Query 013696
Match_columns 438
No_of_seqs 460 out of 2741
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 15:23:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013696.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013696hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.8 1.4E-20 4.8E-25 158.5 13.4 120 74-195 5-125 (126)
2 4ga2_A E3 SUMO-protein ligase 99.8 4.1E-20 1.4E-24 160.3 10.9 138 54-193 2-142 (150)
3 2pl2_A Hypothetical conserved 99.8 1.6E-19 5.6E-24 166.0 13.2 172 11-194 10-194 (217)
4 3vtx_A MAMA; tetratricopeptide 99.8 4.4E-19 1.5E-23 157.4 14.0 154 53-208 9-174 (184)
5 4gyw_A UDP-N-acetylglucosamine 99.8 1.4E-19 4.9E-24 195.1 10.3 157 47-205 7-175 (723)
6 3vtx_A MAMA; tetratricopeptide 99.8 6.9E-19 2.4E-23 156.2 12.7 165 11-186 10-176 (184)
7 2pl2_A Hypothetical conserved 99.8 1.3E-18 4.6E-23 159.9 14.9 151 56-209 12-185 (217)
8 3gyz_A Chaperone protein IPGC; 99.8 4.4E-18 1.5E-22 148.1 13.8 115 69-185 23-138 (151)
9 2h6f_A Protein farnesyltransfe 99.8 7.5E-18 2.6E-22 168.8 15.7 135 60-196 109-245 (382)
10 2vgx_A Chaperone SYCD; alterna 99.8 5.6E-18 1.9E-22 146.5 12.5 131 67-199 6-137 (148)
11 4i17_A Hypothetical protein; T 99.8 3.8E-18 1.3E-22 156.8 11.8 171 12-192 13-221 (228)
12 4i17_A Hypothetical protein; T 99.7 1.7E-17 5.7E-22 152.5 15.3 134 54-189 12-157 (228)
13 2hr2_A Hypothetical protein; a 99.7 6.2E-18 2.1E-22 147.2 10.6 117 83-199 10-150 (159)
14 2h6f_A Protein farnesyltransfe 99.7 3.3E-18 1.1E-22 171.4 9.4 174 12-196 103-285 (382)
15 4gyw_A UDP-N-acetylglucosamine 99.7 5.6E-18 1.9E-22 182.7 9.8 164 10-184 13-178 (723)
16 4gcn_A Protein STI-1; structur 99.7 6.4E-17 2.2E-21 136.0 14.0 108 84-192 8-123 (127)
17 3rkv_A Putative peptidylprolyl 99.7 8.4E-17 2.9E-21 140.3 15.3 118 82-199 9-146 (162)
18 2xcb_A PCRH, regulatory protei 99.7 3.7E-17 1.3E-21 139.7 12.3 129 69-199 5-134 (142)
19 3upv_A Heat shock protein STI1 99.7 1.8E-16 6.1E-21 131.9 15.0 113 84-196 4-123 (126)
20 1w3b_A UDP-N-acetylglucosamine 99.7 7.3E-17 2.5E-21 160.0 13.4 186 11-207 106-303 (388)
21 3uq3_A Heat shock protein STI1 99.7 7.2E-17 2.5E-21 149.2 12.1 186 10-205 9-237 (258)
22 1w3b_A UDP-N-acetylglucosamine 99.7 1.2E-16 4E-21 158.5 14.1 187 10-207 139-337 (388)
23 4abn_A Tetratricopeptide repea 99.7 6.7E-17 2.3E-21 166.4 12.1 169 18-198 114-305 (474)
24 4abn_A Tetratricopeptide repea 99.7 6.6E-17 2.3E-21 166.4 11.8 156 52-209 105-292 (474)
25 4eqf_A PEX5-related protein; a 99.7 2.1E-16 7.1E-21 155.2 14.4 184 11-205 70-311 (365)
26 3urz_A Uncharacterized protein 99.7 2.4E-16 8.3E-21 143.7 13.8 147 60-208 16-190 (208)
27 2q7f_A YRRB protein; TPR, prot 99.7 1.2E-16 4.2E-21 146.7 10.6 182 15-207 32-225 (243)
28 1p5q_A FKBP52, FK506-binding p 99.7 1.5E-16 5.3E-21 156.3 11.6 136 60-197 125-276 (336)
29 2ho1_A Type 4 fimbrial biogene 99.7 4.5E-16 1.5E-20 144.3 13.4 184 13-207 44-241 (252)
30 3uq3_A Heat shock protein STI1 99.7 2.1E-16 7.2E-21 146.1 11.1 179 12-194 44-256 (258)
31 3qky_A Outer membrane assembly 99.7 1E-15 3.5E-20 143.7 15.9 152 55-208 21-228 (261)
32 3sz7_A HSC70 cochaperone (SGT) 99.7 1.7E-15 5.7E-20 132.2 16.0 106 82-187 9-115 (164)
33 4eqf_A PEX5-related protein; a 99.7 3.3E-16 1.1E-20 153.7 12.9 173 12-184 139-314 (365)
34 2e2e_A Formate-dependent nitri 99.7 1.3E-15 4.3E-20 134.4 15.1 127 59-187 21-151 (177)
35 3qky_A Outer membrane assembly 99.7 5.4E-16 1.9E-20 145.7 13.0 171 13-189 22-233 (261)
36 2vq2_A PILW, putative fimbrial 99.7 1E-15 3.4E-20 138.4 14.3 167 11-188 13-185 (225)
37 2fbn_A 70 kDa peptidylprolyl i 99.7 7.1E-16 2.4E-20 138.9 13.0 139 60-200 16-171 (198)
38 2q7f_A YRRB protein; TPR, prot 99.7 1.9E-15 6.5E-20 138.7 16.1 153 51-205 25-189 (243)
39 1fch_A Peroxisomal targeting s 99.7 1.2E-15 4.3E-20 149.1 15.3 184 11-205 69-315 (368)
40 3as5_A MAMA; tetratricopeptide 99.6 4.1E-15 1.4E-19 129.8 17.0 144 60-205 20-174 (186)
41 3ieg_A DNAJ homolog subfamily 99.6 2.2E-15 7.4E-20 145.8 15.9 139 60-198 200-353 (359)
42 3hym_B Cell division cycle pro 99.6 8.6E-16 2.9E-20 147.3 12.9 185 12-207 96-302 (330)
43 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 2.6E-16 8.9E-21 161.3 9.6 138 60-199 246-399 (457)
44 4gco_A Protein STI-1; structur 99.6 4.4E-16 1.5E-20 130.8 9.3 107 53-161 17-125 (126)
45 3hym_B Cell division cycle pro 99.6 1.8E-15 6E-20 145.1 14.6 180 14-204 30-222 (330)
46 3ieg_A DNAJ homolog subfamily 99.6 1.9E-15 6.6E-20 146.1 14.7 184 11-205 8-218 (359)
47 2pzi_A Probable serine/threoni 99.6 1.4E-16 4.9E-21 171.1 7.1 173 19-195 404-578 (681)
48 4ga2_A E3 SUMO-protein ligase 99.6 1.6E-16 5.4E-21 137.5 6.0 144 12-166 3-149 (150)
49 3u4t_A TPR repeat-containing p 99.6 4.2E-15 1.4E-19 139.1 16.0 146 60-207 15-174 (272)
50 1fch_A Peroxisomal targeting s 99.6 4.1E-15 1.4E-19 145.4 15.7 186 12-197 138-342 (368)
51 3u4t_A TPR repeat-containing p 99.6 6E-15 2.1E-19 138.1 15.9 174 11-194 8-185 (272)
52 1xnf_A Lipoprotein NLPI; TPR, 99.6 1E-14 3.6E-19 136.3 17.3 144 60-203 17-172 (275)
53 2vsy_A XCC0866; transferase, g 99.6 4.5E-15 1.5E-19 155.6 16.4 145 61-207 2-160 (568)
54 3q49_B STIP1 homology and U bo 99.6 1.2E-14 4E-19 121.9 15.3 117 78-196 5-127 (137)
55 2vq2_A PILW, putative fimbrial 99.6 1.4E-14 4.8E-19 130.9 16.9 148 56-205 15-177 (225)
56 2ho1_A Type 4 fimbrial biogene 99.6 1.8E-14 6.1E-19 133.4 17.5 149 54-204 42-204 (252)
57 1xnf_A Lipoprotein NLPI; TPR, 99.6 4.8E-15 1.7E-19 138.6 13.7 156 20-183 19-176 (275)
58 3as5_A MAMA; tetratricopeptide 99.6 2.1E-15 7.2E-20 131.7 10.3 163 12-185 14-178 (186)
59 2pzi_A Probable serine/threoni 99.6 1.3E-15 4.6E-20 163.6 10.7 144 59-205 402-564 (681)
60 1hh8_A P67PHOX, NCF-2, neutrop 99.6 6.6E-15 2.3E-19 133.1 13.5 131 60-197 18-165 (213)
61 1qqe_A Vesicular transport pro 99.6 2.3E-16 7.7E-21 151.6 3.2 172 13-187 44-235 (292)
