Query 013692
Match_columns 438
No_of_seqs 92 out of 94
Neff 3.3
Searched_HMMs 13730
Date Mon Mar 25 15:19:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013692.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013692hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ifxa1 d.58.4.19 (A:1-108) Hy 10.1 60 0.0043 25.5 2.0 56 320-381 33-91 (108)
2 d1iyca_ g.31.1.2 (A:) Antifung 9.0 49 0.0036 21.6 0.9 12 44-55 10-21 (36)
3 d2b0ca1 c.108.1.2 (A:8-204) Pu 7.1 67 0.0049 23.5 1.0 10 27-36 1-10 (197)
4 d1e5ka_ c.68.1.8 (A:) Molybden 6.8 71 0.0052 24.5 1.1 12 355-366 176-187 (188)
5 d1ltqa1 c.108.1.9 (A:153-301) 6.7 3.4E+02 0.025 19.4 5.2 16 22-37 2-18 (149)
6 d2pcsa1 d.129.3.10 (A:1-147) H 6.3 32 0.0024 25.4 -1.3 15 312-326 22-36 (147)
7 d1dp3a_ a.55.1.2 (A:) DNA-bind 6.0 1.1E+02 0.0077 21.9 1.6 18 402-419 11-28 (55)
8 d1ppjw_ f.23.14.1 (W:) Subunit 4.6 1E+02 0.0073 22.4 0.6 11 2-12 6-16 (62)
9 d1okha_ g.13.1.1 (A:) Viscotox 4.5 94 0.0069 21.5 0.4 9 1-9 8-16 (46)
10 d2b0ha1 a.24.9.2 (A:1838-1973) 4.4 2.2E+02 0.016 21.8 2.6 19 65-83 118-136 (136)
No 1
>d2ifxa1 d.58.4.19 (A:1-108) Hypothetical protein Reut_A1503 {Ralstonia eutropha [TaxId: 106590]}
Probab=10.06 E-value=60 Score=25.51 Aligned_cols=56 Identities=27% Similarity=0.447 Sum_probs=34.9
Q ss_pred cCChhhhhhccc---CCCcccccccccCCCCCCCCccccccccHHHHHHHhHhhhhcchhhHhhc
Q 013692 320 YPGYQEYNREIV---DSDDEDDLSKMDMGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFG 381 (438)
Q Consensus 320 YPG~~e~~~~i~---DSDDE~DySKMD~Gn~~KGpl~RWDFdTeEEy~~Ym~~kEalPKAAfQyG 381 (438)
-||+.-|.--.| --|--|- -.|.|. --.||--=|.+++.|..||++-. -||=|.-|
T Consensus 33 ~pglhkyevrlva~~ptdthvp--~~dig~--vdaigecwf~~e~~y~~ym~sdi--rkawfehg 91 (108)
T d2ifxa1 33 VPGLHKYEVRLVAEQPTDTHVP--FFDIGH--VDAIGECWFKDDAAYATYMASDI--RKAWFEHG 91 (108)
T ss_dssp CTTCCEEEEEEEEECC---CCC--BCCCCC--CCEEEEEEESSHHHHHHHHHCHH--HHHHHHHH
T ss_pred CCcceeeeEEEecCCCCCCCCc--cccccc--cchhhhhhhccHHHHHHHHHHHH--HHHHHHhc
Confidence 488876653322 2233332 346664 34555555999999999999865 68888765
No 2
>d1iyca_ g.31.1.2 (A:) Antifungal peptide scarabaecin {Beetle (Oryctes rhinoceros) [TaxId: 72550]}
Probab=8.98 E-value=49 Score=21.57 Aligned_cols=12 Identities=42% Similarity=0.847 Sum_probs=10.6
Q ss_pred cccccccCCCCC
Q 013692 44 TLHRSKADCPVP 55 (438)
Q Consensus 44 TliRSKaDcP~~ 55 (438)
.||||.+.||.-
T Consensus 10 vlirsrsncpkg 21 (36)
T d1iyca_ 10 VLIRSRSNCPKG 21 (36)
T ss_dssp CCCTTTSCCCSS
T ss_pred EEEeeccCCCCc
Confidence 589999999974
No 3
>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}
Probab=7.10 E-value=67 Score=23.48 Aligned_cols=10 Identities=30% Similarity=0.517 Sum_probs=8.9
Q ss_pred eEEEEeCCCC
Q 013692 27 MSFIFNTEGG 36 (438)
Q Consensus 27 MAYVfDLdde 36 (438)
|-|+|||+.-
T Consensus 1 ~l~iFDlDgt 10 (197)
T d2b0ca1 1 MLYIFDLGNV 10 (197)
T ss_dssp CEEEECCBTT
T ss_pred CEEEEeCCCC
Confidence 7899999985
No 4
>d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]}
Probab=6.84 E-value=71 Score=24.47 Aligned_cols=12 Identities=33% Similarity=0.429 Sum_probs=10.8
Q ss_pred cccccHHHHHHH
Q 013692 355 WDFETEEEWATY 366 (438)
Q Consensus 355 WDFdTeEEy~~Y 366 (438)
.|.+|.|+|++|
T Consensus 176 ~ninTpeDl~r~ 187 (188)
T d1e5ka_ 176 VNVNTPEELARW 187 (188)
T ss_dssp CCCCSHHHHHTT
T ss_pred cCCCCHHHHHhh
Confidence 599999999987
No 5
>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=6.74 E-value=3.4e+02 Score=19.43 Aligned_cols=16 Identities=31% Similarity=0.638 Sum_probs=12.3
Q ss_pred ccCCce-EEEEeCCCCC
Q 013692 22 FLPGRM-SFIFNTEGGY 37 (438)
Q Consensus 22 FlPGRM-AYVfDLdde~ 37 (438)
+-||+. |.+||||.-.
