~~~vd~~~~-----------------------~~ 69 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS----------AVFGRINIATN-----------------------PW 69 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT----------SEEEEEETTTC-----------------------HH
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc----------eEEEEEECCcC-----------------------Hh
Confidence 4789999999999999999999999999998753 78999998765 57
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++||++++ ++|+++.+
T Consensus 70 l~~~~~v~~~Pt~~~~-~~G~~~~~ 93 (140)
T 3hz4_A 70 TAEKYGVQGTPTFKFF-CHGRPVWE 93 (140)
T ss_dssp HHHHHTCCEESEEEEE-ETTEEEEE
T ss_pred HHHHCCCCcCCEEEEE-eCCcEEEE
Confidence 8899999999999999 89998865
No 275
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.40 E-value=7.4e-13 Score=110.30 Aligned_cols=71 Identities=21% Similarity=0.396 Sum_probs=62.5
Q ss_pred cCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhH
Q 013684 234 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 313 (438)
Q Consensus 234 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 313 (438)
..+++++|+||++||++|+.+.|.|.+++++++ ++.++.|++|.+ .
T Consensus 35 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-----------~v~~~~vd~d~~-----------------------~ 80 (125)
T 1r26_A 35 SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-----------TVKFAKVDADNN-----------------------S 80 (125)
T ss_dssp HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------H
T ss_pred ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-----------CCEEEEEECCCC-----------------------H
Confidence 367899999999999999999999999988873 478999998765 5
Q ss_pred HHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 314 ELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 314 ~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
++++.|+|.++||++++ ++|+++.+
T Consensus 81 ~l~~~~~v~~~Pt~~i~-~~G~~~~~ 105 (125)
T 1r26_A 81 EIVSKCRVLQLPTFIIA-RSGKMLGH 105 (125)
T ss_dssp HHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHHcCCCcccEEEEE-eCCeEEEE
Confidence 78999999999998888 89998876
No 276
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.40 E-value=1.2e-12 Score=104.70 Aligned_cols=72 Identities=28% Similarity=0.581 Sum_probs=63.1
Q ss_pred cCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhH
Q 013684 234 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 313 (438)
Q Consensus 234 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 313 (438)
.++++++|+||++||++|+.+.|.+.++++++++ ++.++.|++|.+ .
T Consensus 18 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~v~~~~~-----------------------~ 64 (106)
T 1xwb_A 18 ASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD----------NVVVLKVDVDEC-----------------------E 64 (106)
T ss_dssp HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TEEEEEEETTTC-----------------------H
T ss_pred cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC----------CeEEEEEeccch-----------------------H
Confidence 4689999999999999999999999999888753 588999988754 5
Q ss_pred HHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 314 ELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 314 ~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.+++.|++.++|+++++ ++|+++.+
T Consensus 65 ~~~~~~~v~~~Pt~~~~-~~G~~~~~ 89 (106)
T 1xwb_A 65 DIAMEYNISSMPTFVFL-KNGVKVEE 89 (106)
T ss_dssp HHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHHcCCCcccEEEEE-cCCcEEEE
Confidence 68899999999998888 79998876
No 277
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.40 E-value=2.1e-14 Score=125.64 Aligned_cols=80 Identities=18% Similarity=0.368 Sum_probs=63.6
Q ss_pred eeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCccccc
Q 013684 228 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPF 307 (438)
Q Consensus 228 ~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~ 307 (438)
.+.....+||+++|+|||+||++|+.+.|.|.++.+.+... +.++.|++|.+.
T Consensus 38 ~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~----------~~~~~v~~d~~~----------------- 90 (164)
T 1sen_A 38 GKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELS----------HNFVMVNLEDEE----------------- 90 (164)
T ss_dssp HHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHH----------TTSEEEEEEGGG-----------------
T ss_pred HHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcC----------CeEEEEEecCCc-----------------
Confidence 56666678999999999999999999999999987665543 567888887542
Q ss_pred CCchhHHHHHhcCc--CceeeEEEECCCCcEEEc
Q 013684 308 GDPTIKELTKYFDV--QGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 308 ~~d~~~~l~~~~~v--~~~P~~~lid~~G~i~~~ 339 (438)
..+...|++ .++||++++|++|+++.+
T Consensus 91 -----~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~ 119 (164)
T 1sen_A 91 -----EPKDEDFSPDGGYIPRILFLDPSGKVHPE 119 (164)
T ss_dssp -----SCSCGGGCTTCSCSSEEEEECTTSCBCTT
T ss_pred -----hHHHHHhcccCCcCCeEEEECCCCCEEEE
Confidence 114556777 669999999999999876
No 278
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.40 E-value=4.6e-14 Score=119.03 Aligned_cols=97 Identities=14% Similarity=0.234 Sum_probs=74.1
Q ss_pred hhccchhHHHHHhhcccccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHH---HHHHHHHhcCCCCEEEEEEecC
Q 013684 39 IMSLSQWYVQQLRRRMTSTKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVL---VDVYEELRNNGSDFEVVFVSSD 115 (438)
Q Consensus 39 ~g~~~p~f~~~~~~~~~~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~iv~vs~D 115 (438)
+|..+|+|+ .+.+.++....+++.+||+++|+||++||++|+.+.|.+ .++++.++ ++.++.|+++
T Consensus 6 ~~~~~~~f~-------~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~----~~~~~~vd~~ 74 (134)
T 2fwh_A 6 QTQTHLNFT-------QIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA----DTVLLQANVT 74 (134)
T ss_dssp ----CCCCE-------ECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT----TSEEEEEECT
T ss_pred ccccCCCcE-------EecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc----CcEEEEEeCC
Confidence 455556655 234555555667777899999999999999999999998 88888874 3888888876
Q ss_pred CCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceEEEecCCCCCCCcc
Q 013684 116 EDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDAT 169 (438)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~ 169 (438)
... +....+++.|+|.++|+++++|+ +|+++
T Consensus 75 ~~~--------------------~~~~~l~~~~~v~~~Pt~~~~d~---~G~~v 105 (134)
T 2fwh_A 75 AND--------------------AQDVALLKHLNVLGLPTILFFDG---QGQEH 105 (134)
T ss_dssp TCC--------------------HHHHHHHHHTTCCSSSEEEEECT---TSCBC
T ss_pred CCc--------------------chHHHHHHHcCCCCCCEEEEECC---CCCEe
Confidence 431 12278999999999999999999 99987
No 279
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.39 E-value=1.2e-12 Score=108.07 Aligned_cols=70 Identities=26% Similarity=0.536 Sum_probs=61.6
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+||++||++|+.+.|.|.+++++++ ++.++.|++|.+ .+
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-----------~~~~~~vd~~~~-----------------------~~ 78 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFP-----------NAVFLKVDVDEL-----------------------KP 78 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------HH
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----------CcEEEEEECCCC-----------------------HH
Confidence 57899999999999999999999999888765 478898988765 57
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++||++++ ++|+++.+
T Consensus 79 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 102 (122)
T 2vlu_A 79 IAEQFSVEAMPTFLFM-KEGDVKDR 102 (122)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCcccEEEEE-eCCEEEEE
Confidence 8899999999998888 89999876
No 280
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.39 E-value=6.2e-13 Score=109.48 Aligned_cols=71 Identities=28% Similarity=0.464 Sum_probs=62.1
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.|++++|+||++||++|+.+.|.|.++++++ . ++.++.|+++.+ .+
T Consensus 22 ~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~----------~v~~~~vd~~~~-----------------------~~ 67 (118)
T 2f51_A 22 APGLVLVDFFATWCGPCQRLGQILPSIAEAN-K----------DVTFIKVDVDKN-----------------------GN 67 (118)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T----------TSEEEEEETTTC-----------------------HH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C----------CeEEEEEECCCC-----------------------HH
Confidence 4789999999999999999999999999887 2 578999998865 56
Q ss_pred HHHhcCcCceeeEEEECC---CCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGP---EGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~---~G~i~~~ 339 (438)
+++.|+|.++|++++++. +|+++.+
T Consensus 68 ~~~~~~i~~~Pt~~~~~~~~~~G~~~~~ 95 (118)
T 2f51_A 68 AADAYGVSSIPALFFVKKEGNEIKTLDQ 95 (118)
T ss_dssp HHHHTTCCSSSEEEEEEEETTEEEEEEE
T ss_pred HHHhcCCCCCCEEEEEeCCCCcceEEEe
Confidence 889999999999999965 3888876
No 281
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.38 E-value=1.9e-13 Score=120.09 Aligned_cols=119 Identities=16% Similarity=0.141 Sum_probs=93.7
Q ss_pred HhhccchhHHHHHhhcccccCCCC----------CEEecccc-CCCEE-EEEEeccCCccchh-hHHHHHHHHHHHhcCC
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIG----------EEVKVSDL-EGKVT-ALYFSANWYPPCGN-FTGVLVDVYEELRNNG 104 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g----------~~v~l~~~-~gk~v-ll~F~a~wC~~C~~-~~p~l~~l~~~~~~~~ 104 (438)
.+|+.+|+.+ +....+ +.++|+++ +||++ |++||+.|||+|.. ++|.|++.+++|++.|
T Consensus 11 ~~~~~~p~~~--------~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g 82 (176)
T 4f82_A 11 QVGDALPDAQ--------LFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAG 82 (176)
T ss_dssp CTTCBCCCCE--------EEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT
T ss_pred hcCCcCCceE--------EEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 4789999977 444433 67899997 99855 55777999999999 9999999999999987
Q ss_pred CCE-EEEEEecCCCHHHHHHhHhcCCcc--cccCCChHHHHHHhhhcCcC-----------ccceEEEecCCCCCCCccc
Q 013684 105 SDF-EVVFVSSDEDLNAFNNYRACMPWL--AVPYSDLETKKALNRKFDIE-----------GIPCLVVLQPYDDKDDATL 170 (438)
Q Consensus 105 ~~~-~iv~vs~D~~~~~~~~~~~~~~~~--~~~~~d~~~~~~l~~~~~v~-----------~~P~~~lvd~~~~~G~v~~ 170 (438)
+ +|++||+| +....++|.++.+.. ....+|.+ .++++.||+. ..|+++|| + +|+|++
T Consensus 83 --~d~VigIS~D-~~~~~~~f~~~~~l~~~f~lLsD~~--~~va~ayGv~~~~~~~G~g~~s~R~tfII-~---dG~I~~ 153 (176)
T 4f82_A 83 --IDEIWCVSVN-DAFVMGAWGRDLHTAGKVRMMADGS--AAFTHALGLTQDLSARGMGIRSLRYAMVI-D---GGVVKT 153 (176)
T ss_dssp --CCEEEEEESS-CHHHHHHHHHHTTCTTTSEEEECTT--CHHHHHHTCEEECGGGTCCEEECCEEEEE-E---TTEEEE
T ss_pred --CCEEEEEeCC-CHHHHHHHHHHhCCCCCceEEEcCc--hHHHHHhCCCccccccCCCcccccEEEEE-c---CCEEEE
Confidence 8 99999999 567788888877654 22233544 6888988873 25889999 8 999987
Q ss_pred ccc
Q 013684 171 HDG 173 (438)
Q Consensus 171 ~~~ 173 (438)
...
T Consensus 154 ~~~ 156 (176)
T 4f82_A 154 LAV 156 (176)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 282
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.38 E-value=1e-12 Score=108.72 Aligned_cols=73 Identities=23% Similarity=0.435 Sum_probs=61.7
Q ss_pred ccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchh
Q 013684 233 SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 312 (438)
Q Consensus 233 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~ 312 (438)
+.+||+++|+||++||++|+.+.|.+.+++++++ ++.++.|+++.+ .
T Consensus 34 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-----------~~~~~~vd~~~~----------------------~ 80 (124)
T 1faa_A 34 AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-----------DVIFLKLDCNQE----------------------N 80 (124)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEECSST----------------------T
T ss_pred hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-----------CCEEEEEecCcc----------------------h
Confidence 3468999999999999999999999999988765 468888888732 2
Q ss_pred HHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 313 KELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 313 ~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.++++.|+|.++||++++ ++|+++.+
T Consensus 81 ~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 106 (124)
T 1faa_A 81 KTLAKELGIRVVPTFKIL-KENSVVGE 106 (124)
T ss_dssp HHHHHHHCCSSSSEEEEE-ETTEEEEE
T ss_pred HHHHHHcCCCeeeEEEEE-eCCcEEEE
Confidence 678899999999997666 89999876
No 283
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.38 E-value=1.8e-12 Score=103.55 Aligned_cols=71 Identities=20% Similarity=0.438 Sum_probs=62.3
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+||++||++|+.+.|.+.++++++++ ++.++.|+++.+ ..
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 63 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG----------KIAVYKLNTDEA-----------------------PG 63 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC-----------------------HH
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC----------ceEEEEEcCcch-----------------------HH
Confidence 478999999999999999999999999988864 378888888755 56
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|++.++|+++++ ++|+++.+
T Consensus 64 ~~~~~~v~~~Pt~~~~-~~g~~~~~ 87 (105)
T 1fb6_A 64 IATQYNIRSIPTVLFF-KNGERKES 87 (105)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHhCCCCcccEEEEE-eCCeEEEE
Confidence 8899999999999888 79998876
No 284
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.38 E-value=1.6e-12 Score=104.45 Aligned_cols=71 Identities=24% Similarity=0.468 Sum_probs=63.1
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+||++||++|+.+.|.+.++.+++++ ++.++.|+++.+ .+
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 63 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG----------KLLVAKLDVDEN-----------------------PK 63 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT----------TBEEEEEETTTC-----------------------HH
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC----------ceEEEEEECCCC-----------------------Hh
Confidence 478999999999999999999999999988864 488999988765 56
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|++.++|+++++ ++|+++.+
T Consensus 64 ~~~~~~v~~~Pt~~~~-~~g~~~~~ 87 (109)
T 2yzu_A 64 TAMRYRVMSIPTVILF-KDGQPVEV 87 (109)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHhCCCCcCCEEEEE-eCCcEeee
Confidence 8899999999999999 89998875
No 285
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.38 E-value=7.5e-13 Score=109.39 Aligned_cols=72 Identities=21% Similarity=0.434 Sum_probs=63.9
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+||++||++|+.+.|.+.+++++++++ ++.++.|++|.. .+
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~---------~v~~~~vd~d~~-----------------------~~ 79 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD---------KVGFYKVDVDEQ-----------------------SQ 79 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH---------HSEEEEEETTTC-----------------------HH
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC---------cEEEEEEECcCC-----------------------HH
Confidence 5789999999999999999999999999888764 588999998865 56
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++||++++ ++|+++.+
T Consensus 80 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 103 (121)
T 2j23_A 80 IAQEVGIRAMPTFVFF-KNGQKIDT 103 (121)
T ss_dssp HHHHHTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCcccEEEEE-ECCeEEee
Confidence 8899999999999999 69998876
No 286
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.38 E-value=6.8e-13 Score=108.73 Aligned_cols=72 Identities=26% Similarity=0.506 Sum_probs=61.5
Q ss_pred cccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCch
Q 013684 232 SSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPT 311 (438)
Q Consensus 232 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~ 311 (438)
++.+|++++|+||++||++|+.+.|.+.++++++ ++.++.|++|..
T Consensus 29 ~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~------------~~~~~~vd~~~~---------------------- 74 (117)
T 2xc2_A 29 EQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY------------DAIFVKVDVDKL---------------------- 74 (117)
T ss_dssp HHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS------------SSEEEEEETTTS----------------------
T ss_pred HhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc------------CcEEEEEECCcc----------------------
Confidence 3447899999999999999999999999887765 267888888754
Q ss_pred hHHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 312 IKELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 312 ~~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.++++.|+|.++||++++ ++|+++.+
T Consensus 75 -~~~~~~~~v~~~Pt~~~~-~~G~~~~~ 100 (117)
T 2xc2_A 75 -EETARKYNISAMPTFIAI-KNGEKVGD 100 (117)
T ss_dssp -HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -HHHHHHcCCCccceEEEE-eCCcEEEE
Confidence 678899999999998888 89999876
No 287
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.08 E-value=3.9e-14 Score=118.50 Aligned_cols=83 Identities=25% Similarity=0.497 Sum_probs=67.7
Q ss_pred CCceeeccccCCCEEEEEEecCCChhhhhhhHHH---HHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCC
Q 013684 225 PDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 301 (438)
Q Consensus 225 g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 301 (438)
.+ .+.++..+||+++|+||++||++|+.+.|.+ .++.+.+++ ++.++.|+++.+.
T Consensus 9 ~~-~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~----------~~~~~~vd~~~~~----------- 66 (130)
T 2lst_A 9 PE-ALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA----------RFVVASVSVDTPE----------- 66 (130)
Confidence 44 6777788899999999999999999999999 888877764 3677777775332
Q ss_pred CcccccCCchhHHHHHhcCcCceeeEEEECC-CCcE--EEc
Q 013684 302 WLALPFGDPTIKELTKYFDVQGIPCLVIIGP-EGKT--VTK 339 (438)
Q Consensus 302 ~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~-~G~i--~~~ 339 (438)
...+++.|+|.++||++++|+ +|++ +.+
T Consensus 67 ----------~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~ 97 (130)
T 2lst_A 67 ----------GQELARRYRVPGTPTFVFLVPKAGAWEEVGR 97 (130)
Confidence 367889999999999999996 5888 655
No 288
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.38 E-value=6.4e-13 Score=109.63 Aligned_cols=69 Identities=19% Similarity=0.298 Sum_probs=60.6
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+||++||++|+.+.|.+.++++++++ ++.++.|+++.. .+
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~----------~~~~~~vd~~~~-----------------------~~ 66 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG----------KVRAGKVDCQAY-----------------------PQ 66 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT----------TCEEEEEETTTC-----------------------HH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC----------CeEEEEEeCcCC-----------------------HH
Confidence 468999999999999999999999999998874 488999988765 56
Q ss_pred HHHhcCcCceeeEEEECCCCcE
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKT 336 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i 336 (438)
+++.|+|.++||+++++++|++
T Consensus 67 ~~~~~~v~~~Pt~~~~~~~~~~ 88 (122)
T 3aps_A 67 TCQKAGIKAYPSVKLYQYERAK 88 (122)
T ss_dssp HHHHTTCCSSSEEEEEEEEGGG
T ss_pred HHHHcCCCccceEEEEeCCCcc
Confidence 8899999999999999877763
No 289
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.37 E-value=5.7e-13 Score=121.24 Aligned_cols=89 Identities=17% Similarity=0.234 Sum_probs=72.9
Q ss_pred CCCCcc-CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHH
Q 013684 216 DRGYLL-GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFE 294 (438)
Q Consensus 216 ~~~f~l-~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~ 294 (438)
.++..+ +.++. .+......|++++|+||++||++|+.+.|.+.++++++++ ++.++.|+++..
T Consensus 94 ~~~~~v~~l~~~-~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~----------~v~~~~vd~~~~----- 157 (210)
T 3apq_A 94 DDDPEIITLERR-EFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG----------LLRIGAVNCGDD----- 157 (210)
T ss_dssp TTCTTSEECCHH-HHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT----------TBEEEEEETTTC-----
T ss_pred CCCCceEEecHH-HHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC----------ceEEEEEECCcc-----
Confidence 344455 66666 5554446789999999999999999999999999998864 388999988765
Q ss_pred HHHhcCCCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 295 SYFGTMPWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 295 ~~~~~~~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
..+++.|+|.++||++++ ++|+++.+
T Consensus 158 ------------------~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 183 (210)
T 3apq_A 158 ------------------RMLCRMKGVNSYPSLFIF-RSGMAAVK 183 (210)
T ss_dssp ------------------HHHHHHTTCCSSSEEEEE-CTTSCCEE
T ss_pred ------------------HHHHHHcCCCcCCeEEEE-ECCCceeE
Confidence 578899999999999999 89988665
No 290
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.37 E-value=1.5e-12 Score=106.52 Aligned_cols=70 Identities=26% Similarity=0.528 Sum_probs=61.6
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
+||+++|+||++||++|+.+.|.|.+++++++ ++.++.|++|.+ .+
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~-----------~v~~~~vd~~~~-----------------------~~ 74 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYP-----------DVRFVKCDVDES-----------------------PD 74 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------HH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-----------CCEEEEEECCCC-----------------------HH
Confidence 57899999999999999999999999888764 378899988755 56
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++|+++++ ++|+++.+
T Consensus 75 l~~~~~v~~~Pt~~~~-~~G~~~~~ 98 (114)
T 2oe3_A 75 IAKECEVTAMPTFVLG-KDGQLIGK 98 (114)
T ss_dssp HHHHTTCCSBSEEEEE-ETTEEEEE
T ss_pred HHHHCCCCcccEEEEE-eCCeEEEE
Confidence 8899999999999888 89999876
No 291
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.37 E-value=3e-12 Score=101.75 Aligned_cols=70 Identities=17% Similarity=0.458 Sum_probs=61.9
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
++++++|+||++||++|+.+.|.+.+++++++ ++.++.|++|.+ .+
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-----------~~~~~~v~~~~~-----------------------~~ 60 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYP-----------QVGFGKLNSDEN-----------------------PD 60 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------HH
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcC-----------CceEEEEECCCC-----------------------HH
Confidence 57899999999999999999999999887764 378999988765 56
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|++.++|+++++ ++|+++.+
T Consensus 61 ~~~~~~v~~~Pt~~~~-~~g~~~~~ 84 (104)
T 2e0q_A 61 IAARYGVMSLPTVIFF-KDGEPVDE 84 (104)
T ss_dssp HHHHTTCCSSCEEEEE-ETTEEEEE
T ss_pred HHHhCCccccCEEEEE-ECCeEhhh
Confidence 8899999999999999 89998875
No 292
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.37 E-value=1.1e-11 Score=126.96 Aligned_cols=67 Identities=13% Similarity=0.263 Sum_probs=57.2
Q ss_pred CCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCc
Q 013684 71 GKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDI 150 (438)
Q Consensus 71 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v 150 (438)
+++++|+|||+||++|+.+.|.|.++++++++. +.++.|+.+.. ..+++.|+|
T Consensus 21 ~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~---v~~~~vd~~~~------------------------~~l~~~~~v 73 (481)
T 3f8u_A 21 AGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI---VPLAKVDCTAN------------------------TNTCNKYGV 73 (481)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CCEEEEETTTC------------------------HHHHHHTTC
T ss_pred CCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc---eEEEEEECCCC------------------------HHHHHhcCC
Confidence 489999999999999999999999999998754 66777766543 688999999
Q ss_pred CccceEEEecCCCCCCCc
Q 013684 151 EGIPCLVVLQPYDDKDDA 168 (438)
Q Consensus 151 ~~~P~~~lvd~~~~~G~v 168 (438)
.++||++++. +|+.
T Consensus 74 ~~~Ptl~~~~----~g~~ 87 (481)
T 3f8u_A 74 SGYPTLKIFR----DGEE 87 (481)
T ss_dssp CEESEEEEEE----TTEE
T ss_pred CCCCEEEEEe----CCce
Confidence 9999999996 6643
No 293
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.37 E-value=1.6e-12 Score=103.68 Aligned_cols=71 Identities=30% Similarity=0.631 Sum_probs=61.8
Q ss_pred cCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhH
Q 013684 234 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 313 (438)
Q Consensus 234 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 313 (438)
..|++++|+||++||++|+.+.|.+.+++++++ ++.++.|+++.. .
T Consensus 17 ~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-----------~~~~~~v~~~~~-----------------------~ 62 (104)
T 2vim_A 17 NKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-----------EVEFAKVDVDQN-----------------------E 62 (104)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTC-----------------------H
T ss_pred cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-----------CCEEEEEeccCC-----------------------H
Confidence 468899999999999999999999999888764 478999988754 5
Q ss_pred HHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 314 ELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 314 ~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.+++.|++.++|+++++ ++|+++.+
T Consensus 63 ~~~~~~~v~~~Pt~~~~-~~g~~~~~ 87 (104)
T 2vim_A 63 EAAAKYSVTAMPTFVFI-KDGKEVDR 87 (104)
T ss_dssp HHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHHcCCccccEEEEE-eCCcEEEE
Confidence 68899999999998888 59998876
No 294
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.36 E-value=1.7e-12 Score=105.52 Aligned_cols=70 Identities=21% Similarity=0.417 Sum_probs=61.3
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.|++++|+||++||++|+.+.|.+.+++++++ ++.++.|+++.. ..
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-----------~v~~~~vd~~~~-----------------------~~ 70 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-----------KMVFIKVDVDEV-----------------------SE 70 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTT-----------------------HH
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-----------CCEEEEEECCCC-----------------------HH
Confidence 57999999999999999999999999988764 478999988755 56
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++|+++++ ++|+++.+
T Consensus 71 ~~~~~~v~~~Pt~~~~-~~G~~~~~ 94 (112)
T 1syr_A 71 VTEKENITSMPTFKVY-KNGSSVDT 94 (112)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCcccEEEEE-ECCcEEEE
Confidence 8899999999998888 79998876
No 295
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.36 E-value=2.1e-12 Score=104.76 Aligned_cols=71 Identities=25% Similarity=0.548 Sum_probs=62.2
Q ss_pred cCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhH
Q 013684 234 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 313 (438)
Q Consensus 234 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 313 (438)
..|++++|+||++||++|+.+.|.+.++.++++ ++.++.|++|.. .
T Consensus 24 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-----------~v~~~~v~~~~~-----------------------~ 69 (113)
T 1ti3_A 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-----------NVTFLKVDVDEL-----------------------K 69 (113)
T ss_dssp TSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-----------SEEEEEEETTTC-----------------------H
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-----------CcEEEEEEcccc-----------------------H
Confidence 358899999999999999999999999887764 588999988755 5
Q ss_pred HHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 314 ELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 314 ~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.+++.|++.++|+++++ ++|+++.+
T Consensus 70 ~~~~~~~v~~~Pt~~~~-~~G~~~~~ 94 (113)
T 1ti3_A 70 AVAEEWNVEAMPTFIFL-KDGKLVDK 94 (113)
T ss_dssp HHHHHHHCSSTTEEEEE-ETTEEEEE
T ss_pred HHHHhCCCCcccEEEEE-eCCEEEEE
Confidence 68899999999999999 79999876
No 296
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.36 E-value=4.9e-12 Score=107.14 Aligned_cols=83 Identities=23% Similarity=0.368 Sum_probs=61.6
Q ss_pred CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCC
Q 013684 222 GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 301 (438)
Q Consensus 222 ~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 301 (438)
..+++ .+...-..++.++|+||++||++|+.+.|.|.++++++++ ++.++.|+++.+
T Consensus 37 ~l~~~-~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~----------~v~~~~vd~~~~------------ 93 (140)
T 1v98_A 37 EADEK-GFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAG----------RLKVVKVNVDEH------------ 93 (140)
T ss_dssp -------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TEEEEEEETTTC------------
T ss_pred cCCHH-HHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccC----------ceEEEEEECCCC------------
Confidence 44444 4443323343499999999999999999999999988864 488999998865
Q ss_pred CcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 302 WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 302 ~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
..+++.|+|.++||++++ ++|+++.+
T Consensus 94 -----------~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 119 (140)
T 1v98_A 94 -----------PGLAARYGVRSVPTLVLF-RRGAPVAT 119 (140)
T ss_dssp -----------HHHHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred -----------HHHHHHCCCCccCEEEEE-eCCcEEEE
Confidence 568899999999999999 89998875
No 297
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.36 E-value=1.4e-12 Score=107.23 Aligned_cols=71 Identities=31% Similarity=0.572 Sum_probs=62.6
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+||++||++|+.+.|.+.++++++++ ++.++.|+++.+ ..
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~----------~~~~~~v~~~~~-----------------------~~ 75 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERAT----------DLTVAKLDVDTN-----------------------PE 75 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT----------TCEEEEEETTTC-----------------------HH
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC----------CeEEEEEECCCC-----------------------HH
Confidence 478999999999999999999999999988764 488999998765 56
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++|+++++ ++|+++.+
T Consensus 76 ~~~~~~i~~~Pt~~~~-~~g~~~~~ 99 (121)
T 2i1u_A 76 TARNFQVVSIPTLILF-KDGQPVKR 99 (121)
T ss_dssp HHHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHhcCCCcCCEEEEE-ECCEEEEE
Confidence 8899999999999998 69998876
No 298
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.36 E-value=2.3e-12 Score=104.07 Aligned_cols=73 Identities=22% Similarity=0.455 Sum_probs=62.4
Q ss_pred CCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHH
Q 013684 236 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 315 (438)
Q Consensus 236 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 315 (438)
+++++|+||++||++|+.+.|.+.++++++... ..++.++.|+++.+ .++
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-------~~~~~~~~vd~~~~-----------------------~~l 70 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPG-------LAGVKIAEVDCTAE-----------------------RNI 70 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC--------CCEEEEEEETTTC-----------------------HHH
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhcc-------CCceEEEEEecccc-----------------------HhH
Confidence 789999999999999999999999998876532 24688888888755 568
Q ss_pred HHhcCcCceeeEEEECCCCcEEEc
Q 013684 316 TKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 316 ~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
++.|+|.++||++++ ++|+++.+
T Consensus 71 ~~~~~v~~~Pt~~~~-~~g~~~~~ 93 (111)
T 3uvt_A 71 CSKYSVRGYPTLLLF-RGGKKVSE 93 (111)
T ss_dssp HHHTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHhcCCCcccEEEEE-eCCcEEEe
Confidence 999999999999999 88988765
No 299
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.35 E-value=7.9e-12 Score=122.78 Aligned_cols=164 Identities=16% Similarity=0.156 Sum_probs=104.1
Q ss_pred CCCEEEEEEeccCCccchhhHHH-------HHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHH
Q 013684 70 EGKVTALYFSANWYPPCGNFTGV-------LVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKK 142 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~-------l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~ 142 (438)
.+++++|+|||+||+ |+.+.|. +.++++.+++.+ +.++.|+.+.. .
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~--v~~~~Vd~~~~------------------------~ 79 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKD--IGFVMVDAKKE------------------------A 79 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSS--EEEEEEETTTT------------------------H
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcC--cEEEEEeCCCC------------------------H
Confidence 478999999999999 9999999 888888887654 88887776643 6
Q ss_pred HHhhhcCcCccceEEEecCCCCCCCcccccchhHHhhhCCCCccCChhHHHHHHHHHHhhhhHHHHHhhhhcCCCCCccC
Q 013684 143 ALNRKFDIEGIPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRGYLLG 222 (438)
Q Consensus 143 ~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~~~~i~~~~~~a~p~~~e~l~~L~~~~~~~~~~~~~~~~~g~~~~~f~l~ 222 (438)
.+++.|+|.++||++++. +|++.... |. ...+.+..... . ..+ |... .
T Consensus 80 ~l~~~~~v~~~Pt~~~~~----~g~~~~~~--------G~----~~~~~l~~~i~---~---------~~~---~~~~-~ 127 (350)
T 1sji_A 80 KLAKKLGFDEEGSLYVLK----GDRTIEFD--------GE----FAADVLVEFLL---D---------LIE---DPVE-I 127 (350)
T ss_dssp HHHHHHTCCSTTEEEEEE----TTEEEEEC--------SC----CCHHHHHHHHH---T---------TSS---CSEE-E
T ss_pred HHHHhcCCCccceEEEEE----CCcEEEec--------CC----CCHHHHHHHHH---H---------hcC---Ccce-e
Confidence 789999999999999995 77633111 11 12222221111 0 111 1111 1
Q ss_pred CCCCceee-ccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCC
Q 013684 223 HPPDEKVP-VSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 301 (438)
Q Consensus 223 ~~g~~~~~-l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 301 (438)
.+..+.+. +-+...+.++|.|+++||. ...+.+.++++.+++. +.+..++ +
T Consensus 128 l~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~~~~~A~~~~~~----------~~f~~~~---~------------ 179 (350)
T 1sji_A 128 INSKLEVQAFERIEDQIKLIGFFKSEES---EYYKAFEEAAEHFQPY----------IKFFATF---D------------ 179 (350)
T ss_dssp CCSHHHHHHHHHCCSSCEEEEECSCTTS---HHHHHHHHHHHHTTTT----------SEEEEEC---C------------
T ss_pred ccchHHHHHHhccCCCcEEEEEECCCCc---HHHHHHHHHHHhhccC----------cEEEEEC---C------------
Confidence 11100110 0001234678889988864 4457788888887654 4444431 2
Q ss_pred CcccccCCchhHHHHHhcCcCceeeEEEECC
Q 013684 302 WLALPFGDPTIKELTKYFDVQGIPCLVIIGP 332 (438)
Q Consensus 302 ~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~ 332 (438)
..+++.|++. .|+++++.+
T Consensus 180 -----------~~~~~~~~v~-~p~i~~~~~ 198 (350)
T 1sji_A 180 -----------KGVAKKLSLK-MNEVDFYEP 198 (350)
T ss_dssp -----------HHHHHHHTCC-TTCEEEECT
T ss_pred -----------HHHHHHcCCC-CCcEEEEeC
Confidence 4588899999 999999966
No 300
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.35 E-value=3.8e-12 Score=122.23 Aligned_cols=67 Identities=28% Similarity=0.520 Sum_probs=59.0
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+++++|+|||+||++|+.+.|.|.++++++++. +.++.|++|.+.. ..+++.|+
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~---~~~~~v~~d~~~~----------------------~~l~~~~~ 88 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV---VQVAAVNCDLNKN----------------------KALCAKYD 88 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---SEEEEEETTSTTT----------------------HHHHHHTT
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC---cEEEEEEccCccC----------------------HHHHHhCC
Confidence 4789999999999999999999999999998653 8889998885432 78999999
Q ss_pred cCccceEEEecC
Q 013684 150 IEGIPCLVVLQP 161 (438)
Q Consensus 150 v~~~P~~~lvd~ 161 (438)
|.++|++++++.
T Consensus 89 I~~~Pt~~~~~~ 100 (298)
T 3ed3_A 89 VNGFPTLMVFRP 100 (298)
T ss_dssp CCBSSEEEEEEC
T ss_pred CCccceEEEEEC
Confidence 999999999984
No 301
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.35 E-value=2.9e-12 Score=104.76 Aligned_cols=70 Identities=27% Similarity=0.559 Sum_probs=61.5
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.|++++|+||++||++|+.+.|.+.++.++++ ++.++.|++|.. ..
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-----------~~~~~~v~~~~~-----------------------~~ 72 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-----------GAIFLKVDVDEL-----------------------KD 72 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-----------TSEEEEEETTTS-----------------------HH
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-----------CcEEEEEEcccC-----------------------HH
Confidence 47899999999999999999999999988765 478888888754 67
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|++.++|+++++ ++|+++.+
T Consensus 73 ~~~~~~v~~~Pt~~~~-~~g~~~~~ 96 (118)
T 2vm1_A 73 VAEAYNVEAMPTFLFI-KDGEKVDS 96 (118)
T ss_dssp HHHHTTCCSBSEEEEE-ETTEEEEE
T ss_pred HHHHcCCCcCcEEEEE-eCCeEEEE
Confidence 8899999999999998 89998876
No 302
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.34 E-value=7.2e-13 Score=116.06 Aligned_cols=77 Identities=17% Similarity=0.160 Sum_probs=62.8
Q ss_pred eccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHH
Q 013684 65 KVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKAL 144 (438)
Q Consensus 65 ~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l 144 (438)
.+++++||+++|+|||+|||+|+.+.|.|.++++++. ++.++.|++|.. .++
T Consensus 48 ~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~----~v~~~~v~~d~~------------------------~~~ 99 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP----NIELAIISKGRA------------------------EDD 99 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT----TEEEEEECHHHH------------------------HHH
T ss_pred HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CcEEEEEECCCC------------------------HHH
Confidence 4667789999999999999999999999999998752 488888876633 455
Q ss_pred hhhcC---cCccceEEEecCCCCCCCccccc
Q 013684 145 NRKFD---IEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 145 ~~~~~---v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
...|. +.++||+++++. +|+++.+.