62 3cv0_A Peroxisome targeting si 99.6 2.7E-14 9.1E-19 136.6 17.7 182 12-195 95-296 (327)
63 3fp2_A TPR repeat-containing p 99.6 3.5E-15 1.2E-19 153.5 12.2 184 13-208 250-461 (537)
64 2y4t_A DNAJ homolog subfamily 99.6 9.1E-15 3.1E-19 147.1 15.0 185 13-208 150-362 (450)
65 3mkr_A Coatomer subunit epsilo 99.6 8E-15 2.8E-19 141.1 13.9 163 11-187 70-236 (291)
66 1hxi_A PEX5, peroxisome target 99.6 6.8E-15 2.3E-19 122.5 11.5 100 87-186 20-120 (121)
67 2y4t_A DNAJ homolog subfamily 99.6 8.5E-15 2.9E-19 147.3 13.4 184 12-206 32-242 (450)
68 1elw_A TPR1-domain of HOP; HOP 99.6 8.4E-14 2.9E-18 112.3 16.5 112 84-195 4-116 (118)
69 2xpi_A Anaphase-promoting comp 99.6 1.3E-14 4.5E-19 151.5 14.7 151 55-207 413-582 (597)
70 3cv0_A Peroxisome targeting si 99.6 5.7E-15 1.9E-19 141.3 11.0 112 94-205 148-270 (327)
71 2yhc_A BAMD, UPF0169 lipoprote 99.6 2.3E-14 7.7E-19 132.0 14.3 128 60-187 16-183 (225)
72 3mkr_A Coatomer subunit epsilo 99.6 2.6E-14 9E-19 137.4 15.1 150 53-203 134-286 (291)
73 2dba_A Smooth muscle cell asso 99.6 8.4E-14 2.9E-18 117.6 16.3 116 77-194 23-142 (148)
74 3urz_A Uncharacterized protein 99.6 4.5E-14 1.5E-18 128.6 15.0 109 87-195 7-132 (208)
75 1a17_A Serine/threonine protei 99.6 1.5E-13 5.3E-18 118.3 17.7 111 84-194 13-124 (166)
76 2fo7_A Synthetic consensus TPR 99.6 6E-14 2E-18 115.4 14.2 123 60-184 13-136 (136)
77 2lni_A Stress-induced-phosphop 99.6 5.6E-14 1.9E-18 116.3 13.7 113 84-196 16-129 (133)
78 2yhc_A BAMD, UPF0169 lipoprote 99.6 2.7E-14 9.3E-19 131.5 13.0 167 13-185 11-218 (225)
79 3fp2_A TPR repeat-containing p 99.6 6.1E-15 2.1E-19 151.7 9.5 188 13-205 209-408 (537)
80 2xpi_A Anaphase-promoting comp 99.5 3.5E-14 1.2E-18 148.3 14.5 172 12-194 413-593 (597)
81 1qqe_A Vesicular transport pro 99.5 1.4E-14 4.8E-19 139.0 10.4 129 58-186 46-193 (292)
82 2vyi_A SGTA protein; chaperone 99.5 3.1E-13 1E-17 110.9 16.2 113 84-196 12-125 (131)
83 2vsy_A XCC0866; transferase, g 99.5 1.7E-14 5.7E-19 151.3 10.7 155 21-186 4-163 (568)
84 2xev_A YBGF; tetratricopeptide 99.5 2.8E-13 9.7E-18 112.1 16.0 104 87-190 5-115 (129)
85 1ihg_A Cyclophilin 40; ppiase 99.5 1.3E-13 4.6E-18 137.2 16.5 116 84-199 223-355 (370)
86 3qou_A Protein YBBN; thioredox 99.5 3.6E-14 1.2E-18 136.0 11.7 135 60-196 129-266 (287)
87 2kck_A TPR repeat; tetratricop 99.5 7.8E-14 2.7E-18 111.6 11.6 105 78-184 2-110 (112)
88 2gw1_A Mitochondrial precursor 99.5 9.2E-15 3.1E-19 149.1 7.5 162 11-184 242-405 (514)
89 1elr_A TPR2A-domain of HOP; HO 99.5 3.3E-13 1.1E-17 110.9 15.6 115 84-199 4-126 (131)
90 3gyz_A Chaperone protein IPGC; 99.5 2.1E-14 7.1E-19 124.7 8.0 113 97-209 15-138 (151)
91 2r5s_A Uncharacterized protein 99.5 3.3E-14 1.1E-18 125.7 9.4 131 60-192 18-151 (176)
92 2gw1_A Mitochondrial precursor 99.5 5.5E-14 1.9E-18 143.3 11.5 166 14-190 312-488 (514)
93 1a17_A Serine/threonine protei 99.5 1.1E-13 3.7E-18 119.3 11.3 119 60-180 25-146 (166)
94 1na0_A Designed protein CTPR3; 99.5 1E-12 3.5E-17 106.8 16.6 111 85-195 10-121 (125)
95 1zu2_A Mitochondrial import re 99.5 8.3E-14 2.8E-18 120.9 10.4 94 95-188 13-128 (158)
96 3edt_B KLC 2, kinesin light ch 99.5 4.1E-14 1.4E-18 132.0 8.6 131 51-181 45-199 (283)
97 1p5q_A FKBP52, FK506-binding p 99.5 7.6E-14 2.6E-18 137.0 10.8 119 60-178 159-292 (336)
98 2if4_A ATFKBP42; FKBP-like, al 99.5 4.1E-14 1.4E-18 139.1 7.7 111 84-194 179-307 (338)
99 1hh8_A P67PHOX, NCF-2, neutrop 99.5 5.1E-13 1.7E-17 120.6 14.1 123 83-207 5-153 (213)
100 1wao_1 Serine/threonine protei 99.5 4.1E-14 1.4E-18 145.7 7.7 133 51-185 8-155 (477)
101 2c2l_A CHIP, carboxy terminus 99.5 3E-13 1E-17 129.3 12.7 99 86-184 6-105 (281)
102 3upv_A Heat shock protein STI1 99.5 1.8E-13 6.1E-18 113.5 9.5 103 60-164 16-125 (126)
103 3nf1_A KLC 1, kinesin light ch 99.5 1.1E-13 3.6E-18 131.5 8.7 171 10-181 31-225 (311)
104 2ond_A Cleavage stimulation fa 99.5 1.2E-12 4.1E-17 126.3 16.1 138 65-204 81-232 (308)
105 2lni_A Stress-induced-phosphop 99.4 1.6E-13 5.6E-18 113.4 8.2 113 52-166 19-133 (133)
106 2fo7_A Synthetic consensus TPR 99.4 2.2E-12 7.5E-17 105.9 14.9 119 87-205 4-133 (136)
107 3edt_B KLC 2, kinesin light ch 99.4 4.1E-13 1.4E-17 125.2 11.5 146 60-205 13-199 (283)
108 3k9i_A BH0479 protein; putativ 99.4 2.6E-13 8.8E-18 111.6 8.9 102 96-198 2-107 (117)
109 3sz7_A HSC70 cochaperone (SGT) 99.4 7.6E-14 2.6E-18 121.6 6.0 107 53-161 15-123 (164)
110 2ond_A Cleavage stimulation fa 99.4 8.7E-13 3E-17 127.2 14.0 174 23-206 81-272 (308)
111 4g1t_A Interferon-induced prot 99.4 3.7E-13 1.3E-17 136.4 11.2 181 11-194 99-290 (472)
112 3ulq_A Response regulator aspa 99.4 2.9E-13 9.9E-18 134.2 9.7 164 16-182 113-295 (383)
113 4g1t_A Interferon-induced prot 99.4 2.2E-13 7.5E-18 138.1 8.8 197 12-208 57-280 (472)
114 2ifu_A Gamma-SNAP; membrane fu 99.4 1.2E-13 3.9E-18 133.6 6.4 170 12-186 42-229 (307)
115 2vyi_A SGTA protein; chaperone 99.4 1.4E-12 4.6E-17 107.0 11.4 106 60-167 24-130 (131)
116 2fbn_A 70 kDa peptidylprolyl i 99.4 4.6E-13 1.6E-17 120.3 9.2 125 55-179 44-185 (198)
117 3rkv_A Putative peptidylprolyl 99.4 2.3E-13 7.7E-18 118.3 6.3 111 56-168 18-149 (162)
118 2vgx_A Chaperone SYCD; alterna 99.4 5.4E-13 1.8E-17 115.0 8.5 104 104-207 7-121 (148)
119 3nf1_A KLC 1, kinesin light ch 99.4 5.8E-13 2E-17 126.3 9.4 172 11-183 74-310 (311)
120 2r5s_A Uncharacterized protein 99.4 3.5E-13 1.2E-17 119.0 7.0 156 12-179 12-172 (176)
121 2if4_A ATFKBP42; FKBP-like, al 99.4 1.8E-13 6.3E-18 134.4 5.8 127 60-186 191-334 (338)
122 3k9i_A BH0479 protein; putativ 99.4 6.7E-13 2.3E-17 109.0 8.2 98 61-160 3-104 (117)
123 4gcn_A Protein STI-1; structur 99.4 4.6E-13 1.6E-17 112.2 7.3 98 54-154 13-119 (127)
124 2c2l_A CHIP, carboxy terminus 99.4 4.9E-13 1.7E-17 127.7 8.4 132 60-195 16-179 (281)
125 3q15_A PSP28, response regulat 99.4 8.9E-13 3.1E-17 130.6 10.5 163 18-183 113-293 (378)