T Consensus 2 ~~~~kpk~vifDiDgTL 18 (149)
T d1ltqa1 2 GTPGKPKAVIFDVDGTL 18 (149)
T ss_dssp CCTTSCEEEEEETBTTT
T ss_pred CCCCCCcEEEEEcCCCc
Confidence 457775 8999999853
No 6
>d2pcsa1 d.129.3.10 (A:1-147) Hypothetical protein GKP20 {Geobacillus kaustophilus [TaxId: 1462]}
Probab=6.27 E-value=32 Score=25.39 Aligned_cols=15 Identities=20% Similarity=0.326 Sum_probs=12.3
Q ss_pred CCCccccccCChhhh
Q 013692 312 ISESYSECYPGYQEY 326 (438)
Q Consensus 312 ~sesYAECYPG~~e~ 326 (438)
..+.|++|-||...+
T Consensus 22 D~~~~~~~~Pg~~~~ 36 (147)
T d2pcsa1 22 DPSILSKCIMGCKSL 36 (147)
T ss_dssp CHHHHHHHSTTEEEE
T ss_pred CHHHHHhhCcchhhc
Confidence 368999999999643
No 7
>d1dp3a_ a.55.1.2 (A:) DNA-binding domain (fragment?) of the TraM protein {Escherichia coli [TaxId: 562]}
Probab=6.04 E-value=1.1e+02 Score=21.88 Aligned_cols=18 Identities=39% Similarity=0.530 Sum_probs=14.8
Q ss_pred HHHHHHHHHHhhhcccCC
Q 013692 402 ELHKINKILARKKMEKDT 419 (438)
Q Consensus 402 e~~kI~~Il~krk~~~~~ 419 (438)
=..||++|+++|+.++..
T Consensus 11 v~ekIn~ive~rr~eGa~ 28 (55)
T d1dp3a_ 11 IVYKINKIVERRRAEGAK 28 (55)
T ss_dssp HHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCC
Confidence 457999999999987654
No 8
>d1ppjw_ f.23.14.1 (W:) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Cow (Bos taurus) [TaxId: 9913]}
Probab=4.56 E-value=1e+02 Score=22.38 Aligned_cols=11 Identities=9% Similarity=0.419 Sum_probs=6.7
Q ss_pred hhhHHHHHhcC
Q 013692 2 AKSVYQWIVKP 12 (438)
Q Consensus 2 aRnIy~~lfk~ 12 (438)
+..||++|||.
T Consensus 6 ~~~lYn~lfrR 16 (62)
T d1ppjw_ 6 TARLYSLLFRR 16 (62)
T ss_dssp HHHHHHHHTSS
T ss_pred HHHHHHHHHHh
Confidence 45667776643
No 9
>d1okha_ g.13.1.1 (A:) Viscotoxin a3 {European mistletoe (Viscum album) [TaxId: 3972]}
Probab=4.47 E-value=94 Score=21.49 Aligned_cols=9 Identities=11% Similarity=0.386 Sum_probs=5.6
Q ss_pred ChhhHHHHH
Q 013692 1 MAKSVYQWI 9 (438)
Q Consensus 1 laRnIy~~l 9 (438)
+|||+|+.-
T Consensus 8 ~aRN~YN~C 16 (46)
T d1okha_ 8 TGRNIYNAC 16 (46)
T ss_dssp HHHHHHHHH
T ss_pred hhhhhhhhh
Confidence 367777654
No 10
>d2b0ha1 a.24.9.2 (A:1838-1973) Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=4.36 E-value=2.2e+02 Score=21.82 Aligned_cols=19 Identities=16% Similarity=0.461 Sum_probs=16.5
Q ss_pred hHHHHHHHHHHHHHhcCCC
Q 013692 65 GSVLDRIAKIMTYLRLGSS 83 (438)
Q Consensus 65 diVI~KLaqImSYLR~G~~ 83 (438)
..|.+.|.++|.-|+.|+|
T Consensus 118 r~V~esv~~Ll~alq~gsr 136 (136)
T d2b0ha1 118 RRVSEKVSHVLAALQAGNR 136 (136)
T ss_dssp HHHHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHHhhcC
Confidence 4688999999999999985
Done!