T Consensus 100 ~~~~~~~~v~~iPt~i~~~~---~G~~~~~~ 127 (167)
T 1z6n_A 100 LRQRLALERIAIPLVLVLDE---EFNLLGRF 127 (167)
T ss_dssp TTTTTTCSSCCSSEEEEECT---TCCEEEEE
T ss_pred HHHHHHcCCCCcCeEEEECC---CCCEEEEE
Confidence 56665 999999999998 88876543
No 303
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.34 E-value=1.2e-12 Score=109.73 Aligned_cols=78 Identities=26% Similarity=0.398 Sum_probs=65.9
Q ss_pred cCCCEEEEEEeccCCccchhhHHHHH--HHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhh
Q 013684 69 LEGKVTALYFSANWYPPCGNFTGVLV--DVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 146 (438)
Q Consensus 69 ~~gk~vll~F~a~wC~~C~~~~p~l~--~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 146 (438)
.+||+++|+||++||++|+.+.|.|. ++.+.+++. +.++.|+++.. +. ...+++
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~---~~~~~vd~~~~-------------------~~--~~~l~~ 82 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKH---FEVVKIDVGNF-------------------DR--NLELSQ 82 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHH---CEEEEEECTTT-------------------TS--SHHHHH
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCC---EEEEEEeCCcc-------------------cc--hHHHHH
Confidence 46899999999999999999999999 999988653 88888888421 11 168899
Q ss_pred hcCc---CccceEEEecCCCCCCCcccccc
Q 013684 147 KFDI---EGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 147 ~~~v---~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
.|+| .++|+++++|+ +|+++.+..
T Consensus 83 ~~~v~~~~~~Pt~~~~d~---~G~~~~~~~ 109 (133)
T 3fk8_A 83 AYGDPIQDGIPAVVVVNS---DGKVRYTTK 109 (133)
T ss_dssp HTTCGGGGCSSEEEEECT---TSCEEEECC
T ss_pred HhCCccCCccceEEEECC---CCCEEEEec
Confidence 9999 99999999999 999987654
No 304
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.34 E-value=1.1e-12 Score=111.91 Aligned_cols=69 Identities=13% Similarity=0.346 Sum_probs=59.8
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+++|+|.|||+||+||+.+.|.|.++++++.+. +.++.|++|+. .+++..|+
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~---v~f~kVDVDe~------------------------~e~a~~y~ 92 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF---CVIYLVDITEV------------------------PDFNTMYE 92 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT---EEEEEEETTTC------------------------CTTTTTTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC---cEEEEEECCCC------------------------HHHHHHcC
Confidence 3589999999999999999999999999998653 88888888855 56789999
Q ss_pred cCccceEEEecCCCCCCCcc
Q 013684 150 IEGIPCLVVLQPYDDKDDAT 169 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~ 169 (438)
|..+||++++. +|+.+
T Consensus 93 V~siPT~~fFk----~G~~v 108 (160)
T 2av4_A 93 LYDPVSVMFFY----RNKHM 108 (160)
T ss_dssp CCSSEEEEEEE----TTEEE
T ss_pred CCCCCEEEEEE----CCEEE
Confidence 99999999887 66665
No 305
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.33 E-value=2e-12 Score=123.18 Aligned_cols=72 Identities=19% Similarity=0.374 Sum_probs=64.5
Q ss_pred cCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhH
Q 013684 234 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 313 (438)
Q Consensus 234 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 313 (438)
-+||+|+|+||++||++|+.+.|.+.++++++++ ++.++.|++|.+ .
T Consensus 24 ~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~----------~~~~~~vd~~~~-----------------------~ 70 (287)
T 3qou_A 24 SMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG----------QFILAKLDCDAE-----------------------Q 70 (287)
T ss_dssp TTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS----------SSEEEEEETTTC-----------------------H
T ss_pred cCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC----------CeEEEEEeCccC-----------------------H
Confidence 3589999999999999999999999999999874 388999998865 5
Q ss_pred HHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 314 ELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 314 ~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.+++.|+|.++||++++ ++|+++.+
T Consensus 71 ~~~~~~~v~~~Pt~~~~-~~G~~~~~ 95 (287)
T 3qou_A 71 MIAAQFGLRAIPTVYLF-QNGQPVDG 95 (287)
T ss_dssp HHHHTTTCCSSSEEEEE-ETTEEEEE
T ss_pred HHHHHcCCCCCCeEEEE-ECCEEEEE
Confidence 78999999999999999 89998875
No 306
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.33 E-value=2.6e-13 Score=117.32 Aligned_cols=93 Identities=16% Similarity=0.312 Sum_probs=71.4
Q ss_pred CCCEEeccccCCCEEEEEEe-ccCCccchhhHHHH---HHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccC
Q 013684 60 IGEEVKVSDLEGKVTALYFS-ANWYPPCGNFTGVL---VDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPY 135 (438)
Q Consensus 60 ~g~~v~l~~~~gk~vll~F~-a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~ 135 (438)
.|+.+.++..+||+++|+|| ++||++|+.+.|.| .++.+.+.. ++.++.|+.+.... +++
T Consensus 36 ~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~---~~~~v~vd~~~~~~-------------~~~ 99 (154)
T 2ju5_A 36 YAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV---HLHMVEVDFPQKNH-------------QPE 99 (154)
T ss_dssp HHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH---HCEEEEEECCSSCC-------------CCH
T ss_pred HHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC---cEEEEEecCccccC-------------CCh
Confidence 34556677778999999999 99999999999999 677655533 38888888775531 111
Q ss_pred CChHHHHHHhhhcCcCccceEEEecCCCCCCCcccc
Q 013684 136 SDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 136 ~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
...+....+++.|+|.++|+++++|+ +|+++.+
T Consensus 100 ~~~~~~~~l~~~~~v~~~Pt~~~~d~---~G~~~~~ 132 (154)
T 2ju5_A 100 EQRQKNQELKAQYKVTGFPELVFIDA---EGKQLAR 132 (154)
T ss_dssp HHHHHHHHHHHHTTCCSSSEEEEECT---TCCEEEE
T ss_pred hhHhhHHHHHHHcCCCCCCEEEEEcC---CCCEEEE
Confidence 12233478999999999999999999 9998865
No 307
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.33 E-value=2e-12 Score=106.37 Aligned_cols=83 Identities=17% Similarity=0.252 Sum_probs=62.7
Q ss_pred CCCCCceeecc-ccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcC
Q 013684 222 GHPPDEKVPVS-SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTM 300 (438)
Q Consensus 222 ~~~g~~~~~l~-~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 300 (438)
+++++ .+... ..++++++|+||++||++|+.+.|.|.++++++++. ....++.++.|+++...
T Consensus 11 ~l~~~-~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-----~~~~~v~~~~vd~~~~~---------- 74 (121)
T 2djj_A 11 VVVAK-NYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKS-----EFKDRVVIAKVDATAND---------- 74 (121)
T ss_dssp ECCTT-TTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTS-----SCTTSSEEEEEETTTSC----------
T ss_pred Eeccc-CHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhc-----ccCCceEEEEEECcccc----------
Confidence 55666 55443 246899999999999999999999999999999751 00025788888877431
Q ss_pred CCcccccCCchhHHHHHhcCcCceeeEEEECCCCcE
Q 013684 301 PWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 336 (438)
Q Consensus 301 ~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i 336 (438)
+++ +|.++||+++++++|++
T Consensus 75 --------------~~~--~v~~~Pt~~~~~~~~~~ 94 (121)
T 2djj_A 75 --------------VPD--EIQGFPTIKLYPAGAKG 94 (121)
T ss_dssp --------------CSS--CCSSSSEEEEECSSCTT
T ss_pred --------------ccc--ccCcCCeEEEEeCcCCC
Confidence 222 99999999999888773
No 308
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.32 E-value=3.5e-12 Score=117.10 Aligned_cols=104 Identities=17% Similarity=0.351 Sum_probs=78.0
Q ss_pred CCCCCceeecc-ccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcC
Q 013684 222 GHPPDEKVPVS-SLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTM 300 (438)
Q Consensus 222 ~~~g~~~~~l~-~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 300 (438)
.++.+ .+.-. .-++|+++|+||++||++|+.+.|.|.+++++++++ +.++.|++|..
T Consensus 16 ~lt~~-~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~----------v~~~~vd~d~~----------- 73 (222)
T 3dxb_A 16 HLTDD-SFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK----------LTVAKLNIDQN----------- 73 (222)
T ss_dssp ECCTT-THHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT----------CEEEEEETTTC-----------
T ss_pred eCCHH-HHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC----------cEEEEEECCCC-----------
Confidence 44555 44321 225799999999999999999999999999998753 88999998865
Q ss_pred CCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEcccchhhhhccccCCCCCHHHHHHHHHHHHHHhccC
Q 013684 301 PWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL 374 (438)
Q Consensus 301 ~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~i~~~~~~~ 374 (438)
..+++.|+|.++||++++ ++|+++.+. .|. .+ .++|.+.|++.++..
T Consensus 74 ------------~~l~~~~~v~~~Pt~~~~-~~G~~~~~~-------~G~----~~---~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 74 ------------PGTAPKYGIRGIPTLLLF-KNGEVAATK-------VGA----LS---KGQLKEFLDANLAGS 120 (222)
T ss_dssp ------------TTTGGGGTCCSBSEEEEE-ETTEEEEEE-------ESC----CC---HHHHHHHHHHHSCCS
T ss_pred ------------HHHHHHcCCCcCCEEEEE-ECCeEEEEe-------ccc----cC---hHHHHHHHHhhcccc
Confidence 457889999999999999 689888763 232 12 355666676666543
No 309
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.32 E-value=3.2e-12 Score=103.67 Aligned_cols=70 Identities=20% Similarity=0.324 Sum_probs=61.0
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+||++||++|+.+.|.+.++.+++. ++.++.|+++.. .+
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-----------~v~~~~vd~~~~-----------------------~~ 63 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-----------QVAISSVDSEAR-----------------------PE 63 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-----------TSCEEEEEGGGC-----------------------HH
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-----------CcEEEEEcCcCC-----------------------HH
Confidence 46899999999999999999999998877654 467888887654 67
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++||++++ ++|+++.+
T Consensus 64 l~~~~~v~~~Pt~~~~-~~G~~v~~ 87 (110)
T 2l6c_A 64 LMKELGFERVPTLVFI-RDGKVAKV 87 (110)
T ss_dssp HHHHTTCCSSCEEEEE-ESSSEEEE
T ss_pred HHHHcCCcccCEEEEE-ECCEEEEE
Confidence 8899999999999999 99999876
No 310
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.31 E-value=2.7e-12 Score=105.70 Aligned_cols=67 Identities=12% Similarity=0.082 Sum_probs=57.7
Q ss_pred CCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHH
Q 013684 236 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 315 (438)
Q Consensus 236 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 315 (438)
+++|+|+|||+||++|+.+.|.|.+++++|. ++.++.|++|..
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-----------~v~f~kvd~d~~-------------------------- 65 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-----------ETKFVKAIVNSC-------------------------- 65 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-----------TSEEEEEEGGGT--------------------------
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-----------CCEEEEEEhHHh--------------------------
Confidence 4599999999999999999999999998875 467888877632
Q ss_pred HHhcCcCceeeEEEECCCCcEEEcc
Q 013684 316 TKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 316 ~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
.+.|+|.++||++++ ++|+.+.+.
T Consensus 66 ~~~~~v~~~PT~~~f-k~G~~v~~~ 89 (118)
T 3evi_A 66 IQHYHDNCLPTIFVY-KNGQIEAKF 89 (118)
T ss_dssp STTCCGGGCSEEEEE-ETTEEEEEE
T ss_pred HHHCCCCCCCEEEEE-ECCEEEEEE
Confidence 367999999999999 899999873
No 311
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.31 E-value=1.2e-12 Score=108.62 Aligned_cols=71 Identities=23% Similarity=0.509 Sum_probs=58.2
Q ss_pred CCCEEEEEEecCCCh--------------hhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcC
Q 013684 235 VGKTVGLYFSARWCI--------------PCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTM 300 (438)
Q Consensus 235 ~gk~vll~F~a~wC~--------------~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 300 (438)
.||+++|+||++||+ +|+.+.|.+.+++++++++ +.++.|++|.+
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~----------~~~~~vd~d~~----------- 78 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK----------LTVAKLNIDQN----------- 78 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-----------------CEEEEEETTSC-----------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC----------eEEEEEECCCC-----------
Confidence 579999999999999 9999999999999888753 78888888765
Q ss_pred CCcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 301 PWLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 301 ~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.++++.|+|.++||++++ ++|+++.+
T Consensus 79 ------------~~l~~~~~v~~~Pt~~~~-~~G~~~~~ 104 (123)
T 1oaz_A 79 ------------PGTAPKYGIRGIPTLLLF-KNGEVAAT 104 (123)
T ss_dssp ------------TTTGGGGTCCBSSEEEEE-ESSSEEEE
T ss_pred ------------HHHHHHcCCCccCEEEEE-ECCEEEEE
Confidence 567899999999999999 99999876
No 312
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.30 E-value=1.5e-12 Score=109.00 Aligned_cols=83 Identities=14% Similarity=0.339 Sum_probs=64.4
Q ss_pred CCCCCEEecccc-CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCC
Q 013684 58 KEIGEEVKVSDL-EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYS 136 (438)
Q Consensus 58 ~~~g~~v~l~~~-~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~ 136 (438)
+++++.+..... .+++++|+||++||++|+.+.|.|.+++++++..+ ++.++.|+.+..
T Consensus 11 ~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~-~~~~~~vd~~~~------------------- 70 (133)
T 2dj3_A 11 VVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQK-DLVIAKMDATAN------------------- 70 (133)
T ss_dssp ECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSS-SEEEEEECTTTS-------------------
T ss_pred EEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCC-CEEEEEecCCcC-------------------
Confidence 566665554443 48999999999999999999999999999997642 477777765533
Q ss_pred ChHHHHHHhhhcCcCccceEEEecCCCCCCCc
Q 013684 137 DLETKKALNRKFDIEGIPCLVVLQPYDDKDDA 168 (438)
Q Consensus 137 d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v 168 (438)
..+++.|+|.++|++++++. +|.+
T Consensus 71 -----~~~~~~~~v~~~Pt~~~~~~---g~~~ 94 (133)
T 2dj3_A 71 -----DITNDQYKVEGFPTIYFAPS---GDKK 94 (133)
T ss_dssp -----CCCCSSCCCSSSSEEEEECT---TCTT
T ss_pred -----HHHHhhcCCCcCCEEEEEeC---CCcc
Confidence 23456799999999999986 5543
No 313
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.30 E-value=5.7e-12 Score=103.41 Aligned_cols=75 Identities=16% Similarity=0.397 Sum_probs=60.4
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.|++++|+||++|||+|+.+.|.+.+++++++ ..++.++++...+ .+....
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~------------~~v~~~~~~~~~~-----------------~~~~~~ 78 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETK------------AHIYFINSEEPSQ-----------------LNDLQA 78 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC------------CCCEEEETTCGGG-----------------HHHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcC------------CeEEEEECCCcCc-----------------HHHHHH
Confidence 47899999999999999999999999988764 2467777764321 012367
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|+|.++||++++ ++|+++.+
T Consensus 79 ~~~~~~i~~~Pt~~~~-~~G~~~~~ 102 (118)
T 1zma_A 79 FRSRYGIPTVPGFVHI-TDGQINVR 102 (118)
T ss_dssp HHHHHTCCSSCEEEEE-ETTEEEEE
T ss_pred HHHHcCCCCCCeEEEE-ECCEEEEE
Confidence 8899999999999999 68988866
No 314
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.30 E-value=5.3e-12 Score=107.55 Aligned_cols=71 Identities=18% Similarity=0.390 Sum_probs=60.7
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+++|+|+|||+||++|+.+.|.|.++++++++ ++.++.|++|.. .++++.|+
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---~v~~~~vd~d~~------------------------~~~~~~~~ 74 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN---FAVIYLVDITEV------------------------PDFNKMYE 74 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT---TEEEEEEETTTC------------------------CTTTTSSC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC---CeEEEEEccccC------------------------HHHHHHcC
Confidence 479999999999999999999999999999854 388888888754 34678899
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
|.++|++++++ +|+++..
T Consensus 75 i~~~Pt~~~~~----~G~~v~~ 92 (142)
T 1qgv_A 75 LYDPCTVMFFF----RNKHIMI 92 (142)
T ss_dssp SCSSCEEEEEE----TTEEEEE
T ss_pred CCCCCEEEEEE----CCcEEEE
Confidence 99999999996 7877654
No 315
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.30 E-value=7.7e-12 Score=109.78 Aligned_cols=87 Identities=15% Similarity=0.132 Sum_probs=61.8
Q ss_pred eeeccccCCCEEEEEEecCCChhhhhhhHH---HHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcc
Q 013684 228 KVPVSSLVGKTVGLYFSARWCIPCEKFMPK---LLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLA 304 (438)
Q Consensus 228 ~~~l~~~~gk~vll~F~a~wC~~C~~~~p~---l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~ 304 (438)
.+..+..+||+|+|+|||+||++|+.+.|. ..++.+.+.++ +.++.|+.|...+..+.|.
T Consensus 31 a~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~----------fv~ikVD~de~~~l~~~y~------- 93 (173)
T 3ira_A 31 AFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEA----------FVSIKVDREERPDIDNIYM------- 93 (173)
T ss_dssp HHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHH----------CEEEEEETTTCHHHHHHHH-------
T ss_pred HHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhc----------CceeeeCCcccCcHHHHHH-------
Confidence 455555679999999999999999999883 24566666654 6667776665433222221
Q ss_pred cccCCchhHHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 305 LPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 305 ~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
..+...+|+.++|++++++++|+++..
T Consensus 94 --------~~~q~~~gv~g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 94 --------TVCQIILGRGGWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp --------HHHHHHHSCCCSSEEEEECTTSCEEEE
T ss_pred --------HHHHHHcCCCCCcceeeECCCCCceee
Confidence 112223599999999999999999986
No 316
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=1.9e-12 Score=109.39 Aligned_cols=75 Identities=20% Similarity=0.337 Sum_probs=63.3
Q ss_pred cccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCch
Q 013684 232 SSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPT 311 (438)
Q Consensus 232 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~ 311 (438)
..-++++++|+||++||++|+.+.|.+.++++++++. ++.++.|+++..
T Consensus 22 ~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~---------~v~~~~vd~~~~---------------------- 70 (137)
T 2dj0_A 22 ERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCT---------GLNFGKVDVGRY---------------------- 70 (137)
T ss_dssp HHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSS---------SCEEEECCTTTC----------------------
T ss_pred hcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC---------CeEEEEEeCccC----------------------
Confidence 3345679999999999999999999999999998742 578888877654
Q ss_pred hHHHHHhcCcC------ceeeEEEECCCCcEEEc
Q 013684 312 IKELTKYFDVQ------GIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 312 ~~~l~~~~~v~------~~P~~~lid~~G~i~~~ 339 (438)
.++++.|+|. ++||++++ ++|+++.+
T Consensus 71 -~~~~~~~~v~~~~~~~~~Pt~~~~-~~G~~~~~ 102 (137)
T 2dj0_A 71 -TDVSTRYKVSTSPLTKQLPTLILF-QGGKEAMR 102 (137)
T ss_dssp -HHHHHHTTCCCCSSSSCSSEEEEE-SSSSEEEE
T ss_pred -HHHHHHccCcccCCcCCCCEEEEE-ECCEEEEE
Confidence 5678889998 99999999 79998875
No 317
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.29 E-value=4e-11 Score=118.51 Aligned_cols=165 Identities=12% Similarity=0.098 Sum_probs=102.8
Q ss_pred CCCEEEEEEeccCCccchhhH------HHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHH
Q 013684 70 EGKVTALYFSANWYPPCGNFT------GVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKA 143 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~------p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 143 (438)
.+++++|+|||+||++|+... |.+.++++.++..+ +.++.|+.+.. ..
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~--v~~~~Vd~~~~------------------------~~ 82 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKG--VGFGLVDSEKD------------------------AA 82 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEETTTT------------------------HH
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCC--ceEEEEeCccc------------------------HH
Confidence 468999999999999974332 68888888887543 77777766643 68
Q ss_pred HhhhcCcCccceEEEecCCCCCCCcccccchhHHhhhCCCCccCChhHHHHHHHHHHhhhhHHHHHhhhhcCCCCCccCC
Q 013684 144 LNRKFDIEGIPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRGYLLGH 223 (438)
Q Consensus 144 l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~~~~i~~~~~~a~p~~~e~l~~L~~~~~~~~~~~~~~~~~g~~~~~f~l~~ 223 (438)
+++.|+|.++||++++. +|+.+... | +...+.+........ + |... ..
T Consensus 83 l~~~~~V~~~PTl~~f~----~G~~~~y~--------G----~~~~~~i~~~i~~~~------------~---~~v~-~i 130 (367)
T 3us3_A 83 VAKKLGLTEEDSIYVFK----EDEVIEYD--------G----EFSADTLVEFLLDVL------------E---DPVE-LI 130 (367)
T ss_dssp HHHHHTCCSTTEEEEEE----TTEEEECC--------S----CCSHHHHHHHHHHHH------------S---CSEE-EC
T ss_pred HHHHcCCCcCceEEEEE----CCcEEEeC--------C----CCCHHHHHHHHHHhc------------C---CCcE-Ec
Confidence 99999999999999997 66543211 1 122233322221111 1 1111 11
Q ss_pred CCCceee-ccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCC
Q 013684 224 PPDEKVP-VSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPW 302 (438)
Q Consensus 224 ~g~~~~~-l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~ 302 (438)
...+.+. +-....++++|.|+.+||. ...+.+.++++.+.+. +.+..++ +
T Consensus 131 ~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~~----------~~F~~~~---~------------- 181 (367)
T 3us3_A 131 EGERELQAFENIEDEIKLIGYFKNKDS---EHYKAFKEAAEEFHPY----------IPFFATF---D------------- 181 (367)
T ss_dssp CSHHHHHHHHHCCSSCEEEEECSCTTC---HHHHHHHHHHHHHTTT----------SCEEEEC---C-------------
T ss_pred CCHHHHHHHhccCCCcEEEEEECCCCc---hHHHHHHHHHHhhcCC----------cEEEEEC---C-------------
Confidence 1100010 0011236788899998865 5567788888888654 3444332 2
Q ss_pred cccccCCchhHHHHHhcCcCceeeEEEECC
Q 013684 303 LALPFGDPTIKELTKYFDVQGIPCLVIIGP 332 (438)
Q Consensus 303 ~~~p~~~d~~~~l~~~~~v~~~P~~~lid~ 332 (438)
..+++.|++.. |+++++.+
T Consensus 182 ----------~~~~~~~~v~~-p~i~lf~~ 200 (367)
T 3us3_A 182 ----------SKVAKKLTLKL-NEIDFYEA 200 (367)
T ss_dssp ----------HHHHHHHTCCT-TCEEEECT
T ss_pred ----------HHHHHHcCCCC-CeEEEEcC
Confidence 45788899986 99999965
No 318
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.29 E-value=4.7e-12 Score=102.92 Aligned_cols=72 Identities=24% Similarity=0.409 Sum_probs=62.8
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+|+++|+||++||++|+.+.|.|.++++++++ ++.++.|++|.+ .++++.|+
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~---~v~~~~vd~~~~------------------------~~l~~~~~ 68 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD---KLKIVKIDVDEN------------------------QETAGKYG 68 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT---TCEEEEEETTTC------------------------CSHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC---CcEEEEEECCCC------------------------HHHHHHcC
Confidence 789999999999999999999999999999864 388888888754 45778899
Q ss_pred cCccceEEEecCCCCCCCccccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
|.++|+++++ + +|+++.+.
T Consensus 69 v~~~Pt~~~~-~---~G~~~~~~ 87 (112)
T 2voc_A 69 VMSIPTLLVL-K---DGEVVETS 87 (112)
T ss_dssp CCSBSEEEEE-E---TTEEEEEE
T ss_pred CCcccEEEEE-e---CCEEEEEE
Confidence 9999999999 7 99887553
No 319
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.29 E-value=1.7e-12 Score=111.14 Aligned_cols=85 Identities=19% Similarity=0.353 Sum_probs=69.3
Q ss_pred ccCCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccC
Q 013684 56 STKEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPY 135 (438)
Q Consensus 56 ~~~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~ 135 (438)
..+.+++.+.....++|+++|+||++||++|+.+.|.|.++++++++ ++.++.|+.|..
T Consensus 40 v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~---~~~~~~vd~~~~------------------ 98 (148)
T 3p2a_A 40 VINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG---KVRFVKVNTEAE------------------ 98 (148)
T ss_dssp CEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTC------------------
T ss_pred ceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC---ceEEEEEECcCC------------------
Confidence 44666665554445789999999999999999999999999999864 388888877644
Q ss_pred CChHHHHHHhhhcCcCccceEEEecCCCCCCCcccc
Q 013684 136 SDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 136 ~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
..+++.|+|.++|++++++ +|+++.+
T Consensus 99 ------~~l~~~~~v~~~Pt~~~~~----~G~~~~~ 124 (148)
T 3p2a_A 99 ------PALSTRFRIRSIPTIMLYR----NGKMIDM 124 (148)
T ss_dssp ------HHHHHHTTCCSSSEEEEEE----TTEEEEE
T ss_pred ------HHHHHHCCCCccCEEEEEE----CCeEEEE
Confidence 6788999999999999995 8877654
No 320
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.28 E-value=2.6e-12 Score=105.33 Aligned_cols=74 Identities=15% Similarity=0.261 Sum_probs=62.0
Q ss_pred cccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhh
Q 013684 67 SDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 146 (438)
Q Consensus 67 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 146 (438)
.+.++|+++|+||++||++|+.+.|.|.+++++++ ++.++.|++|.. ..+++
T Consensus 27 ~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~d~~------------------------~~l~~ 78 (116)
T 3qfa_C 27 DAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS----NVIFLEVDVDDC------------------------QDVAS 78 (116)
T ss_dssp HHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCT----TSEEEEEETTTT------------------------HHHHH
T ss_pred HhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CCEEEEEECCCC------------------------HHHHH
Confidence 33478999999999999999999999999988873 377888877644 67889
Q ss_pred hcCcCccceEEEecCCCCCCCccccc
Q 013684 147 KFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 147 ~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
.|+|.++|+++++ + +|+++.+.
T Consensus 79 ~~~v~~~Pt~~~~-~---~G~~~~~~ 100 (116)
T 3qfa_C 79 ECEVKSMPTFQFF-K---KGQKVGEF 100 (116)
T ss_dssp HTTCCSSSEEEEE-S---SSSEEEEE
T ss_pred HcCCccccEEEEE-e---CCeEEEEE
Confidence 9999999999999 5 88877553
No 321
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.28 E-value=6.7e-12 Score=104.43 Aligned_cols=80 Identities=9% Similarity=0.113 Sum_probs=63.5
Q ss_pred CCCCCEEecccc-CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcC--CCCEEEEEEecCCCHHHHHHhHhcCCccccc
Q 013684 58 KEIGEEVKVSDL-EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNN--GSDFEVVFVSSDEDLNAFNNYRACMPWLAVP 134 (438)
Q Consensus 58 ~~~g~~v~l~~~-~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~--~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~ 134 (438)
.++++.+..... .+++++|+|||+||++|+.+.|.|.++++++... ..++.++.|+.|..
T Consensus 19 ~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~----------------- 81 (127)
T 3h79_A 19 ELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKY----------------- 81 (127)
T ss_dssp ECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTC-----------------
T ss_pred ECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcccc-----------------
Confidence 555555543332 4799999999999999999999999999988632 23577777776643
Q ss_pred CCChHHHHHHhhhcCcCccceEEEecC
Q 013684 135 YSDLETKKALNRKFDIEGIPCLVVLQP 161 (438)
Q Consensus 135 ~~d~~~~~~l~~~~~v~~~P~~~lvd~ 161 (438)
..+++.|+|.++|++++++.
T Consensus 82 -------~~l~~~~~v~~~Pt~~~~~~ 101 (127)
T 3h79_A 82 -------PDVIERMRVSGFPTMRYYTR 101 (127)
T ss_dssp -------HHHHHHTTCCSSSEEEEECS
T ss_pred -------HhHHHhcCCccCCEEEEEeC
Confidence 67899999999999999986
No 322
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.28 E-value=1.8e-11 Score=113.97 Aligned_cols=70 Identities=16% Similarity=0.368 Sum_probs=60.9
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+|||+||++|+.+.|.+.++++++++. ..++.++.|+++.+. ...
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-------~~~v~~~~vd~~~~~---------------------~~~ 80 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAW-------RPALYLAALDCAEET---------------------NSA 80 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGG-------TTTEEEEEEETTSTT---------------------THH
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhc-------cCcEEEEEEeCCchh---------------------hHH
Confidence 3589999999999999999999999999999863 236999999986432 378
Q ss_pred HHHhcCcCceeeEEEECC
Q 013684 315 LTKYFDVQGIPCLVIIGP 332 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~ 332 (438)
+++.|+|.++||++++++
T Consensus 81 l~~~~~v~~~Pt~~~~~~ 98 (244)
T 3q6o_A 81 VCRDFNIPGFPTVRFFXA 98 (244)
T ss_dssp HHHHTTCCSSSEEEEECT
T ss_pred HHHHcCCCccCEEEEEeC
Confidence 999999999999999975
No 323
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.28 E-value=4e-12 Score=107.45 Aligned_cols=83 Identities=22% Similarity=0.345 Sum_probs=65.9
Q ss_pred CCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCC
Q 013684 58 KEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSD 137 (438)
Q Consensus 58 ~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d 137 (438)
+++++.+......+|+++|+||++||++|+.+.|.|.++++++++.+.++.++.|+.+..
T Consensus 21 ~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-------------------- 80 (140)
T 2dj1_A 21 VLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA-------------------- 80 (140)
T ss_dssp ECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC--------------------
T ss_pred EcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc--------------------
Confidence 445554443333589999999999999999999999999999988654577776665533
Q ss_pred hHHHHHHhhhcCcCccceEEEecCCCCCCCc
Q 013684 138 LETKKALNRKFDIEGIPCLVVLQPYDDKDDA 168 (438)
Q Consensus 138 ~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v 168 (438)
..+++.|+|.++|+++++ + +|++
T Consensus 81 ----~~~~~~~~v~~~Pt~~~~-~---~G~~ 103 (140)
T 2dj1_A 81 ----SMLASKFDVSGYPTIKIL-K---KGQA 103 (140)
T ss_dssp ----HHHHHHTTCCSSSEEEEE-E---TTEE
T ss_pred ----HHHHHHCCCCccCeEEEE-E---CCcE
Confidence 678899999999999999 5 7773
No 324
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.27 E-value=2.3e-12 Score=104.35 Aligned_cols=71 Identities=17% Similarity=0.362 Sum_probs=60.6
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
++|+++|+||++||++|+.+.|.|.+++++++ ++.++.|++|.. ..+++.|+
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~----~~~~~~vd~~~~------------------------~~l~~~~~ 74 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP----QADFYKLDVDEL------------------------GDVAQKNE 74 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTC------------------------HHHHHHTT
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC----CCEEEEEECCCC------------------------HHHHHHcC
Confidence 58999999999999999999999999999873 377888877644 67889999
Q ss_pred cCccceEEEecCCCCCCCccccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
|.++|++++++ +|+++.+.
T Consensus 75 v~~~Pt~~~~~----~G~~~~~~ 93 (109)
T 3f3q_A 75 VSAMPTLLLFK----NGKEVAKV 93 (109)
T ss_dssp CCSSSEEEEEE----TTEEEEEE
T ss_pred CCccCEEEEEE----CCEEEEEE
Confidence 99999999997 78776553
No 325
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.27 E-value=3.6e-11 Score=119.46 Aligned_cols=85 Identities=12% Similarity=0.191 Sum_probs=65.7
Q ss_pred CCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCC---CCEEEEEEecCCCHHHHHHhHhcCCccccc
Q 013684 58 KEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNG---SDFEVVFVSSDEDLNAFNNYRACMPWLAVP 134 (438)
Q Consensus 58 ~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~---~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~ 134 (438)
+++++.+...--.+++++|+|||+||++|+.+.|.+.++++++++.. .++.++.|+.+..
T Consensus 9 ~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~----------------- 71 (382)
T 2r2j_A 9 SLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQH----------------- 71 (382)
T ss_dssp BCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTC-----------------
T ss_pred ECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCcc-----------------
Confidence 55555444322257899999999999999999999999999996431 2377777766533
Q ss_pred CCChHHHHHHhhhcCcCccceEEEecCCCCCCCccc
Q 013684 135 YSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATL 170 (438)
Q Consensus 135 ~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~ 170 (438)
..+++.|+|.++||++++. +|+++.
T Consensus 72 -------~~l~~~~~v~~~Pt~~~f~----~G~~~~ 96 (382)
T 2r2j_A 72 -------SDIAQRYRISKYPTLKLFR----NGMMMK 96 (382)
T ss_dssp -------HHHHHHTTCCEESEEEEEE----TTEEEE
T ss_pred -------HHHHHhcCCCcCCEEEEEe----CCcEee
Confidence 6889999999999999886 777654
No 326
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.27 E-value=4.7e-12 Score=101.62 Aligned_cols=70 Identities=11% Similarity=0.198 Sum_probs=53.3
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
++++++|+||++||++|+.+.|.|.++++++. ++.++.|++|.. ..+++.|+
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~----~~~~~~vd~~~~------------------------~~l~~~~~ 68 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN----YVEKIEILLQDM------------------------QEIAGRYA 68 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT----TEEEEEEEECCC--------------------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC----CceEEEEECCCC------------------------HHHHHhcC
Confidence 57999999999999999999999999999872 488888888755 56788999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
|.++|++++++ +|+++.+
T Consensus 69 v~~~Pt~~~~~----~G~~~~~ 86 (105)
T 4euy_A 69 VFTGPTVLLFY----NGKEILR 86 (105)
T ss_dssp -CCCCEEEEEE----TTEEEEE
T ss_pred CCCCCEEEEEe----CCeEEEE
Confidence 99999999995 8877654
No 327
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.26 E-value=4.1e-12 Score=109.16 Aligned_cols=69 Identities=23% Similarity=0.337 Sum_probs=59.3
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+|+|+|+|||+||++|+.+.|.|.++++++++. +.++.|++|.. .++++.|+
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~---~~~~~vd~d~~------------------------~~l~~~~~ 74 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM---AAIYLVDVDQT------------------------AVYTQYFD 74 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT---EEEEEEETTTC------------------------CHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc---eEEEEEECCcC------------------------HHHHHHcC
Confidence 5799999999999999999999999999887543 88888887654 56889999
Q ss_pred cCccceEEEecCCCCCCCcc
Q 013684 150 IEGIPCLVVLQPYDDKDDAT 169 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~ 169 (438)
|.++|+++++ + +|+++
T Consensus 75 v~~~Pt~~~~-~---~G~~v 90 (149)
T 3gix_A 75 ISYIPSTVFF-F---NGQHM 90 (149)
T ss_dssp CCSSSEEEEE-E---TTEEE
T ss_pred CCccCeEEEE-E---CCeEE
Confidence 9999999954 5 88777
No 328
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.26 E-value=7e-12 Score=96.13 Aligned_cols=64 Identities=16% Similarity=0.335 Sum_probs=55.7
Q ss_pred CEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHHH
Q 013684 237 KTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELT 316 (438)
Q Consensus 237 k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~ 316 (438)
.++++.||++|||+|+.+.|.+.++++++++ ++.++.|++|.+ .+++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~vd~~~~-----------------------~~~~ 49 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD----------AVEVEYINVMEN-----------------------PQKA 49 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS----------SEEEEEEESSSS-----------------------CCTT
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC----------ceEEEEEECCCC-----------------------HHHH
Confidence 5789999999999999999999999888763 589999998754 4567
Q ss_pred HhcCcCceeeEEEECCCCcE
Q 013684 317 KYFDVQGIPCLVIIGPEGKT 336 (438)
Q Consensus 317 ~~~~v~~~P~~~lid~~G~i 336 (438)
+.||+.++|++++ +|++
T Consensus 50 ~~~~v~~~Pt~~~---~G~~ 66 (85)
T 1fo5_A 50 MEYGIMAVPTIVI---NGDV 66 (85)
T ss_dssp TSTTTCCSSEEEE---TTEE
T ss_pred HHCCCcccCEEEE---CCEE
Confidence 8899999999988 8887
No 329
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.26 E-value=2.8e-12 Score=108.18 Aligned_cols=75 Identities=20% Similarity=0.255 Sum_probs=59.8
Q ss_pred EEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHHHH
Q 013684 238 TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTK 317 (438)
Q Consensus 238 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~ 317 (438)
+++|+||++||++|+.+.|.+.+++++++ +.++.|+++...+. ...+...++++
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~------------v~~~~vd~~~~~~~--------------~~~d~~~~l~~ 86 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD------------VPIVMFIWGSLIGE--------------RELSAARLEMN 86 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC------------SCEEEEEECTTCCH--------------HHHHHHHHHHH
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC------------CEEEEEECCCchhh--------------hhhhhhHHHHH
Confidence 89999999999999999999998887653 57888888643211 01123578899
Q ss_pred hcCcCceeeEEEECCCCcEEEc
Q 013684 318 YFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 318 ~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.|+|.++||+++++ +|+++.+
T Consensus 87 ~~~v~~~Pt~~~~~-~G~~v~~ 107 (135)
T 3emx_A 87 KAGVEGTPTLVFYK-EGRIVDK 107 (135)
T ss_dssp HHTCCSSSEEEEEE-TTEEEEE
T ss_pred HcCCceeCeEEEEc-CCEEEEE
Confidence 99999999999885 9999887
No 330
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.26 E-value=1.1e-11 Score=104.49 Aligned_cols=70 Identities=20% Similarity=0.442 Sum_probs=61.8
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+|+++|+||++||++|+.+.|.|.++++++++ ++.++.|++|.. ..+++.|+
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~---~v~~~~vd~~~~------------------------~~l~~~~~ 89 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDG---QIVIYKVDTEKE------------------------QELAGAFG 89 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTC------------------------HHHHHHTT
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC---CEEEEEEeCCCC------------------------HHHHHHcC
Confidence 478999999999999999999999999999864 388888877744 57889999
Q ss_pred cCccceEEEecCCCCCCCcc
Q 013684 150 IEGIPCLVVLQPYDDKDDAT 169 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~ 169 (438)
|.++|+++++++ +|+++
T Consensus 90 v~~~Pt~~~~~~---~G~~~ 106 (136)
T 2l5l_A 90 IRSIPSILFIPM---EGKPE 106 (136)
T ss_dssp CCSSCEEEEECS---SSCCE
T ss_pred CCCCCEEEEECC---CCcEE
Confidence 999999999998 99876
No 331
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.25 E-value=7.9e-12 Score=101.34 Aligned_cols=73 Identities=22% Similarity=0.514 Sum_probs=59.9
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
++|+++|+||++||++|+.+.|.|.+++++++..+ +.++.|+.|.. ..+++.|+
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~--~~~~~vd~~~~------------------------~~~~~~~~ 73 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSN--VSFLSIDADEN------------------------SEISELFE 73 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTT--SEEEEEETTTC------------------------HHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCC--EEEEEEecccC------------------------HHHHHHcC
Confidence 47999999999999999999999999998875543 88888887754 57889999
Q ss_pred cCccceEEEecCCCCCCCccccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
+.++|+++++ + +|+++.+.