126 2xcb_A PCRH, regulatory protei 99.4 8.2E-13 2.8E-17 112.4 8.8 109 55-165 24-134 (142)
127 2ifu_A Gamma-SNAP; membrane fu 99.4 1.1E-13 3.6E-18 133.8 3.5 151 54-206 41-225 (307)
128 1wao_1 Serine/threonine protei 99.4 7.7E-13 2.6E-17 136.2 9.6 114 87-200 9-123 (477)
129 3ulq_A Response regulator aspa 99.4 8.6E-13 2.9E-17 130.8 9.5 151 55-205 109-294 (383)
130 1kt0_A FKBP51, 51 kDa FK506-bi 99.4 7.4E-13 2.5E-17 135.5 9.2 119 55-173 274-407 (457)
131 1dce_A Protein (RAB geranylger 99.4 7.3E-12 2.5E-16 131.5 16.1 145 64-210 45-227 (567)
132 2qfc_A PLCR protein; TPR, HTH, 99.4 2.1E-12 7.1E-17 123.6 10.9 160 19-181 88-267 (293)
133 1ouv_A Conserved hypothetical 99.4 5.5E-12 1.9E-16 118.7 13.3 175 11-205 11-216 (273)
134 3qou_A Protein YBBN; thioredox 99.4 1.1E-12 3.9E-17 125.5 8.7 155 14-179 125-283 (287)
135 2hr2_A Hypothetical protein; a 99.4 1.1E-12 3.7E-17 114.1 7.6 96 60-155 23-140 (159)
136 3u3w_A Transcriptional activat 99.3 5.5E-12 1.9E-16 120.6 13.2 146 60-205 87-267 (293)
137 3u3w_A Transcriptional activat 99.3 2.5E-12 8.4E-17 123.0 10.1 160 19-181 88-267 (293)
138 1zu2_A Mitochondrial import re 99.3 1.2E-12 4.3E-17 113.5 7.2 90 60-151 14-125 (158)
139 2l6j_A TPR repeat-containing p 99.3 1.1E-12 3.6E-17 105.5 5.9 93 84-176 4-103 (111)
140 3dra_A Protein farnesyltransfe 99.3 2.9E-11 9.8E-16 117.1 17.1 148 60-209 44-220 (306)
141 1ouv_A Conserved hypothetical 99.3 4.3E-12 1.5E-16 119.4 10.7 141 55-204 12-179 (273)
142 4a1s_A PINS, partner of inscut 99.3 1.2E-13 4.3E-18 137.2 0.0 192 12-206 132-374 (411)
143 1hxi_A PEX5, peroxisome target 99.3 3.3E-12 1.1E-16 106.0 8.6 91 60-152 29-120 (121)
144 1elw_A TPR1-domain of HOP; HOP 99.3 1.7E-11 5.7E-16 98.6 12.4 101 60-162 16-117 (118)
145 2kat_A Uncharacterized protein 99.3 2.8E-11 9.5E-16 98.6 13.1 98 102-199 3-103 (115)
146 1na0_A Designed protein CTPR3; 99.3 2E-11 7E-16 98.9 12.3 108 56-165 16-125 (125)
147 2e2e_A Formate-dependent nitri 99.3 3.5E-12 1.2E-16 112.1 8.0 116 92-207 18-147 (177)
148 3sf4_A G-protein-signaling mod 99.3 5E-13 1.7E-17 131.7 2.8 169 13-184 54-260 (406)
149 3q49_B STIP1 homology and U bo 99.3 3.4E-12 1.2E-16 106.6 7.2 109 55-165 15-130 (137)
150 3dss_A Geranylgeranyl transfer 99.3 1.3E-10 4.3E-15 113.4 19.3 130 65-196 47-190 (331)
151 3q15_A PSP28, response regulat 99.3 1.3E-11 4.4E-16 122.2 11.8 146 60-205 113-291 (378)
152 3dra_A Protein farnesyltransfe 99.3 1.8E-11 6.2E-16 118.4 12.5 167 21-198 48-233 (306)
153 2qfc_A PLCR protein; TPR, HTH, 99.3 3.3E-11 1.1E-15 115.2 14.0 123 60-182 87-227 (293)
154 3sf4_A G-protein-signaling mod 99.3 7.7E-13 2.6E-17 130.4 2.6 191 12-205 93-337 (406)
155 1ihg_A Cyclophilin 40; ppiase 99.3 4.6E-12 1.6E-16 126.1 8.1 112 60-173 235-363 (370)
156 1dce_A Protein (RAB geranylger 99.3 7.5E-12 2.6E-16 131.5 10.1 130 64-195 89-236 (567)
157 4f3v_A ESX-1 secretion system 99.3 4.1E-11 1.4E-15 114.0 13.3 125 60-188 114-244 (282)
158 2dba_A Smooth muscle cell asso 99.3 3E-11 1E-15 101.7 11.1 107 55-163 34-145 (148)
159 3gw4_A Uncharacterized protein 99.3 1.7E-11 5.9E-16 109.1 10.0 145 59-205 3-177 (203)
160 3dss_A Geranylgeranyl transfer 99.3 1.2E-10 4E-15 113.7 16.4 124 64-189 90-231 (331)
161 3ro2_A PINS homolog, G-protein 99.2 1.7E-12 5.8E-17 123.6 2.9 168 13-183 50-255 (338)
162 4a1s_A PINS, partner of inscut 99.2 7.7E-12 2.6E-16 124.2 7.8 151 55-205 54-253 (411)
163 3q7a_A Farnesyltransferase alp 99.2 1.5E-10 5E-15 113.6 16.3 147 62-210 68-243 (349)
164 2xev_A YBGF; tetratricopeptide 99.2 7.4E-11 2.5E-15 97.3 12.2 105 60-166 14-125 (129)
165 3ro3_A PINS homolog, G-protein 99.2 1.3E-11 4.4E-16 104.7 7.6 124 60-183 21-161 (164)
166 2kat_A Uncharacterized protein 99.2 7.4E-11 2.5E-15 96.0 11.1 100 65-166 2-104 (115)
167 3rjv_A Putative SEL1 repeat pr 99.2 1.5E-10 5.1E-15 105.5 13.5 113 63-180 68-197 (212)
168 3rjv_A Putative SEL1 repeat pr 99.2 8.3E-11 2.8E-15 107.2 11.8 145 53-205 22-198 (212)
169 2ooe_A Cleavage stimulation fa 99.2 2.2E-10 7.6E-15 118.7 15.9 143 61-205 292-455 (530)
170 3ro2_A PINS homolog, G-protein 99.2 3E-11 1E-15 114.8 8.6 146 60-205 17-213 (338)
171 3q7a_A Farnesyltransferase alp 99.2 8E-11 2.7E-15 115.5 11.6 174 11-195 59-252 (349)
172 1elr_A TPR2A-domain of HOP; HO 99.2 3E-11 1E-15 98.9 6.3 104 60-166 16-127 (131)
173 1na3_A Designed protein CTPR2; 99.2 2.9E-10 9.8E-15 87.6 11.6 80 86-165 11-91 (91)
174 3gw4_A Uncharacterized protein 99.2 4.3E-11 1.5E-15 106.5 7.3 130 53-182 30-178 (203)
175 2kc7_A BFR218_protein; tetratr 99.1 4.9E-11 1.7E-15 94.2 6.6 85 121-205 4-91 (99)
176 2kc7_A BFR218_protein; tetratr 99.1 1.4E-10 4.8E-15 91.5 9.0 90 88-185 4-95 (99)
177 3ro3_A PINS homolog, G-protein 99.1 1.5E-10 5.3E-15 97.9 9.5 121 84-204 9-158 (164)
178 2kck_A TPR repeat; tetratricop 99.1 1E-10 3.5E-15 93.1 7.0 97 52-150 9-110 (112)
179 4f3v_A ESX-1 secretion system 99.1 4.2E-10 1.4E-14 107.1 12.3 117 90-207 108-240 (282)
180 2ooe_A Cleavage stimulation fa 99.1 5.3E-10 1.8E-14 115.8 13.1 139 66-206 256-422 (530)
181 1na3_A Designed protein CTPR2; 99.1 1.6E-09 5.5E-14 83.3 12.5 80 117-196 9-88 (91)
182 3ma5_A Tetratricopeptide repea 99.1 5.9E-10 2E-14 88.9 10.1 71 114-184 3-74 (100)
183 2l6j_A TPR repeat-containing p 99.1 1.6E-09 5.4E-14 86.5 12.0 68 117-184 4-71 (111)
184 1hz4_A MALT regulatory protein 99.1 1.1E-09 3.6E-14 107.6 13.0 145 60-204 26-203 (373)
185 3ma5_A Tetratricopeptide repea 99.0 1.9E-09 6.6E-14 85.8 9.4 87 78-166 3-92 (100)
186 3n71_A Histone lysine methyltr 98.9 3.4E-09 1.2E-13 109.0 11.6 119 60-178 321-462 (490)
187 1klx_A Cysteine rich protein B 98.9 1.9E-08 6.5E-13 85.2 12.6 111 62-181 9-127 (138)
188 3e4b_A ALGK; tetratricopeptide 98.9 4E-09 1.4E-13 107.4 9.2 126 53-189 180-322 (452)
189 3e4b_A ALGK; tetratricopeptide 98.8 1.3E-08 4.5E-13 103.6 12.3 166 21-205 194-388 (452)