T Consensus 74 v~~~Pt~~~~-~---~G~~~~~~ 92 (112)
T 3d6i_A 74 ISAVPYFIII-H---KGTILKEL 92 (112)
T ss_dssp CCSSSEEEEE-E---TTEEEEEE
T ss_pred CCcccEEEEE-E---CCEEEEEe
Confidence 9999999988 5 88877653
No 332
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.25 E-value=3e-12 Score=104.68 Aligned_cols=72 Identities=22% Similarity=0.462 Sum_probs=59.9
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
++++++|+||++||++|+.+.|.+.++++++++. +.++.++.|+++.+ ..
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-------~~~v~~~~vd~~~~-----------------------~~ 72 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAE-------GSEIRLAKVDATEE-----------------------SD 72 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTT-------CCCCBCEEEETTTC-----------------------CS
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhcc-------CCcEEEEEEcCCCC-----------------------HH
Confidence 5799999999999999999999999999888754 23567777776643 46
Q ss_pred HHHhcCcCceeeEEEECCCCcEE
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTV 337 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~ 337 (438)
+++.|+|.++|+++++ ++|+++
T Consensus 73 ~~~~~~v~~~Pt~~~~-~~g~~~ 94 (120)
T 1mek_A 73 LAQQYGVRGYPTIKFF-RNGDTA 94 (120)
T ss_dssp SHHHHTCCSSSEEEEE-ESSCSS
T ss_pred HHHHCCCCcccEEEEE-eCCCcC
Confidence 7889999999999999 788754
No 333
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.25 E-value=1.6e-11 Score=103.62 Aligned_cols=67 Identities=12% Similarity=0.093 Sum_probs=56.3
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
+|++++|+||++||++|+.+.|.|.++++++. ++.++.|+++..
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-----------~v~~~~vd~~~~------------------------- 72 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-----------ETKFVKAIVNSC------------------------- 72 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-----------SEEEEEECCSSS-------------------------
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-----------CcEEEEEEhhcC-------------------------
Confidence 35899999999999999999999999988763 477777777643
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.+.|+|.++||++++ ++|+++.+
T Consensus 73 -~~~~~i~~~Pt~~~~-~~G~~v~~ 95 (135)
T 2dbc_A 73 -IEHYHDNCLPTIFVY-KNGQIEGK 95 (135)
T ss_dssp -CSSCCSSCCSEEEEE-SSSSCSEE
T ss_pred -cccCCCCCCCEEEEE-ECCEEEEE
Confidence 157999999999999 59988776
No 334
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.25 E-value=7.1e-12 Score=96.11 Aligned_cols=63 Identities=14% Similarity=0.224 Sum_probs=54.6
Q ss_pred EEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHHHH
Q 013684 238 TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTK 317 (438)
Q Consensus 238 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~ 317 (438)
++++.||++||++|+.+.|.+.++++++++ ++.++.|++|.+ .++++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~----------~~~~~~vd~~~~-----------------------~~~~~ 49 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD----------KIDVEKIDIMVD-----------------------REKAI 49 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS----------SCCEEEECTTTC-----------------------GGGGG
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC----------CeEEEEEECCCC-----------------------HHHHH
Confidence 468999999999999999999999988864 478888888755 46788
Q ss_pred hcCcCceeeEEEECCCCcE
Q 013684 318 YFDVQGIPCLVIIGPEGKT 336 (438)
Q Consensus 318 ~~~v~~~P~~~lid~~G~i 336 (438)
.||+.++|++++ +|++
T Consensus 50 ~~~v~~~Pt~~~---~G~~ 65 (85)
T 1nho_A 50 EYGLMAVPAIAI---NGVV 65 (85)
T ss_dssp GTCSSCSSEEEE---TTTE
T ss_pred hCCceeeCEEEE---CCEE
Confidence 999999999988 8887
No 335
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.25 E-value=1.8e-12 Score=113.98 Aligned_cols=104 Identities=12% Similarity=0.070 Sum_probs=65.6
Q ss_pred EeccccCCCEEEEEEeccCCccchhhHHHH---HHHHHHHhcCCCCEEEEEEecCCCHHHHHH--hHhcCCcccccCCCh
Q 013684 64 VKVSDLEGKVTALYFSANWYPPCGNFTGVL---VDVYEELRNNGSDFEVVFVSSDEDLNAFNN--YRACMPWLAVPYSDL 138 (438)
Q Consensus 64 v~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~--~~~~~~~~~~~~~d~ 138 (438)
+.++..+||+|+|+|||+||++|+.+.+.+ .++.+.+++ ++.++.|++|+..+.... .........+.....
T Consensus 40 ~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~---~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (172)
T 3f9u_A 40 MEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN---DYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGD 116 (172)
T ss_dssp HHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH---HCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHH
T ss_pred HHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC---CEEEEEEecCcccccchhhhhhhcchhhhhhhhhh
Confidence 344556799999999999999999974444 455555544 389999998865421000 000111111111011
Q ss_pred HHHHHHhhhcCcCccceEEEecCCCCCCCcccccc
Q 013684 139 ETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 139 ~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
.......+.|+|.++|++++||+ +|+++.+..
T Consensus 117 ~~~~~~~~~~~v~~~Pt~~lid~---~G~~~~~~~ 148 (172)
T 3f9u_A 117 KWSYLQRVKFGANAQPFYVLIDN---EGNPLNKSY 148 (172)
T ss_dssp HHHHHHHHHHSCCCSSEEEEECT---TSCBSSCCB
T ss_pred hhhHHHHHHcCCCCcceEEEECC---CCCEEeecc
Confidence 11122368899999999999999 999987643
No 336
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.25 E-value=4.3e-12 Score=101.98 Aligned_cols=84 Identities=15% Similarity=0.235 Sum_probs=67.1
Q ss_pred CCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCC
Q 013684 58 KEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSD 137 (438)
Q Consensus 58 ~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d 137 (438)
..+++.+.....++++++|+||++||++|+.+.|.|.++++++++ ++.++.|+.|..
T Consensus 8 ~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~-------------------- 64 (109)
T 3tco_A 8 VLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG---KAVFGRLNVDEN-------------------- 64 (109)
T ss_dssp ECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTC--------------------
T ss_pred EecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC---CceEEEEccccC--------------------
Confidence 344444433333589999999999999999999999999999865 378888877644
Q ss_pred hHHHHHHhhhcCcCccceEEEecCCCCCCCccccc
Q 013684 138 LETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 138 ~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
..+++.|++.++|+++++ + +|+++.+.
T Consensus 65 ----~~~~~~~~i~~~Pt~~~~-~---~g~~~~~~ 91 (109)
T 3tco_A 65 ----QKIADKYSVLNIPTTLIF-V---NGQLVDSL 91 (109)
T ss_dssp ----HHHHHHTTCCSSSEEEEE-E---TTEEEEEE
T ss_pred ----HHHHHhcCcccCCEEEEE-c---CCcEEEee
Confidence 678899999999999999 6 89877653
No 337
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.25 E-value=9.7e-12 Score=99.41 Aligned_cols=71 Identities=23% Similarity=0.376 Sum_probs=61.4
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+|+++|+||++||++|+.+.|.|.++++++++ ++.++.|+.|.+ .++++.|+
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~---~v~~~~v~~~~~------------------------~~~~~~~~ 68 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD---KVTVAKLNVDEN------------------------PETTSQFG 68 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT---TCEEEEEETTTC------------------------HHHHHHTT
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CcEEEEEECcCC------------------------HHHHHHcC
Confidence 578999999999999999999999999998754 388888887754 57888999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
+.++|+++++ + +|+++.+
T Consensus 69 v~~~Pt~~~~-~---~G~~~~~ 86 (105)
T 1nsw_A 69 IMSIPTLILF-K---GGRPVKQ 86 (105)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CccccEEEEE-e---CCeEEEE
Confidence 9999999999 6 8887654
No 338
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.25 E-value=1.3e-11 Score=98.68 Aligned_cols=71 Identities=21% Similarity=0.382 Sum_probs=62.0
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
++++++|+||++||++|+.+.|.+.+++++++++ +.++.|+.|.. ..+++.|+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---~~~~~v~~~~~------------------------~~~~~~~~ 70 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK---ADILKLDVDEN------------------------PSTAAKYE 70 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC------------------------HHHHHHTT
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---cEEEEEECCcC------------------------HHHHHhCC
Confidence 7899999999999999999999999999998653 88888887754 57889999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
+.++|++++++ +|+++.+
T Consensus 71 v~~~Pt~~~~~----~G~~~~~ 88 (106)
T 3die_A 71 VMSIPTLIVFK----DGQPVDK 88 (106)
T ss_dssp CCSBSEEEEEE----TTEEEEE
T ss_pred CcccCEEEEEe----CCeEEEE
Confidence 99999999995 8877654
No 339
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.24 E-value=2.9e-12 Score=107.40 Aligned_cols=71 Identities=18% Similarity=0.346 Sum_probs=62.5
Q ss_pred CEEEEEEeccCC--ccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 72 KVTALYFSANWY--PPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 72 k~vll~F~a~wC--~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
++|+|+|||+|| ++|+.+.|.|.++.+++.++ +.++.|++|.. .+++.+|+
T Consensus 34 ~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~---v~~~KVdvDe~------------------------~~la~~yg 86 (137)
T 2qsi_A 34 KIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR---LVAAEVAAEAE------------------------RGLMARFG 86 (137)
T ss_dssp SEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT---EEEEEECGGGH------------------------HHHHHHHT
T ss_pred CcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC---cEEEEEECCCC------------------------HHHHHHcC
Confidence 499999999999 99999999999999998653 88888876643 78999999
Q ss_pred cCccceEEEecCCCCCCCcccccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
|.++||++++. +|+.+.+..
T Consensus 87 V~siPTlilFk----dG~~v~~~v 106 (137)
T 2qsi_A 87 VAVCPSLAVVQ----PERTLGVIA 106 (137)
T ss_dssp CCSSSEEEEEE----CCEEEEEEE
T ss_pred CccCCEEEEEE----CCEEEEEEe
Confidence 99999999997 898887754
No 340
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.24 E-value=1.9e-11 Score=101.89 Aligned_cols=70 Identities=17% Similarity=0.378 Sum_probs=60.0
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+|+++|+||++||++|+.+.|.|.++++++++. +.++.|+.|.. ..+++.|+
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~vd~~~~------------------------~~l~~~~~ 86 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV---VKVGAVNADKH------------------------QSLGGQYG 86 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT---SEEEEEETTTC------------------------HHHHHHHT
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc---eEEEEEeCCCC------------------------HHHHHHcC
Confidence 4789999999999999999999999999998642 77888877643 67889999
Q ss_pred cCccceEEEecCCCCCCCcc
Q 013684 150 IEGIPCLVVLQPYDDKDDAT 169 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~ 169 (438)
|.++|+++++++ +|.++
T Consensus 87 v~~~Pt~~~~~~---~~~~~ 103 (130)
T 2dml_A 87 VQGFPTIKIFGA---NKNKP 103 (130)
T ss_dssp CCSSSEEEEESS---CTTSC
T ss_pred CCccCEEEEEeC---CCCeE
Confidence 999999999997 77633
No 341
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.23 E-value=4.6e-12 Score=105.63 Aligned_cols=81 Identities=16% Similarity=0.353 Sum_probs=63.9
Q ss_pred EeccccCCCEEEEEEeccCCccchhhHHHH---HHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHH
Q 013684 64 VKVSDLEGKVTALYFSANWYPPCGNFTGVL---VDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLET 140 (438)
Q Consensus 64 v~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~ 140 (438)
+.+++.+||+++|+||++||++|+.+.|.+ .++.+.++.. +.++.|+.|.+..
T Consensus 20 ~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~--------------------- 75 (130)
T 2kuc_A 20 LKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRH---FVNLKMDMEKGEG--------------------- 75 (130)
T ss_dssp HHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHH---SEEEEECSSSTTH---------------------
T ss_pred HHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcC---eEEEEEecCCcch---------------------
Confidence 444556789999999999999999999998 6666665432 6666666654222
Q ss_pred HHHHhhhcCcCccceEEEecCCCCCCCccccc
Q 013684 141 KKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 141 ~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
..+++.|+|.++|+++++|+ +|+++.+.
T Consensus 76 -~~~~~~~~v~~~Pt~~~~d~---~G~~~~~~ 103 (130)
T 2kuc_A 76 -VELRKKYGVHAYPTLLFINS---SGEVVYRL 103 (130)
T ss_dssp -HHHHHHTTCCSSCEEEEECT---TSCEEEEE
T ss_pred -HHHHHHcCCCCCCEEEEECC---CCcEEEEe
Confidence 68899999999999999998 99887653
No 342
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.23 E-value=1e-11 Score=102.96 Aligned_cols=78 Identities=22% Similarity=0.451 Sum_probs=61.5
Q ss_pred CCCEEEEEEecC-------CChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCccccc
Q 013684 235 VGKTVGLYFSAR-------WCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPF 307 (438)
Q Consensus 235 ~gk~vll~F~a~-------wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~ 307 (438)
.|++++|+||++ ||++|+.+.|.+.++++++++ ++.++.|+++.. ..|.
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~----------~~~~~~vd~~~~-~~~~------------- 78 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE----------GCVFIYCQVGEK-PYWK------------- 78 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT----------TEEEEEEECCCH-HHHH-------------
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC----------CcEEEEEECCCc-hhhh-------------
Confidence 589999999999 999999999999998887653 588999988632 1110
Q ss_pred CCchhHHHHHhcCcCceeeEEEECCCCcEEE
Q 013684 308 GDPTIKELTKYFDVQGIPCLVIIGPEGKTVT 338 (438)
Q Consensus 308 ~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~ 338 (438)
+....+++.|+|.++||+++++..+++..
T Consensus 79 --d~~~~~~~~~~i~~~Pt~~~~~~~~~~~g 107 (123)
T 1wou_A 79 --DPNNDFRKNLKVTAVPTLLKYGTPQKLVE 107 (123)
T ss_dssp --CTTCHHHHHHCCCSSSEEEETTSSCEEEG
T ss_pred --chhHHHHHHCCCCeeCEEEEEcCCceEec
Confidence 22367888999999999999977555553
No 343
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.23 E-value=1.4e-11 Score=99.74 Aligned_cols=75 Identities=15% Similarity=0.244 Sum_probs=60.2
Q ss_pred cccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhh
Q 013684 67 SDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 146 (438)
Q Consensus 67 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 146 (438)
.+.+||+++|+||++||++|+.+.|.|.+++++++ ++.++.|+.+.. ...+++
T Consensus 20 ~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~----~v~~~~vd~~~~-----------------------~~~~~~ 72 (111)
T 2pu9_C 20 KAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL----DVIFLKLDCNQE-----------------------NKTLAK 72 (111)
T ss_dssp TTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSST-----------------------THHHHH
T ss_pred HhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC----CeEEEEEecCcc-----------------------hHHHHH
Confidence 33468999999999999999999999999998874 377888877621 167889
Q ss_pred hcCcCccceEEEecCCCCCCCccccc
Q 013684 147 KFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 147 ~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
.|++.++|+++ +.+ +|+++.+.
T Consensus 73 ~~~v~~~Pt~~-~~~---~G~~~~~~ 94 (111)
T 2pu9_C 73 ELGIRVVPTFK-ILK---ENSVVGEV 94 (111)
T ss_dssp HHCCSBSSEEE-EES---SSSEEEEE
T ss_pred HcCCCeeeEEE-EEe---CCcEEEEE
Confidence 99999999954 556 89887543
No 344
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.23 E-value=1.5e-11 Score=99.58 Aligned_cols=71 Identities=24% Similarity=0.409 Sum_probs=61.0
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+|+++|+||++||++|+.+.|.|.++++++++ ++.++.|+.|.+ ..+++.|+
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~------------------------~~~~~~~~ 74 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD---KIEIVKLNIDEN------------------------PGTAAKYG 74 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTC------------------------HHHHHHTT
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC---CeEEEEEEcCCC------------------------HHHHHhCC
Confidence 478999999999999999999999999998854 388888887754 57888999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
+.++|+++++ + +|+++.+
T Consensus 75 v~~~Pt~~~~-~---~G~~~~~ 92 (112)
T 1t00_A 75 VMSIPTLNVY-Q---GGEVAKT 92 (112)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CCcccEEEEE-e---CCEEEEE
Confidence 9999998888 5 8887654
No 345
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.22 E-value=1.4e-11 Score=98.95 Aligned_cols=71 Identities=21% Similarity=0.466 Sum_probs=61.1
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+|+++|+||++||++|+.+.|.|.++++++++ ++.++.|+.|.. ..+++.|+
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~------------------------~~~~~~~~ 71 (108)
T 2trx_A 19 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQG---KLTVAKLNIDQN------------------------PGTAPKYG 71 (108)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTC------------------------TTHHHHTT
T ss_pred cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC---CcEEEEEECCCC------------------------HHHHHHcC
Confidence 579999999999999999999999999998864 388888887754 45778899
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
+.++|+++++ + +|+++.+
T Consensus 72 v~~~Pt~~~~-~---~G~~~~~ 89 (108)
T 2trx_A 72 IRGIPTLLLF-K---NGEVAAT 89 (108)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CcccCEEEEE-e---CCEEEEE
Confidence 9999999999 6 8987754
No 346
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.22 E-value=1.9e-11 Score=101.50 Aligned_cols=71 Identities=20% Similarity=0.398 Sum_probs=60.9
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
++|+++|+||++||++|+.+.|.|.+++++++ ++.++.|+.|.. .++++.|+
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~vd~d~~------------------------~~l~~~~~ 88 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP----NVLFLKVDTDEL------------------------KSVASDWA 88 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS----SEEEEEEETTTS------------------------HHHHHHTT
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CcEEEEEECccC------------------------HHHHHHcC
Confidence 58999999999999999999999999998874 388888877643 67889999
Q ss_pred cCccceEEEecCCCCCCCccccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
|.++|+++++ + +|+++.+.
T Consensus 89 v~~~Pt~~~~-~---~G~~~~~~ 107 (124)
T 1xfl_A 89 IQAMPTFMFL-K---EGKILDKV 107 (124)
T ss_dssp CCSSSEEEEE-E---TTEEEEEE
T ss_pred CCccCEEEEE-E---CCEEEEEE
Confidence 9999998888 5 89887553
No 347
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.22 E-value=2.2e-11 Score=97.70 Aligned_cols=71 Identities=20% Similarity=0.402 Sum_probs=60.8
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+|+++|+||++||++|+.+.|.|.++++++++ ++.++.|+.|.+ .++++.|+
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~------------------------~~~~~~~~ 70 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD---KLKCVKLNTDES------------------------PNVASEYG 70 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTC------------------------HHHHHHHT
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC---ceEEEEEECCCC------------------------HHHHHHCC
Confidence 478999999999999999999999999998864 388888877754 57888999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
+.++|+++++ + +|+++.+
T Consensus 71 v~~~Pt~~~~-~---~G~~~~~ 88 (107)
T 1dby_A 71 IRSIPTIMVF-K---GGKKCET 88 (107)
T ss_dssp CCSSCEEEEE-S---SSSEEEE
T ss_pred CCcCCEEEEE-e---CCEEEEE
Confidence 9999998888 5 8887654
No 348
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.21 E-value=1.8e-11 Score=98.45 Aligned_cols=70 Identities=9% Similarity=0.130 Sum_probs=60.2
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
++|+++|+||++||++|+.+.|.|.++++++. ++.++.|+.|.. ..+++.|+
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~----~~~~~~vd~~~~------------------------~~~~~~~~ 71 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP----QAVFLEVDVHQC------------------------QGTAATNN 71 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTS------------------------HHHHHHTT
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC----CcEEEEEECccC------------------------HHHHHhcC
Confidence 57999999999999999999999999999872 388888877744 56888999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
+.++|+++++ + +|+++.+
T Consensus 72 v~~~Pt~~~~-~---~G~~~~~ 89 (107)
T 1gh2_A 72 ISATPTFQFF-R---NKVRIDQ 89 (107)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CCcccEEEEE-E---CCeEEEE
Confidence 9999999999 5 8877654
No 349
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.21 E-value=1.9e-11 Score=100.56 Aligned_cols=71 Identities=15% Similarity=0.350 Sum_probs=61.4
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+|+++|+||++||++|+.+.|.|.++++++++ ++.++.|++|.. ..+++.|+
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~---~v~~~~vd~d~~------------------------~~l~~~~~ 82 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG---KVVMAKVDIDDH------------------------TDLAIEYE 82 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---SSEEEEEETTTT------------------------HHHHHHTT
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEeCCCC------------------------HHHHHHcC
Confidence 478999999999999999999999999998754 388888877643 57889999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
|.++|+++++ + +|+++.+
T Consensus 83 v~~~Pt~~~~-~---~G~~~~~ 100 (119)
T 1w4v_A 83 VSAVPTVLAM-K---NGDVVDK 100 (119)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CCcccEEEEE-e---CCcEEEE
Confidence 9999999999 6 8987754
No 350
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.21 E-value=1.2e-11 Score=103.26 Aligned_cols=71 Identities=20% Similarity=0.414 Sum_probs=61.4
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+++++|+||++||++|+.+.|.|.++++++++ ++.++.|++|.. .++++.|+
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---~v~~~~vd~~~~------------------------~~l~~~~~ 91 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQG---KLTVAKLNIDQN------------------------PGTAPKYG 91 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT---TEEEEEEETTTC------------------------CTTSGGGT
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC---CeEEEEEECCCC------------------------HHHHHHcC
Confidence 579999999999999999999999999998864 388888887754 35678899
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
|.++|+++++ + +|+++.+
T Consensus 92 v~~~Pt~~~~-~---~G~~~~~ 109 (128)
T 2o8v_B 92 IRGIPTLLLF-K---NGEVAAT 109 (128)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CCccCEEEEE-e---CCEEEEE
Confidence 9999999999 6 9987754
No 351
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=2.4e-11 Score=102.50 Aligned_cols=75 Identities=15% Similarity=0.310 Sum_probs=61.4
Q ss_pred ccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhh
Q 013684 68 DLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRK 147 (438)
Q Consensus 68 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~ 147 (438)
.-++++++|+|||+||++|+.+.|.|.++++++++. ++.++.|++|.. ..+++.
T Consensus 23 ~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~--~v~~~~vd~~~~------------------------~~~~~~ 76 (137)
T 2dj0_A 23 RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCT--GLNFGKVDVGRY------------------------TDVSTR 76 (137)
T ss_dssp HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSS--SCEEEECCTTTC------------------------HHHHHH
T ss_pred cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC--CeEEEEEeCccC------------------------HHHHHH
Confidence 335679999999999999999999999999999753 377777766543 567888
Q ss_pred cCcC------ccceEEEecCCCCCCCccccc
Q 013684 148 FDIE------GIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 148 ~~v~------~~P~~~lvd~~~~~G~v~~~~ 172 (438)
|+|. ++|+++++. +|+++.+.
T Consensus 77 ~~v~~~~~~~~~Pt~~~~~----~G~~~~~~ 103 (137)
T 2dj0_A 77 YKVSTSPLTKQLPTLILFQ----GGKEAMRR 103 (137)
T ss_dssp TTCCCCSSSSCSSEEEEES----SSSEEEEE
T ss_pred ccCcccCCcCCCCEEEEEE----CCEEEEEe
Confidence 9998 999999994 88877543
No 352
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.20 E-value=2.2e-11 Score=98.28 Aligned_cols=71 Identities=24% Similarity=0.462 Sum_probs=61.2
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+++++|+||++||++|+.+.|.+.++++++++ ++.++.|++|.. ..+++.|+
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~---~v~~~~vd~~~~------------------------~~l~~~~~ 73 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE---SFGFYYVDVEEE------------------------KTLFQRFS 73 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTC------------------------HHHHHHTT
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC---ceEEEEEECCcC------------------------hhHHHhcC
Confidence 578999999999999999999999999999864 388888887754 67889999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
|.++|+++++. +|+.+.+
T Consensus 74 v~~~Pt~~~~~----~g~~~~~ 91 (111)
T 3gnj_A 74 LKGVPQILYFK----DGEYKGK 91 (111)
T ss_dssp CCSSCEEEEEE----TTEEEEE
T ss_pred CCcCCEEEEEE----CCEEEEE
Confidence 99999999994 8877644
No 353
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.20 E-value=3.1e-11 Score=96.57 Aligned_cols=71 Identities=18% Similarity=0.366 Sum_probs=61.9
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+++++|+||++||++|+.+.|.|.++++++++ ++.++.|+.|.. ..+++.|+
T Consensus 19 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~------------------------~~~~~~~~ 71 (107)
T 2i4a_A 19 ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG---KVTVAKVNIDDN------------------------PETPNAYQ 71 (107)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT---SEEEEEEETTTC------------------------CHHHHHTT
T ss_pred CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC---cEEEEEEECCCC------------------------HHHHHhcC
Confidence 579999999999999999999999999999864 388888887754 46788999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
+.++|+++++ + +|+++.+
T Consensus 72 v~~~Pt~~~~-~---~G~~~~~ 89 (107)
T 2i4a_A 72 VRSIPTLMLV-R---DGKVIDK 89 (107)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CCccCEEEEE-e---CCEEEEE
Confidence 9999999999 6 9987754
No 354
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.20 E-value=3.5e-11 Score=101.94 Aligned_cols=71 Identities=11% Similarity=0.170 Sum_probs=61.4
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.. ..+++.|+
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~---v~~~~vd~~~~------------------------~~l~~~~~ 75 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS---AVFGRINIATN------------------------PWTAEKYG 75 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---SEEEEEETTTC------------------------HHHHHHHT
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc---eEEEEEECCcC------------------------HhHHHHCC
Confidence 4799999999999999999999999999998653 88888877654 67889999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
|.++|+++++ + +|+++.+
T Consensus 76 v~~~Pt~~~~-~---~G~~~~~ 93 (140)
T 3hz4_A 76 VQGTPTFKFF-C---HGRPVWE 93 (140)
T ss_dssp CCEESEEEEE-E---TTEEEEE
T ss_pred CCcCCEEEEE-e---CCcEEEE
Confidence 9999999998 5 8877654
No 355
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.83 E-value=1.5e-12 Score=108.65 Aligned_cols=81 Identities=25% Similarity=0.455 Sum_probs=65.6
Q ss_pred CCEEeccccCCCEEEEEEeccCCccchhhHHHH---HHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCC
Q 013684 61 GEEVKVSDLEGKVTALYFSANWYPPCGNFTGVL---VDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSD 137 (438)
Q Consensus 61 g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d 137 (438)
.+.+.+...+||+++|+||++||++|+.+.|.+ .++.+.++. ++.++.|++|.+..
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~------------------ 67 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA---RFVVASVSVDTPEG------------------ 67 (130)
Confidence 667788888999999999999999999999999 888877654 37777776653321
Q ss_pred hHHHHHHhhhcCcCccceEEEecCCCCCCCc
Q 013684 138 LETKKALNRKFDIEGIPCLVVLQPYDDKDDA 168 (438)
Q Consensus 138 ~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v 168 (438)
..+++.|+|.++|+++++|+ .+|++
T Consensus 68 ----~~~~~~~~v~~~Pt~~~~d~--~~G~~ 92 (130)
T 2lst_A 68 ----QELARRYRVPGTPTFVFLVP--KAGAW 92 (130)
Confidence 67889999999999999985 15776
No 356
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.20 E-value=3e-11 Score=98.06 Aligned_cols=83 Identities=18% Similarity=0.342 Sum_probs=66.7
Q ss_pred CCCCCEEeccc-cCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCC
Q 013684 58 KEIGEEVKVSD-LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYS 136 (438)
Q Consensus 58 ~~~g~~v~l~~-~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~ 136 (438)
+.+++.+.... -.+++++|+||++||++|+.+.|.|.++++++++ ++.++.|+.|..
T Consensus 11 ~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~v~~~~v~~~~~------------------- 68 (115)
T 1thx_A 11 TITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD---RLKVVKLEIDPN------------------- 68 (115)
T ss_dssp ECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT---TCEEEEEESTTC-------------------
T ss_pred EeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC---cEEEEEEEcCCC-------------------
Confidence 44444443222 2579999999999999999999999999998864 388888887754
Q ss_pred ChHHHHHHhhhcCcCccceEEEecCCCCCCCcccc
Q 013684 137 DLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 137 d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
..+++.|++.++|+++++ + +|+++.+
T Consensus 69 -----~~~~~~~~v~~~Pt~~~~-~---~G~~~~~ 94 (115)
T 1thx_A 69 -----PTTVKKYKVEGVPALRLV-K---GEQILDS 94 (115)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-E---TTEEEEE
T ss_pred -----HHHHHHcCCCceeEEEEE-c---CCEEEEE
Confidence 578899999999999999 7 9988754
No 357
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.19 E-value=2.1e-11 Score=97.38 Aligned_cols=73 Identities=16% Similarity=0.327 Sum_probs=61.4
Q ss_pred cccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhh
Q 013684 67 SDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 146 (438)
Q Consensus 67 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 146 (438)
++.++|+++|+||++||++|+.+.|.+.+++++++ ++.++.|+.|.. ..+++
T Consensus 16 ~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~----~~~~~~vd~~~~------------------------~~~~~ 67 (105)
T 3m9j_A 16 DAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS----NVIFLEVDVDDC------------------------QDVAS 67 (105)
T ss_dssp HHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHST----TSEEEEEETTTC------------------------HHHHH
T ss_pred HhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHcc----CeEEEEEEhhhh------------------------HHHHH
Confidence 33468999999999999999999999999998873 377888877644 67889
Q ss_pred hcCcCccceEEEecCCCCCCCcccc
Q 013684 147 KFDIEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 147 ~~~v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
.|++.++|+++++ + +|+.+.+
T Consensus 68 ~~~v~~~Pt~~~~-~---~g~~~~~ 88 (105)
T 3m9j_A 68 ESEVKSMPTFQFF-K---KGQKVGE 88 (105)
T ss_dssp HTTCCBSSEEEEE-E---TTEEEEE
T ss_pred HcCCCcCcEEEEE-E---CCeEEEE
Confidence 9999999999999 4 7877654
No 358
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.82 E-value=1.7e-12 Score=103.66 Aligned_cols=71 Identities=25% Similarity=0.535 Sum_probs=60.8
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+||++||++|+.+.|.+.++.++++++ +.++.|++|.+ ..
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~-----------------------~~ 64 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGK----------VKVVKVNVDEN-----------------------PN 64 (106)
Confidence 4789999999999999999999999999888643 67777776643 56
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
+++.|++.++|+++++ ++|+++.+
T Consensus 65 ~~~~~~v~~~Pt~~~~-~~g~~~~~ 88 (106)
T 2yj7_A 65 TAAQYGIRSIPTLLLF-KNGQVVDR 88 (106)
Confidence 7889999999999999 89988765
No 359
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.19 E-value=1.3e-11 Score=108.07 Aligned_cols=119 Identities=9% Similarity=0.228 Sum_probs=91.2
Q ss_pred HhhccchhHHHHHhhcccccCCCC-CEEeccc-cCCCEEEEEEe-ccCCccchhhHHHHHHHHHHHhcCCCCEE-EEEEe
Q 013684 38 LIMSLSQWYVQQLRRRMTSTKEIG-EEVKVSD-LEGKVTALYFS-ANWYPPCGNFTGVLVDVYEELRNNGSDFE-VVFVS 113 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~~~g-~~v~l~~-~~gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~~~~~~~-iv~vs 113 (438)
.+|+.+|+|+ +.+..+ +.++|++ ++||+++|+|| ..|||.|..+++.+++.+++|++.| ++ |++||
T Consensus 15 ~vGd~aPdf~--------l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~g--v~~VigIS 84 (171)
T 2xhf_A 15 KVGDIIPDVL--------VYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEG--YHTIACIA 84 (171)
T ss_dssp CTTCBCCCCE--------EECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTT--CCEEEEEE
T ss_pred cCcCCCCCeE--------EecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCC--CCEEEEEe
Confidence 4799999999 764332 8999999 49999988888 7899999999999999999999987 85 99999
Q ss_pred cCCCHHHHHHhHhcCCc--ccccCCChHHHHHHhhhcCcC-----------ccceEEEecCCCCCCCcccccc
Q 013684 114 SDEDLNAFNNYRACMPW--LAVPYSDLETKKALNRKFDIE-----------GIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 114 ~D~~~~~~~~~~~~~~~--~~~~~~d~~~~~~l~~~~~v~-----------~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
.| +....++|.++.+. .....+|.+ .++++.||+. ....++||| +|+|++...
T Consensus 85 ~D-~~~~~~~w~~~~~~~~~f~lLSD~~--~~~a~ayGv~~~~~~~g~g~~~~R~tfvId----dG~V~~~~v 150 (171)
T 2xhf_A 85 VN-DPFVMAAWGKTVDPEHKIRMLADMH--GEFTRALGTELDSSKMLGNNRSRRYAMLID----DNKIRSVST 150 (171)
T ss_dssp SS-CHHHHHHHHHHHCTTCCSEEEECTT--SHHHHHHTCBCCCHHHHSSCCBCCEEEEEE----TTEEEEEEE
T ss_pred CC-CHHHHHHHHHhcCCCCCeEEEEeCC--chHHHHhCCceeccccCCCcceEEEEEEEe----CCEEEEEEE
Confidence 99 44555666654443 122233544 7889999873 346788886 898887654
No 360
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.19 E-value=7.7e-11 Score=121.27 Aligned_cols=89 Identities=17% Similarity=0.305 Sum_probs=69.8
Q ss_pred CCCCCceeecccc-CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcC
Q 013684 222 GHPPDEKVPVSSL-VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTM 300 (438)
Q Consensus 222 ~~~g~~~~~l~~~-~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 300 (438)
..+++ .+...-. .+++++|+|||+||++|+.+.|.+.++++++++. ..++.|+.|+++.+.
T Consensus 16 ~Lt~~-~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~-------~~~v~~~~VD~d~d~---------- 77 (519)
T 3t58_A 16 LLDAD-SVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDW-------RPALNLAVLDCAEET---------- 77 (519)
T ss_dssp EECTT-THHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGG-------TTTEEEEEEETTSGG----------
T ss_pred ECChH-HHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCc-------CCcEEEEEEECCccc----------
Confidence 44555 4433222 3689999999999999999999999999999863 236899999987532
Q ss_pred CCcccccCCchhHHHHHhcCcCceeeEEEECC---CCcEEEc
Q 013684 301 PWLALPFGDPTIKELTKYFDVQGIPCLVIIGP---EGKTVTK 339 (438)
Q Consensus 301 ~~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~---~G~i~~~ 339 (438)
..++++.|+|.++||++++++ +|+.+..
T Consensus 78 -----------~~~l~~~~~V~~~PTl~~f~~g~~~G~~~~~ 108 (519)
T 3t58_A 78 -----------NSAVCREFNIAGFPTVRFFQAFTKNGSGATL 108 (519)
T ss_dssp -----------GHHHHHHTTCCSBSEEEEECTTCCSCCCEEE
T ss_pred -----------cHHHHHHcCCcccCEEEEEcCcccCCCceeE
Confidence 478999999999999999986 6654443
No 361
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.19 E-value=2.6e-11 Score=115.50 Aligned_cols=71 Identities=14% Similarity=0.301 Sum_probs=62.1
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
+||+|+|+||++||++|+.+.|.|.++++++++ ++.++.|++|.. ..+++.|+
T Consensus 25 ~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~---~~~~~~vd~~~~------------------------~~~~~~~~ 77 (287)
T 3qou_A 25 MTTPVLFYFWSERSQHCLQLTPILESLAAQYNG---QFILAKLDCDAE------------------------QMIAAQFG 77 (287)
T ss_dssp TTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS---SSEEEEEETTTC------------------------HHHHHTTT
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC---CeEEEEEeCccC------------------------HHHHHHcC
Confidence 489999999999999999999999999999975 388888887754 67889999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
|.++||++++ + +|+++.+
T Consensus 78 v~~~Pt~~~~-~---~G~~~~~ 95 (287)
T 3qou_A 78 LRAIPTVYLF-Q---NGQPVDG 95 (287)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CCCCCeEEEE-E---CCEEEEE
Confidence 9999999999 4 8877653
No 362
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.19 E-value=9.7e-12 Score=104.58 Aligned_cols=75 Identities=16% Similarity=0.313 Sum_probs=57.8
Q ss_pred eccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHH
Q 013684 65 KVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKAL 144 (438)
Q Consensus 65 ~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l 144 (438)
.+++.+||+++|+||++||++|+.+.|.|.++++++ ++.++.|+.|.. ..+
T Consensus 34 ~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-----~v~~~~vd~~~~------------------------~~l 84 (133)
T 3cxg_A 34 VFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-----YVTLVDIDVDIH------------------------PKL 84 (133)
T ss_dssp HHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-----ECEEEEEETTTC------------------------HHH
T ss_pred HHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-----CEEEEEEeccch------------------------HHH
Confidence 355667899999999999999999999998877654 256666655532 678
Q ss_pred hhhcCcCccceEEEe-cCCCCCCC--cccc
Q 013684 145 NRKFDIEGIPCLVVL-QPYDDKDD--ATLH 171 (438)
Q Consensus 145 ~~~~~v~~~P~~~lv-d~~~~~G~--v~~~ 171 (438)
++.|+|.++|+++++ ++ +|+ ++.+
T Consensus 85 ~~~~~v~~~Pt~~~~~~~---~g~g~~~~~ 111 (133)
T 3cxg_A 85 NDQHNIKALPTFEFYFNL---NNEWVLVHT 111 (133)
T ss_dssp HHHTTCCSSSEEEEEEEE---TTEEEEEEE
T ss_pred HHhcCCCCCCEEEEEEec---CCCeEEEEE
Confidence 899999999999999 44 554 5544
No 363
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.18 E-value=3.4e-11 Score=98.33 Aligned_cols=70 Identities=17% Similarity=0.346 Sum_probs=59.7
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
+||+++|+||++||++|+.+.|.|.+++++++ ++.++.|++|.. .++++.|+
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~----~v~~~~vd~~~~------------------------~~l~~~~~ 80 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYP----DVRFVKCDVDES------------------------PDIAKECE 80 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCT----TSEEEEEETTTC------------------------HHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CCEEEEEECCCC------------------------HHHHHHCC
Confidence 57999999999999999999999999998874 277888877644 57889999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
+.++|+++++ + +|+++.+
T Consensus 81 v~~~Pt~~~~-~---~G~~~~~ 98 (114)
T 2oe3_A 81 VTAMPTFVLG-K---DGQLIGK 98 (114)
T ss_dssp CCSBSEEEEE-E---TTEEEEE
T ss_pred CCcccEEEEE-e---CCeEEEE
Confidence 9999998887 5 8887654
No 364
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.18 E-value=2.5e-12 Score=107.10 Aligned_cols=71 Identities=28% Similarity=0.536 Sum_probs=60.6
Q ss_pred cCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhH
Q 013684 234 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 313 (438)
Q Consensus 234 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 313 (438)
..|++++|+||++||++|+.+.|.|.++.++++ ++.++.|++|.. .
T Consensus 34 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-----------~v~~~~v~~~~~-----------------------~ 79 (130)
T 1wmj_A 34 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-----------GAVFLKVDVDEL-----------------------K 79 (130)
T ss_dssp TTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-----------TBCCEECCTTTS-----------------------G
T ss_pred hcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-----------CCEEEEEeccch-----------------------H
Confidence 358999999999999999999999999988764 367888877644 5
Q ss_pred HHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 314 ELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 314 ~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.+++.|+|.++|+++++ ++|+++.+
T Consensus 80 ~~~~~~~v~~~Pt~~~~-~~g~~~~~ 104 (130)
T 1wmj_A 80 EVAEKYNVEAMPTFLFI-KDGAEADK 104 (130)
T ss_dssp GGHHHHTCCSSCCCCBC-TTTTCCBC
T ss_pred HHHHHcCCCccceEEEE-eCCeEEEE
Confidence 68899999999998888 89998766
No 365
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.18 E-value=5e-12 Score=103.03 Aligned_cols=75 Identities=13% Similarity=0.151 Sum_probs=55.3
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
+...+||+|||+||++|+.+.+.+...++..... ..+.++.|+++.+. ...
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~--------~~~~l~~vdv~~~~---------------------~~~ 67 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEG--------RAAPVQRLQMRDPL---------------------PPG 67 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHH--------HHSCEEEEETTSCC---------------------CTT
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhc--------ccceEEEEECCCCC---------------------chh
Confidence 4568999999999999999987655443321110 13578888888652 145
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
++..|+|.++||+++++ +|+.+.+
T Consensus 68 la~~~~V~g~PT~i~f~-~G~ev~R 91 (116)
T 3dml_A 68 LELARPVTFTPTFVLMA-GDVESGR 91 (116)
T ss_dssp CBCSSCCCSSSEEEEEE-TTEEEEE
T ss_pred HHHHCCCCCCCEEEEEE-CCEEEee
Confidence 67889999999999996 9999987
No 366
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.18 E-value=3e-11 Score=104.45 Aligned_cols=71 Identities=17% Similarity=0.360 Sum_probs=61.7
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+++++|+||++||++|+.+.|.|.+++++++++ +.++.|+.|.. ..+++.|+
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~---v~~~~vd~~~~------------------------~~l~~~~~ 115 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ---VRLAKIDTQAH------------------------PAVAGRHR 115 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT---CEEEEEETTTS------------------------THHHHHTT
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC---EEEEEEeCCcc------------------------HHHHHHcC
Confidence 5789999999999999999999999999998643 88888887744 56889999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
|.++|+++++ + +|+++.+
T Consensus 116 i~~~Pt~~~~-~---~G~~~~~ 133 (155)
T 2ppt_A 116 IQGIPAFILF-H---KGRELAR 133 (155)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CCcCCEEEEE-e---CCeEEEE
Confidence 9999999999 5 8887754
No 367
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.18 E-value=2.6e-11 Score=97.70 Aligned_cols=73 Identities=14% Similarity=0.315 Sum_probs=60.4
Q ss_pred CCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCc
Q 013684 71 GKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDI 150 (438)
Q Consensus 71 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v 150 (438)
+++++|+||++||++|+.+.|.|.++++++.....++.++.|+.|.. ..+++.|+|
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~------------------------~~l~~~~~v 76 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAE------------------------RNICSKYSV 76 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTC------------------------HHHHHHTTC
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecccc------------------------HhHHHhcCC
Confidence 78999999999999999999999999988765433578887776644 578899999
Q ss_pred CccceEEEecCCCCCCCcccc
Q 013684 151 EGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 151 ~~~P~~~lvd~~~~~G~v~~~ 171 (438)
.++|+++++. +|+++.+
T Consensus 77 ~~~Pt~~~~~----~g~~~~~ 93 (111)
T 3uvt_A 77 RGYPTLLLFR----GGKKVSE 93 (111)
T ss_dssp CSSSEEEEEE----TTEEEEE
T ss_pred CcccEEEEEe----CCcEEEe
Confidence 9999999984 7876544
No 368
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.18 E-value=3.3e-11 Score=99.17 Aligned_cols=69 Identities=17% Similarity=0.224 Sum_probs=59.6
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+++++|+||++||++|+.+.|.|.++++++++ ++.++.|++|.. ..+++.|+
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~---~~~~~~vd~~~~------------------------~~~~~~~~ 72 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG---KVRAGKVDCQAY------------------------PQTCQKAG 72 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT---TCEEEEEETTTC------------------------HHHHHHTT
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEeCcCC------------------------HHHHHHcC
Confidence 478999999999999999999999999999865 388888877754 56888999
Q ss_pred cCccceEEEecCCCCCCCc
Q 013684 150 IEGIPCLVVLQPYDDKDDA 168 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v 168 (438)
|.++|++++++. +|.+
T Consensus 73 v~~~Pt~~~~~~---~~~~ 88 (122)
T 3aps_A 73 IKAYPSVKLYQY---ERAK 88 (122)
T ss_dssp CCSSSEEEEEEE---EGGG
T ss_pred CCccceEEEEeC---CCcc
Confidence 999999999986 6653
No 369
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.17 E-value=1.5e-11 Score=104.63 Aligned_cols=90 Identities=11% Similarity=0.101 Sum_probs=59.8
Q ss_pred CCEEEEEEecCC--ChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEE--EEEEecCCCHHHHHHHHhcCCCcccccCCch
Q 013684 236 GKTVGLYFSARW--CIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFE--VVFVSTDRDQTSFESYFGTMPWLALPFGDPT 311 (438)
Q Consensus 236 gk~vll~F~a~w--C~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~--vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~ 311 (438)
++.++|+|+++| |++|+.+.|.|.+++++| ++ +. ++.|++|.
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~----------v~~~~~~Vd~d~----------------------- 79 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQ----------FDWQVAVADLEQ----------------------- 79 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TT----------SCCEEEEECHHH-----------------------
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cc----------cceeEEEEECCC-----------------------
Confidence 345788899877 999999999999999988 43 66 77777653
Q ss_pred hHHHHHhcCcCceeeEEEECCCCcEEEcccchhhhhccccCCCCCHHHHHHHHHHHHHHhccC
Q 013684 312 IKELTKYFDVQGIPCLVIIGPEGKTVTKQGRNLINLYQENAYPFTEAKLEFLEKQMEEEAKNL 374 (438)
Q Consensus 312 ~~~l~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~i~~~~~~~ 374 (438)
..++++.|+|.++||++++ ++|+++.+. .|.. +. ++|.+.|++.+...
T Consensus 80 ~~~la~~~~V~~iPT~~~f-k~G~~v~~~-------~G~~----~~---~~l~~~i~~~l~~~ 127 (142)
T 2es7_A 80 SEAIGDRFNVRRFPATLVF-TDGKLRGAL-------SGIH----PW---AELLTLMRSIVDTP 127 (142)
T ss_dssp HHHHHHTTTCCSSSEEEEE-SCC----CE-------ESCC----CH---HHHHHHHHHHHC--
T ss_pred CHHHHHhcCCCcCCeEEEE-eCCEEEEEE-------eCCC----CH---HHHHHHHHHHhccc
Confidence 2678999999999999999 999998763 3421 22 45666666655443
No 370
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=4.3e-11 Score=99.95 Aligned_cols=72 Identities=19% Similarity=0.416 Sum_probs=59.3
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcC-CCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhc
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNN-GSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKF 148 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 148 (438)
.+++++|+||++||++|+.+.|.|.++++++++. +.++.++.|+.|.. ..+++.|
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~------------------------~~l~~~~ 79 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVN------------------------QVLASRY 79 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTC------------------------CHHHHHH
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCC------------------------HHHHHhC
Confidence 4789999999999999999999999999999731 11388888877643 5788899
Q ss_pred CcCccceEEEecCCCCCCCcc
Q 013684 149 DIEGIPCLVVLQPYDDKDDAT 169 (438)
Q Consensus 149 ~v~~~P~~~lvd~~~~~G~v~ 169 (438)
+|.++|++++++ +|+.+
T Consensus 80 ~v~~~Pt~~~~~----~g~~~ 96 (133)
T 1x5d_A 80 GIRGFPTIKIFQ----KGESP 96 (133)
T ss_dssp TCCSSSEEEEEE----TTEEE
T ss_pred CCCeeCeEEEEe----CCCce
Confidence 999999999998 45544
No 371
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.17 E-value=3.2e-11 Score=97.52 Aligned_cols=70 Identities=17% Similarity=0.271 Sum_probs=60.2
Q ss_pred CCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCc
Q 013684 71 GKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDI 150 (438)
Q Consensus 71 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v 150 (438)
+|+++|+||++||++|+.+.|.|.++++++++ ++.++.|+.|.. ..+++.|++
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~------------------------~~~~~~~~v 76 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG---KVIFLKVDVDAV------------------------AAVAEAAGI 76 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TSEEEEEETTTT------------------------HHHHHHHTC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC---CeEEEEEECCch------------------------HHHHHHcCC
Confidence 79999999999999999999999999998854 388888877643 678899999
Q ss_pred CccceEEEecCCCCCCCcccc
Q 013684 151 EGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 151 ~~~P~~~lvd~~~~~G~v~~~ 171 (438)
.++|+++++ + +|+++.+
T Consensus 77 ~~~Pt~~~~-~---~G~~~~~ 93 (112)
T 1ep7_A 77 TAMPTFHVY-K---DGVKADD 93 (112)
T ss_dssp CBSSEEEEE-E---TTEEEEE
T ss_pred CcccEEEEE-E---CCeEEEE
Confidence 999998777 5 8887754
No 372
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.17 E-value=2.8e-11 Score=102.19 Aligned_cols=72 Identities=18% Similarity=0.365 Sum_probs=62.0
Q ss_pred cCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhc
Q 013684 69 LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKF 148 (438)
Q Consensus 69 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 148 (438)
.+||+++|+||++||++|+.+.|.|.++++++. ++.++.|++|.. .++++.|
T Consensus 44 ~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~----~v~~~~v~~~~~------------------------~~~~~~~ 95 (139)
T 3d22_A 44 RDGKIVLANFSARWCGPSRQIAPYYIELSENYP----SLMFLVIDVDEL------------------------SDFSASW 95 (139)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTS------------------------HHHHHHT
T ss_pred hcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CCEEEEEeCccc------------------------HHHHHHc
Confidence 468999999999999999999999999998873 388888887744 6788999
Q ss_pred CcCccceEEEecCCCCCCCccccc
Q 013684 149 DIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 149 ~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
+|.++|+++++ + +|+++.+.
T Consensus 96 ~v~~~Pt~~~~-~---~G~~~~~~ 115 (139)
T 3d22_A 96 EIKATPTFFFL-R---DGQQVDKL 115 (139)
T ss_dssp TCCEESEEEEE-E---TTEEEEEE
T ss_pred CCCcccEEEEE-c---CCeEEEEE
Confidence 99999999988 6 99887553
No 373
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.17 E-value=5.9e-11 Score=95.49 Aligned_cols=73 Identities=12% Similarity=0.155 Sum_probs=62.4
Q ss_pred CCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHH
Q 013684 236 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 315 (438)
Q Consensus 236 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 315 (438)
+++++|+|+|+|||+|+...|.++++.+. + ++.++.|.+|...+ ...++
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~--~----------~v~~~~vdVde~r~-------------------~Sn~I 72 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE--R----------DMDGYYLIVQQERD-------------------LSDYI 72 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH--H----------TCCEEEEEGGGGHH-------------------HHHHH
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc--C----------CceEEEEEeecCch-------------------hhHHH
Confidence 78999999999999999999999999874 2 47899999886531 12568
Q ss_pred HHhcCcC-ceeeEEEECCCCcEEEcc
Q 013684 316 TKYFDVQ-GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 316 ~~~~~v~-~~P~~~lid~~G~i~~~~ 340 (438)
++.|||+ ..|+++++ ++|+++.+.
T Consensus 73 A~~~~V~h~sPq~il~-k~G~~v~~~ 97 (112)
T 3iv4_A 73 AKKTNVKHESPQAFYF-VNGEMVWNR 97 (112)
T ss_dssp HHHHTCCCCSSEEEEE-ETTEEEEEE
T ss_pred HHHhCCccCCCeEEEE-ECCEEEEEe
Confidence 9999999 59999999 999999875
No 374
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.17 E-value=2.6e-11 Score=99.65 Aligned_cols=87 Identities=16% Similarity=0.280 Sum_probs=66.2
Q ss_pred CCCCCEEecc-cc--CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCccccc
Q 013684 58 KEIGEEVKVS-DL--EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVP 134 (438)
Q Consensus 58 ~~~g~~v~l~-~~--~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~ 134 (438)
+.+|+...+. .+ .+++++|+||++||++|+.+.|.|.++++++ . ++.++.|++|..
T Consensus 7 ~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~--~v~~~~vd~~~~----------------- 65 (118)
T 2f51_A 7 HFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--K--DVTFIKVDVDKN----------------- 65 (118)
T ss_dssp EECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--T--TSEEEEEETTTC-----------------
T ss_pred EecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--C--CeEEEEEECCCC-----------------
Confidence 4455444444 22 4899999999999999999999999999987 2 388888887754
Q ss_pred CCChHHHHHHhhhcCcCccceEEEecCCCCCCCccccc
Q 013684 135 YSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 135 ~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
..+++.|+|.++|++++++....+|+++.+.
T Consensus 66 -------~~~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~ 96 (118)
T 2f51_A 66 -------GNAADAYGVSSIPALFFVKKEGNEIKTLDQF 96 (118)
T ss_dssp -------HHHHHHTTCCSSSEEEEEEEETTEEEEEEEE
T ss_pred -------HHHHHhcCCCCCCEEEEEeCCCCcceEEEee
Confidence 5788999999999999997300116666543
No 375
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=5.2e-11 Score=98.73 Aligned_cols=67 Identities=19% Similarity=0.272 Sum_probs=57.9
Q ss_pred CEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcC
Q 013684 72 KVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIE 151 (438)
Q Consensus 72 k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~ 151 (438)
+.++|+||++||++|+.+.|.|.++++++++.+ +.++.|++|.. ..+++.|+|.
T Consensus 23 ~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~--v~~~~vd~~~~------------------------~~~~~~~~v~ 76 (126)
T 1x5e_A 23 GDWMIEFYAPWCPACQNLQPEWESFAEWGEDLE--VNIAKVDVTEQ------------------------PGLSGRFIIN 76 (126)
T ss_dssp SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGGT--CEEEEEETTTC------------------------HHHHHHTTCC
T ss_pred CCEEEEEECCCCHHHHHHhHHHHHHHHHhccCC--eEEEEEECcCC------------------------HHHHHHcCCc
Confidence 349999999999999999999999999987643 88888877644 5688999999
Q ss_pred ccceEEEecCCCCCCCc
Q 013684 152 GIPCLVVLQPYDDKDDA 168 (438)
Q Consensus 152 ~~P~~~lvd~~~~~G~v 168 (438)
++|+++++ + +|++
T Consensus 77 ~~Pt~~~~-~---~G~~ 89 (126)
T 1x5e_A 77 ALPTIYHC-K---DGEF 89 (126)
T ss_dssp SSSEEEEE-E---TTEE
T ss_pred ccCEEEEE-e---CCeE
Confidence 99999999 6 8875
No 376
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.16 E-value=3.9e-11 Score=99.76 Aligned_cols=70 Identities=19% Similarity=0.381 Sum_probs=60.4
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
++++++|+||++||++|+.+.|.|.++++++. ++.++.|++|.. .++++.|+
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~d~~------------------------~~l~~~~~ 87 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP----TVKFAKVDADNN------------------------SEIVSKCR 87 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT----TSEEEEEETTTC------------------------HHHHHHTT
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC----CCEEEEEECCCC------------------------HHHHHHcC
Confidence 67999999999999999999999999999872 388888887754 57889999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
|.++|+++++ + +|+++.+
T Consensus 88 v~~~Pt~~i~-~---~G~~~~~ 105 (125)
T 1r26_A 88 VLQLPTFIIA-R---SGKMLGH 105 (125)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CCcccEEEEE-e---CCeEEEE
Confidence 9999998887 5 8887654
No 377
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.16 E-value=7.2e-11 Score=94.26 Aligned_cols=73 Identities=25% Similarity=0.460 Sum_probs=61.4
Q ss_pred ccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhh
Q 013684 68 DLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRK 147 (438)
Q Consensus 68 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~ 147 (438)
+.++++++|+||++||++|+.+.|.|.+++++++. ++.++.|+.|.. ..+++.
T Consensus 17 ~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~------------------------~~~~~~ 69 (106)
T 1xwb_A 17 KASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD---NVVVLKVDVDEC------------------------EDIAME 69 (106)
T ss_dssp HHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTC------------------------HHHHHH
T ss_pred hcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC---CeEEEEEeccch------------------------HHHHHH
Confidence 34689999999999999999999999999998752 488888887644 578899
Q ss_pred cCcCccceEEEecCCCCCCCcccc
Q 013684 148 FDIEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 148 ~~v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
|++.++|+++++ + +|+++.+
T Consensus 70 ~~v~~~Pt~~~~-~---~G~~~~~ 89 (106)
T 1xwb_A 70 YNISSMPTFVFL-K---NGVKVEE 89 (106)
T ss_dssp TTCCSSSEEEEE-E---TTEEEEE
T ss_pred cCCCcccEEEEE-c---CCcEEEE
Confidence 999999998777 4 8877654
No 378
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.16 E-value=2.5e-11 Score=99.33 Aligned_cols=73 Identities=21% Similarity=0.410 Sum_probs=60.4
Q ss_pred cccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhh
Q 013684 67 SDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 146 (438)
Q Consensus 67 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 146 (438)
.+.+||+++|+||++||++|+.+.|.|.++++++ ++.++.|+.|.. ..+++
T Consensus 29 ~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-----~~~~~~vd~~~~------------------------~~~~~ 79 (117)
T 2xc2_A 29 EQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY-----DAIFVKVDVDKL------------------------EETAR 79 (117)
T ss_dssp HHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-----SSEEEEEETTTS------------------------HHHHH
T ss_pred HhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-----CcEEEEEECCcc------------------------HHHHH
Confidence 3347899999999999999999999999988876 377888877643 67889
Q ss_pred hcCcCccceEEEecCCCCCCCccccc
Q 013684 147 KFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 147 ~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
.|+|.++|+++++ + +|+++.+.
T Consensus 80 ~~~v~~~Pt~~~~-~---~G~~~~~~ 101 (117)
T 2xc2_A 80 KYNISAMPTFIAI-K---NGEKVGDV 101 (117)
T ss_dssp HTTCCSSSEEEEE-E---TTEEEEEE
T ss_pred HcCCCccceEEEE-e---CCcEEEEE
Confidence 9999999998887 5 88876543
No 379
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.15 E-value=1.3e-11 Score=108.39 Aligned_cols=91 Identities=15% Similarity=0.095 Sum_probs=62.9
Q ss_pred CCCCEEeccccCCCEEEEEEeccCCccchhhHHH---HHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccC
Q 013684 59 EIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGV---LVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPY 135 (438)
Q Consensus 59 ~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~---l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~ 135 (438)
...+.+.....+||+|||+|||+||++|+.+.|. ..++.+.+++. +.++.|+.|+.++-...|.
T Consensus 27 ~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~---fv~ikVD~de~~~l~~~y~---------- 93 (173)
T 3ira_A 27 WGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEA---FVSIKVDREERPDIDNIYM---------- 93 (173)
T ss_dssp SSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHH---CEEEEEETTTCHHHHHHHH----------
T ss_pred cCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhc---CceeeeCCcccCcHHHHHH----------
Confidence 3344455555679999999999999999999883 24566666542 7777777665543211111
Q ss_pred CChHHHHHHhhhcCcCccceEEEecCCCCCCCcccc
Q 013684 136 SDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 136 ~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
..+...+++.++|+++++++ +|+++..
T Consensus 94 ------~~~q~~~gv~g~Pt~v~l~~---dG~~v~~ 120 (173)
T 3ira_A 94 ------TVCQIILGRGGWPLNIIMTP---GKKPFFA 120 (173)
T ss_dssp ------HHHHHHHSCCCSSEEEEECT---TSCEEEE
T ss_pred ------HHHHHHcCCCCCcceeeECC---CCCceee
Confidence 11222359999999999999 9998865
No 380
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.15 E-value=4.9e-11 Score=98.14 Aligned_cols=70 Identities=23% Similarity=0.487 Sum_probs=59.8
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
++|+++|+||++||++|+.+.|.|.+++++++ ++.++.|+.|.. ..+++.|+
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~vd~~~~------------------------~~~~~~~~ 84 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFP----NAVFLKVDVDEL------------------------KPIAEQFS 84 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTC------------------------HHHHHHTT
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC----CcEEEEEECCCC------------------------HHHHHHcC
Confidence 58999999999999999999999999998874 377888877754 67889999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
+.++|+++++ + +|+++.+
T Consensus 85 v~~~Pt~~~~-~---~G~~~~~ 102 (122)
T 2vlu_A 85 VEAMPTFLFM-K---EGDVKDR 102 (122)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CCcccEEEEE-e---CCEEEEE
Confidence 9999998887 5 8887754
No 381
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.15 E-value=1.6e-11 Score=108.79 Aligned_cols=119 Identities=10% Similarity=0.162 Sum_probs=91.0
Q ss_pred HhhccchhHHHHHhhcccccC--C---------CC----CEEeccc-cCCCEEEEEEe-ccCCccch-hhHHHHHHHHHH
Q 013684 38 LIMSLSQWYVQQLRRRMTSTK--E---------IG----EEVKVSD-LEGKVTALYFS-ANWYPPCG-NFTGVLVDVYEE 99 (438)
Q Consensus 38 ~~g~~~p~f~~~~~~~~~~~~--~---------~g----~~v~l~~-~~gk~vll~F~-a~wC~~C~-~~~p~l~~l~~~ 99 (438)
.+|+.+|+|+ +.+ . +| +.+++++ ++||+++|+|| +.|||.|. .+++.+++.+++
T Consensus 2 ~vGd~aPdf~--------l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~ 73 (182)
T 1xiy_A 2 KENDLIPNVK--------VMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDY 73 (182)
T ss_dssp CTTCBCCCCE--------EEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHH
T ss_pred CCCCCCCCeE--------EEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHH
Confidence 3799999999 766 3 67 7899998 69998888777 89999999 999999999999
Q ss_pred H-hcCCCCE-EEEEEecCCCHHHHHHhHhcCCccccc-CCChHHHHHHhhhcCcC-----------ccceEEEecCCCCC
Q 013684 100 L-RNNGSDF-EVVFVSSDEDLNAFNNYRACMPWLAVP-YSDLETKKALNRKFDIE-----------GIPCLVVLQPYDDK 165 (438)
Q Consensus 100 ~-~~~~~~~-~iv~vs~D~~~~~~~~~~~~~~~~~~~-~~d~~~~~~l~~~~~v~-----------~~P~~~lvd~~~~~ 165 (438)
| +..| + .|++||.| +....++|.++.+...++ .+|.+ .++++.||+. ..+.++||+ +
T Consensus 74 f~~~~g--~~~V~gvS~D-~~~~~~~~~~~~~~~~f~lLsD~~--~~~a~~yGv~~~~~~~G~g~~~~R~tfvId----d 144 (182)
T 1xiy_A 74 FIKENN--FDDIYCITNN-DIYVLKSWFKSMDIKKIKYISDGN--SSFTDSMNMLVDKSNFFMGMRPWRFVAIVE----N 144 (182)
T ss_dssp HHTTSC--CSEEEEEESS-CHHHHHHHHHHTTCCSSEEEECTT--SHHHHHTTCEEECGGGTCCEEECCEEEEEE----T
T ss_pred HHHhCC--CcEEEEEeCC-CHHHHHHHHHHcCCCCceEEEeCc--hHHHHHhCCceeccccCCCCceEEEEEEEc----C
Confidence 9 8876 8 49999999 555566666655532122 33544 7889999873 256788996 8
Q ss_pred CCcccccc
Q 013684 166 DDATLHDG 173 (438)
Q Consensus 166 G~v~~~~~ 173 (438)
|+|++...
T Consensus 145 G~V~~~~v 152 (182)
T 1xiy_A 145 NILVKMFQ 152 (182)
T ss_dssp TEEEEEEE
T ss_pred CEEEEEEE
Confidence 99887654
No 382
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.15 E-value=6.7e-11 Score=94.78 Aligned_cols=71 Identities=17% Similarity=0.392 Sum_probs=61.4
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+++++|+||++||++|+.+.|.|.++++++++ ++.++.|+.|.+ ..+++.|+
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~v~~~~~------------------------~~~~~~~~ 69 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG---KLLVAKLDVDEN------------------------PKTAMRYR 69 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT---TBEEEEEETTTC------------------------HHHHHHTT
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC---ceEEEEEECCCC------------------------HhHHHhCC
Confidence 478999999999999999999999999998864 388888887754 57888999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
+.++|+++++ + +|+++.+
T Consensus 70 v~~~Pt~~~~-~---~g~~~~~ 87 (109)
T 2yzu_A 70 VMSIPTVILF-K---DGQPVEV 87 (109)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CCcCCEEEEE-e---CCcEeee
Confidence 9999999999 6 8887654
No 383
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.15 E-value=4.1e-11 Score=97.08 Aligned_cols=71 Identities=20% Similarity=0.286 Sum_probs=59.8
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
++++++|+||++||++|+.+.|.|.++.+++. ++.++.|+.|.. .++++.|+
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~----~v~~~~vd~~~~------------------------~~l~~~~~ 69 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP----QVAISSVDSEAR------------------------PELMKELG 69 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT----TSCEEEEEGGGC------------------------HHHHHHTT
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC----CcEEEEEcCcCC------------------------HHHHHHcC
Confidence 57899999999999999999999999887763 377887776643 67889999
Q ss_pred cCccceEEEecCCCCCCCccccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
+.++|+++++ + +|+++.+.
T Consensus 70 v~~~Pt~~~~-~---~G~~v~~~ 88 (110)
T 2l6c_A 70 FERVPTLVFI-R---DGKVAKVF 88 (110)
T ss_dssp CCSSCEEEEE-E---SSSEEEEE
T ss_pred CcccCEEEEE-E---CCEEEEEE
Confidence 9999999999 6 89887653
No 384
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.15 E-value=3.3e-12 Score=111.59 Aligned_cols=82 Identities=15% Similarity=0.253 Sum_probs=61.7
Q ss_pred CEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHH
Q 013684 62 EEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETK 141 (438)
Q Consensus 62 ~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~ 141 (438)
+.+.....+||+|+|+|||+||++|+.+.|.|.++.+..... +.++.|++|.+.+
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~---~~~~~v~~d~~~~---------------------- 91 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELS---HNFVMVNLEDEEE---------------------- 91 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHH---TTSEEEEEEGGGS----------------------
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcC---CeEEEEEecCCch----------------------
Confidence 345556667999999999999999999999999977665432 5567777764422
Q ss_pred HHHhhhcCc--CccceEEEecCCCCCCCccccc
Q 013684 142 KALNRKFDI--EGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 142 ~~l~~~~~v--~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
.+...|++ ..+|+++++|+ +|+++.+.
T Consensus 92 -~~~~~~~~~~~~~Pt~~~~d~---~G~~~~~~ 120 (164)
T 1sen_A 92 -PKDEDFSPDGGYIPRILFLDP---SGKVHPEI 120 (164)
T ss_dssp -CSCGGGCTTCSCSSEEEEECT---TSCBCTTC
T ss_pred -HHHHHhcccCCcCCeEEEECC---CCCEEEEE
Confidence 13455666 66999999999 99988653
No 385
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.15 E-value=6.3e-11 Score=94.43 Aligned_cols=83 Identities=17% Similarity=0.276 Sum_probs=64.9
Q ss_pred CCCCCEEeccc-cCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCC
Q 013684 58 KEIGEEVKVSD-LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYS 136 (438)
Q Consensus 58 ~~~g~~v~l~~-~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~ 136 (438)
+.+++.+.... -.+++++|+||++||++|+.+.|.|.++++++++ ++.++.|+.|..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~------------------- 61 (105)
T 1fb6_A 4 DVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG---KIAVYKLNTDEA------------------- 61 (105)
T ss_dssp ECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTC-------------------
T ss_pred echhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC---ceEEEEEcCcch-------------------
Confidence 44444443322 2478999999999999999999999999998864 388888877644
Q ss_pred ChHHHHHHhhhcCcCccceEEEecCCCCCCCcccc
Q 013684 137 DLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 137 d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
..+++.|++.++|+++++ + +|+++.+
T Consensus 62 -----~~~~~~~~v~~~Pt~~~~-~---~g~~~~~ 87 (105)
T 1fb6_A 62 -----PGIATQYNIRSIPTVLFF-K---NGERKES 87 (105)
T ss_dssp -----HHHHHHTTCCSSSEEEEE-E---TTEEEEE
T ss_pred -----HHHHHhCCCCcccEEEEE-e---CCeEEEE
Confidence 578899999999998888 5 8887654
No 386
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.14 E-value=5e-11 Score=102.65 Aligned_cols=70 Identities=17% Similarity=0.436 Sum_probs=60.6
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
++|+++|+||++||++|+.+.|.|.++++++. ++.++.|++|.. ..+++.|+
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~----~v~~~~vd~~~~------------------------~~l~~~~~ 82 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP----QVSFVKLEAEGV------------------------PEVSEKYE 82 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTS------------------------HHHHHHTT
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC----CeEEEEEECCCC------------------------HHHHHHcC
Confidence 48999999999999999999999999998862 488888877754 57889999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
|.++|++++++ +|+++.+
T Consensus 83 v~~~Pt~~~~~----~G~~~~~ 100 (153)
T 2wz9_A 83 ISSVPTFLFFK----NSQKIDR 100 (153)
T ss_dssp CCSSSEEEEEE----TTEEEEE
T ss_pred CCCCCEEEEEE----CCEEEEE
Confidence 99999999998 7877654
No 387
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.14 E-value=5.6e-11 Score=97.37 Aligned_cols=75 Identities=20% Similarity=0.458 Sum_probs=59.2
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.|++++|+||++|||+|+.+.|.|.+++++++ ..+++++++... +.+....+++.|+
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~-----~~v~~~~~~~~~------------------~~~~~~~~~~~~~ 84 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETK-----AHIYFINSEEPS------------------QLNDLQAFRSRYG 84 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC-----CCCEEEETTCGG------------------GHHHHHHHHHHHT
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcC-----CeEEEEECCCcC------------------cHHHHHHHHHHcC
Confidence 57899999999999999999999999998874 336667666432 1222368889999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
|.++|++++++ +|+++.+
T Consensus 85 i~~~Pt~~~~~----~G~~~~~ 102 (118)
T 1zma_A 85 IPTVPGFVHIT----DGQINVR 102 (118)
T ss_dssp CCSSCEEEEEE----TTEEEEE
T ss_pred CCCCCeEEEEE----CCEEEEE
Confidence 99999999995 7876644
No 388
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.14 E-value=1.1e-11 Score=101.31 Aligned_cols=72 Identities=19% Similarity=0.420 Sum_probs=59.0
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
++|+++|+||++||++|+.+.|.|.++++++++.+.++.++.|+.+.. ..+++.|+
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~------------------------~~~~~~~~ 78 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEE------------------------SDLAQQYG 78 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTC------------------------CSSHHHHT
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCC------------------------HHHHHHCC
Confidence 579999999999999999999999999999877544566666655532 35678899
Q ss_pred cCccceEEEecCCCCCCCcc
Q 013684 150 IEGIPCLVVLQPYDDKDDAT 169 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~ 169 (438)
+.++|+++++ + +|+.+
T Consensus 79 v~~~Pt~~~~-~---~g~~~ 94 (120)
T 1mek_A 79 VRGYPTIKFF-R---NGDTA 94 (120)
T ss_dssp CCSSSEEEEE-E---SSCSS
T ss_pred CCcccEEEEE-e---CCCcC
Confidence 9999999999 4 77654
No 389
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.14 E-value=1.5e-11 Score=111.75 Aligned_cols=72 Identities=15% Similarity=0.251 Sum_probs=61.9
Q ss_pred cCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhc
Q 013684 69 LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKF 148 (438)
Q Consensus 69 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 148 (438)
..|++++|+||++||++|+.+.|.|.++++++++ ++.++.|++|.. ..+++.|
T Consensus 112 ~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~---~v~~~~vd~~~~------------------------~~l~~~~ 164 (210)
T 3apq_A 112 NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG---LLRIGAVNCGDD------------------------RMLCRMK 164 (210)
T ss_dssp HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT---TBEEEEEETTTC------------------------HHHHHHT
T ss_pred ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC---ceEEEEEECCcc------------------------HHHHHHc
Confidence 4689999999999999999999999999999854 388888877644 5788999
Q ss_pred CcCccceEEEecCCCCCCCcccc
Q 013684 149 DIEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 149 ~v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
+|.++|+++++ + +|+++.+
T Consensus 165 ~v~~~Pt~~~~-~---~G~~~~~ 183 (210)
T 3apq_A 165 GVNSYPSLFIF-R---SGMAAVK 183 (210)
T ss_dssp TCCSSSEEEEE-C---TTSCCEE
T ss_pred CCCcCCeEEEE-E---CCCceeE
Confidence 99999999999 6 8887654
No 390
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.14 E-value=7.7e-11 Score=113.04 Aligned_cols=69 Identities=28% Similarity=0.485 Sum_probs=60.1
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|+|||+||++|+.+.|.+.++++++++. +.++.|++|.+. ...