190 2xm6_A Protein corresponding t 98.8 5.1E-08 1.8E-12 99.8 15.8 113 61-180 272-396 (490)
191 1hz4_A MALT regulatory protein 98.8 1.4E-08 4.9E-13 99.4 10.8 161 18-182 26-205 (373)
192 3n71_A Histone lysine methyltr 98.8 4.9E-08 1.7E-12 100.4 14.9 100 88-187 313-434 (490)
193 1xi4_A Clathrin heavy chain; a 98.8 3.6E-08 1.2E-12 110.2 14.1 140 12-180 1082-1250(1630)
194 2xm6_A Protein corresponding t 98.8 5.4E-08 1.9E-12 99.6 14.5 136 61-205 236-397 (490)
195 1pc2_A Mitochondria fission pr 98.8 7.2E-08 2.5E-12 82.7 12.5 91 100-190 14-110 (152)
196 3ly7_A Transcriptional activat 98.7 6.6E-08 2.3E-12 94.8 12.5 122 62-186 213-345 (372)
197 4b4t_Q 26S proteasome regulato 98.7 1.2E-08 4.1E-13 101.9 7.5 164 19-182 17-206 (434)
198 4b4t_Q 26S proteasome regulato 98.7 2.3E-08 7.9E-13 99.8 8.9 146 60-205 16-205 (434)
199 3bee_A Putative YFRE protein; 98.7 1.3E-07 4.5E-12 74.6 10.1 72 114-185 2-77 (93)
200 3mv2_B Coatomer subunit epsilo 98.6 2.6E-07 8.8E-12 88.9 12.7 136 67-204 85-240 (310)
201 2v5f_A Prolyl 4-hydroxylase su 98.6 4.9E-07 1.7E-11 72.5 12.4 73 120-192 8-87 (104)
202 2v5f_A Prolyl 4-hydroxylase su 98.6 5.2E-07 1.8E-11 72.4 11.3 75 85-159 6-88 (104)
203 3ly7_A Transcriptional activat 98.6 5.1E-07 1.8E-11 88.5 13.2 136 75-210 187-345 (372)
204 3qwp_A SET and MYND domain-con 98.6 7.6E-07 2.6E-11 90.0 15.0 100 89-188 292-413 (429)
205 3qww_A SET and MYND domain-con 98.6 4.6E-07 1.6E-11 91.7 12.9 95 94-188 308-424 (433)
206 1b89_A Protein (clathrin heavy 98.5 2.2E-08 7.5E-13 100.7 2.9 131 51-199 124-255 (449)
207 1pc2_A Mitochondria fission pr 98.5 5.2E-07 1.8E-11 77.3 10.6 98 62-161 12-115 (152)
208 1b89_A Protein (clathrin heavy 98.5 7.9E-07 2.7E-11 89.4 13.1 134 52-206 97-238 (449)
209 3mv2_B Coatomer subunit epsilo 98.5 2E-06 6.9E-11 82.7 14.9 119 60-183 112-243 (310)
210 1xi4_A Clathrin heavy chain; a 98.5 8.8E-07 3E-11 99.2 12.8 130 60-204 1088-1250(1630)
211 3qww_A SET and MYND domain-con 98.4 4.9E-07 1.7E-11 91.5 9.2 94 60-153 310-423 (433)
212 3qwp_A SET and MYND domain-con 98.4 7.7E-07 2.6E-11 90.0 9.8 105 60-164 299-426 (429)
213 3u64_A Protein TP_0956; tetrat 98.4 6.2E-06 2.1E-10 77.9 14.4 108 77-184 147-273 (301)
214 1nzn_A CGI-135 protein, fissio 98.3 2.1E-05 7.2E-10 65.0 13.5 97 96-192 13-115 (126)
215 1klx_A Cysteine rich protein B 98.2 6.3E-06 2.2E-10 69.4 10.7 101 97-205 8-127 (138)
216 3bee_A Putative YFRE protein; 98.2 4.6E-06 1.6E-10 65.5 9.1 71 78-150 2-76 (93)
217 1nzn_A CGI-135 protein, fissio 97.9 6.3E-05 2.2E-09 62.1 10.0 95 65-161 18-118 (126)
218 4e6h_A MRNA 3'-END-processing 97.8 0.00013 4.4E-09 77.9 13.8 113 66-180 327-463 (679)
219 3o48_A Mitochondria fission 1 97.8 0.00047 1.6E-08 57.1 12.8 76 115-190 38-117 (134)
220 3u64_A Protein TP_0956; tetrat 97.8 5E-05 1.7E-09 71.7 7.9 91 60-150 175-273 (301)
221 1y8m_A FIS1; mitochondria, unk 97.7 0.00071 2.4E-08 56.7 12.9 76 114-189 36-115 (144)
222 4e6h_A MRNA 3'-END-processing 97.7 0.00015 5.2E-09 77.3 11.1 144 60-205 355-534 (679)
223 3o48_A Mitochondria fission 1 97.4 0.0016 5.3E-08 54.0 11.3 82 81-162 37-123 (134)
224 1y8m_A FIS1; mitochondria, unk 97.3 0.0029 1E-07 53.0 12.2 80 82-161 37-121 (144)
225 3ffl_A Anaphase-promoting comp 97.3 0.0011 3.9E-08 57.0 9.0 90 87-176 23-147 (167)
226 4h7y_A Dual specificity protei 97.2 0.0045 1.5E-07 52.4 11.7 109 76-187 7-130 (161)
227 3ffl_A Anaphase-promoting comp 96.9 0.001 3.5E-08 57.3 5.1 102 59-161 31-165 (167)
228 2uy1_A Cleavage stimulation fa 96.9 0.012 4.1E-07 60.2 14.1 120 66-189 197-358 (493)
229 4g26_A Pentatricopeptide repea 96.8 0.023 7.8E-07 58.2 15.8 141 60-201 38-201 (501)
230 4g26_A Pentatricopeptide repea 96.7 0.022 7.5E-07 58.4 14.2 121 60-181 82-205 (501)
231 4gns_B Protein CSD3, chitin bi 96.3 0.014 4.6E-07 62.6 9.9 111 64-177 265-397 (754)
232 2uy1_A Cleavage stimulation fa 96.0 0.1 3.6E-06 53.1 14.8 115 60-177 225-380 (493)
233 3kae_A CDC27, possible protein 95.2 0.39 1.3E-05 41.3 12.7 119 60-187 14-150 (242)
234 2ff4_A Probable regulatory pro 94.6 0.35 1.2E-05 47.5 13.0 91 89-179 120-233 (388)
235 1ya0_A SMG-7 transcript varian 94.4 0.23 8E-06 50.5 11.2 74 89-162 157-231 (497)
236 1ya0_A SMG-7 transcript varian 94.3 0.21 7.3E-06 50.9 10.7 78 119-196 154-231 (497)
237 4b4t_R RPN7, 26S proteasome re 94.1 0.11 3.8E-06 51.9 8.1 97 87-183 134-240 (429)
238 3mkq_B Coatomer subunit alpha; 93.4 0.89 3E-05 39.5 11.5 99 60-177 17-115 (177)
239 3kae_A CDC27, possible protein 93.2 2.4 8.1E-05 36.6 13.3 82 60-148 45-145 (242)
240 4gns_B Protein CSD3, chitin bi 93.1 0.31 1.1E-05 52.1 9.9 57 87-143 340-397 (754)
241 3txn_A 26S proteasome regulato 92.4 0.57 1.9E-05 46.2 10.0 93 89-181 104-211 (394)
242 1zbp_A Hypothetical protein VP 92.3 2.8 9.5E-05 38.8 13.8 116 59-184 8-133 (273)
243 4h7y_A Dual specificity protei 92.1 1.2 3.9E-05 37.7 9.9 100 65-166 36-142 (161)
244 4b4t_S RPN3, 26S proteasome re 92.0 0.29 9.8E-06 49.8 7.4 138 60-197 148-316 (523)
245 3spa_A Mtrpol, DNA-directed RN 90.8 3 0.0001 46.0 14.0 96 86-181 129-231 (1134)
246 1zbp_A Hypothetical protein VP 90.7 1.3 4.3E-05 41.1 9.6 60 93-152 6-66 (273)
247 3mkq_A Coatomer beta'-subunit; 90.6 1.3 4.4E-05 47.0 11.2 44 60-110 664-707 (814)
248 2ff4_A Probable regulatory pro 90.0 1.4 4.7E-05 43.3 10.0 84 62-145 129-233 (388)
249 3mkq_A Coatomer beta'-subunit; 88.2 1.9 6.7E-05 45.6 10.5 77 94-174 662-746 (814)
250 3txn_A 26S proteasome regulato 88.0 7.9 0.00027 37.9 13.8 80 120-199 102-190 (394)
251 4b4t_P 26S proteasome regulato 86.5 7.5 0.00026 38.7 13.0 97 84-180 137-247 (445)
252 4fhn_B Nucleoporin NUP120; pro 84.6 2.4 8E-05 47.8 9.0 90 89-182 817-930 (1139)
253 3mkq_B Coatomer subunit alpha; 82.1 13 0.00043 32.1 10.6 93 92-199 13-113 (177)
254 4b4t_S RPN3, 26S proteasome re 80.0 4.5 0.00015 41.1 8.1 71 80-150 227-303 (523)