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~----------~~~~~v~~d~~~---------------------~~~ 82 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV----------VQVAAVNCDLNK---------------------NKA 82 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT----------SEEEEEETTSTT---------------------THH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC----------cEEEEEEccCcc---------------------CHH
Confidence 4789999999999999999999999999998753 789999998542 378
Q ss_pred HHHhcCcCceeeEEEECCCCc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGK 335 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~ 335 (438)
+++.|+|.++||+++++. |+
T Consensus 83 l~~~~~I~~~Pt~~~~~~-g~ 102 (298)
T 3ed3_A 83 LCAKYDVNGFPTLMVFRP-PK 102 (298)
T ss_dssp HHHHTTCCBSSEEEEEEC-CC
T ss_pred HHHhCCCCccceEEEEEC-Cc
Confidence 999999999999999954 54
No 391
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.14 E-value=6.1e-11 Score=94.35 Aligned_cols=73 Identities=19% Similarity=0.434 Sum_probs=61.0
Q ss_pred ccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhh
Q 013684 68 DLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRK 147 (438)
Q Consensus 68 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~ 147 (438)
+.++++++|+||++||++|+.+.|.|.++++++. ++.++.|+.|.. ..+++.
T Consensus 16 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~------------------------~~~~~~ 67 (104)
T 2vim_A 16 ENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP----EVEFAKVDVDQN------------------------EEAAAK 67 (104)
T ss_dssp TTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTC------------------------HHHHHH
T ss_pred hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC----CCEEEEEeccCC------------------------HHHHHH
Confidence 3468999999999999999999999999998874 388888877644 578889
Q ss_pred cCcCccceEEEecCCCCCCCccccc
Q 013684 148 FDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 148 ~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
|++.++|++++++ +|+++.+.
T Consensus 68 ~~v~~~Pt~~~~~----~g~~~~~~ 88 (104)
T 2vim_A 68 YSVTAMPTFVFIK----DGKEVDRF 88 (104)
T ss_dssp TTCCSSSEEEEEE----TTEEEEEE
T ss_pred cCCccccEEEEEe----CCcEEEEE
Confidence 9999999988875 78776543
No 392
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.13 E-value=4.4e-11 Score=109.58 Aligned_cols=69 Identities=20% Similarity=0.382 Sum_probs=56.3
Q ss_pred cCCCEEEEEEecC-CChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchh
Q 013684 234 LVGKTVGLYFSAR-WCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 312 (438)
Q Consensus 234 ~~gk~vll~F~a~-wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~ 312 (438)
.++++++++||++ ||++|+.+.|.+.++++. . +++.++.|+++... .
T Consensus 20 ~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~----------~~v~~~~vd~~~~~---------------------~ 67 (226)
T 1a8l_A 20 MVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-T----------DKLSYEIVDFDTPE---------------------G 67 (226)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-C----------TTEEEEEEETTSHH---------------------H
T ss_pred cCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-C----------CceEEEEEeCCCcc---------------------c
Confidence 4567889999999 999999999999998753 2 25889999887421 2
Q ss_pred HHHHHhcCcCceeeEEEECCCCc
Q 013684 313 KELTKYFDVQGIPCLVIIGPEGK 335 (438)
Q Consensus 313 ~~l~~~~~v~~~P~~~lid~~G~ 335 (438)
.++++.|||.++||++++ ++|+
T Consensus 68 ~~~~~~~~v~~~Pt~~~~-~~g~ 89 (226)
T 1a8l_A 68 KELAKRYRIDRAPATTIT-QDGK 89 (226)
T ss_dssp HHHHHHTTCCSSSEEEEE-ETTB
T ss_pred HHHHHHcCCCcCceEEEE-cCCc
Confidence 678999999999999999 5664
No 393
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.13 E-value=6.4e-11 Score=97.80 Aligned_cols=74 Identities=18% Similarity=0.324 Sum_probs=59.8
Q ss_pred ccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhh
Q 013684 68 DLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRK 147 (438)
Q Consensus 68 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~ 147 (438)
+.+||+++|+||++||++|+.+.|.+.+++++++ ++.++.|+.+.. ..++++.
T Consensus 34 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~----~~~~~~vd~~~~-----------------------~~~~~~~ 86 (124)
T 1faa_A 34 AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL----DVIFLKLDCNQE-----------------------NKTLAKE 86 (124)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEECSST-----------------------THHHHHH
T ss_pred hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC----CCEEEEEecCcc-----------------------hHHHHHH
Confidence 3468999999999999999999999999998874 377777776621 0678899
Q ss_pred cCcCccceEEEecCCCCCCCccccc
Q 013684 148 FDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 148 ~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
|++.++|+++++ + +|+++.+.
T Consensus 87 ~~v~~~Pt~~~~-~---~G~~~~~~ 107 (124)
T 1faa_A 87 LGIRVVPTFKIL-K---ENSVVGEV 107 (124)
T ss_dssp HCCSSSSEEEEE-E---TTEEEEEE
T ss_pred cCCCeeeEEEEE-e---CCcEEEEE
Confidence 999999996665 5 88877553
No 394
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.13 E-value=3.2e-11 Score=99.47 Aligned_cols=72 Identities=19% Similarity=0.361 Sum_probs=61.8
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
++|+++|+||++||++|+.+.|.|.++++++++.+ +.++.|+.|.. ..+++.|+
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~--v~~~~vd~d~~------------------------~~~~~~~~ 85 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDK--VGFYKVDVDEQ------------------------SQIAQEVG 85 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHH--SEEEEEETTTC------------------------HHHHHHHT
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCc--EEEEEEECcCC------------------------HHHHHHcC
Confidence 57899999999999999999999999998887653 88888887754 57889999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
+.++|++++++ +|+++.+
T Consensus 86 v~~~Pt~~~~~----~G~~~~~ 103 (121)
T 2j23_A 86 IRAMPTFVFFK----NGQKIDT 103 (121)
T ss_dssp CCSSSEEEEEE----TTEEEEE
T ss_pred CCcccEEEEEE----CCeEEee
Confidence 99999999885 8877655
No 395
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.13 E-value=3.7e-11 Score=111.52 Aligned_cols=70 Identities=10% Similarity=0.151 Sum_probs=59.0
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
+|++|+|+|||+||++|+.+.|.|.+++++|. ++.|+.|+++. ..
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~-----------~v~f~kVd~d~------------------------~~ 176 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYP-----------MVKFCKIKASN------------------------TG 176 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT-----------TSEEEEEEHHH------------------------HC
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-----------CCEEEEEeCCc------------------------HH
Confidence 48999999999999999999999999998875 46788887642 23
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
+++.|+|.++||++++ ++|+++.+.
T Consensus 177 l~~~~~I~~~PTll~~-~~G~~v~~~ 201 (245)
T 1a0r_P 177 AGDRFSSDVLPTLLVY-KGGELLSNF 201 (245)
T ss_dssp CTTSSCTTTCSEEEEE-ETTEEEEEE
T ss_pred HHHHCCCCCCCEEEEE-ECCEEEEEE
Confidence 5678999999999999 699998763
No 396
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.13 E-value=4.2e-10 Score=110.73 Aligned_cols=67 Identities=16% Similarity=0.301 Sum_probs=55.1
Q ss_pred CEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHHH
Q 013684 237 KTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELT 316 (438)
Q Consensus 237 k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~ 316 (438)
+.++|+|+++||++|+.+.|.+.+++++|+++ +.++.|+++... ...++
T Consensus 136 ~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~----------i~f~~vd~~~~~---------------------~~~~~ 184 (361)
T 3uem_A 136 KTHILLFLPKSVSDYDGKLSNFKTAAESFKGK----------ILFIFIDSDHTD---------------------NQRIL 184 (361)
T ss_dssp CEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT----------CEEEEECTTSGG---------------------GHHHH
T ss_pred CcEEEEEEeCCchhHHHHHHHHHHHHHHccCc----------eEEEEecCChHH---------------------HHHHH
Confidence 57899999999999999999999999999864 667777665322 37789
Q ss_pred HhcCcCc--eeeEEEECCCC
Q 013684 317 KYFDVQG--IPCLVIIGPEG 334 (438)
Q Consensus 317 ~~~~v~~--~P~~~lid~~G 334 (438)
+.|||.+ +|++++++.++
T Consensus 185 ~~fgi~~~~~P~~~~~~~~~ 204 (361)
T 3uem_A 185 EFFGLKKEECPAVRLITLEE 204 (361)
T ss_dssp HHTTCCTTTCSEEEEEECC-
T ss_pred HHcCCCccCCccEEEEEcCC
Confidence 9999988 99999997644
No 397
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.12 E-value=9.5e-11 Score=95.03 Aligned_cols=70 Identities=17% Similarity=0.330 Sum_probs=59.4
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
+||+++|+||++||++|+.+.|.|.+++++++ ++.++.|++|.. ..+++.|+
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~----~v~~~~vd~~~~------------------------~~~~~~~~ 76 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT----KMVFIKVDVDEV------------------------SEVTEKEN 76 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTT------------------------HHHHHHTT
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC----CCEEEEEECCCC------------------------HHHHHHcC
Confidence 58999999999999999999999999998863 388888877644 57888999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
|.++|+++++ + +|+++.+
T Consensus 77 v~~~Pt~~~~-~---~G~~~~~ 94 (112)
T 1syr_A 77 ITSMPTFKVY-K---NGSSVDT 94 (112)
T ss_dssp CCSSSEEEEE-E---TTEEEEE
T ss_pred CCcccEEEEE-E---CCcEEEE
Confidence 9999998777 4 8877654
No 398
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.12 E-value=2e-11 Score=102.60 Aligned_cols=74 Identities=11% Similarity=0.189 Sum_probs=61.9
Q ss_pred CCCEEEEEEeccC--CccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhh
Q 013684 70 EGKVTALYFSANW--YPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRK 147 (438)
Q Consensus 70 ~gk~vll~F~a~w--C~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~ 147 (438)
.+++|||+|||+| |++|+.+.|.|.++++++.++. +.++.|++|.. .+++.+
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~--v~~~KVdvDe~------------------------~~lA~~ 86 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYT--WQVAIADLEQS------------------------EAIGDR 86 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSC--CEEEECCHHHH------------------------HHHHHH
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCe--EEEEEEECCCC------------------------HHHHHH
Confidence 4578999999999 9999999999999999985431 77777755522 789999
Q ss_pred cCcCccceEEEecCCCCCCCcccccc
Q 013684 148 FDIEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 148 ~~v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
|+|.++||++++. +|+++.+..
T Consensus 87 ygV~sIPTlilFk----~G~~v~~~~ 108 (140)
T 2qgv_A 87 FGAFRFPATLVFT----GGNYRGVLN 108 (140)
T ss_dssp HTCCSSSEEEEEE----TTEEEEEEE
T ss_pred cCCccCCEEEEEE----CCEEEEEEe
Confidence 9999999999997 898887644
No 399
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.12 E-value=1e-10 Score=95.96 Aligned_cols=71 Identities=24% Similarity=0.448 Sum_probs=60.7
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+++++|+||++||++|+.+.|.|.++++++++ ++.++.|++|.. ..+++.|+
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~------------------------~~~~~~~~ 81 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERAT---DLTVAKLDVDTN------------------------PETARNFQ 81 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TCEEEEEETTTC------------------------HHHHHHTT
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC---CeEEEEEECCCC------------------------HHHHHhcC
Confidence 478999999999999999999999999998754 388888887754 57889999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
|.++|+++++. +|+++.+
T Consensus 82 i~~~Pt~~~~~----~g~~~~~ 99 (121)
T 2i1u_A 82 VVSIPTLILFK----DGQPVKR 99 (121)
T ss_dssp CCSSSEEEEEE----TTEEEEE
T ss_pred CCcCCEEEEEE----CCEEEEE
Confidence 99999998885 8877654
No 400
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.11 E-value=1e-10 Score=92.70 Aligned_cols=70 Identities=14% Similarity=0.401 Sum_probs=60.3
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
++++++|+||++||++|+.+.|.|.++++++++ +.++.|+.|.. ..+++.|+
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----~~~~~v~~~~~------------------------~~~~~~~~ 66 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ----VGFGKLNSDEN------------------------PDIAARYG 66 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT----SEEEEEETTTC------------------------HHHHHHTT
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC----ceEEEEECCCC------------------------HHHHHhCC
Confidence 579999999999999999999999999888742 77888877644 57889999
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
+.++|+++++ + +|+++.+
T Consensus 67 v~~~Pt~~~~-~---~g~~~~~ 84 (104)
T 2e0q_A 67 VMSLPTVIFF-K---DGEPVDE 84 (104)
T ss_dssp CCSSCEEEEE-E---TTEEEEE
T ss_pred ccccCEEEEE-E---CCeEhhh
Confidence 9999999999 6 8887654
No 401
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.11 E-value=9.6e-11 Score=94.75 Aligned_cols=71 Identities=21% Similarity=0.503 Sum_probs=60.8
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.|++++|+||++||++|+.+.|.|.++.+++. ++.++.|+.|.. ..+++.|+
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~~------------------------~~~~~~~~ 76 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFP----NVTFLKVDVDEL------------------------KAVAEEWN 76 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS----SEEEEEEETTTC------------------------HHHHHHHH
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC----CcEEEEEEcccc------------------------HHHHHhCC
Confidence 58999999999999999999999999988874 388888877644 57788999
Q ss_pred cCccceEEEecCCCCCCCccccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
+.++|+++++ + +|+++.+.
T Consensus 77 v~~~Pt~~~~-~---~G~~~~~~ 95 (113)
T 1ti3_A 77 VEAMPTFIFL-K---DGKLVDKT 95 (113)
T ss_dssp CSSTTEEEEE-E---TTEEEEEE
T ss_pred CCcccEEEEE-e---CCEEEEEE
Confidence 9999999998 5 88877553
No 402
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.11 E-value=1.8e-10 Score=114.50 Aligned_cols=88 Identities=14% Similarity=0.251 Sum_probs=67.2
Q ss_pred CCCCCceeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCC
Q 013684 222 GHPPDEKVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMP 301 (438)
Q Consensus 222 ~~~g~~~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~ 301 (438)
.++++ .+...-..+++++|.|||+||++|+.+.|.+.++++++++.. ....++.++.|+++.+
T Consensus 9 ~l~~~-~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~----~~~~~v~~~~Vd~~~~------------ 71 (382)
T 2r2j_A 9 SLDTE-NIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEF----PNENQVVFARVDCDQH------------ 71 (382)
T ss_dssp BCCTT-THHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC-------CCEEEEEEETTTC------------
T ss_pred ECCHH-HHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhc----CCCCceEEEEEECCcc------------
Confidence 44444 443222247899999999999999999999999999996320 0012488888888755
Q ss_pred CcccccCCchhHHHHHhcCcCceeeEEEECCCCcEEE
Q 013684 302 WLALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTVT 338 (438)
Q Consensus 302 ~~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~ 338 (438)
..+++.|+|.++||++++ ++|+++.
T Consensus 72 -----------~~l~~~~~v~~~Pt~~~f-~~G~~~~ 96 (382)
T 2r2j_A 72 -----------SDIAQRYRISKYPTLKLF-RNGMMMK 96 (382)
T ss_dssp -----------HHHHHHTTCCEESEEEEE-ETTEEEE
T ss_pred -----------HHHHHhcCCCcCCEEEEE-eCCcEee
Confidence 678999999999999999 7888775
No 403
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.11 E-value=1.4e-10 Score=98.04 Aligned_cols=83 Identities=19% Similarity=0.358 Sum_probs=59.9
Q ss_pred CCCCCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCC
Q 013684 58 KEIGEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSD 137 (438)
Q Consensus 58 ~~~g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d 137 (438)
+.+++.+.....+++.++|+||++||++|+.+.|.|.++++++++ ++.++.|++|..
T Consensus 37 ~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~---~v~~~~vd~~~~-------------------- 93 (140)
T 1v98_A 37 EADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAG---RLKVVKVNVDEH-------------------- 93 (140)
T ss_dssp ------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTT---TEEEEEEETTTC--------------------
T ss_pred cCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccC---ceEEEEEECCCC--------------------
Confidence 455555544433443499999999999999999999999999864 388888887754
Q ss_pred hHHHHHHhhhcCcCccceEEEecCCCCCCCcccc
Q 013684 138 LETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 138 ~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
..+++.|++.++|+++++ + +|+++.+
T Consensus 94 ----~~l~~~~~v~~~Pt~~~~-~---~G~~~~~ 119 (140)
T 1v98_A 94 ----PGLAARYGVRSVPTLVLF-R---RGAPVAT 119 (140)
T ss_dssp ----HHHHHHTTCCSSSEEEEE-E---TTEEEEE
T ss_pred ----HHHHHHCCCCccCEEEEE-e---CCcEEEE
Confidence 578899999999999999 5 8887654
No 404
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.10 E-value=1.1e-10 Score=107.17 Aligned_cols=69 Identities=17% Similarity=0.281 Sum_probs=54.9
Q ss_pred CCCEEEEEE----ecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCc
Q 013684 235 VGKTVGLYF----SARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDP 310 (438)
Q Consensus 235 ~gk~vll~F----~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d 310 (438)
.+.++++.| |++||++|+.+.|.+.++++++.+. +++.++.|+++.+
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~--------~~v~~~~vd~~~~--------------------- 70 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQ--------DKIKLDIYSPFTH--------------------- 70 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCT--------TTEEEEEECTTTC---------------------
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCC--------CceEEEEecCccc---------------------
Confidence 344556666 5899999999999999999888532 2588888887755
Q ss_pred hhHHHHHhcCcCceeeEEEECCCCc
Q 013684 311 TIKELTKYFDVQGIPCLVIIGPEGK 335 (438)
Q Consensus 311 ~~~~l~~~~~v~~~P~~~lid~~G~ 335 (438)
.++++.|+|+++||+++++ +|+
T Consensus 71 --~~l~~~~~v~~~Ptl~~~~-~~~ 92 (229)
T 2ywm_A 71 --KEETEKYGVDRVPTIVIEG-DKD 92 (229)
T ss_dssp --HHHHHHTTCCBSSEEEEES-SSC
T ss_pred --HHHHHHcCCCcCcEEEEEC-CCc
Confidence 7899999999999999995 443
No 405
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.09 E-value=4.7e-11 Score=102.56 Aligned_cols=97 Identities=13% Similarity=0.136 Sum_probs=64.0
Q ss_pred cCCCEEEEEEeccCCccchhhHHHHHHHHH--HHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhh
Q 013684 69 LEGKVTALYFSANWYPPCGNFTGVLVDVYE--ELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 146 (438)
Q Consensus 69 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~--~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 146 (438)
..||+|+|+|||+||++|+.+.|.+.+..+ ++.+. .++.|++|.+. ..+..
T Consensus 42 ~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~----~fv~V~vD~e~-----------------------~~~~~ 94 (151)
T 3ph9_A 42 KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQN----KFIMLNLMHET-----------------------TDKNL 94 (151)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHH----TCEEEEESSCC-----------------------SCGGG
T ss_pred HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhc----CeEEEEecCCc-----------------------hhhHh
Confidence 368999999999999999999999886422 22221 24555665321 11245
Q ss_pred hcCcCccceEEEecCCCCCCCcccccchhHHhhhCCCCccCChhHHHHHHHHH
Q 013684 147 KFDIEGIPCLVVLQPYDDKDDATLHDGVELIYKYGIRAFPFTKEKLEELQKEE 199 (438)
Q Consensus 147 ~~~v~~~P~~~lvd~~~~~G~v~~~~~~~~i~~~~~~a~p~~~e~l~~L~~~~ 199 (438)
.|++.++||++++++ +|+++.+... .++...|++.......+.+..
T Consensus 95 ~~~v~~~PT~~f~~~---~G~~v~~~~G----~~~~~~~~~~~~~~~~ll~~~ 140 (151)
T 3ph9_A 95 SPDGQYVPRIMFVDP---SLTVRADIAG----RYSNRLYTYEPRDLPLLIENM 140 (151)
T ss_dssp CTTCCCSSEEEEECT---TSCBCTTCCC----SCTTSTTCCCGGGHHHHHHHH
T ss_pred hcCCCCCCEEEEECC---CCCEEEEEeC----CcCCcccccchhhHHHHHHHH
Confidence 689999999999999 9998876431 122333556555555544433
No 406
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.09 E-value=1.2e-10 Score=94.92 Aligned_cols=71 Identities=20% Similarity=0.425 Sum_probs=60.3
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+++++|+||++||++|+.+.|.|.+++++++ ++.++.|+.|.. ..+++.|+
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~~~~~~v~~~~~------------------------~~~~~~~~ 78 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP----GAIFLKVDVDEL------------------------KDVAEAYN 78 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT----TSEEEEEETTTS------------------------HHHHHHTT
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC----CcEEEEEEcccC------------------------HHHHHHcC
Confidence 47999999999999999999999999999874 378888877643 67889999
Q ss_pred cCccceEEEecCCCCCCCccccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
+.++|+++++ + +|+++.+.
T Consensus 79 v~~~Pt~~~~-~---~g~~~~~~ 97 (118)
T 2vm1_A 79 VEAMPTFLFI-K---DGEKVDSV 97 (118)
T ss_dssp CCSBSEEEEE-E---TTEEEEEE
T ss_pred CCcCcEEEEE-e---CCeEEEEe
Confidence 9999999888 5 88876543
No 407
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.09 E-value=3.4e-10 Score=99.40 Aligned_cols=71 Identities=21% Similarity=0.295 Sum_probs=58.4
Q ss_pred CCCEEEEEEec-------CCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCccccc
Q 013684 235 VGKTVGLYFSA-------RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPF 307 (438)
Q Consensus 235 ~gk~vll~F~a-------~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~ 307 (438)
++.+|+|+||| .||++|+.+.|.+++++++|.... ++.++.|+.|++|.+
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~-----~~~~v~f~kvD~d~~------------------ 92 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQA-----PQSLNLFFTVDVNEV------------------ 92 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHC-----TTCCEEEEEEETTTC------------------
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhcc-----CCCCEEEEEEECccC------------------
Confidence 35689999999 499999999999999999997320 013578888888765
Q ss_pred CCchhHHHHHhcCcCceeeEEEECCCC
Q 013684 308 GDPTIKELTKYFDVQGIPCLVIIGPEG 334 (438)
Q Consensus 308 ~~d~~~~l~~~~~v~~~P~~~lid~~G 334 (438)
++++++|||+++||++++ ++|
T Consensus 93 -----~~la~~~~I~siPtl~~F-~~g 113 (178)
T 3ga4_A 93 -----PQLVKDLKLQNVPHLVVY-PPA 113 (178)
T ss_dssp -----HHHHHHTTCCSSCEEEEE-CCC
T ss_pred -----HHHHHHcCCCCCCEEEEE-cCC
Confidence 789999999999999999 454
No 408
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.09 E-value=1.1e-10 Score=95.72 Aligned_cols=81 Identities=11% Similarity=0.178 Sum_probs=61.9
Q ss_pred CCCCCEEeccc-cCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCC--CCEEEEEEecCCCHHHHHHhHhcCCccccc
Q 013684 58 KEIGEEVKVSD-LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNG--SDFEVVFVSSDEDLNAFNNYRACMPWLAVP 134 (438)
Q Consensus 58 ~~~g~~v~l~~-~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~--~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~ 134 (438)
+++++.+.... .++++++|+||++||++|+.+.|.|.++++++++.+ .++.++.|+.+...
T Consensus 11 ~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~---------------- 74 (121)
T 2djj_A 11 VVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND---------------- 74 (121)
T ss_dssp ECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC----------------
T ss_pred EecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc----------------
Confidence 56666555442 468999999999999999999999999999997621 14777777766330
Q ss_pred CCChHHHHHHhhhcCcCccceEEEecCCCCCCCc
Q 013684 135 YSDLETKKALNRKFDIEGIPCLVVLQPYDDKDDA 168 (438)
Q Consensus 135 ~~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v 168 (438)
+++ +|.++|++++++. +|++
T Consensus 75 ---------~~~--~v~~~Pt~~~~~~---~~~~ 94 (121)
T 2djj_A 75 ---------VPD--EIQGFPTIKLYPA---GAKG 94 (121)
T ss_dssp ---------CSS--CCSSSSEEEEECS---SCTT
T ss_pred ---------ccc--ccCcCCeEEEEeC---cCCC
Confidence 222 8999999999997 7663
No 409
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.08 E-value=6.5e-11 Score=98.07 Aligned_cols=71 Identities=21% Similarity=0.466 Sum_probs=56.5
Q ss_pred CCCEEEEEEeccCCc--------------cchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccC
Q 013684 70 EGKVTALYFSANWYP--------------PCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPY 135 (438)
Q Consensus 70 ~gk~vll~F~a~wC~--------------~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~ 135 (438)
.||+++|+||++||+ +|+.+.|.+.++++++++ ++.++.|++|..
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~---~~~~~~vd~d~~------------------ 78 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG---KLTVAKLNIDQN------------------ 78 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC----------CEEEEEETTSC------------------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC---CeEEEEEECCCC------------------
Confidence 589999999999999 999999999999998864 388888887754
Q ss_pred CChHHHHHHhhhcCcCccceEEEecCCCCCCCcccc
Q 013684 136 SDLETKKALNRKFDIEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 136 ~d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
..+++.|+|.++|+++++ + +|+++.+
T Consensus 79 ------~~l~~~~~v~~~Pt~~~~-~---~G~~~~~ 104 (123)
T 1oaz_A 79 ------PGTAPKYGIRGIPTLLLF-K---NGEVAAT 104 (123)
T ss_dssp ------TTTGGGGTCCBSSEEEEE-E---SSSEEEE
T ss_pred ------HHHHHHcCCCccCEEEEE-E---CCEEEEE
Confidence 457789999999999999 7 9988754
No 410
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.08 E-value=8.5e-11 Score=107.77 Aligned_cols=72 Identities=21% Similarity=0.473 Sum_probs=61.5
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+|+++|+||++||++|+.+.|.|.+++++++++ +.++.|++|.. ..+++.|+
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~---v~~~~vd~d~~------------------------~~l~~~~~ 81 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK---LTVAKLNIDQN------------------------PGTAPKYG 81 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---CEEEEEETTTC------------------------TTTGGGGT
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC---cEEEEEECCCC------------------------HHHHHHcC
Confidence 5799999999999999999999999999998653 88888888754 45678899
Q ss_pred cCccceEEEecCCCCCCCccccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
|.++|++++++ +|+++.+.
T Consensus 82 v~~~Pt~~~~~----~G~~~~~~ 100 (222)
T 3dxb_A 82 IRGIPTLLLFK----NGEVAATK 100 (222)
T ss_dssp CCSBSEEEEEE----TTEEEEEE
T ss_pred CCcCCEEEEEE----CCeEEEEe
Confidence 99999999996 78776543
No 411
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.07 E-value=4.8e-11 Score=109.02 Aligned_cols=70 Identities=10% Similarity=0.152 Sum_probs=59.6
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
+|++|+|+||++||++|+.+.|.|.+++++|. ++.|+.|+++ + ..
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-----------~v~f~~vd~~-~-----------------------~~ 163 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-----------MVKFCKIRAS-N-----------------------TG 163 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-----------TSEEEEEEHH-H-----------------------HT
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-----------CeEEEEEECC-c-----------------------HH
Confidence 46899999999999999999999999988774 4788888876 2 44
Q ss_pred HHHhcCcCceeeEEEECCCCcEEEcc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~i~~~~ 340 (438)
+++.|+|.++||++++ ++|+++.+.
T Consensus 164 l~~~~~i~~~PTl~~~-~~G~~v~~~ 188 (217)
T 2trc_P 164 AGDRFSSDVLPTLLVY-KGGELISNF 188 (217)
T ss_dssp CSTTSCGGGCSEEEEE-ETTEEEEEE
T ss_pred HHHHCCCCCCCEEEEE-ECCEEEEEE
Confidence 6778999999999999 699988763
No 412
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.07 E-value=8.2e-12 Score=100.80 Aligned_cols=73 Identities=16% Similarity=0.325 Sum_probs=53.7
Q ss_pred eeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCccccc
Q 013684 228 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPF 307 (438)
Q Consensus 228 ~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~ 307 (438)
.+++++..||+++|+|||+|||+|+.+.|.|.++++++ ..|-+..|...
T Consensus 4 ~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~--------------~~v~~~~~~~~----------------- 52 (106)
T 3kp8_A 4 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQV--------------PYVECSPNGPG----------------- 52 (106)
T ss_dssp HHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGS--------------CEEESCTTCTT-----------------
T ss_pred hhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhC--------------CEEEEeccccc-----------------
Confidence 45667777888999999999999999999998886432 23333332110
Q ss_pred CCchhHHHHHhcCcCceeeEEEECCCCcE
Q 013684 308 GDPTIKELTKYFDVQGIPCLVIIGPEGKT 336 (438)
Q Consensus 308 ~~d~~~~l~~~~~v~~~P~~~lid~~G~i 336 (438)
+...++++.|+|.++||+++ +|+.
T Consensus 53 --~~~~~l~~~~~V~~~PT~~i---~G~~ 76 (106)
T 3kp8_A 53 --TPQAQECTEAGITSYPTWII---NGRT 76 (106)
T ss_dssp --SCCCHHHHHTTCCSSSEEEE---TTEE
T ss_pred --chhHHHHHHcCCeEeCEEEE---CCEE
Confidence 11367899999999999776 7764
No 413
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.07 E-value=4.6e-10 Score=84.28 Aligned_cols=62 Identities=11% Similarity=0.209 Sum_probs=51.9
Q ss_pred EEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHHHHh
Q 013684 239 VGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKY 318 (438)
Q Consensus 239 vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~ 318 (438)
..|.||++||++|+.+.|.+.++.++++. ++.++.|+ + .++++.
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~----------~~~~~~v~---~-----------------------~~~~~~ 45 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI----------DAEFEKIK---E-----------------------MDQILE 45 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC----------CEEEEEEC---S-----------------------HHHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC----------ceEEEEec---C-----------------------HHHHHH
Confidence 45899999999999999999999888753 36676665 2 567889
Q ss_pred cCcCceeeEEEECCCCcEEEc
Q 013684 319 FDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 319 ~~v~~~P~~~lid~~G~i~~~ 339 (438)
|+|.++||+++ +|+++.+
T Consensus 46 ~~v~~~Pt~~~---~G~~~~~ 63 (77)
T 1ilo_A 46 AGLTALPGLAV---DGELKIM 63 (77)
T ss_dssp HTCSSSSCEEE---TTEEEEC
T ss_pred CCCCcCCEEEE---CCEEEEc
Confidence 99999999988 8998876
No 414
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.04 E-value=2.5e-10 Score=96.15 Aligned_cols=69 Identities=9% Similarity=0.033 Sum_probs=56.3
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
+||+|+|+|||+||++|+.+.|.|.++++++. ++.++.|+++.. .+.|+
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~----~v~~~~vd~~~~---------------------------~~~~~ 77 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP----ETKFVKAIVNSC---------------------------IEHYH 77 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS----SEEEEEECCSSS---------------------------CSSCC
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC----CcEEEEEEhhcC---------------------------cccCC
Confidence 36899999999999999999999999998862 477777766532 14799
Q ss_pred cCccceEEEecCCCCCCCcccccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
|.++||+++++ +|+++.+..
T Consensus 78 i~~~Pt~~~~~----~G~~v~~~~ 97 (135)
T 2dbc_A 78 DNCLPTIFVYK----NGQIEGKFI 97 (135)
T ss_dssp SSCCSEEEEES----SSSCSEEEE
T ss_pred CCCCCEEEEEE----CCEEEEEEE
Confidence 99999999996 888776543
No 415
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.03 E-value=1.9e-10 Score=95.21 Aligned_cols=77 Identities=16% Similarity=0.416 Sum_probs=59.7
Q ss_pred CCCEEEEEEecc-------CCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHH
Q 013684 70 EGKVTALYFSAN-------WYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKK 142 (438)
Q Consensus 70 ~gk~vll~F~a~-------wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~ 142 (438)
.|++++|+|||+ ||++|+.+.|.|.++++++++ ++.++.|+++.... |. +. ..
T Consensus 23 ~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~---~~~~~~vd~~~~~~-~~--------------d~--~~ 82 (123)
T 1wou_A 23 NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE---GCVFIYCQVGEKPY-WK--------------DP--NN 82 (123)
T ss_dssp TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT---TEEEEEEECCCHHH-HH--------------CT--TC
T ss_pred CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC---CcEEEEEECCCchh-hh--------------ch--hH
Confidence 589999999999 999999999999999887753 48888888864211 00 11 15
Q ss_pred HHhhhcCcCccceEEEecCCCCCCCcc
Q 013684 143 ALNRKFDIEGIPCLVVLQPYDDKDDAT 169 (438)
Q Consensus 143 ~l~~~~~v~~~P~~~lvd~~~~~G~v~ 169 (438)
.+++.|+|.++|++++++. .+++.
T Consensus 83 ~~~~~~~i~~~Pt~~~~~~---~~~~~ 106 (123)
T 1wou_A 83 DFRKNLKVTAVPTLLKYGT---PQKLV 106 (123)
T ss_dssp HHHHHHCCCSSSEEEETTS---SCEEE
T ss_pred HHHHHCCCCeeCEEEEEcC---CceEe
Confidence 6788899999999999985 44444
No 416
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.03 E-value=5.8e-11 Score=99.98 Aligned_cols=76 Identities=17% Similarity=0.184 Sum_probs=59.5
Q ss_pred EEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCc
Q 013684 73 VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEG 152 (438)
Q Consensus 73 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~ 152 (438)
+++|+|||+||++|+.+.|.|.+++++++ +.++.|+++.+... ...+....+++.|+|.+
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-----v~~~~vd~~~~~~~---------------~~~d~~~~l~~~~~v~~ 92 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD-----VPIVMFIWGSLIGE---------------RELSAARLEMNKAGVEG 92 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC-----SCEEEEEECTTCCH---------------HHHHHHHHHHHHHTCCS
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC-----CEEEEEECCCchhh---------------hhhhhhHHHHHHcCCce
Confidence 89999999999999999999999888762 67888887543221 01233478899999999
Q ss_pred cceEEEecCCCCCCCccccc
Q 013684 153 IPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 153 ~P~~~lvd~~~~~G~v~~~~ 172 (438)
+|++++++ +|+++.+.
T Consensus 93 ~Pt~~~~~----~G~~v~~~ 108 (135)
T 3emx_A 93 TPTLVFYK----EGRIVDKL 108 (135)
T ss_dssp SSEEEEEE----TTEEEEEE
T ss_pred eCeEEEEc----CCEEEEEE
Confidence 99888877 88877654
No 417
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.01 E-value=5.2e-10 Score=89.96 Aligned_cols=74 Identities=9% Similarity=0.134 Sum_probs=61.8
Q ss_pred CCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCc
Q 013684 71 GKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDI 150 (438)
Q Consensus 71 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v 150 (438)
+++++|+|+|+|||+|+...|.+.++.++ + ++.++.|.+|..++ .+..+++.|+|
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~--~---~v~~~~vdVde~r~--------------------~Sn~IA~~~~V 78 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE--R---DMDGYYLIVQQERD--------------------LSDYIAKKTNV 78 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH--H---TCCEEEEEGGGGHH--------------------HHHHHHHHHTC
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc--C---CceEEEEEeecCch--------------------hhHHHHHHhCC
Confidence 78999999999999999999999998874 2 37788888875533 23679999999
Q ss_pred Cc-cceEEEecCCCCCCCcccccc
Q 013684 151 EG-IPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 151 ~~-~P~~~lvd~~~~~G~v~~~~~ 173 (438)
.+ .|+++++. +|+++.+..
T Consensus 79 ~h~sPq~il~k----~G~~v~~~S 98 (112)
T 3iv4_A 79 KHESPQAFYFV----NGEMVWNRD 98 (112)
T ss_dssp CCCSSEEEEEE----TTEEEEEEE
T ss_pred ccCCCeEEEEE----CCEEEEEee
Confidence 95 99999997 898887643
No 418
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.01 E-value=2.5e-10 Score=93.87 Aligned_cols=68 Identities=9% Similarity=0.039 Sum_probs=56.3
Q ss_pred CCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCc
Q 013684 71 GKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDI 150 (438)
Q Consensus 71 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v 150 (438)
+++|+|+|||+||++|+.+.|.|.++++++. ++.++.|++|.. .+.|+|
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~----~v~f~kvd~d~~---------------------------~~~~~v 71 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFP----ETKFVKAIVNSC---------------------------IQHYHD 71 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCT----TSEEEEEEGGGT---------------------------STTCCG
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCC----CCEEEEEEhHHh---------------------------HHHCCC
Confidence 4599999999999999999999999999873 377887766621 367999
Q ss_pred CccceEEEecCCCCCCCcccccc
Q 013684 151 EGIPCLVVLQPYDDKDDATLHDG 173 (438)
Q Consensus 151 ~~~P~~~lvd~~~~~G~v~~~~~ 173 (438)
.++||++++. +|+.+.+..
T Consensus 72 ~~~PT~~~fk----~G~~v~~~~ 90 (118)
T 3evi_A 72 NCLPTIFVYK----NGQIEAKFI 90 (118)
T ss_dssp GGCSEEEEEE----TTEEEEEEE
T ss_pred CCCCEEEEEE----CCEEEEEEe
Confidence 9999999997 888776643
No 419
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.01 E-value=2.1e-10 Score=115.46 Aligned_cols=76 Identities=17% Similarity=0.238 Sum_probs=60.2
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+|+++|+|||+||++|+.+.|.+.++++++++.. +++..+.+.++.|++|.. .+
T Consensus 41 ~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~--g~~~~~~v~f~~VD~d~~-----------------------~~ 95 (470)
T 3qcp_A 41 PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEH--GKDALQIATAAAVNCASE-----------------------VD 95 (470)
T ss_dssp GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSS--CSSGGGGCEEEEEETTTC-----------------------HH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhc--ccccCceEEEEEEECCCC-----------------------HH
Confidence 34899999999999999999999999999886320 000001488999988865 67
Q ss_pred HHHhcCcCceeeEEEECCCCc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGK 335 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~ 335 (438)
+++.|+|.++||+++++++|.
T Consensus 96 la~~y~V~~~PTlilf~~gg~ 116 (470)
T 3qcp_A 96 LCRKYDINFVPRLFFFYPRDS 116 (470)
T ss_dssp HHHHTTCCSSCEEEEEEESSC
T ss_pred HHHHcCCCccCeEEEEECCCc
Confidence 899999999999999976553
No 420
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.00 E-value=8.4e-10 Score=113.61 Aligned_cols=68 Identities=18% Similarity=0.421 Sum_probs=60.3
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKE 314 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~ 314 (438)
.+++++|.|||+||++|+.+.|.+.++++.+++. ++.++.|+++.+ ..
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~---------~v~~~~vd~~~~-----------------------~~ 77 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK---------NITLAQIDCTEN-----------------------QD 77 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---------TCEEEEEETTTC-----------------------HH
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccC---------CeEEEEEECCCC-----------------------HH
Confidence 4789999999999999999999999999998753 588999988765 67
Q ss_pred HHHhcCcCceeeEEEECCCCc
Q 013684 315 LTKYFDVQGIPCLVIIGPEGK 335 (438)
Q Consensus 315 l~~~~~v~~~P~~~lid~~G~ 335 (438)
+++.|+|.++||++++ ++|+
T Consensus 78 l~~~~~v~~~Pt~~~~-~~g~ 97 (504)
T 2b5e_A 78 LCMEHNIPGFPSLKIF-KNSD 97 (504)
T ss_dssp HHHHTTCCSSSEEEEE-ETTC
T ss_pred HHHhcCCCcCCEEEEE-eCCc
Confidence 9999999999999999 5566
No 421
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.98 E-value=1.1e-09 Score=107.40 Aligned_cols=70 Identities=16% Similarity=0.232 Sum_probs=59.7
Q ss_pred CCCEEEEEEecCCChhhhhhhHH-------HHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCccccc
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPK-------LLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPF 307 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~-------l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~ 307 (438)
.+++++|+|||+||+ |+.++|. +.++++.+++. ++.++.|+++.+
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~---------~v~~~~Vd~~~~------------------ 78 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK---------DIGFVMVDAKKE------------------ 78 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS---------SEEEEEEETTTT------------------
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc---------CcEEEEEeCCCC------------------
Confidence 468999999999999 9999999 78888777643 688999988765
Q ss_pred CCchhHHHHHhcCcCceeeEEEECCCCcEEE
Q 013684 308 GDPTIKELTKYFDVQGIPCLVIIGPEGKTVT 338 (438)
Q Consensus 308 ~~d~~~~l~~~~~v~~~P~~~lid~~G~i~~ 338 (438)
..+++.|+|.++||++++ ++|++..
T Consensus 79 -----~~l~~~~~v~~~Pt~~~~-~~g~~~~ 103 (350)
T 1sji_A 79 -----AKLAKKLGFDEEGSLYVL-KGDRTIE 103 (350)
T ss_dssp -----HHHHHHHTCCSTTEEEEE-ETTEEEE
T ss_pred -----HHHHHhcCCCccceEEEE-ECCcEEE
Confidence 678999999999999999 7888553
No 422
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.52 E-value=5.9e-11 Score=94.51 Aligned_cols=71 Identities=23% Similarity=0.427 Sum_probs=58.7
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+|+++|+||++||++|+.+.|.+.++++++++ ++.++.|+.|.+ ..+++.|+
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~~v~~~~~------------------------~~~~~~~~ 70 (106)
T 2yj7_A 18 SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG---KVKVVKVNVDEN------------------------PNTAAQYG 70 (106)
Confidence 578999999999999999999999999998864 266776665532 56788899
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
+.++|+++++ + +|+++.+
T Consensus 71 v~~~Pt~~~~-~---~g~~~~~ 88 (106)
T 2yj7_A 71 IRSIPTLLLF-K---NGQVVDR 88 (106)
Confidence 9999999999 6 8877654
No 423
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.96 E-value=5.6e-10 Score=85.29 Aligned_cols=60 Identities=23% Similarity=0.436 Sum_probs=51.8
Q ss_pred CEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcC
Q 013684 72 KVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIE 151 (438)
Q Consensus 72 k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~ 151 (438)
.++++.||++||++|+.+.|.|.++++++++ ++.++.|++|.+ .++++.|++.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~------------------------~~~~~~~~v~ 55 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD---AVEVEYINVMEN------------------------PQKAMEYGIM 55 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS---SEEEEEEESSSS------------------------CCTTTSTTTC
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC---ceEEEEEECCCC------------------------HHHHHHCCCc
Confidence 5789999999999999999999999988753 488998888754 3456789999
Q ss_pred ccceEEE
Q 013684 152 GIPCLVV 158 (438)
Q Consensus 152 ~~P~~~l 158 (438)
++|++++
T Consensus 56 ~~Pt~~~ 62 (85)
T 1fo5_A 56 AVPTIVI 62 (85)
T ss_dssp CSSEEEE
T ss_pred ccCEEEE
Confidence 9999998
No 424
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.96 E-value=1.9e-09 Score=94.70 Aligned_cols=68 Identities=24% Similarity=0.352 Sum_probs=56.8
Q ss_pred CCCEEEEEEec-------cCCccchhhHHHHHHHHHHHhcCC--CCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHH
Q 013684 70 EGKVTALYFSA-------NWYPPCGNFTGVLVDVYEELRNNG--SDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLET 140 (438)
Q Consensus 70 ~gk~vll~F~a-------~wC~~C~~~~p~l~~l~~~~~~~~--~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~ 140 (438)
++.+|+|+||| .||++|+.+.|.|.++++++.... .++.+..|++|..
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~----------------------- 92 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEV----------------------- 92 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTC-----------------------
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccC-----------------------
Confidence 35689999999 499999999999999999997220 1377777776654
Q ss_pred HHHHhhhcCcCccceEEEecC
Q 013684 141 KKALNRKFDIEGIPCLVVLQP 161 (438)
Q Consensus 141 ~~~l~~~~~v~~~P~~~lvd~ 161 (438)
.+++.+|+|+++||++++.+
T Consensus 93 -~~la~~~~I~siPtl~~F~~ 112 (178)
T 3ga4_A 93 -PQLVKDLKLQNVPHLVVYPP 112 (178)
T ss_dssp -HHHHHHTTCCSSCEEEEECC
T ss_pred -HHHHHHcCCCCCCEEEEEcC
Confidence 78999999999999999995
No 425
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.94 E-value=5.8e-10 Score=85.19 Aligned_cols=59 Identities=15% Similarity=0.285 Sum_probs=50.7
Q ss_pred EEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCc
Q 013684 73 VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEG 152 (438)
Q Consensus 73 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~ 152 (438)
++++.||++||++|+.+.|.|.++++++++ ++.++.|++|.+ .++++.|++.+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~~vd~~~~------------------------~~~~~~~~v~~ 55 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD---KIDVEKIDIMVD------------------------REKAIEYGLMA 55 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS---SCCEEEECTTTC------------------------GGGGGGTCSSC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC---CeEEEEEECCCC------------------------HHHHHhCCcee
Confidence 468999999999999999999999999864 378888877754 35678899999
Q ss_pred cceEEE
Q 013684 153 IPCLVV 158 (438)
Q Consensus 153 ~P~~~l 158 (438)
+|++++
T Consensus 56 ~Pt~~~ 61 (85)
T 1nho_A 56 VPAIAI 61 (85)
T ss_dssp SSEEEE
T ss_pred eCEEEE
Confidence 999998
No 426
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.94 E-value=1.3e-10 Score=96.51 Aligned_cols=71 Identities=23% Similarity=0.445 Sum_probs=58.8
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+|+++|+||++||++|+.+.|.|.+++++++ ++.++.|++|.. ..+++.|+
T Consensus 35 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~----~v~~~~v~~~~~------------------------~~~~~~~~ 86 (130)
T 1wmj_A 35 AGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP----GAVFLKVDVDEL------------------------KEVAEKYN 86 (130)
T ss_dssp TTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT----TBCCEECCTTTS------------------------GGGHHHHT
T ss_pred cCCEEEEEEECCCChhHHHHHHHHHHHHHHCC----CCEEEEEeccch------------------------HHHHHHcC
Confidence 58999999999999999999999999999874 377777766543 45778899
Q ss_pred cCccceEEEecCCCCCCCccccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
+.++|+++++ + +|+++.+.
T Consensus 87 v~~~Pt~~~~-~---~g~~~~~~ 105 (130)
T 1wmj_A 87 VEAMPTFLFI-K---DGAEADKV 105 (130)
T ss_dssp CCSSCCCCBC-T---TTTCCBCC
T ss_pred CCccceEEEE-e---CCeEEEEE
Confidence 9999998887 5 88876553
No 427
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.94 E-value=1.2e-11 Score=99.79 Aligned_cols=69 Identities=12% Similarity=0.297 Sum_probs=50.6
Q ss_pred EEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHH
Q 013684 63 EVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKK 142 (438)
Q Consensus 63 ~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~ 142 (438)
.+++++..+|+++|+|||+|||+|+.+.|.|.+++++++ .|+++.+.. .+...
T Consensus 4 ~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~---------~v~~~~~~~------------------~~~~~ 56 (106)
T 3kp8_A 4 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP---------YVECSPNGP------------------GTPQA 56 (106)
T ss_dssp HHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC---------EEESCTTCT------------------TSCCC
T ss_pred hhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC---------EEEEecccc------------------cchhH
Confidence 456677778899999999999999999999998876542 333331100 00016
Q ss_pred HHhhhcCcCccceEEE
Q 013684 143 ALNRKFDIEGIPCLVV 158 (438)
Q Consensus 143 ~l~~~~~v~~~P~~~l 158 (438)
++++.|+|.++||+++
T Consensus 57 ~l~~~~~V~~~PT~~i 72 (106)
T 3kp8_A 57 QECTEAGITSYPTWII 72 (106)
T ss_dssp HHHHHTTCCSSSEEEE
T ss_pred HHHHHcCCeEeCEEEE
Confidence 7889999999999776
No 428
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.93 E-value=3.8e-09 Score=90.71 Aligned_cols=75 Identities=13% Similarity=0.303 Sum_probs=56.6
Q ss_pred cCCCEEEEEEecCCChhhhhhhHHH---HHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCc
Q 013684 234 LVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDP 310 (438)
Q Consensus 234 ~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d 310 (438)
-.||+++|+|+++||++|+.+.... .++.+.+.+ ++.++.++.+...
T Consensus 40 ~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~----------~fv~v~~d~~~~~-------------------- 89 (153)
T 2dlx_A 40 MQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE----------HFIFWQVYHDSEE-------------------- 89 (153)
T ss_dssp HHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH----------TEEEEEEESSSHH--------------------
T ss_pred HcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc----------CeEEEEEecCCHh--------------------
Confidence 3589999999999999999986554 345555544 3666666664321
Q ss_pred hhHHHHHhcCcCceeeEEEECCC-CcEEEc
Q 013684 311 TIKELTKYFDVQGIPCLVIIGPE-GKTVTK 339 (438)
Q Consensus 311 ~~~~l~~~~~v~~~P~~~lid~~-G~i~~~ 339 (438)
...+.+.|++.++|+++++|++ |+.+..
T Consensus 90 -~~~l~~~y~v~~~P~~~fld~~~G~~l~~ 118 (153)
T 2dlx_A 90 -GQRYIQFYKLGDFPYVSILDPRTGQKLVE 118 (153)
T ss_dssp -HHHHHHHHTCCSSSEEEEECTTTCCCCEE
T ss_pred -HHHHHHHcCCCCCCEEEEEeCCCCcEeee
Confidence 3678899999999999999998 866554
No 429
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.90 E-value=5.8e-09 Score=102.94 Aligned_cols=72 Identities=10% Similarity=0.059 Sum_probs=58.4
Q ss_pred CCCEEEEEEecCCChhhhhhh------HHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccC
Q 013684 235 VGKTVGLYFSARWCIPCEKFM------PKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFG 308 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~------p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~ 308 (438)
.+++++|.|||+||++|.... |.+.++++.+++. ++.++.|+++..
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~---------~v~~~~Vd~~~~------------------- 80 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDK---------GVGFGLVDSEKD------------------- 80 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTT---------TEEEEEEETTTT-------------------
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcC---------CceEEEEeCccc-------------------
Confidence 468999999999999973322 6788888888643 688888888765
Q ss_pred CchhHHHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 309 DPTIKELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 309 ~d~~~~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
..++++|+|+++||++++ ++|+.+..
T Consensus 81 ----~~l~~~~~V~~~PTl~~f-~~G~~~~y 106 (367)
T 3us3_A 81 ----AAVAKKLGLTEEDSIYVF-KEDEVIEY 106 (367)
T ss_dssp ----HHHHHHHTCCSTTEEEEE-ETTEEEEC
T ss_pred ----HHHHHHcCCCcCceEEEE-ECCcEEEe
Confidence 679999999999999999 57887643
No 430
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.89 E-value=7.5e-10 Score=94.10 Aligned_cols=70 Identities=13% Similarity=0.270 Sum_probs=50.3
Q ss_pred CCEEEEEEeccC--CccchhhHHHHHHHHHHHhcCCCCEE--EEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhh
Q 013684 71 GKVTALYFSANW--YPPCGNFTGVLVDVYEELRNNGSDFE--VVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 146 (438)
Q Consensus 71 gk~vll~F~a~w--C~~C~~~~p~l~~l~~~~~~~~~~~~--iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 146 (438)
++.++|+|+++| |++|+.+.|.|.++++++ + ++. ++.|++|. ..++++
T Consensus 34 ~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~---~v~~~~~~Vd~d~------------------------~~~la~ 85 (142)
T 2es7_A 34 VGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P---QFDWQVAVADLEQ------------------------SEAIGD 85 (142)
T ss_dssp CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T---TSCCEEEEECHHH------------------------HHHHHH
T ss_pred CCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c---ccceeEEEEECCC------------------------CHHHHH
Confidence 456788999888 999999999999999987 3 266 77775552 268899
Q ss_pred hcCcCccceEEEecCCCCCCCccccc
Q 013684 147 KFDIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 147 ~~~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
.|+|.++||++++ + +|+++.+.
T Consensus 86 ~~~V~~iPT~~~f-k---~G~~v~~~ 107 (142)
T 2es7_A 86 RFNVRRFPATLVF-T---DGKLRGAL 107 (142)
T ss_dssp TTTCCSSSEEEEE-S---CC----CE
T ss_pred hcCCCcCCeEEEE-e---CCEEEEEE
Confidence 9999999999999 6 89877654
No 431
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.89 E-value=1.3e-09 Score=109.72 Aligned_cols=68 Identities=18% Similarity=0.223 Sum_probs=58.1
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCC-----CEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHH
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGS-----DFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKAL 144 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~-----~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l 144 (438)
.+|+|+|+|||+||++|+.+.|.|.++++++++... ++.++.|++|.. .++
T Consensus 41 ~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~------------------------~~l 96 (470)
T 3qcp_A 41 PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASE------------------------VDL 96 (470)
T ss_dssp GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTC------------------------HHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCC------------------------HHH
Confidence 348999999999999999999999999999875421 378888877644 678
Q ss_pred hhhcCcCccceEEEecC
Q 013684 145 NRKFDIEGIPCLVVLQP 161 (438)
Q Consensus 145 ~~~~~v~~~P~~~lvd~ 161 (438)
++.|+|.++||++++++
T Consensus 97 a~~y~V~~~PTlilf~~ 113 (470)
T 3qcp_A 97 CRKYDINFVPRLFFFYP 113 (470)
T ss_dssp HHHTTCCSSCEEEEEEE
T ss_pred HHHcCCCccCeEEEEEC
Confidence 99999999999999986
No 432
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.89 E-value=1.9e-10 Score=93.65 Aligned_cols=77 Identities=13% Similarity=0.116 Sum_probs=54.7
Q ss_pred cCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhc
Q 013684 69 LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKF 148 (438)
Q Consensus 69 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 148 (438)
-+...+||+|||+||++|+.+.+.+...++..... ..+.++.|+++.+.. ..++..|
T Consensus 16 ~~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~-~~~~l~~vdv~~~~~----------------------~~la~~~ 72 (116)
T 3dml_A 16 DKAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEG-RAAPVQRLQMRDPLP----------------------PGLELAR 72 (116)
T ss_dssp ---CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHH-HHSCEEEEETTSCCC----------------------TTCBCSS
T ss_pred ccCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhc-ccceEEEEECCCCCc----------------------hhHHHHC
Confidence 34578999999999999999988766544331110 126688888876522 3566789
Q ss_pred CcCccceEEEecCCCCCCCccccc
Q 013684 149 DIEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 149 ~v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
+|.++||+++++ +|+.+.+-
T Consensus 73 ~V~g~PT~i~f~----~G~ev~Ri 92 (116)
T 3dml_A 73 PVTFTPTFVLMA----GDVESGRL 92 (116)
T ss_dssp CCCSSSEEEEEE----TTEEEEEE
T ss_pred CCCCCCEEEEEE----CCEEEeee
Confidence 999999999998 88777653
No 433
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.85 E-value=1.8e-09 Score=100.17 Aligned_cols=70 Identities=10% Similarity=0.155 Sum_probs=57.3
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
++++|||+|||+||++|+.+.|.|.++++++. ++.++.|+++. ..++..|+
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~----~v~f~kVd~d~-------------------------~~l~~~~~ 182 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYP----MVKFCKIKASN-------------------------TGAGDRFS 182 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT----TSEEEEEEHHH-------------------------HCCTTSSC
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC----CCEEEEEeCCc-------------------------HHHHHHCC
Confidence 47999999999999999999999999999874 37777776542 23567899
Q ss_pred cCccceEEEecCCCCCCCccccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLHD 172 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~~ 172 (438)
|.++||++++. +|.++.+.
T Consensus 183 I~~~PTll~~~----~G~~v~~~ 201 (245)
T 1a0r_P 183 SDVLPTLLVYK----GGELLSNF 201 (245)
T ss_dssp TTTCSEEEEEE----TTEEEEEE
T ss_pred CCCCCEEEEEE----CCEEEEEE
Confidence 99999998886 88877543
No 434
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.83 E-value=1.5e-09 Score=99.12 Aligned_cols=69 Identities=12% Similarity=0.177 Sum_probs=57.6
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
+|++|+|+||++||++|+.+.|.|.++++++. ++.++.|+++ . ..++..|+
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~----~v~f~~vd~~---~----------------------~~l~~~~~ 169 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP----MVKFCKIRAS---N----------------------TGAGDRFS 169 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT----TSEEEEEEHH---H----------------------HTCSTTSC
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC----CeEEEEEECC---c----------------------HHHHHHCC
Confidence 45899999999999999999999999998873 3778877655 1 45677899
Q ss_pred cCccceEEEecCCCCCCCcccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATLH 171 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~~ 171 (438)
|.++||++++. +|.++.+
T Consensus 170 i~~~PTl~~~~----~G~~v~~ 187 (217)
T 2trc_P 170 SDVLPTLLVYK----GGELISN 187 (217)
T ss_dssp GGGCSEEEEEE----TTEEEEE
T ss_pred CCCCCEEEEEE----CCEEEEE
Confidence 99999999996 8887654
No 435
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.83 E-value=7.8e-09 Score=96.02 Aligned_cols=67 Identities=16% Similarity=0.200 Sum_probs=55.4
Q ss_pred ccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCC-CCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhh
Q 013684 68 DLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNG-SDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 146 (438)
Q Consensus 68 ~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~-~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 146 (438)
++.|+++++.|||+|||+|+.+.|.|.+++.+++..+ .++.+..|+.+.. .++++
T Consensus 135 ~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~------------------------~~~~~ 190 (243)
T 2hls_A 135 SLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYEN------------------------PDIAD 190 (243)
T ss_dssp HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTC------------------------HHHHH
T ss_pred HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccC------------------------HHHHH
Confidence 4678899999999999999999999999999985311 2488877766543 56788
Q ss_pred hcCcCccceEEE
Q 013684 147 KFDIEGIPCLVV 158 (438)
Q Consensus 147 ~~~v~~~P~~~l 158 (438)
.|+|.++|++++
T Consensus 191 ~~~V~~vPt~~i 202 (243)
T 2hls_A 191 KYGVMSVPSIAI 202 (243)
T ss_dssp HTTCCSSSEEEE
T ss_pred HcCCeeeCeEEE
Confidence 999999999988
No 436
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.79 E-value=1.1e-08 Score=76.51 Aligned_cols=55 Identities=15% Similarity=0.136 Sum_probs=46.3
Q ss_pred EEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCcc
Q 013684 74 TALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGI 153 (438)
Q Consensus 74 vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~ 153 (438)
+.|+||++||++|+.+.|.+.+++++++. ++.++.|+ + .++++.|+|.++
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~---~~~~~~v~---~------------------------~~~~~~~~v~~~ 51 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI---DAEFEKIK---E------------------------MDQILEAGLTAL 51 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC---CEEEEEEC---S------------------------HHHHHHHTCSSS
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC---ceEEEEec---C------------------------HHHHHHCCCCcC
Confidence 46899999999999999999999988753 37777664 1 577889999999
Q ss_pred ceEEE
Q 013684 154 PCLVV 158 (438)
Q Consensus 154 P~~~l 158 (438)
|++++
T Consensus 52 Pt~~~ 56 (77)
T 1ilo_A 52 PGLAV 56 (77)
T ss_dssp SCEEE
T ss_pred CEEEE
Confidence 99998
No 437
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.74 E-value=7.9e-08 Score=84.15 Aligned_cols=39 Identities=13% Similarity=0.161 Sum_probs=33.4
Q ss_pred eeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHH
Q 013684 228 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIK 266 (438)
Q Consensus 228 ~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~ 266 (438)
...+.+..++++++.||.+|||+|..+.|.+.++.++++
T Consensus 14 ~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~ 52 (175)
T 3gyk_A 14 APVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP 52 (175)
T ss_dssp SCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred CCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCC
Confidence 345666778999999999999999999999999887754
No 438
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.74 E-value=1.7e-08 Score=80.88 Aligned_cols=65 Identities=22% Similarity=0.435 Sum_probs=53.8
Q ss_pred EEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHHHH
Q 013684 238 TVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTK 317 (438)
Q Consensus 238 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~ 317 (438)
.+++.||++||++|+...+.|.++.+++ ++.+..|++|.+ .++.+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~------------~i~~~~vDId~d-----------------------~~l~~ 74 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKS------------WFELEVINIDGN-----------------------EHLTR 74 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHS------------CCCCEEEETTTC-----------------------HHHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhc------------CCeEEEEECCCC-----------------------HHHHH
Confidence 5688999999999999999999987764 367888888866 45778
Q ss_pred hcCcCceeeEEEECCCCcEEEc
Q 013684 318 YFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 318 ~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.||+. +|+++++ .+|+.+..
T Consensus 75 ~ygv~-VP~l~~~-~dG~~v~~ 94 (107)
T 2fgx_A 75 LYNDR-VPVLFAV-NEDKELCH 94 (107)
T ss_dssp HSTTS-CSEEEET-TTTEEEEC
T ss_pred HhCCC-CceEEEE-ECCEEEEe
Confidence 89997 9999888 68988743
No 439
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.72 E-value=1.1e-07 Score=86.53 Aligned_cols=93 Identities=19% Similarity=0.266 Sum_probs=61.1
Q ss_pred eeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCC---CH---------------
Q 013684 229 VPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR---DQ--------------- 290 (438)
Q Consensus 229 ~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~---~~--------------- 290 (438)
+.+....||++++.||++|||+|+++.|.+.++.+. ++.|+.+.... ..
T Consensus 79 ~~~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~-------------~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~ 145 (216)
T 1eej_A 79 IVYKAPQEKHVITVFTDITCGYCHKLHEQMADYNAL-------------GITVRYLAFPRQGLDSDAEKEMKAIWCAKDK 145 (216)
T ss_dssp EEECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT-------------TEEEEEEECCTTCSSSHHHHHHHHHHTSSSH
T ss_pred eeecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC-------------CcEEEEEECCccCCCchHHHHHHHHHhccCH
Confidence 444555688999999999999999999998887542 36777765431 11
Q ss_pred -HHHHHHHhcCCCcc---cccCCchhHHHHHhcCcCceeeEEEECCCCcEE
Q 013684 291 -TSFESYFGTMPWLA---LPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTV 337 (438)
Q Consensus 291 -~~~~~~~~~~~~~~---~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~ 337 (438)
..|..++...+ +. .....+....+.+.|||.++||+++. +|+.+
T Consensus 146 ~~~~~~~~~~~~-~~~~~~~~~v~~~~~l~~~~gV~gtPt~v~~--dG~~~ 193 (216)
T 1eej_A 146 NKAFDDVMAGKS-VAPASCDVDIADHYALGVQLGVSGTPAVVLS--NGTLV 193 (216)
T ss_dssp HHHHHHHHTTCC-CCCCCCSCCHHHHHHHHHHHTCCSSSEEECT--TSCEE
T ss_pred HHHHHHHHhCCC-CChhHHHHHHHHHHHHHHHcCCCccCEEEEc--CCeEe
Confidence 12333333322 11 22334566789999999999998543 56543
No 440
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.72 E-value=3.4e-08 Score=84.76 Aligned_cols=74 Identities=14% Similarity=0.200 Sum_probs=56.0
Q ss_pred CCCEEEEEEeccCCccchhhHHHH---HHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhh
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVL---VDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNR 146 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~ 146 (438)
+||+|+|+|+++||..|+.+.... .++.+.+++ ++.++.++++... ...+.+
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~---~fv~v~~d~~~~~----------------------~~~l~~ 95 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE---HFIFWQVYHDSEE----------------------GQRYIQ 95 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH---TEEEEEEESSSHH----------------------HHHHHH
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc---CeEEEEEecCCHh----------------------HHHHHH
Confidence 589999999999999999986544 344455543 3777777665321 167889
Q ss_pred hcCcCccceEEEecCCCCC-CCcccc
Q 013684 147 KFDIEGIPCLVVLQPYDDK-DDATLH 171 (438)
Q Consensus 147 ~~~v~~~P~~~lvd~~~~~-G~v~~~ 171 (438)
.|++.++|+++++|+ + |+.+..
T Consensus 96 ~y~v~~~P~~~fld~---~~G~~l~~ 118 (153)
T 2dlx_A 96 FYKLGDFPYVSILDP---RTGQKLVE 118 (153)
T ss_dssp HHTCCSSSEEEEECT---TTCCCCEE
T ss_pred HcCCCCCCEEEEEeC---CCCcEeee
Confidence 999999999999999 7 766543
No 441
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.71 E-value=2.1e-08 Score=83.93 Aligned_cols=67 Identities=10% Similarity=0.147 Sum_probs=56.9
Q ss_pred CCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHH
Q 013684 236 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 315 (438)
Q Consensus 236 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 315 (438)
+++++++||++ |++|+.+.|.+.+++++|+++ +.++.|++|.. ..+
T Consensus 23 ~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk----------~~f~~vd~d~~-----------------------~~~ 68 (133)
T 2djk_A 23 GIPLAYIFAET-AEERKELSDKLKPIAEAQRGV----------INFGTIDAKAF-----------------------GAH 68 (133)
T ss_dssp TSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT----------SEEEEECTTTT-----------------------GGG
T ss_pred CCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe----------EEEEEEchHHh-----------------------HHH
Confidence 56899999999 899999999999999998764 77888887754 567
Q ss_pred HHhcCcCc--eeeEEEECC-CCcE
Q 013684 316 TKYFDVQG--IPCLVIIGP-EGKT 336 (438)
Q Consensus 316 ~~~~~v~~--~P~~~lid~-~G~i 336 (438)
++.|||++ +||+++++. +|+.
T Consensus 69 a~~~gi~~~~iPtl~i~~~~~g~~ 92 (133)
T 2djk_A 69 AGNLNLKTDKFPAFAIQEVAKNQK 92 (133)
T ss_dssp TTTTTCCSSSSSEEEEECTTTCCB
T ss_pred HHHcCCCcccCCEEEEEecCcCcc
Confidence 89999999 999999964 4666
No 442
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.66 E-value=1.2e-07 Score=87.84 Aligned_cols=70 Identities=11% Similarity=0.148 Sum_probs=56.1
Q ss_pred CCCEEEEEEe--cCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchh
Q 013684 235 VGKTVGLYFS--ARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 312 (438)
Q Consensus 235 ~gk~vll~F~--a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~ 312 (438)
.+++|+|.|| |+||+ +.|.|.++++.+.+. .+++.|+.|++|... ...+
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~-------~~~v~~akVD~d~~g------------------~~~n 82 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKA-------TKDLLIATVGVKDYG------------------ELEN 82 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHH-------CSSEEEEEEEECSST------------------TCTT
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhcc-------CCCeEEEEEECCccc------------------cccc
Confidence 4689999999 99998 999999999999752 136889999887510 0002
Q ss_pred HHHHHhcCcC--ceeeEEEECCCCc
Q 013684 313 KELTKYFDVQ--GIPCLVIIGPEGK 335 (438)
Q Consensus 313 ~~l~~~~~v~--~~P~~~lid~~G~ 335 (438)
.++++.|+|. ++||++++ + |+
T Consensus 83 ~~la~~~~V~~~~~PTl~~F-~-G~ 105 (248)
T 2c0g_A 83 KALGDRYKVDDKNFPSIFLF-K-GN 105 (248)
T ss_dssp HHHHHHTTCCTTSCCEEEEE-S-SS
T ss_pred HHHHHHhCCCcCCCCeEEEE-e-CC
Confidence 6799999999 99999999 5 76
No 443
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.65 E-value=1.7e-08 Score=76.54 Aligned_cols=65 Identities=18% Similarity=0.253 Sum_probs=48.1
Q ss_pred EEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHHHHhc
Q 013684 240 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 319 (438)
Q Consensus 240 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~ 319 (438)
++.||++|||+|+...+.+.++.+++ ++.+..+.+|.+. ...++.+.|
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~------------~~~~~~~~v~~~~--------------------~~~~~~~~~ 51 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPS------------KYTVEIVHLGTDK--------------------ARIAEAEKA 51 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTT------------TEEEEEEETTTCS--------------------STHHHHHHH
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhc------------CCeEEEEEecCCh--------------------hhHHHHHHc
Confidence 67799999999999999998876543 3455566665321 025677889
Q ss_pred CcCceeeEEEECCCCcEEEc
Q 013684 320 DVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 320 ~v~~~P~~~lid~~G~i~~~ 339 (438)
|+.++|++++ +|+++..
T Consensus 52 gv~~vPt~~i---~g~~~~~ 68 (80)
T 2k8s_A 52 GVKSVPALVI---DGAAFHI 68 (80)
T ss_dssp TCCEEEEEEE---TTEEEEE
T ss_pred CCCcCCEEEE---CCEEEEe
Confidence 9999999876 7887654
No 444
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.65 E-value=2.8e-08 Score=76.79 Aligned_cols=58 Identities=19% Similarity=0.308 Sum_probs=45.6
Q ss_pred EEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHHHHhc
Q 013684 240 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 319 (438)
Q Consensus 240 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~ 319 (438)
++.||++||++|+...|.|.++..+ . +..|++|.+ .++.+.|
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~--------------~-~~~vdid~~-----------------------~~l~~~~ 44 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAG--------------A-FFSVFIDDD-----------------------AALESAY 44 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCC--------------C-EEEEECTTC-----------------------HHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHh--------------h-eEEEECCCC-----------------------HHHHHHh
Confidence 6789999999999999988765321 1 466777765 5678889
Q ss_pred CcCceeeEEEECCCCcEEE
Q 013684 320 DVQGIPCLVIIGPEGKTVT 338 (438)
Q Consensus 320 ~v~~~P~~~lid~~G~i~~ 338 (438)
|++ +|++++ .+|+.+.