255 3spa_A Mtrpol, DNA-directed RN 74.1 9.1 0.00031 42.3 8.9 84 60-146 139-230 (1134)
256 1qsa_A Protein (soluble lytic 74.1 12 0.00042 38.9 9.7 117 63-179 229-347 (618)
257 4a5x_A MITD1, MIT domain-conta 70.9 3.3 0.00011 31.2 3.3 35 78-112 10-44 (86)
258 1wy6_A Hypothetical protein ST 68.8 28 0.00097 28.9 8.6 61 120-180 93-154 (172)
259 4b4t_R RPN7, 26S proteasome re 68.1 19 0.00064 35.5 9.2 88 60-147 143-238 (429)
260 4a5x_A MITD1, MIT domain-conta 67.5 36 0.0012 25.4 8.7 48 158-205 23-77 (86)
261 4gq2_M Nucleoporin NUP120; bet 66.0 45 0.0016 36.5 12.5 95 89-187 815-934 (950)
262 4b4t_P 26S proteasome regulato 65.6 32 0.0011 34.0 10.4 91 56-146 144-247 (445)
263 3ax2_A Mitochondrial import re 63.7 11 0.00037 27.4 4.7 30 87-116 20-49 (73)
264 3ax2_A Mitochondrial import re 63.0 22 0.00076 25.8 6.2 38 155-192 21-58 (73)
265 2wpv_A GET4, UPF0363 protein Y 61.2 1.1E+02 0.0036 28.8 12.5 27 149-175 132-158 (312)
266 3lpz_A GET4 (YOR164C homolog); 60.5 51 0.0018 31.3 10.2 26 149-174 134-159 (336)
267 2crb_A Nuclear receptor bindin 59.8 11 0.00038 28.6 4.2 26 153-178 17-42 (97)
268 2vkj_A TM1634; membrane protei 58.0 38 0.0013 25.5 6.8 47 83-129 52-102 (106)
269 2v6y_A AAA family ATPase, P60 57.8 13 0.00046 27.6 4.5 37 169-205 36-72 (83)
270 2w2u_A Hypothetical P60 katani 57.3 12 0.00042 27.8 4.2 26 87-112 22-47 (83)
271 2w2u_A Hypothetical P60 katani 56.8 12 0.00041 27.8 4.1 35 170-204 45-79 (83)
272 2ijq_A Hypothetical protein; s 55.4 56 0.0019 27.5 8.5 29 88-116 36-64 (161)
273 1qsa_A Protein (soluble lytic 55.4 1.6E+02 0.0054 30.4 13.8 116 62-180 266-410 (618)
274 4gq2_M Nucleoporin NUP120; bet 55.0 84 0.0029 34.3 12.2 85 76-162 834-947 (950)
275 2v6y_A AAA family ATPase, P60 54.1 15 0.00051 27.3 4.2 26 87-112 14-39 (83)
276 3t5v_B Nuclear mRNA export pro 52.2 33 0.0011 34.1 7.6 100 99-198 141-271 (455)
277 4fhn_B Nucleoporin NUP120; pro 51.8 53 0.0018 36.7 10.1 95 79-175 839-962 (1139)
278 1wfd_A Hypothetical protein 15 49.9 25 0.00084 26.7 4.9 37 169-205 40-76 (93)
279 1om2_A Protein (mitochondrial 49.4 19 0.00064 27.6 4.1 30 87-116 23-52 (95)
280 2cwy_A Hypothetical protein TT 49.1 38 0.0013 25.7 5.9 28 89-116 6-33 (94)
281 2cpt_A SKD1 protein, vacuolar 48.0 37 0.0012 27.0 5.9 38 168-205 42-80 (117)
282 1om2_A Protein (mitochondrial 44.2 36 0.0012 26.0 4.9 39 155-193 24-62 (95)
283 2crb_A Nuclear receptor bindin 44.1 29 0.001 26.3 4.3 25 119-143 17-41 (97)
284 1wfd_A Hypothetical protein 15 42.1 29 0.00098 26.3 4.2 26 87-112 18-43 (93)
285 3esl_A Checkpoint serine/threo 42.0 1.3E+02 0.0043 26.3 8.8 82 117-202 80-163 (202)
286 2v6x_A Vacuolar protein sortin 41.5 30 0.001 25.6 4.2 26 87-112 16-41 (85)
287 2ynq_A ESSB; membrane protein, 41.1 1.2E+02 0.0041 25.4 8.1 81 89-175 13-97 (161)
288 4a1g_A Mitotic checkpoint seri 40.2 1.4E+02 0.0049 24.7 8.6 49 101-149 82-133 (152)
289 3t5v_B Nuclear mRNA export pro 39.6 53 0.0018 32.7 6.8 63 88-150 180-254 (455)
290 3t5x_A PCI domain-containing p 39.5 52 0.0018 28.7 6.1 56 78-133 8-69 (203)
291 2v6x_A Vacuolar protein sortin 39.2 1.1E+02 0.0038 22.3 7.9 45 161-205 23-74 (85)
292 2ijq_A Hypothetical protein; s 39.0 1.7E+02 0.0057 24.5 8.9 59 121-179 36-103 (161)
293 2cpt_A SKD1 protein, vacuolar 38.9 32 0.0011 27.4 4.1 24 87-110 21-44 (117)
294 3t5x_A PCI domain-containing p 38.5 52 0.0018 28.7 6.0 32 118-149 15-46 (203)
295 3esl_A Checkpoint serine/threo 36.8 2.1E+02 0.0073 24.9 10.1 51 98-148 93-146 (202)
296 2rpa_A Katanin P60 ATPase-cont 34.9 23 0.00078 26.1 2.4 27 87-113 15-41 (78)
297 2wvi_A Mitotic checkpoint seri 34.9 1.5E+02 0.0052 24.9 8.0 66 65-130 77-142 (164)
298 2yvy_A MGTE, Mg2+ transporter 32.9 35 0.0012 31.1 4.1 39 375-413 93-133 (278)
299 1wy6_A Hypothetical protein ST 31.7 1.6E+02 0.0055 24.4 7.2 88 53-147 63-155 (172)
300 4aez_C MAD3, mitotic spindle c 30.6 1.5E+02 0.0052 26.3 7.6 49 101-149 131-182 (223)
301 2cfu_A SDSA1; SDS-hydrolase, l 30.4 1.1E+02 0.0037 31.9 7.7 48 119-166 451-498 (658)
302 4gq4_A Menin; tumor suppressor 29.9 2.1E+02 0.0071 28.1 8.8 96 89-196 247-354 (489)
303 2oux_A Magnesium transporter; 29.8 36 0.0012 31.2 3.6 36 375-411 98-133 (286)
304 3mv2_A Coatomer subunit alpha; 28.8 3.7E+02 0.013 25.2 13.5 106 87-200 117-252 (325)
305 3re2_A Predicted protein; meni 28.4 1.2E+02 0.004 29.3 6.6 77 89-179 240-324 (472)
306 4aez_C MAD3, mitotic spindle c 27.6 3.2E+02 0.011 24.1 9.5 65 134-201 131-197 (223)
307 3myv_A SUSD superfamily protei 27.5 1E+02 0.0035 30.3 6.7 32 149-180 188-219 (454)
308 3mcx_A SUSD superfamily protei 27.2 1.2E+02 0.004 30.1 7.1 33 150-182 201-233 (477)
309 4ady_A RPN2, 26S proteasome re 25.7 3.5E+02 0.012 29.5 10.8 134 60-198 386-535 (963)
310 3kez_A Putative sugar binding 25.6 1.1E+02 0.0038 30.1 6.6 32 149-180 194-225 (461)
311 2cfu_A SDSA1; SDS-hydrolase, l 25.3 1.6E+02 0.0053 30.7 7.8 49 152-200 450-498 (658)
312 2gvs_A Chemosensory protein CS 24.5 67 0.0023 25.2 3.6 33 397-435 59-91 (109)
313 3i4g_A SUSD-like carbohydrate 24.4 3.8E+02 0.013 26.8 10.4 64 117-180 123-227 (528)
314 3qnk_A Putative lipoprotein; a 24.3 1.9E+02 0.0066 28.8 8.1 63 117-179 109-210 (517)
315 2wpv_A GET4, UPF0363 protein Y 23.2 2.1E+02 0.0071 26.7 7.5 33 148-180 184-217 (312)
316 3mkr_B Coatomer subunit alpha; 23.1 4.7E+02 0.016 24.5 13.8 111 87-201 105-244 (320)
317 3lpz_A GET4 (YOR164C homolog); 22.8 4.8E+02 0.016 24.5 11.7 24 117-140 136-159 (336)
318 2dl1_A Spartin; SPG20, MIT, st 22.8 31 0.0011 27.4 1.4 63 133-203 19-82 (116)
319 3u84_A Menin; MLL, JUND, ledgf 22.7 1.6E+02 0.0055 28.9 6.6 76 89-178 262-345 (550)
320 3hdx_A SUSD homolog, SUSD supe 22.7 1.8E+02 0.0062 28.6 7.5 30 151-180 197-226 (478)
321 2yvy_A MGTE, Mg2+ transporter 21.3 1.6E+02 0.0055 26.5 6.3 80 332-413 33-118 (278)
322 1ow5_A Serine/threonine-protei 20.3 90 0.0031 23.2 3.4 59 331-389 14-75 (85)