T Consensus 45 g~~-vPtl~~--~~G~~v~ 60 (87)
T 1ttz_A 45 GLR-VPVLRD--PMGRELD 60 (87)
T ss_dssp TTT-CSEEEC--TTCCEEE
T ss_pred CCC-cCeEEE--ECCEEEe
Confidence 998 999887 7898874
No 445
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.61 E-value=1.1e-07 Score=84.92 Aligned_cols=43 Identities=26% Similarity=0.239 Sum_probs=37.4
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 287 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d 287 (438)
.++++++.||++|||+|+.+.|.+.++.+++.+ ++.++.+.++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~----------~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ----------DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT----------TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC----------CeEEEEEecc
Confidence 579999999999999999999999998887764 4788888875
No 446
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.58 E-value=2.1e-07 Score=82.91 Aligned_cols=43 Identities=26% Similarity=0.381 Sum_probs=36.3
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 287 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d 287 (438)
.++++++.||.+|||+|..+.|.+.++.++++. ++.+..+.+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~----------~v~~~~~p~~ 63 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS----------DAYLRTEHVV 63 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT----------TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC----------ceEEEEeccc
Confidence 578999999999999999999999998887753 4777777753
No 447
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.55 E-value=1.8e-07 Score=83.25 Aligned_cols=43 Identities=21% Similarity=0.254 Sum_probs=36.1
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 287 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d 287 (438)
.++++++.||.+|||+|..+.|.+.++.+++.+ ++.+..+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~----------~v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA----------DVHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT----------TEEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC----------CeEEEEEehh
Confidence 578999999999999999999999988887754 4777766653
No 448
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.50 E-value=7.5e-08 Score=78.16 Aligned_cols=68 Identities=21% Similarity=0.363 Sum_probs=47.0
Q ss_pred CCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHH
Q 013684 236 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 315 (438)
Q Consensus 236 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 315 (438)
++.+++ ||++|||+|+.+.|.|.++.. .+.++-|+.+.+.... ...+
T Consensus 19 ~~~vv~-f~a~~C~~C~~~~~~l~~~~~--------------~~~~v~v~~~~~~~~~------------------~~~l 65 (116)
T 2e7p_A 19 SAPVVV-FSKTYCGYCNRVKQLLTQVGA--------------SYKVVELDELSDGSQL------------------QSAL 65 (116)
T ss_dssp SSSEEE-EECTTCHHHHHHHHHHHHHTC--------------CCEEEEGGGSTTHHHH------------------HHHH
T ss_pred CCCEEE-EECCCChhHHHHHHHHHHcCC--------------CeEEEEccCCCChHHH------------------HHHH
Confidence 445655 999999999999998877532 2445555444332111 2568
Q ss_pred HHhcCcCceeeEEEECCCCcEEEc
Q 013684 316 TKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 316 ~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
.+.|++.++|++ ++ +|+++..
T Consensus 66 ~~~~~v~~~Pt~-~~--~g~~v~~ 86 (116)
T 2e7p_A 66 AHWTGRGTVPNV-FI--GGKQIGG 86 (116)
T ss_dssp HHHHSCCSSCEE-EE--TTEEEEC
T ss_pred HHHhCCCCcCEE-EE--CCEEECC
Confidence 889999999999 45 6888764
No 449
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.48 E-value=3e-07 Score=70.05 Aligned_cols=66 Identities=15% Similarity=0.301 Sum_probs=49.9
Q ss_pred EEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHHHHhc
Q 013684 240 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 319 (438)
Q Consensus 240 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~ 319 (438)
++.|+++|||+|+...+.|.++.++++ ++.+..++++.+.+ ...++.+.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~-----------~i~~~~vdi~~~~~-------------------~~~~l~~~~ 52 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD-----------DFQYQYVDIRAEGI-------------------TKEDLQQKA 52 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS-----------SCEEEEECHHHHTC-------------------CSHHHHHHT
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC-----------CceEEEEecccChH-------------------HHHHHHHHh
Confidence 677999999999999999999887653 57788887753210 014678888
Q ss_pred C--cCceeeEEEECCCCcEEE
Q 013684 320 D--VQGIPCLVIIGPEGKTVT 338 (438)
Q Consensus 320 ~--v~~~P~~~lid~~G~i~~ 338 (438)
| +.++|+++ + +|+.+.
T Consensus 53 ~~~~~~vP~i~-~--~g~~i~ 70 (85)
T 1ego_A 53 GKPVETVPQIF-V--DQQHIG 70 (85)
T ss_dssp CCCSCCSCEEE-E--TTEEEE
T ss_pred CCCCceeCeEE-E--CCEEEE
Confidence 8 99999984 4 677764
No 450
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.46 E-value=6.8e-07 Score=82.48 Aligned_cols=70 Identities=16% Similarity=0.215 Sum_probs=55.6
Q ss_pred CCCEEEEEEec--CCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchh
Q 013684 235 VGKTVGLYFSA--RWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTI 312 (438)
Q Consensus 235 ~gk~vll~F~a--~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~ 312 (438)
.+++|+|.||| +||+ +.|.|.++++.+.+. +++.|+.|++|... .+.+
T Consensus 21 ~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~--------~~v~~akVDvd~~g------------------~~~~ 70 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASS--------DDLLVAEVGISDYG------------------DKLN 70 (240)
T ss_dssp GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTC--------TTEEEEEECCCCSS------------------SCCS
T ss_pred CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCC--------CCeEEEEEeCCccc------------------chhh
Confidence 36799999999 9999 999999999998642 36888888866300 0013
Q ss_pred HHHHHhcCcC--ceeeEEEECCCCc
Q 013684 313 KELTKYFDVQ--GIPCLVIIGPEGK 335 (438)
Q Consensus 313 ~~l~~~~~v~--~~P~~~lid~~G~ 335 (438)
..+++.|+|. ++||++++ ++|+
T Consensus 71 ~~l~~~~~V~~~~~PTl~~f-~~G~ 94 (240)
T 2qc7_A 71 MELSEKYKLDKESYPVFYLF-RDGD 94 (240)
T ss_dssp HHHHHHTTCCGGGCSEEEEE-ETTC
T ss_pred HHHHHHcCCCCCCCCEEEEE-eCCC
Confidence 7899999999 99999999 6776
No 451
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.44 E-value=1.8e-07 Score=74.91 Aligned_cols=63 Identities=16% Similarity=0.297 Sum_probs=51.0
Q ss_pred EEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCc
Q 013684 73 VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEG 152 (438)
Q Consensus 73 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~ 152 (438)
.+++.||++||++|+...|.|.++.+++ + +.+..|++|.+ .++..+|+++
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~---~--i~~~~vDId~d------------------------~~l~~~ygv~- 79 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKS---W--FELEVINIDGN------------------------EHLTRLYNDR- 79 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHS---C--CCCEEEETTTC------------------------HHHHHHSTTS-
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhc---C--CeEEEEECCCC------------------------HHHHHHhCCC-
Confidence 5799999999999999999999988874 2 66667777755 4567789997
Q ss_pred cceEEEecCCCCCCCcc
Q 013684 153 IPCLVVLQPYDDKDDAT 169 (438)
Q Consensus 153 ~P~~~lvd~~~~~G~v~ 169 (438)
+|+++++. +|+.+
T Consensus 80 VP~l~~~~----dG~~v 92 (107)
T 2fgx_A 80 VPVLFAVN----EDKEL 92 (107)
T ss_dssp CSEEEETT----TTEEE
T ss_pred CceEEEEE----CCEEE
Confidence 99998876 67655
No 452
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.41 E-value=6.2e-07 Score=81.50 Aligned_cols=88 Identities=18% Similarity=0.258 Sum_probs=58.0
Q ss_pred EeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCC---CH----------------HHHHHh
Q 013684 64 VKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE---DL----------------NAFNNY 124 (438)
Q Consensus 64 v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~---~~----------------~~~~~~ 124 (438)
+.+...++|++++.||++|||+|+++.|.|.++.+ .+ ++++++.+.. .. ..|.++
T Consensus 79 ~~~g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~----~~--v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~ 152 (216)
T 1eej_A 79 IVYKAPQEKHVITVFTDITCGYCHKLHEQMADYNA----LG--ITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDV 152 (216)
T ss_dssp EEECCTTCCEEEEEEECTTCHHHHHHHTTHHHHHH----TT--EEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHH
T ss_pred eeecCCCCCEEEEEEECCCCHHHHHHHHHHHHHHh----CC--cEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHH
Confidence 44555678999999999999999999999988754 23 7777765421 11 123333
Q ss_pred HhcCCcc--cccCCChHHHHHHhhhcCcCccceEEE
Q 013684 125 RACMPWL--AVPYSDLETKKALNRKFDIEGIPCLVV 158 (438)
Q Consensus 125 ~~~~~~~--~~~~~d~~~~~~l~~~~~v~~~P~~~l 158 (438)
+...+.. ... ...+....+++.|+|.++|++++
T Consensus 153 ~~~~~~~~~~~~-~~v~~~~~l~~~~gV~gtPt~v~ 187 (216)
T 1eej_A 153 MAGKSVAPASCD-VDIADHYALGVQLGVSGTPAVVL 187 (216)
T ss_dssp HTTCCCCCCCCS-CCHHHHHHHHHHHTCCSSSEEEC
T ss_pred HhCCCCChhHHH-HHHHHHHHHHHHcCCCccCEEEE
Confidence 3322211 111 13344578999999999999854
No 453
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.39 E-value=6.8e-07 Score=70.80 Aligned_cols=63 Identities=16% Similarity=0.204 Sum_probs=47.5
Q ss_pred CCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHH
Q 013684 236 GKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 315 (438)
Q Consensus 236 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 315 (438)
.+++++.|+++|||+|+...+.|.++.+ ++.+..|++|... ..++
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~--------------~i~~~~vdi~~~~---------------------~~el 59 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKD--------------RFILQEVDITLPE---------------------NSTW 59 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSS--------------SSEEEEEETTSST---------------------THHH
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhh--------------CCeEEEEECCCcc---------------------hHHH
Confidence 4568888999999999999998876532 3678888887221 2678
Q ss_pred HHhcCcCceeeEEEECCCCcEE
Q 013684 316 TKYFDVQGIPCLVIIGPEGKTV 337 (438)
Q Consensus 316 ~~~~~v~~~P~~~lid~~G~i~ 337 (438)
.+.|| .++|+++ + +|+.+
T Consensus 60 ~~~~g-~~vP~l~-~--~g~~~ 77 (100)
T 1wjk_A 60 YERYK-FDIPVFH-L--NGQFL 77 (100)
T ss_dssp HHHSS-SSCSEEE-E--SSSEE
T ss_pred HHHHC-CCCCEEE-E--CCEEE
Confidence 88999 9999764 4 57665
No 454
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.36 E-value=2e-06 Score=76.31 Aligned_cols=42 Identities=21% Similarity=0.281 Sum_probs=35.4
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEec
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVST 286 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~ 286 (438)
.++++++.||.++||+|..+.+.+.++.+++.+ ++.+..+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~----------~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK----------DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT----------TEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC----------ceEEEEeCc
Confidence 578899999999999999999999988877653 477777765
No 455
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.35 E-value=5.7e-06 Score=75.62 Aligned_cols=171 Identities=12% Similarity=0.107 Sum_probs=103.5
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+++++|-|+++| |....+.+.++++.+. ++.+..+ .+ .++++.|+
T Consensus 26 ~~~v~vVgff~~~---~~~~~~~f~~~A~~l~----~~~F~~t-~~--------------------------~~v~~~~~ 71 (227)
T 4f9z_D 26 ATEVAVIGFFQDL---EIPAVPILHSMVQKFP----GVSFGIS-TD--------------------------SEVLTHYN 71 (227)
T ss_dssp TSSEEEEEECSCS---CSTHHHHHHHHTTTCT----TSEEEEE-CC--------------------------HHHHHHTT
T ss_pred cCCeEEEEEecCC---CchhHHHHHHHHHhCC----CceEEEE-CC--------------------------HHHHHHcC
Confidence 3579999999998 4568888888888872 2544432 11 56788899
Q ss_pred cCccceEEEecCCCCCCC--cccccchhHHhhhCCCCccCChhHHHHHHHHHHhhhhHHHHHhhhhcCCCCCccCCCCCc
Q 013684 150 IEGIPCLVVLQPYDDKDD--ATLHDGVELIYKYGIRAFPFTKEKLEELQKEEKEKHERQTLINLLTNHDRGYLLGHPPDE 227 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~--v~~~~~~~~i~~~~~~a~p~~~e~l~~L~~~~~~~~~~~~~~~~~g~~~~~f~l~~~g~~ 227 (438)
+.. |+++++.+ ... ..+. +. . .+ +.+.+.+..+.... ..|-+. ..+..
T Consensus 72 v~~-p~i~lfk~---~~~~~~~~~-~~-~---~g----~~~~~~l~~fi~~~---------------~~plv~-e~t~~- 121 (227)
T 4f9z_D 72 ITG-NTICLFRL---VDNEQLNLE-DE-D---IE----SIDATKLSRFIEIN---------------SLHMVT-EYNPV- 121 (227)
T ss_dssp CCS-SEEEEEET---TTTEEEEEC-HH-H---HH----TCCHHHHHHHHHHH---------------CCCSEE-ECCHH-
T ss_pred CCC-CeEEEEEe---cCccccccc-cc-c---cC----CCCHHHHHHHHHHh---------------CCCcee-ecCcc-
Confidence 997 99999885 221 1111 00 0 00 12223333222211 112111 11111
Q ss_pred eeeccccCC-CEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccc
Q 013684 228 KVPVSSLVG-KTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALP 306 (438)
Q Consensus 228 ~~~l~~~~g-k~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p 306 (438)
.+..---.+ +.+++.|..+||+.|....+.+.+++++++++ +.++.+..+...
T Consensus 122 n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~----------i~F~~vd~~~~~---------------- 175 (227)
T 4f9z_D 122 TVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK----------ILFILVDSGMKE---------------- 175 (227)
T ss_dssp HHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT----------CEEEEEETTSGG----------------
T ss_pred cHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC----------EEEEEeCCccHh----------------
Confidence 110000123 35666677889999999999999999999864 677777766321
Q ss_pred cCCchhHHHHHhcCcC--ceeeEEEECCCCc
Q 013684 307 FGDPTIKELTKYFDVQ--GIPCLVIIGPEGK 335 (438)
Q Consensus 307 ~~~d~~~~l~~~~~v~--~~P~~~lid~~G~ 335 (438)
.+.+.+.||+. .+|++.+++..+.
T Consensus 176 -----~~~~l~~fgl~~~~~P~~~i~~~~~~ 201 (227)
T 4f9z_D 176 -----NGKVISFFKLKESQLPALAIYQTLDD 201 (227)
T ss_dssp -----GHHHHHHTTCCGGGCSEEEEEESSSC
T ss_pred -----HHHHHHHcCCCcccCCEEEEEECCCC
Confidence 24567889998 8999999986554
No 456
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.35 E-value=3.8e-07 Score=76.22 Aligned_cols=63 Identities=13% Similarity=0.177 Sum_probs=53.3
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
.+++|+++|||+ |++|+.+.|.|.+++++++++ +.++.|++|.. ..++..||
T Consensus 22 ~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk---~~f~~vd~d~~------------------------~~~a~~~g 73 (133)
T 2djk_A 22 AGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV---INFGTIDAKAF------------------------GAHAGNLN 73 (133)
T ss_dssp TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT---SEEEEECTTTT------------------------GGGTTTTT
T ss_pred CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe---EEEEEEchHHh------------------------HHHHHHcC
Confidence 357899999999 899999999999999998654 77777776633 45788899
Q ss_pred cCc--cceEEEec
Q 013684 150 IEG--IPCLVVLQ 160 (438)
Q Consensus 150 v~~--~P~~~lvd 160 (438)
|+. +|++++++
T Consensus 74 i~~~~iPtl~i~~ 86 (133)
T 2djk_A 74 LKTDKFPAFAIQE 86 (133)
T ss_dssp CCSSSSSEEEEEC
T ss_pred CCcccCCEEEEEe
Confidence 999 99999998
No 457
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.35 E-value=2.1e-07 Score=71.77 Aligned_cols=57 Identities=18% Similarity=0.255 Sum_probs=43.3
Q ss_pred EEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccc
Q 013684 75 ALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIP 154 (438)
Q Consensus 75 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P 154 (438)
++.||++||++|+...|.|.++..++ +..|++|.+ .++.++|+++ +|
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~--------~~~vdid~~------------------------~~l~~~~g~~-vP 49 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA--------FFSVFIDDD------------------------AALESAYGLR-VP 49 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC--------EEEEECTTC------------------------HHHHHHHTTT-CS
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh--------eEEEECCCC------------------------HHHHHHhCCC-cC
Confidence 78899999999999999887643321 345666654 5677889998 99
Q ss_pred eEEEecCCCCCCCcc
Q 013684 155 CLVVLQPYDDKDDAT 169 (438)
Q Consensus 155 ~~~lvd~~~~~G~v~ 169 (438)
++++ . +|+.+
T Consensus 50 tl~~--~---~G~~v 59 (87)
T 1ttz_A 50 VLRD--P---MGREL 59 (87)
T ss_dssp EEEC--T---TCCEE
T ss_pred eEEE--E---CCEEE
Confidence 9887 5 77766
No 458
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.34 E-value=3.8e-07 Score=68.92 Aligned_cols=58 Identities=19% Similarity=0.271 Sum_probs=43.2
Q ss_pred EEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccc
Q 013684 75 ALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIP 154 (438)
Q Consensus 75 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P 154 (438)
++.||++|||+|+.+.|.|.++.+++ + +.+..+.+|.+.+ + .++.+.|++.++|
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~---~--~~~~~~~v~~~~~-----------------~----~~~~~~~gv~~vP 57 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPS---K--YTVEIVHLGTDKA-----------------R----IAEAEKAGVKSVP 57 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTT---T--EEEEEEETTTCSS-----------------T----HHHHHHHTCCEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhc---C--CeEEEEEecCChh-----------------h----HHHHHHcCCCcCC
Confidence 67899999999999999988876553 2 5555666664311 0 4667889999999
Q ss_pred eEEE
Q 013684 155 CLVV 158 (438)
Q Consensus 155 ~~~l 158 (438)
++++
T Consensus 58 t~~i 61 (80)
T 2k8s_A 58 ALVI 61 (80)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9876
No 459
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.34 E-value=2.4e-07 Score=75.13 Aligned_cols=68 Identities=16% Similarity=0.209 Sum_probs=44.7
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
+++.+++ ||++|||+|+.+.|.|.++.. .+.++.|+.+.... .....+.+.|+
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~~~l~~~~~-------~~~~v~v~~~~~~~-------------------~~~~~l~~~~~ 70 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVKQLLTQVGA-------SYKVVELDELSDGS-------------------QLQSALAHWTG 70 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHHHHHHHHTC-------CCEEEEGGGSTTHH-------------------HHHHHHHHHHS
T ss_pred cCCCEEE-EECCCChhHHHHHHHHHHcCC-------CeEEEEccCCCChH-------------------HHHHHHHHHhC
Confidence 3456666 999999999999998877632 24444333332211 11257888999
Q ss_pred cCccceEEEecCCCCCCCccc
Q 013684 150 IEGIPCLVVLQPYDDKDDATL 170 (438)
Q Consensus 150 v~~~P~~~lvd~~~~~G~v~~ 170 (438)
+.++|++ ++ +|+.+.
T Consensus 71 v~~~Pt~-~~-----~g~~v~ 85 (116)
T 2e7p_A 71 RGTVPNV-FI-----GGKQIG 85 (116)
T ss_dssp CCSSCEE-EE-----TTEEEE
T ss_pred CCCcCEE-EE-----CCEEEC
Confidence 9999999 33 555553
No 460
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.33 E-value=1.7e-06 Score=76.98 Aligned_cols=43 Identities=23% Similarity=0.278 Sum_probs=37.7
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD 115 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D 115 (438)
.++++++.||++|||+|+.+.|.|.++.+++.+ ++.+..++++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ---DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT---TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC---CeEEEEEecc
Confidence 579999999999999999999999999888754 3888888875
No 461
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.31 E-value=1.2e-06 Score=76.52 Aligned_cols=50 Identities=16% Similarity=0.201 Sum_probs=39.3
Q ss_pred CCEEeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEec
Q 013684 61 GEEVKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSS 114 (438)
Q Consensus 61 g~~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~ 114 (438)
+....+....++++++.||.+|||+|+.+.|.|.++.+++. ++.++++.+
T Consensus 12 ~~~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~----~v~~~~~~~ 61 (175)
T 3gyk_A 12 PNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP----NVRLVYREW 61 (175)
T ss_dssp TTSCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT----TEEEEEEEC
T ss_pred CCCCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCC----CEEEEEEeC
Confidence 33455666778999999999999999999999999888753 256666553
No 462
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.31 E-value=3.1e-06 Score=78.21 Aligned_cols=96 Identities=9% Similarity=0.109 Sum_probs=60.7
Q ss_pred eeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC---CCHH-------------H
Q 013684 229 VPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD---RDQT-------------S 292 (438)
Q Consensus 229 ~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d---~~~~-------------~ 292 (438)
+.+....++++++.|+.+|||+|+++.+.+.++.+. + ++.|+.+.+. .+.. .
T Consensus 90 i~~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g----------~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~ 157 (241)
T 1v58_A 90 LLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS--G----------KVQLRTLLVGVIKPESPATAAAILASKDPAK 157 (241)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT--T----------SEEEEEEECCCSSTTHHHHHHHHHHSSSHHH
T ss_pred ceECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC--C----------cEEEEEEECCcCCCcHHHHHHHHHHccCHHH
Confidence 444444578999999999999999999998876553 1 4777766652 1111 1
Q ss_pred -HHHHHhcCC--Ccc--------cccCCchhHHHHHhcCcCceeeEEEECCCCcE
Q 013684 293 -FESYFGTMP--WLA--------LPFGDPTIKELTKYFDVQGIPCLVIIGPEGKT 336 (438)
Q Consensus 293 -~~~~~~~~~--~~~--------~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i 336 (438)
|..+...+. .+. .....+.+.++.+.+||+++|++++.|.+|++
T Consensus 158 ~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~ 212 (241)
T 1v58_A 158 TWQQYEASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL 212 (241)
T ss_dssp HHHHHHHTTTCCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE
T ss_pred HHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE
Confidence 111111110 000 00012345678899999999999999888975
No 463
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.29 E-value=1.9e-06 Score=78.06 Aligned_cols=85 Identities=20% Similarity=0.189 Sum_probs=54.5
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCC---CH----------------HHHHH
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDR---DQ----------------TSFES 295 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~---~~----------------~~~~~ 295 (438)
.++++++.||++|||+|+++.|.+.++.+ . ++.|..+.... .. ..|..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~----~---------~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~ 151 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYND----L---------GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNE 151 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHH----T---------TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHH
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHh----C---------CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHH
Confidence 47899999999999999999999887543 2 36666554421 11 11222
Q ss_pred HHhcCCCcc---cccCCchhHHHHHhcCcCceeeEEEECCCCc
Q 013684 296 YFGTMPWLA---LPFGDPTIKELTKYFDVQGIPCLVIIGPEGK 335 (438)
Q Consensus 296 ~~~~~~~~~---~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~ 335 (438)
++...+ +. .....+.+.++.+.+||+++||+++ .+|+
T Consensus 152 ~~~~~~-~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi--~nG~ 191 (211)
T 1t3b_A 152 AEKGNL-PKEVKTPNIVKKHYELGIQFGVRGTPSIVT--STGE 191 (211)
T ss_dssp HHTTCC-CSSCCCSSHHHHHHHHHHHHTCCSSCEEEC--TTSC
T ss_pred HHcCCC-CChHHHHHHHHHHHHHHHHcCCCcCCEEEE--eCCE
Confidence 222111 11 1112235678899999999999887 4676
No 464
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.29 E-value=1.7e-06 Score=89.29 Aligned_cols=69 Identities=13% Similarity=0.157 Sum_probs=58.2
Q ss_pred cCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhH
Q 013684 234 LVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIK 313 (438)
Q Consensus 234 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~ 313 (438)
..++..++.||++|||+|+.+.|.++++...+. ++.+..|+.+.. +
T Consensus 115 ~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-----------~v~~~~vd~~~~-----------------------~ 160 (521)
T 1hyu_A 115 IDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-----------RIKHTAIDGGTF-----------------------Q 160 (521)
T ss_dssp CCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-----------TEEEEEEETTTC-----------------------H
T ss_pred cCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-----------ceEEEEEechhh-----------------------H
Confidence 346788999999999999999999999877654 478888887754 6
Q ss_pred HHHHhcCcCceeeEEEECCCCcEEEc
Q 013684 314 ELTKYFDVQGIPCLVIIGPEGKTVTK 339 (438)
Q Consensus 314 ~l~~~~~v~~~P~~~lid~~G~i~~~ 339 (438)
++.+.|+|.++|++++ +|+.+..
T Consensus 161 ~~~~~~~i~svPt~~i---~g~~~~~ 183 (521)
T 1hyu_A 161 NEITERNVMGVPAVFV---NGKEFGQ 183 (521)
T ss_dssp HHHHHTTCCSSSEEEE---TTEEEEE
T ss_pred HHHHHhCCCccCEEEE---CCEEEec
Confidence 7899999999999977 8888865
No 465
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.24 E-value=2.9e-06 Score=78.55 Aligned_cols=65 Identities=12% Similarity=0.311 Sum_probs=53.6
Q ss_pred CCCEEEEEEe--ccCCccchhhHHHHHHHHHHHhc-CCCCEEEEEEecCC--CHHHHHHhHhcCCcccccCCChHHHHHH
Q 013684 70 EGKVTALYFS--ANWYPPCGNFTGVLVDVYEELRN-NGSDFEVVFVSSDE--DLNAFNNYRACMPWLAVPYSDLETKKAL 144 (438)
Q Consensus 70 ~gk~vll~F~--a~wC~~C~~~~p~l~~l~~~~~~-~~~~~~iv~vs~D~--~~~~~~~~~~~~~~~~~~~~d~~~~~~l 144 (438)
.+++|||.|| |+||+ +.|.|.+++++++. . .++.|+.|++|. +.+ ...+
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~-~~v~~akVD~d~~g~~~---------------------n~~l 85 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKAT-KDLLIATVGVKDYGELE---------------------NKAL 85 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHC-SSEEEEEEEECSSTTCT---------------------THHH
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccC-CCeEEEEEECCcccccc---------------------cHHH
Confidence 4689999999 99998 99999999999976 3 258888887764 100 1689
Q ss_pred hhhcCcC--ccceEEEec
Q 013684 145 NRKFDIE--GIPCLVVLQ 160 (438)
Q Consensus 145 ~~~~~v~--~~P~~~lvd 160 (438)
++.|+|. ++||++++.
T Consensus 86 a~~~~V~~~~~PTl~~F~ 103 (248)
T 2c0g_A 86 GDRYKVDDKNFPSIFLFK 103 (248)
T ss_dssp HHHTTCCTTSCCEEEEES
T ss_pred HHHhCCCcCCCCeEEEEe
Confidence 9999999 999999985
No 466
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.20 E-value=5.3e-06 Score=73.87 Aligned_cols=43 Identities=23% Similarity=0.302 Sum_probs=36.3
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 287 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d 287 (438)
.++++++.||..|||+|..+.|.+.++.+++.+ ++.+..+.++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~----------~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD----------DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT----------TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC----------CeEEEEecCC
Confidence 478999999999999999999999988877654 3777777765
No 467
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.20 E-value=1.1e-05 Score=70.32 Aligned_cols=52 Identities=12% Similarity=0.158 Sum_probs=42.0
Q ss_pred eeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC
Q 013684 228 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD 287 (438)
Q Consensus 228 ~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d 287 (438)
.+.+.+..++++++.|+..+||+|..+.+.+.++.++|.+. ++++++...+.
T Consensus 19 ~~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~--------~~v~~~~~~~~ 70 (175)
T 1z6m_A 19 GLHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKS--------GKVERIIKLFD 70 (175)
T ss_dssp SEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHT--------TSEEEEEEECC
T ss_pred CcccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhC--------CcEEEEEEeCC
Confidence 35566667899999999999999999999999998888432 25888887663
No 468
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.19 E-value=3.3e-07 Score=86.74 Aligned_cols=73 Identities=15% Similarity=0.366 Sum_probs=49.6
Q ss_pred eeeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCccccc
Q 013684 228 KVPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPF 307 (438)
Q Consensus 228 ~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~ 307 (438)
.+.+.+..++..+++|||+|||+|+++.|.++++.+++ . .|.+|....
T Consensus 189 ~~~la~~l~~~~vV~F~A~WC~~Ck~l~p~le~lA~~l--------------~--~Vd~d~~d~---------------- 236 (291)
T 3kp9_A 189 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQV--------------P--YVECSPNGP---------------- 236 (291)
T ss_dssp HHHHHHHHHHTTCEEEECTTCHHHHHHHHHHGGGGGGS--------------C--EEESCSSCS----------------
T ss_pred HHHHHHHhCCCCEEEEECCCCHHHHHHHHHHHHHHHHc--------------C--EEEEeecCc----------------
Confidence 44555544445579999999999999999999876432 2 344442100
Q ss_pred CCchhHHHHHhcCcCceeeEEEECCCCcE
Q 013684 308 GDPTIKELTKYFDVQGIPCLVIIGPEGKT 336 (438)
Q Consensus 308 ~~d~~~~l~~~~~v~~~P~~~lid~~G~i 336 (438)
.+...+++++|+|+++||+++ +|+.
T Consensus 237 -~~~~~~la~~~gI~~vPT~~i---~G~~ 261 (291)
T 3kp9_A 237 -GTPQAQECTEAGITSYPTWII---NGRT 261 (291)
T ss_dssp -SSCCCHHHHTTTCCSTTEEEE---TTEE
T ss_pred -hhhHHHHHHHcCCcccCeEEE---CCEE
Confidence 011378899999999999554 6764
No 469
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.18 E-value=3.3e-06 Score=77.81 Aligned_cols=64 Identities=17% Similarity=0.301 Sum_probs=53.6
Q ss_pred CCCEEEEEEec--cCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCC---CHHHHHHhHhcCCcccccCCChHHHHHH
Q 013684 70 EGKVTALYFSA--NWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE---DLNAFNNYRACMPWLAVPYSDLETKKAL 144 (438)
Q Consensus 70 ~gk~vll~F~a--~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~---~~~~~~~~~~~~~~~~~~~~d~~~~~~l 144 (438)
.+++|+|.||| +||+ +.|.|.++++.+++. .++.++.|++|+ +.. ..+
T Consensus 21 ~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~-~~v~~akVDvd~~g~~~~----------------------~~l 73 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASS-DDLLVAEVGISDYGDKLN----------------------MEL 73 (240)
T ss_dssp GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTC-TTEEEEEECCCCSSSCCS----------------------HHH
T ss_pred CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCC-CCeEEEEEeCCcccchhh----------------------HHH
Confidence 46899999999 9999 899999999999763 358888887663 211 789
Q ss_pred hhhcCcC--ccceEEEec
Q 013684 145 NRKFDIE--GIPCLVVLQ 160 (438)
Q Consensus 145 ~~~~~v~--~~P~~~lvd 160 (438)
++.|+|. ++||++++.
T Consensus 74 ~~~~~V~~~~~PTl~~f~ 91 (240)
T 2qc7_A 74 SEKYKLDKESYPVFYLFR 91 (240)
T ss_dssp HHHTTCCGGGCSEEEEEE
T ss_pred HHHcCCCCCCCCEEEEEe
Confidence 9999999 999999997
No 470
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.09 E-value=4.6e-06 Score=74.62 Aligned_cols=44 Identities=18% Similarity=0.285 Sum_probs=37.1
Q ss_pred CCCEEEEEEecCCChhhhhhhHHH---HHHHHHHHhhhhhcCCCCCCEEEEEEecCC
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTDR 288 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~vv~is~d~ 288 (438)
.+++++|.||+.|||+|+.+.|.| .++.+++++ ++.+..+.++.
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~----------~v~~~~~~v~~ 158 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE----------GVKMTKYHVNF 158 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT----------TCCEEEEECSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC----------CCEEEEeccCc
Confidence 468999999999999999999998 887777754 47888888864
No 471
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.08 E-value=2.8e-06 Score=64.49 Aligned_cols=59 Identities=20% Similarity=0.330 Sum_probs=45.0
Q ss_pred EEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC--cCc
Q 013684 75 ALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD--IEG 152 (438)
Q Consensus 75 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~--v~~ 152 (438)
++.|+++|||+|+...+.|.++.++++ ++.+..++++.+.. . ..++.+.++ +..
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~----~i~~~~vdi~~~~~-----------------~---~~~l~~~~~~~~~~ 58 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD----DFQYQYVDIRAEGI-----------------T---KEDLQQKAGKPVET 58 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS----SCEEEEECHHHHTC-----------------C---SHHHHHHTCCCSCC
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC----CceEEEEecccChH-----------------H---HHHHHHHhCCCCce
Confidence 678999999999999999999887752 37777777653211 0 046788888 999
Q ss_pred cceEE
Q 013684 153 IPCLV 157 (438)
Q Consensus 153 ~P~~~ 157 (438)
+|+++
T Consensus 59 vP~i~ 63 (85)
T 1ego_A 59 VPQIF 63 (85)
T ss_dssp SCEEE
T ss_pred eCeEE
Confidence 99984
No 472
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.08 E-value=9.2e-06 Score=73.44 Aligned_cols=83 Identities=16% Similarity=0.135 Sum_probs=52.4
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCC---CH----------------HHHHHhHhcCCc
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDE---DL----------------NAFNNYRACMPW 130 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~---~~----------------~~~~~~~~~~~~ 130 (438)
.++++++.|+.+|||+|+++.|.|.++.+ .+ +++.++.+.- .. ..|.+++...+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~----~~--v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~ 158 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYND----LG--ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLP 158 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHH----TT--EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHh----CC--cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCC
Confidence 57899999999999999999999888543 23 6666654421 11 112222221111
Q ss_pred cc-ccCCChHHHHHHhhhcCcCccceEEE
Q 013684 131 LA-VPYSDLETKKALNRKFDIEGIPCLVV 158 (438)
Q Consensus 131 ~~-~~~~d~~~~~~l~~~~~v~~~P~~~l 158 (438)
.. -.-...+....+++.++|+++|++++
T Consensus 159 ~~~~~~~~v~~~~~l~~~~gV~gTPt~vi 187 (211)
T 1t3b_A 159 KEVKTPNIVKKHYELGIQFGVRGTPSIVT 187 (211)
T ss_dssp SSCCCSSHHHHHHHHHHHHTCCSSCEEEC
T ss_pred ChHHHHHHHHHHHHHHHHcCCCcCCEEEE
Confidence 00 00112234578899999999999887
No 473
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.03 E-value=2.1e-06 Score=67.88 Aligned_cols=57 Identities=18% Similarity=0.183 Sum_probs=43.0
Q ss_pred CCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCc
Q 013684 71 GKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDI 150 (438)
Q Consensus 71 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v 150 (438)
.+++++.|+++|||+|+...+.|.++.+ ++.+..|++|.... .++.+.|+
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~-------~i~~~~vdi~~~~~----------------------~el~~~~g- 64 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKD-------RFILQEVDITLPEN----------------------STWYERYK- 64 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSS-------SSEEEEEETTSSTT----------------------HHHHHHSS-
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhh-------CCeEEEEECCCcch----------------------HHHHHHHC-
Confidence 4678999999999999999988775432 26677777762211 67888999
Q ss_pred CccceEE
Q 013684 151 EGIPCLV 157 (438)
Q Consensus 151 ~~~P~~~ 157 (438)
..+|+++
T Consensus 65 ~~vP~l~ 71 (100)
T 1wjk_A 65 FDIPVFH 71 (100)
T ss_dssp SSCSEEE
T ss_pred CCCCEEE
Confidence 9999764
No 474
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.02 E-value=1.1e-05 Score=71.54 Aligned_cols=42 Identities=21% Similarity=0.318 Sum_probs=36.1
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEec
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSS 114 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~ 114 (438)
.+++++++||..|||+|..+.|.|.++.++++. ++.+..+.+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS---DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT---TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC---ceEEEEecc
Confidence 578999999999999999999999999888743 377777775
No 475
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.94 E-value=1.5e-05 Score=70.59 Aligned_cols=42 Identities=24% Similarity=0.300 Sum_probs=36.0
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEec
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSS 114 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~ 114 (438)
.++++++.||..|||+|+.+.|.|.++.+++.+ ++.+..+.+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA---DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT---TEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC---CeEEEEEeh
Confidence 689999999999999999999999998888754 377776665
No 476
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.94 E-value=3.9e-05 Score=70.79 Aligned_cols=97 Identities=10% Similarity=0.084 Sum_probs=61.3
Q ss_pred EeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC---C-------------CHHHHHHhHh-
Q 013684 64 VKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD---E-------------DLNAFNNYRA- 126 (438)
Q Consensus 64 v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D---~-------------~~~~~~~~~~- 126 (438)
+.+-...++++++.|+.+|||+|+++.+.+.++.+. | +++++.+.+- . ++..+.++..
T Consensus 90 i~~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~----g-~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~ 164 (241)
T 1v58_A 90 LLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS----G-KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEA 164 (241)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT----T-SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHH
T ss_pred ceECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC----C-cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHH
Confidence 445555689999999999999999999998876654 2 4777776652 1 1111111111
Q ss_pred cCC---cccccCC------ChHHHHHHhhhcCcCccceEEEecCCCCCCCc
Q 013684 127 CMP---WLAVPYS------DLETKKALNRKFDIEGIPCLVVLQPYDDKDDA 168 (438)
Q Consensus 127 ~~~---~~~~~~~------d~~~~~~l~~~~~v~~~P~~~lvd~~~~~G~v 168 (438)
.+. ....... ..+....+.+.++|.++|++++.+. +|++
T Consensus 165 ~~~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~---~G~~ 212 (241)
T 1v58_A 165 SGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSK---ENTL 212 (241)
T ss_dssp TTTCCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEET---TTEE
T ss_pred HhccCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECC---CCCE
Confidence 111 0000000 1123467888999999999999987 7854
No 477
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.92 E-value=1.5e-05 Score=82.21 Aligned_cols=62 Identities=10% Similarity=0.098 Sum_probs=51.9
Q ss_pred cCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhc
Q 013684 69 LEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKF 148 (438)
Q Consensus 69 ~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 148 (438)
..++..++.||++|||+|+.+.|.|.++..++. ++.+..|+.|.. .++.+.|
T Consensus 115 ~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~----~v~~~~vd~~~~------------------------~~~~~~~ 166 (521)
T 1hyu_A 115 IDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP----RIKHTAIDGGTF------------------------QNEITER 166 (521)
T ss_dssp CCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT----TEEEEEEETTTC------------------------HHHHHHT
T ss_pred cCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC----ceEEEEEechhh------------------------HHHHHHh
Confidence 346788999999999999999999999887753 377777766633 6789999
Q ss_pred CcCccceEEE
Q 013684 149 DIEGIPCLVV 158 (438)
Q Consensus 149 ~v~~~P~~~l 158 (438)
+|.++|++++
T Consensus 167 ~i~svPt~~i 176 (521)
T 1hyu_A 167 NVMGVPAVFV 176 (521)
T ss_dssp TCCSSSEEEE
T ss_pred CCCccCEEEE
Confidence 9999999977
No 478
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=97.84 E-value=2.9e-06 Score=80.22 Aligned_cols=67 Identities=12% Similarity=0.345 Sum_probs=46.3
Q ss_pred EeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCCh-HHHH
Q 013684 64 VKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDL-ETKK 142 (438)
Q Consensus 64 v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~-~~~~ 142 (438)
+.+.+.-++..+++|||+|||+|+++.|.+.++.+++ . .|.+|.+ +. +...
T Consensus 190 ~~la~~l~~~~vV~F~A~WC~~Ck~l~p~le~lA~~l-------~--~Vd~d~~-------------------d~~~~~~ 241 (291)
T 3kp9_A 190 VGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQV-------P--YVECSPN-------------------GPGTPQA 241 (291)
T ss_dssp HHHHHHHHHTTCEEEECTTCHHHHHHHHHHGGGGGGS-------C--EEESCSS-------------------CSSSCCC
T ss_pred HHHHHHhCCCCEEEEECCCCHHHHHHHHHHHHHHHHc-------C--EEEEeec-------------------CchhhHH
Confidence 3444443445579999999999999999999887553 1 3444421 10 1116
Q ss_pred HHhhhcCcCccceEEE
Q 013684 143 ALNRKFDIEGIPCLVV 158 (438)
Q Consensus 143 ~l~~~~~v~~~P~~~l 158 (438)
+++++|+|+++||+++
T Consensus 242 ~la~~~gI~~vPT~~i 257 (291)
T 3kp9_A 242 QECTEAGITSYPTWII 257 (291)
T ss_dssp HHHHTTTCCSTTEEEE
T ss_pred HHHHHcCCcccCeEEE
Confidence 8899999999999655
No 479
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.83 E-value=4.9e-05 Score=56.95 Aligned_cols=59 Identities=12% Similarity=0.255 Sum_probs=41.2
Q ss_pred EEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHHHHhc
Q 013684 240 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 319 (438)
Q Consensus 240 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~ 319 (438)
++.|+++|||+|+...+.|.++ ++.+..++++.+.+. .+..+.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~----------------~i~~~~vdi~~~~~~--------------------~~~~~~~ 46 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR----------------GFDFEMINVDRVPEA--------------------AEALRAQ 46 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT----------------TCCCEEEETTTCHHH--------------------HHHHHHT
T ss_pred EEEEcCCCChhHHHHHHHHHHC----------------CCCeEEEECCCCHHH--------------------HHHHHHh
Confidence 5679999999999988877642 356777888765421 1223358
Q ss_pred CcCceeeEEEECCCCcEE
Q 013684 320 DVQGIPCLVIIGPEGKTV 337 (438)
Q Consensus 320 ~v~~~P~~~lid~~G~i~ 337 (438)
|+.++|+++ + +|+.+
T Consensus 47 g~~~vP~~~-~--~g~~~ 61 (81)
T 1h75_A 47 GFRQLPVVI-A--GDLSW 61 (81)
T ss_dssp TCCSSCEEE-E--TTEEE
T ss_pred CCCccCEEE-E--CCEEE
Confidence 999999984 4 56554
No 480
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.82 E-value=5.7e-05 Score=55.49 Aligned_cols=59 Identities=12% Similarity=0.218 Sum_probs=41.0
Q ss_pred EEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHHHHhc
Q 013684 240 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKYF 319 (438)
Q Consensus 240 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~~ 319 (438)
++.|+++|||+|+...+.|.++ ++.+..++++.+.+. .+..+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~----------------~i~~~~~di~~~~~~--------------------~~~~~~~ 46 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA----------------GLAYNTVDISLDDEA--------------------RDYVMAL 46 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT----------------TCCCEEEETTTCHHH--------------------HHHHHHT
T ss_pred EEEEeCCCChHHHHHHHHHHHc----------------CCCcEEEECCCCHHH--------------------HHHHHHc
Confidence 5678999999999988877643 355677777765321 1122468
Q ss_pred CcCceeeEEEECCCCcEE
Q 013684 320 DVQGIPCLVIIGPEGKTV 337 (438)
Q Consensus 320 ~v~~~P~~~lid~~G~i~ 337 (438)
++.++|+++ + +|+.+
T Consensus 47 ~~~~vP~l~-~--~g~~~ 61 (75)
T 1r7h_A 47 GYVQAPVVE-V--DGEHW 61 (75)
T ss_dssp TCBCCCEEE-E--TTEEE
T ss_pred CCCccCEEE-E--CCeEE
Confidence 999999987 3 56654
No 481
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.76 E-value=0.00014 Score=61.65 Aligned_cols=92 Identities=20% Similarity=0.262 Sum_probs=57.3
Q ss_pred eeccccCCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecC-----CCH-------------
Q 013684 229 VPVSSLVGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTD-----RDQ------------- 290 (438)
Q Consensus 229 ~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d-----~~~------------- 290 (438)
+.+..-.++++++.|+.++||+|+++.+.+.++ . ++.|+.+..- .+.
T Consensus 7 i~~~~~~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~-----------~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~ 71 (147)
T 3gv1_A 7 IKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEKM----T-----------DVTVYSFMMPIAGLHPDAARKAQILWCQPDR 71 (147)
T ss_dssp EEEEETTCCEEEEEEECTTCHHHHHHHHHHTTC----C-----------SEEEEEEECCCTTTCTTHHHHHHHHHTSSSH
T ss_pred eeeecCCCCEEEEEEECCCChhHHHHHHHHhhc----C-----------ceEEEEEEccccccChhHHHHHHHHHcCCCH
Confidence 344444678999999999999999999987653 2 3666665431 111
Q ss_pred -HHHHHHHhcCCC----cccccCCchhHHHHHhcCcCceeeEEEECCCCcEE
Q 013684 291 -TSFESYFGTMPW----LALPFGDPTIKELTKYFDVQGIPCLVIIGPEGKTV 337 (438)
Q Consensus 291 -~~~~~~~~~~~~----~~~p~~~d~~~~l~~~~~v~~~P~~~lid~~G~i~ 337 (438)
..|..++..... -...-..+.+..+++.+||+++||+++ .+|+++
T Consensus 72 ~~a~~~~~~~g~~~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi--~nG~~i 121 (147)
T 3gv1_A 72 AKAWTDWMRKGKFPVGGSICDNPVAETTSLGEQFGFNGTPTLVF--PNGRTQ 121 (147)
T ss_dssp HHHHHHHHHHCCCCTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC--TTSCEE
T ss_pred HHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHhCCCccCEEEE--ECCEEe
Confidence 113222221110 001112235778999999999999987 577753
No 482
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.70 E-value=3.5e-05 Score=60.97 Aligned_cols=65 Identities=17% Similarity=0.174 Sum_probs=42.9
Q ss_pred EEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCH--HHHHHHHhcCCCcccccCCchhHHHHH
Q 013684 240 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ--TSFESYFGTMPWLALPFGDPTIKELTK 317 (438)
Q Consensus 240 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~--~~~~~~~~~~~~~~~p~~~d~~~~l~~ 317 (438)
++.|+++|||+|+...+.|.++...+ ++ +..++++.+. ... ...+.+
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~-----------~~--~~~vdi~~~~~~~~~------------------~~~l~~ 62 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKE-----------GL--LEFVDITATSDTNEI------------------QDYLQQ 62 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCT-----------TS--EEEEEGGGSTTHHHH------------------HHHHHH
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCC-----------Cc--cEEEEccCCCCHHHH------------------HHHHHH
Confidence 56699999999999998887543221 12 4445555431 111 145777
Q ss_pred hcCcCceeeEEEECCCCcEEE
Q 013684 318 YFDVQGIPCLVIIGPEGKTVT 338 (438)
Q Consensus 318 ~~~v~~~P~~~lid~~G~i~~ 338 (438)
.+|+.++|+++ + +|+.+.
T Consensus 63 ~~g~~~vP~i~-~--~g~~i~ 80 (105)
T 1kte_A 63 LTGARTVPRVF-I--GKECIG 80 (105)
T ss_dssp HHSCCCSCEEE-E--TTEEEE
T ss_pred HhCCCCcCeEE-E--CCEEEe
Confidence 89999999974 4 677765
No 483
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.69 E-value=0.00027 Score=61.37 Aligned_cols=51 Identities=14% Similarity=0.238 Sum_probs=42.2
Q ss_pred EeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC
Q 013684 64 VKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD 115 (438)
Q Consensus 64 v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D 115 (438)
+.+....++++++.|+..+||+|+.+.|.+.++.+++.+.+ ++.+++..+.
T Consensus 20 ~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 70 (175)
T 1z6m_A 20 LHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSG-KVERIIKLFD 70 (175)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTT-SEEEEEEECC
T ss_pred cccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCC-cEEEEEEeCC
Confidence 55566678999999999999999999999999998885543 5888887763
No 484
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.68 E-value=0.00019 Score=62.49 Aligned_cols=34 Identities=21% Similarity=0.422 Sum_probs=29.4
Q ss_pred CCCEEEEEEecCCChhhhhhhHHHHHHHHHHHhh
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKLLSIYQKIKQN 268 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~ 268 (438)
.++++++.|+...||+|..+.+.+.++.+++.+.
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~ 53 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEG 53 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTT
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCc
Confidence 3678999999999999999999999888887653
No 485
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.67 E-value=0.00018 Score=63.34 Aligned_cols=30 Identities=23% Similarity=0.122 Sum_probs=28.3
Q ss_pred CCEEEEEEecCCChhhhhhhHHHHHHHHHH
Q 013684 236 GKTVGLYFSARWCIPCEKFMPKLLSIYQKI 265 (438)
Q Consensus 236 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~ 265 (438)
+++++|.|+..|||+|.++.|.+.++.+++
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh
Confidence 688999999999999999999999998887
No 486
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.64 E-value=7.1e-05 Score=66.25 Aligned_cols=43 Identities=21% Similarity=0.336 Sum_probs=33.2
Q ss_pred CCCEEEEEEecCCChhhhhhhHHH---HHHHHHHHhhhhhcCCCCCCEEEEEEecC
Q 013684 235 VGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEVVFVSTD 287 (438)
Q Consensus 235 ~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~vv~is~d 287 (438)
.++++++.||+.|||+|..+.|.+ .++.+++.+ +++++.+.+.
T Consensus 13 ~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~----------~v~~~~~~~~ 58 (189)
T 3l9v_A 13 VDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ----------GSRMVKYHVS 58 (189)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT----------TCCEEEEECS
T ss_pred CCCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC----------CCEEEEEech
Confidence 457899999999999999999986 456555543 4777777764
No 487
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.64 E-value=9.9e-05 Score=65.14 Aligned_cols=42 Identities=19% Similarity=0.299 Sum_probs=35.6
Q ss_pred CCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEec
Q 013684 70 EGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSS 114 (438)
Q Consensus 70 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~ 114 (438)
.++++++.|+..|||+|..+.|.+.++.+++.. ++.+..+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK---DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT---TEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC---ceEEEEeCc
Confidence 578899999999999999999999988887643 477777765
No 488
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.63 E-value=8e-05 Score=55.75 Aligned_cols=53 Identities=15% Similarity=0.283 Sum_probs=37.2
Q ss_pred EEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccc
Q 013684 75 ALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIP 154 (438)
Q Consensus 75 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P 154 (438)
++.|+++|||+|+...+.|.+ .+ +.+..+++|.+.+. .+..+.+++..+|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~-------~~--i~~~~vdi~~~~~~---------------------~~~~~~~g~~~vP 52 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMEN-------RG--FDFEMINVDRVPEA---------------------AEALRAQGFRQLP 52 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-------TT--CCCEEEETTTCHHH---------------------HHHHHHTTCCSSC
T ss_pred EEEEcCCCChhHHHHHHHHHH-------CC--CCeEEEECCCCHHH---------------------HHHHHHhCCCccC
Confidence 577999999999998887764 23 55666777755331 2222358999999
Q ss_pred eEE
Q 013684 155 CLV 157 (438)
Q Consensus 155 ~~~ 157 (438)
+++
T Consensus 53 ~~~ 55 (81)
T 1h75_A 53 VVI 55 (81)
T ss_dssp EEE
T ss_pred EEE
Confidence 984
No 489
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.59 E-value=3.6e-05 Score=62.17 Aligned_cols=65 Identities=11% Similarity=0.139 Sum_probs=43.5
Q ss_pred EEEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEE---EEEEecCCCHHHHHHHHhcCCCcccccCCchhHHH
Q 013684 239 VGLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFE---VVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKEL 315 (438)
Q Consensus 239 vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~---vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l 315 (438)
.++.|+++|||+|+...+.|.++ ++. +..|++|.+.+. ......+
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~----------------~~~~~~~~~vdi~~~~~~----------------~~~~~~l 67 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKF----------------SFKRGAYEIVDIKEFKPE----------------NELRDYF 67 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTS----------------CBCTTSEEEEEGGGSSSH----------------HHHHHHH
T ss_pred CEEEEEeCCChhHHHHHHHHHHc----------------CCCcCceEEEEccCCCCh----------------HHHHHHH
Confidence 46779999999999988877643 233 555666543200 0012467
Q ss_pred HHhcCcCceeeEEEECCCCcEEE
Q 013684 316 TKYFDVQGIPCLVIIGPEGKTVT 338 (438)
Q Consensus 316 ~~~~~v~~~P~~~lid~~G~i~~ 338 (438)
.+.+|+.++|+++ + +|+.+.
T Consensus 68 ~~~~g~~~vP~v~-i--~g~~ig 87 (114)
T 2hze_A 68 EQITGGKTVPRIF-F--GKTSIG 87 (114)
T ss_dssp HHHHSCCSSCEEE-E--TTEEEE
T ss_pred HHHhCCCCcCEEE-E--CCEEEe
Confidence 8889999999875 4 688765
No 490
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.55 E-value=0.0001 Score=58.29 Aligned_cols=61 Identities=15% Similarity=0.171 Sum_probs=39.4
Q ss_pred EEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccc
Q 013684 75 ALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIP 154 (438)
Q Consensus 75 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P 154 (438)
++.|+++|||+|+...+.|.++..++ .+ +..+++|.+.+ .......+.+.+++..+|
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~----~~--~~~vdi~~~~~-----------------~~~~~~~l~~~~g~~~vP 70 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKE----GL--LEFVDITATSD-----------------TNEIQDYLQQLTGARTVP 70 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCT----TS--EEEEEGGGSTT-----------------HHHHHHHHHHHHSCCCSC
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCC----Cc--cEEEEccCCCC-----------------HHHHHHHHHHHhCCCCcC
Confidence 66799999999999888876532221 11 44456554311 011225678889999999
Q ss_pred eEEE
Q 013684 155 CLVV 158 (438)
Q Consensus 155 ~~~l 158 (438)
++++
T Consensus 71 ~i~~ 74 (105)
T 1kte_A 71 RVFI 74 (105)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9743
No 491
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.47 E-value=0.00024 Score=58.75 Aligned_cols=61 Identities=18% Similarity=0.288 Sum_probs=42.1
Q ss_pred EEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCH--HHHHHHHhcCCCcccccCCchhHHHHHh
Q 013684 241 LYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQ--TSFESYFGTMPWLALPFGDPTIKELTKY 318 (438)
Q Consensus 241 l~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~--~~~~~~~~~~~~~~~p~~~d~~~~l~~~ 318 (438)
+.|+++|||+|+...+.|.++ ++.+..|.+|.+. ..+ ..++.+.
T Consensus 30 vvf~~~~Cp~C~~~~~~L~~~----------------~i~~~~vdid~~~~~~~~------------------~~~l~~~ 75 (130)
T 2cq9_A 30 VIFSKTSCSYCTMAKKLFHDM----------------NVNYKVVELDLLEYGNQF------------------QDALYKM 75 (130)
T ss_dssp EEEECSSCSHHHHHHHHHHHH----------------TCCCEEEETTTSTTHHHH------------------HHHHHHH
T ss_pred EEEEcCCChHHHHHHHHHHHc----------------CCCcEEEECcCCcCcHHH------------------HHHHHHH
Confidence 339999999999998887754 1334556666431 111 2457788
Q ss_pred cCcCceeeEEEECCCCcEEE
Q 013684 319 FDVQGIPCLVIIGPEGKTVT 338 (438)
Q Consensus 319 ~~v~~~P~~~lid~~G~i~~ 338 (438)
+++..+|+++ + +|+.+.
T Consensus 76 ~g~~~vP~l~-i--~G~~ig 92 (130)
T 2cq9_A 76 TGERTVPRIF-V--NGTFIG 92 (130)
T ss_dssp HSSCCSSEEE-E--TTEEEE
T ss_pred hCCCCcCEEE-E--CCEEEc
Confidence 9999999985 4 677765
No 492
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.47 E-value=0.0019 Score=56.36 Aligned_cols=130 Identities=12% Similarity=0.138 Sum_probs=76.4
Q ss_pred HhhhhcCCCCCccCCCCCceeecc----ccCCCEEEEEEecCCChhhhhhhHHH---HHHHHHHHhhhhhcCCCCCCEEE
Q 013684 209 INLLTNHDRGYLLGHPPDEKVPVS----SLVGKTVGLYFSARWCIPCEKFMPKL---LSIYQKIKQNLVEKGDALEDFEV 281 (438)
Q Consensus 209 ~~~~g~~~~~f~l~~~g~~~~~l~----~~~gk~vll~F~a~wC~~C~~~~p~l---~~l~~~~~~~~~~~~~~~~~~~v 281 (438)
....|...|.|--..-.+ .+..+ .-.+|.++|++.++||+.|..+...+ .++.+-++. ++.+
T Consensus 25 ~~~yg~~~p~F~~gs~~~-Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~----------nfV~ 93 (178)
T 2ec4_A 25 SSRYGDCHPVFFIGSLEA-AFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ----------NFIT 93 (178)
T ss_dssp HHHHCSCCCCCCCSCHHH-HHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH----------TEEE
T ss_pred HHHhCCCCCCeeeCCHHH-HHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc----------CEEE
Confidence 334566778876322222 34445 55789999999999999998876433 234444443 4666
Q ss_pred EEEecCCCHH--HHHHHHhc-CCCcccccCCchhHHHH---HhcCcCceeeEEEECCCC---cEEEcccchhhhhccccC
Q 013684 282 VFVSTDRDQT--SFESYFGT-MPWLALPFGDPTIKELT---KYFDVQGIPCLVIIGPEG---KTVTKQGRNLINLYQENA 352 (438)
Q Consensus 282 v~is~d~~~~--~~~~~~~~-~~~~~~p~~~d~~~~l~---~~~~v~~~P~~~lid~~G---~i~~~~~~~~~~~~g~~~ 352 (438)
.+.+++.++. .+..++.. .+ ..++ +.|++.++|++++|++.| +++.+ ..|.
T Consensus 94 w~~dv~~~e~~~~~~~~~~~~~g-----------~~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~-------~~G~-- 153 (178)
T 2ec4_A 94 WAWDLTKDSNRARFLTMCNRHFG-----------SVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNV-------IQGN-- 153 (178)
T ss_dssp EEEECCSHHHHHHHHHHHHHHTC-----------HHHHHHHHHSCSTTCSEEEEECCCSSCCCEEEE-------ECSC--
T ss_pred EEEeCCCchhhhhhhhhhhhhhH-----------HHHHHHHhhcCCCCCCeEEEEEcCCCceEEEEE-------EeCC--
Confidence 6666664321 11122211 11 2333 448999999999998764 56665 3442
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 013684 353 YPFTEAKLEFLEKQMEEE 370 (438)
Q Consensus 353 ~~~~~~~~~~L~~~i~~~ 370 (438)
...++.++.|...+++.
T Consensus 154 -~~~~~ll~~L~~~~e~~ 170 (178)
T 2ec4_A 154 -TTVDELMMRLMAAMEIF 170 (178)
T ss_dssp -CCHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHh
Confidence 22445555566666543
No 493
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.46 E-value=6.6e-05 Score=60.61 Aligned_cols=60 Identities=17% Similarity=0.161 Sum_probs=40.5
Q ss_pred EEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEE---EEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcC
Q 013684 73 VTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFE---VVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFD 149 (438)
Q Consensus 73 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~---iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~ 149 (438)
..++.|+++|||+|+...+.|.+ .+ +. +..+++|.+.+ .......+.+.++
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~-------~~--~~~~~~~~vdi~~~~~-----------------~~~~~~~l~~~~g 72 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNK-------FS--FKRGAYEIVDIKEFKP-----------------ENELRDYFEQITG 72 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTT-------SC--BCTTSEEEEEGGGSSS-----------------HHHHHHHHHHHHS
T ss_pred CCEEEEEeCCChhHHHHHHHHHH-------cC--CCcCceEEEEccCCCC-----------------hHHHHHHHHHHhC
Confidence 34677999999999998887654 22 33 55566664421 1122257888899
Q ss_pred cCccceEEE
Q 013684 150 IEGIPCLVV 158 (438)
Q Consensus 150 v~~~P~~~l 158 (438)
+..+|++++
T Consensus 73 ~~~vP~v~i 81 (114)
T 2hze_A 73 GKTVPRIFF 81 (114)
T ss_dssp CCSSCEEEE
T ss_pred CCCcCEEEE
Confidence 999998754
No 494
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=97.46 E-value=0.00046 Score=60.84 Aligned_cols=102 Identities=16% Similarity=0.238 Sum_probs=75.7
Q ss_pred eeecccc--CCCEEEEEEe-cCCChhhhh-hhHHHHHHHHHH-HhhhhhcCCCCCCE-EEEEEecCCCHHHHHHHHhcCC
Q 013684 228 KVPVSSL--VGKTVGLYFS-ARWCIPCEK-FMPKLLSIYQKI-KQNLVEKGDALEDF-EVVFVSTDRDQTSFESYFGTMP 301 (438)
Q Consensus 228 ~~~l~~~--~gk~vll~F~-a~wC~~C~~-~~p~l~~l~~~~-~~~~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~ 301 (438)
++++++. +||.|+|+++ +-+.|.|-. .+|.+.+.++++ +.+ ++ +|+.|++| +.-.+++|.+.++
T Consensus 59 ~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~~~d~~~k~k---------Gvd~I~ciSVN-D~FVm~AW~k~~~ 128 (199)
T 4h86_A 59 TVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEK---------EVDQVIVVTVD-NPFANQAWAKSLG 128 (199)
T ss_dssp EEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHHHHHHHHHHS---------CCCEEEEEESS-CHHHHHHHHHHTT
T ss_pred eeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHHHHHHHHHhc---------CCcEEEEEEcC-CHHHHHHHHHHhc
Confidence 5777664 6898888777 568999976 799998888775 544 44 69999998 5566666665543
Q ss_pred ---CcccccCCchhHHHHHhcCcC---------ceeeEEEECCCCcEEEcc
Q 013684 302 ---WLALPFGDPTIKELTKYFDVQ---------GIPCLVIIGPEGKTVTKQ 340 (438)
Q Consensus 302 ---~~~~p~~~d~~~~l~~~~~v~---------~~P~~~lid~~G~i~~~~ 340 (438)
-..++++.|.+.++.+.+|+. .....+||| ||+|.+..
T Consensus 129 ~~~~~~i~~laD~~~eftkalGl~~~~~~gg~RS~Rya~IVd-DGvV~~~~ 178 (199)
T 4h86_A 129 VKDTTHIKFASDPGCAFTKSIGFELAVGDGVYWSGRWAMVVE-NGIVTYAA 178 (199)
T ss_dssp CCCCSSEEEEECGGGHHHHHTTCEEEEETTEEEECSEEEEEE-TTEEEEEE
T ss_pred ccccccccccCCcchHHHHhcCceeecCCCcceeeEEEEEEE-CCEEEEEE
Confidence 346888899999999999973 233467886 99988764
No 495
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.41 E-value=0.00088 Score=51.77 Aligned_cols=62 Identities=18% Similarity=0.328 Sum_probs=42.2
Q ss_pred EEEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCCHHHHHHHHhcCCCcccccCCchhHHHHHh-
Q 013684 240 GLYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRDQTSFESYFGTMPWLALPFGDPTIKELTKY- 318 (438)
Q Consensus 240 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~p~~~d~~~~l~~~- 318 (438)
++.|+.+|||+|.+....|.+ + ++.+..++++.+.+..+ .+.+.
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~-------~---------gi~y~~idi~~d~~~~~-------------------~~~~~~ 50 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTA-------N---------RIAYDEVDIEHNRAAAE-------------------FVGSVN 50 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHH-------T---------TCCCEEEETTTCHHHHH-------------------HHHHHS
T ss_pred EEEEcCCCCHhHHHHHHHHHh-------c---------CCceEEEEcCCCHHHHH-------------------HHHHHc
Confidence 556889999999987766543 2 56777888887754332 22332
Q ss_pred cCcCceeeEEEECCCCcEEE
Q 013684 319 FDVQGIPCLVIIGPEGKTVT 338 (438)
Q Consensus 319 ~~v~~~P~~~lid~~G~i~~ 338 (438)
.|.+.+|++++ .||.++.
T Consensus 51 ~G~~tVP~I~i--~Dg~~l~ 68 (92)
T 2lqo_A 51 GGNRTVPTVKF--ADGSTLT 68 (92)
T ss_dssp SSSSCSCEEEE--TTSCEEE
T ss_pred CCCCEeCEEEE--eCCEEEe
Confidence 37889998664 5777764
No 496
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.37 E-value=0.00019 Score=59.34 Aligned_cols=56 Identities=18% Similarity=0.140 Sum_probs=37.6
Q ss_pred EEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccceE
Q 013684 77 YFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIPCL 156 (438)
Q Consensus 77 ~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P~~ 156 (438)
.|+++|||+|+...+.|.++ + +.+..+++|.+.+ .......+.+.+++..+|++
T Consensus 31 vf~~~~Cp~C~~~~~~L~~~-------~--i~~~~vdid~~~~-----------------~~~~~~~l~~~~g~~~vP~l 84 (130)
T 2cq9_A 31 IFSKTSCSYCTMAKKLFHDM-------N--VNYKVVELDLLEY-----------------GNQFQDALYKMTGERTVPRI 84 (130)
T ss_dssp EEECSSCSHHHHHHHHHHHH-------T--CCCEEEETTTSTT-----------------HHHHHHHHHHHHSSCCSSEE
T ss_pred EEEcCCChHHHHHHHHHHHc-------C--CCcEEEECcCCcC-----------------cHHHHHHHHHHhCCCCcCEE
Confidence 39999999999998887764 2 2334455554311 11222568888999999998
Q ss_pred EE
Q 013684 157 VV 158 (438)
Q Consensus 157 ~l 158 (438)
++
T Consensus 85 ~i 86 (130)
T 2cq9_A 85 FV 86 (130)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 497
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.37 E-value=0.00041 Score=58.66 Aligned_cols=61 Identities=18% Similarity=0.253 Sum_probs=41.4
Q ss_pred EEEecCCChhhhhhhHHHHHHHHHHHhhhhhcCCCCCCEEEEEEecCCC--HHHHHHHHhcCCCcccccCCchhHHHHHh
Q 013684 241 LYFSARWCIPCEKFMPKLLSIYQKIKQNLVEKGDALEDFEVVFVSTDRD--QTSFESYFGTMPWLALPFGDPTIKELTKY 318 (438)
Q Consensus 241 l~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~~~~~vv~is~d~~--~~~~~~~~~~~~~~~~p~~~d~~~~l~~~ 318 (438)
+.|+++|||+|+...+.|.++. +.+..+.+|.+ ...+ ..++.+.
T Consensus 52 vvf~~~~Cp~C~~~k~~L~~~~----------------i~~~~vdId~~~~~~~~------------------~~~L~~~ 97 (146)
T 2ht9_A 52 VIFSKTSCSYCTMAKKLFHDMN----------------VNYKVVELDLLEYGNQF------------------QDALYKM 97 (146)
T ss_dssp EEEECTTCHHHHHHHHHHHHHT----------------CCCEEEEGGGCTTHHHH------------------HHHHHHH
T ss_pred EEEECCCChhHHHHHHHHHHcC----------------CCeEEEECccCcCCHHH------------------HHHHHHH
Confidence 3399999999999988877541 23444555533 1111 2457888
Q ss_pred cCcCceeeEEEECCCCcEEE
Q 013684 319 FDVQGIPCLVIIGPEGKTVT 338 (438)
Q Consensus 319 ~~v~~~P~~~lid~~G~i~~ 338 (438)
+|+.++|+++ + +|+.+.
T Consensus 98 ~g~~tvP~if-i--~G~~ig 114 (146)
T 2ht9_A 98 TGERTVPRIF-V--NGTFIG 114 (146)
T ss_dssp HSCCCSCEEE-E--TTEEEE
T ss_pred hCCCCcCeEE-E--CCEEEe
Confidence 9999999985 4 687764
No 498
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.34 E-value=0.00064 Score=57.48 Aligned_cols=87 Identities=20% Similarity=0.276 Sum_probs=54.0
Q ss_pred EeccccCCCEEEEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecC-----CC-------------H-HHHHHh
Q 013684 64 VKVSDLEGKVTALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSD-----ED-------------L-NAFNNY 124 (438)
Q Consensus 64 v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D-----~~-------------~-~~~~~~ 124 (438)
+.+..-.++++++.|+.++||+|+++.+.|.++ + ++.++++.+- .+ + ..|...
T Consensus 7 i~~~~~~a~~~vv~f~D~~Cp~C~~~~~~l~~l-------~-~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~ 78 (147)
T 3gv1_A 7 IKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEKM-------T-DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDW 78 (147)
T ss_dssp EEEEETTCCEEEEEEECTTCHHHHHHHHHHTTC-------C-SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHH
T ss_pred eeeecCCCCEEEEEEECCCChhHHHHHHHHhhc-------C-ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHH
Confidence 344444679999999999999999999987653 2 3667666431 11 1 112222
Q ss_pred HhcCCcc---cccCCChHHHHHHhhhcCcCccceEEE
Q 013684 125 RACMPWL---AVPYSDLETKKALNRKFDIEGIPCLVV 158 (438)
Q Consensus 125 ~~~~~~~---~~~~~d~~~~~~l~~~~~v~~~P~~~l 158 (438)
+..-... .-.-...+....+++.+||+++|++++
T Consensus 79 ~~~g~~~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi 115 (147)
T 3gv1_A 79 MRKGKFPVGGSICDNPVAETTSLGEQFGFNGTPTLVF 115 (147)
T ss_dssp HHHCCCCTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC
T ss_pred HhCCCCCCccHHHHHHHHHHHHHHHHhCCCccCEEEE
Confidence 2211110 001112345678999999999999998
No 499
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.33 E-value=0.00028 Score=51.65 Aligned_cols=53 Identities=11% Similarity=0.103 Sum_probs=37.0
Q ss_pred EEEEeccCCccchhhHHHHHHHHHHHhcCCCCEEEEEEecCCCHHHHHHhHhcCCcccccCCChHHHHHHhhhcCcCccc
Q 013684 75 ALYFSANWYPPCGNFTGVLVDVYEELRNNGSDFEVVFVSSDEDLNAFNNYRACMPWLAVPYSDLETKKALNRKFDIEGIP 154 (438)
Q Consensus 75 ll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~iv~vs~D~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~v~~~P 154 (438)
++.|+++||++|+...+.|.++ + +.+..++++.+.+ ....+ +.+++..+|
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~--i~~~~~di~~~~~--------------------~~~~~-~~~~~~~vP 52 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------G--LAYNTVDISLDDE--------------------ARDYV-MALGYVQAP 52 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------T--CCCEEEETTTCHH--------------------HHHHH-HHTTCBCCC
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------C--CCcEEEECCCCHH--------------------HHHHH-HHcCCCccC
Confidence 5679999999999988877653 3 4555566665432 11223 468999999
Q ss_pred eEE
Q 013684 155 CLV 157 (438)
Q Consensus 155 ~~~ 157 (438)
+++
T Consensus 53 ~l~ 55 (75)
T 1r7h_A 53 VVE 55 (75)
T ss_dssp EEE
T ss_pred EEE
Confidence 987
No 500
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.32 E-value=0.0012 Score=52.06 Aligned_cols=23 Identities=17% Similarity=0.340 Sum_probs=18.9
Q ss_pred EEEEEecCCChhhhhhhHHHHHH
Q 013684 239 VGLYFSARWCIPCEKFMPKLLSI 261 (438)
Q Consensus 239 vll~F~a~wC~~C~~~~p~l~~l 261 (438)
.++.|+++|||+|++..+.|.++
T Consensus 23 ~v~ly~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 23 KVIMYGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHH
T ss_pred eEEEEcCCCCchHHHHHHHHHHc
Confidence 45568999999999999887753
Done!