323 3jq1_A SUSD superfamily protei 20.3 1.6E+02 0.0054 29.2 6.5 62 117-178 110-207 (481)
324 2ca5_A MXIH; transport protein 20.2 1.3E+02 0.0044 22.3 4.1 35 165-199 24-58 (85)
325 3lew_A SUSD-like carbohydrate 20.0 1.7E+02 0.0058 29.1 6.7 33 149-181 201-233 (495)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.84 E-value=1.4e-20 Score=158.52 Aligned_cols=120 Identities=30% Similarity=0.508 Sum_probs=111.7
Q ss_pred hhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHH
Q 013696 74 SLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIK 152 (438)
Q Consensus 74 al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~ 152 (438)
+..++|+...+ ++++|+.|++.|+|++|+.+|+++++++|. +.+|+++|.||..+|++++|+.+|++++.++|+++.
T Consensus 5 ~a~inP~~a~~--~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 82 (126)
T 4gco_A 5 LAYINPELAQE--EKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIK 82 (126)
T ss_dssp --CCCHHHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHCHHHHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhH
Confidence 34467776666 889999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 013696 153 AYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVK 195 (438)
Q Consensus 153 a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~ 195 (438)
+|+++|.++..+|++++|+.+|+++++++|++.+++..+..++
T Consensus 83 a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 83 GYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 9999999999999999999999999999999999988877653
No 2
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.82 E-value=4.1e-20 Score=160.30 Aligned_cols=138 Identities=12% Similarity=0.018 Sum_probs=123.9
Q ss_pred CCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhc
Q 013696 54 PSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR 131 (438)
Q Consensus 54 ~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~ 131 (438)
++|..| ..|++++|+..+.+++..+|..+.+ ++.+|.+|+..|+|++|+.+|.++++++|+ +.+|+++|.+|..+|
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~--~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~ 79 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQKSIK--GFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEE 79 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHHHHTT--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCcccHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 467777 7799999999999999999887777 679999999999999999999999999999 999999999999999
Q ss_pred CHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHH-HHHHHhhCCCCHHHHHHHHH
Q 013696 132 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIED-SEFALRLEPQNQEIKKQLAE 193 (438)
Q Consensus 132 ~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~-~~~al~l~P~~~~~~~~l~~ 193 (438)
++++|+.+|++++.++|+++.+|+++|.++..+|++++|... ++++++++|+++.+......
T Consensus 80 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ 142 (150)
T 4ga2_A 80 NTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQ 142 (150)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHH
Confidence 999999999999999999999999999999999999887765 59999999999988654443
No 3
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.81 E-value=1.6e-19 Score=166.00 Aligned_cols=172 Identities=16% Similarity=0.146 Sum_probs=140.3
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHH
Q 013696 11 DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKE 89 (438)
Q Consensus 11 ~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~ 89 (438)
.++..+...++|++++....+.+...+ .....+..+|..| ..|++++|+..|++++.++|++..+ +..
T Consensus 10 ~lg~~~~~~g~~~~A~~~~~~al~~~p---------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a--~~~ 78 (217)
T 2pl2_A 10 RLGVQLYALGRYDAALTLFERALKENP---------QDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGG--YMV 78 (217)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTSS---------SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC---------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH--HHH
Confidence 345566677788888888888886554 1222344455555 7888999999999999999888887 668
Q ss_pred HHHHHHHh-----------ccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHH
Q 013696 90 LGNECFKQ-----------KKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRR 157 (438)
Q Consensus 90 ~g~~~~~~-----------g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~l 157 (438)
+|.++... |++++|+.+|.++++++|+ +.++.++|.+|..+|++++|+..|++++.++ +++.+++.+
T Consensus 79 lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~l 157 (217)
T 2pl2_A 79 LSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSAL 157 (217)
T ss_dssp HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHH
T ss_pred HHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHH
Confidence 89999988 9999999999999999988 8888999999999999999999999999988 888999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 013696 158 ATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (438)
Q Consensus 158 g~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a 194 (438)
|.++..+|++++|+..|+++++++|++..++..+..+
T Consensus 158 a~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~ 194 (217)
T 2pl2_A 158 AELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASA 194 (217)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 9999999999999999999999999888775544433
No 4
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.80 E-value=4.4e-19 Score=157.41 Aligned_cols=154 Identities=18% Similarity=0.201 Sum_probs=143.6
Q ss_pred CCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHh
Q 013696 53 KPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL 130 (438)
Q Consensus 53 ~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l 130 (438)
..+|..| ..|++++|+..|++++.++|++..+ +..+|.+|...|++++|+..+.+++...|. +.++.++|.++...
T Consensus 9 ~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (184)
T 3vtx_A 9 MDIGDKKRTKGDFDGAIRAYKKVLKADPNNVET--LLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMI 86 (184)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHc
Confidence 3456666 7899999999999999999999988 779999999999999999999999999999 99999999999999
Q ss_pred cCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH----------HHHHHHHHHHHHH
Q 013696 131 RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLAEVKSLYEK 200 (438)
Q Consensus 131 ~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~~a~~~~~k 200 (438)
++++.|+..+.+++.++|.++.++..+|.++..+|++++|+..|+++++++|.+..+ .+++.+|...|++
T Consensus 87 ~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 166 (184)
T 3vtx_A 87 DEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKK 166 (184)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999887 4677899999999
Q ss_pred HHhhchhh
Q 013696 201 EVFQKASK 208 (438)
Q Consensus 201 a~~~~~~~ 208 (438)
++.+++..
T Consensus 167 al~~~p~~ 174 (184)
T 3vtx_A 167 ALEKEEKK 174 (184)
T ss_dssp HHHTTHHH
T ss_pred HHhCCccC
Confidence 99887654
No 5
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.79 E-value=1.4e-19 Score=195.08 Aligned_cols=157 Identities=23% Similarity=0.230 Sum_probs=141.7
Q ss_pred cccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHH
Q 013696 47 SLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRA 124 (438)
Q Consensus 47 ~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la 124 (438)
+....+..+|..| .+|++++|+.+|+++++++|++..+ +.++|.+|...|++++|+.+|+++++++|+ +.+|+++|
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a--~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg 84 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAA--HSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMG 84 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 3344455667777 8999999999999999999999988 779999999999999999999999999999 99999999
Q ss_pred HHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH----------HH
Q 013696 125 MAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLA----------EV 194 (438)
Q Consensus 125 ~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~----------~a 194 (438)
.+|..+|++++|+.+|++|++++|+++.+|+++|.+|..+|++++|+.+|+++++++|++..++..+. +|
T Consensus 85 ~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A 164 (723)
T 4gyw_A 85 NTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDY 164 (723)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998855443 45
Q ss_pred HHHHHHHHhhc
Q 013696 195 KSLYEKEVFQK 205 (438)
Q Consensus 195 ~~~~~ka~~~~ 205 (438)
.+.|++++.+.
T Consensus 165 ~~~~~kal~l~ 175 (723)
T 4gyw_A 165 DERMKKLVSIV 175 (723)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 66666666654
No 6
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.79 E-value=6.9e-19 Score=156.16 Aligned_cols=165 Identities=19% Similarity=0.225 Sum_probs=150.6
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHH
Q 013696 11 DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKE 89 (438)
Q Consensus 11 ~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~ 89 (438)
.++..+...++|+++++...+.++..| .....+..+|.+| ..|++++|+..+.+++...|....+ +..
T Consensus 10 ~lG~~~~~~g~~~~A~~~~~~al~~~p---------~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~--~~~ 78 (184)
T 3vtx_A 10 DIGDKKRTKGDFDGAIRAYKKVLKADP---------NNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEA--YYI 78 (184)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHH--HHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC---------CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHH--HHH
Confidence 567888899999999999999998765 1223455567777 8999999999999999999998888 669
Q ss_pred HHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHH
Q 013696 90 LGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLK 168 (438)
Q Consensus 90 ~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~ 168 (438)
+|..+...++++.|+..+.+++.++|. ..++..+|.+|..+|++++|+.+|+++++++|+++.+|+++|.+|..+|+++
T Consensus 79 ~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~ 158 (184)
T 3vtx_A 79 LGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRD 158 (184)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCHH
Q 013696 169 ESIEDSEFALRLEPQNQE 186 (438)
Q Consensus 169 eA~~~~~~al~l~P~~~~ 186 (438)
+|+.+|+++++++|+++.
T Consensus 159 ~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 159 EAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp HHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHhCCccCHH
Confidence 999999999999997643
No 7
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.79 E-value=1.3e-18 Score=159.88 Aligned_cols=151 Identities=21% Similarity=0.198 Sum_probs=139.5
Q ss_pred CCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHh---
Q 013696 56 PSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL--- 130 (438)
Q Consensus 56 ~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l--- 130 (438)
|..| ..|++++|+..|++++..+|+++.+ +..+|.++...|++++|+.+|+++++++|+ +.+++++|.+|..+
T Consensus 12 g~~~~~~g~~~~A~~~~~~al~~~p~~~~a--~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 89 (217)
T 2pl2_A 12 GVQLYALGRYDAALTLFERALKENPQDPEA--LYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQ 89 (217)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTSSSCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhh
Confidence 4444 7899999999999999999999998 779999999999999999999999999999 99999999999999
Q ss_pred --------cCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH----------HHHHH
Q 013696 131 --------RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLA 192 (438)
Q Consensus 131 --------~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~ 192 (438)
|++++|+..|++++.++|+++.+|+.+|.++..+|++++|+..|+++++++ +++.+ .+++.
T Consensus 90 ~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~ 168 (217)
T 2pl2_A 90 AEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLD 168 (217)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHH
T ss_pred hhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999 88776 45677
Q ss_pred HHHHHHHHHHhhchhhh
Q 013696 193 EVKSLYEKEVFQKASKT 209 (438)
Q Consensus 193 ~a~~~~~ka~~~~~~~~ 209 (438)
+|...|++++...+...
T Consensus 169 ~A~~~~~~al~~~P~~~ 185 (217)
T 2pl2_A 169 EALAQYAKALEQAPKDL 185 (217)
T ss_dssp HHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHhCCCCh
Confidence 88888888888776544
No 8
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.76 E-value=4.4e-18 Score=148.09 Aligned_cols=115 Identities=12% Similarity=0.057 Sum_probs=109.8
Q ss_pred HHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 013696 69 SHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLD 147 (438)
Q Consensus 69 ~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~ 147 (438)
..+.+++.++|++..+ ++.+|.+++..|+|++|+.+|++++.++|. +.+|+++|.||..+|+|++|+.+|++++.++
T Consensus 23 ~~l~~al~l~p~~~~~--~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~ 100 (151)
T 3gyz_A 23 ATLKDINAIPDDMMDD--IYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALG 100 (151)
T ss_dssp CCTGGGCCSCHHHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred CCHHHHhCCCHHHHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC
Confidence 3467888899988888 779999999999999999999999999999 9999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 013696 148 DRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQ 185 (438)
Q Consensus 148 p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~ 185 (438)
|+++.+|+++|.+|..+|++++|+.+|++++++.|+.+
T Consensus 101 P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 101 KNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp SSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999999999999999865
No 9
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.76 E-value=7.5e-18 Score=168.80 Aligned_cols=135 Identities=14% Similarity=0.076 Sum_probs=128.0
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhcc-HHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKK-FKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAE 137 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~-y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~ 137 (438)
..|++++|+..|+++|.++|++..+ |+.+|.++...|+ |++|+.+|++++.++|+ ..+|+++|.+|..+|++++|+
T Consensus 109 ~~g~~~~Al~~~~~al~l~P~~~~a--~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl 186 (382)
T 2h6f_A 109 RDERSERAFKLTRDAIELNAANYTV--WHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQEL 186 (382)
T ss_dssp HTCCCHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHH
T ss_pred HCCChHHHHHHHHHHHHhCccCHHH--HHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHH
Confidence 5689999999999999999999998 7799999999997 99999999999999999 999999999999999999999
Q ss_pred HHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 013696 138 DDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKS 196 (438)
Q Consensus 138 ~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (438)
.+|+++|.++|+++.+|+++|.++..+|++++|+.+|+++++++|++..++..+..+..
T Consensus 187 ~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~ 245 (382)
T 2h6f_A 187 EFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVIS 245 (382)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998766655443
No 10
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.75 E-value=5.6e-18 Score=146.52 Aligned_cols=131 Identities=13% Similarity=0.061 Sum_probs=119.0
Q ss_pred hHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 013696 67 PVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALN 145 (438)
Q Consensus 67 Ai~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~ 145 (438)
+-..|++++.++|++..+ ++.+|..++..|+|++|+.+|.+++.++|. +.+|+++|.+|..+|+|++|+.+|++++.
T Consensus 6 ~~~~~~~al~~~p~~~~~--~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 6 GGGTIAMLNEISSDTLEQ--LYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp CCCSHHHHTTCCHHHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhhHHHHHcCCHhhHHH--HHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 345688999999887777 779999999999999999999999999998 99999999999999999999999999999
Q ss_pred cCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 013696 146 LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 199 (438)
Q Consensus 146 l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 199 (438)
++|+++.+++++|.++..+|++++|+.+|++++.++|+++........+...+.
T Consensus 84 l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~ 137 (148)
T 2vgx_A 84 MDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSMLE 137 (148)
T ss_dssp HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHH
T ss_pred cCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998776555555555443
No 11
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.75 E-value=3.8e-18 Score=156.84 Aligned_cols=171 Identities=12% Similarity=0.116 Sum_probs=103.0
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHH
Q 013696 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKEL 90 (438)
Q Consensus 12 l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~ 90 (438)
.+..+-..++|++++....+.+...++. ....+..+|.+| ..|++++|+..|.+++..+|++..+ +..+
T Consensus 13 ~g~~~~~~~~~~~A~~~~~~al~~~~~~--------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~--~~~l 82 (228)
T 4i17_A 13 EGNDALNAKNYAVAFEKYSEYLKLTNNQ--------DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANA--YIGK 82 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHTTTC--------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHH--HHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHhccCCC--------CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHH--HHHH
Confidence 3444455566666666666666544300 011122244444 6666666666666666666665555 5566
Q ss_pred HHHHHHhccHHHHHHHHHHHhccCCC-H-------HHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCc--cHHHHHHHHHH
Q 013696 91 GNECFKQKKFKEAIDCYSRSIALSPT-A-------VAYANRAMAYLKLRRFQEAEDDCTEALNLDDR--YIKAYSRRATA 160 (438)
Q Consensus 91 g~~~~~~g~y~~Ai~~y~~al~~~p~-~-------~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~--~~~a~~~lg~a 160 (438)
|.+|...|+|++|+.+|.++++++|+ + .+|.++|.++..+|++++|+.+|++++.++|+ ++.+|+++|.+
T Consensus 83 ~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~ 162 (228)
T 4i17_A 83 SAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVL 162 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHH
Confidence 66666666666666666666666665 4 45666666666666666666666666666666 66666666666
Q ss_pred HHHcCCH---------------------------HHHHHHHHHHHhhCCCCHHHHHHHH
Q 013696 161 RKELGKL---------------------------KESIEDSEFALRLEPQNQEIKKQLA 192 (438)
Q Consensus 161 ~~~lg~~---------------------------~eA~~~~~~al~l~P~~~~~~~~l~ 192 (438)
|..+|+. ++|+.+|+++++++|++..+...+.
T Consensus 163 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~ 221 (228)
T 4i17_A 163 FYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQD 221 (228)
T ss_dssp HHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 6666665 5666666666666666655544443
No 12
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.75 E-value=1.7e-17 Score=152.53 Aligned_cols=134 Identities=17% Similarity=0.153 Sum_probs=123.5
Q ss_pred CCCCcC-cCCCccchHHHHHhhhcCCC-CChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHh
Q 013696 54 PSPSGN-SYSRNYDPVSHISSSLMNEE-STPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL 130 (438)
Q Consensus 54 ~~~~~y-~~g~~~eAi~~~~~al~~~p-~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l 130 (438)
..|..| ..|++++|+..|.+++.++| .+..+ ++.+|.+++..|+|++|+.+|.+++.++|. ..+|.++|.+|..+
T Consensus 12 ~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~--~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 89 (228)
T 4i17_A 12 NEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVT--AYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDM 89 (228)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHccCHHHHHHHHHHHHhccCCCCcHH--HHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHc
Confidence 344455 88999999999999999998 77766 668999999999999999999999999999 99999999999999
Q ss_pred cCHHHHHHHHHHHhhcCCccH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CHHHHH
Q 013696 131 RRFQEAEDDCTEALNLDDRYI-------KAYSRRATARKELGKLKESIEDSEFALRLEPQ--NQEIKK 189 (438)
Q Consensus 131 ~~~~eA~~~~~~al~l~p~~~-------~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~--~~~~~~ 189 (438)
|++++|+..|++++.++|+++ .+|+.+|.++..+|++++|+..|+++++++|+ +..++.
T Consensus 90 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 157 (228)
T 4i17_A 90 KNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALY 157 (228)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHH
Confidence 999999999999999999998 67999999999999999999999999999999 766643
No 13
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.74 E-value=6.2e-18 Score=147.19 Aligned_cols=117 Identities=21% Similarity=0.175 Sum_probs=108.0
Q ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-------------HHHHHHHHHHHHHhcCHHHHHHHHHHHhhc---
Q 013696 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------------AVAYANRAMAYLKLRRFQEAEDDCTEALNL--- 146 (438)
Q Consensus 83 ~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-------------~~~~~~la~~~~~l~~~~eA~~~~~~al~l--- 146 (438)
.+..++..|+.+++.|+|++|+.+|+++|+++|+ +.+|.|+|.|+..+|+|++|+.+|++||.+
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 4556889999999999999999999999999987 239999999999999999999999999999
Q ss_pred ----CCccHHHH----HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 013696 147 ----DDRYIKAY----SRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 199 (438)
Q Consensus 147 ----~p~~~~a~----~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 199 (438)
+|+++++| +++|.++..+|++++|+.+|++++.++|++..+...+..+.....
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~ 150 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAI 150 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHH
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 99999999 999999999999999999999999999999888777777766554
No 14
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.73 E-value=3.3e-18 Score=171.42 Aligned_cols=174 Identities=9% Similarity=0.057 Sum_probs=151.5
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCC-ccchHHHHHhhhcCCCCChhHHHHHH
Q 013696 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSR-NYDPVSHISSSLMNEESTPDATSEKE 89 (438)
Q Consensus 12 l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~-~~eAi~~~~~al~~~p~~~~a~~~~~ 89 (438)
++..+...+.+++++....+.+...+ .....+...|.+| .+|+ +++|+..|++++.++|++..+ |+.
T Consensus 103 lg~~~~~~g~~~~Al~~~~~al~l~P---------~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a--~~~ 171 (382)
T 2h6f_A 103 FRAVLQRDERSERAFKLTRDAIELNA---------ANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQV--WHH 171 (382)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHH--HHH
T ss_pred HHHHHHHCCChHHHHHHHHHHHHhCc---------cCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHH--HHH
Confidence 45566666779999999999997765 1222344455566 7886 999999999999999999988 779
Q ss_pred HHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHH-cCCH
Q 013696 90 LGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKE-LGKL 167 (438)
Q Consensus 90 ~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~-lg~~ 167 (438)
+|.++...|+|++|+.+|+++|+++|+ ..+|+++|.++..+|++++|+.+|+++|.++|++..+|+++|.++.. .|.+
T Consensus 172 ~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~ 251 (382)
T 2h6f_A 172 RRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYN 251 (382)
T ss_dssp HHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcc
Confidence 999999999999999999999999999 99999999999999999999999999999999999999999999999 5555
Q ss_pred HHH-----HHHHHHHHhhCCCCHHHHHHHHHHHH
Q 013696 168 KES-----IEDSEFALRLEPQNQEIKKQLAEVKS 196 (438)
Q Consensus 168 ~eA-----~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (438)
++| +.+|++++.++|++..++..+..++.
T Consensus 252 ~eA~~~~el~~~~~Al~l~P~~~~a~~~l~~ll~ 285 (382)
T 2h6f_A 252 DRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQ 285 (382)
T ss_dssp SHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 888 59999999999999988776665443
No 15
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.72 E-value=5.6e-18 Score=182.69 Aligned_cols=164 Identities=16% Similarity=0.185 Sum_probs=150.9
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHH
Q 013696 10 LDFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEK 88 (438)
Q Consensus 10 ~~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~ 88 (438)
..++..+.++++|++++..+.+.++..+ .....+..+|..| .+|++++|+..|+++++++|++..+ ++
T Consensus 13 ~nLG~~~~~~G~~~eAi~~~~kAl~l~P---------~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a--~~ 81 (723)
T 4gyw_A 13 NNLANIKREQGNIEEAVRLYRKALEVFP---------EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADA--YS 81 (723)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCS---------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCC---------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HH
Confidence 4578889999999999999999998765 1223455677777 8999999999999999999999988 77
Q ss_pred HHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCH
Q 013696 89 ELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKL 167 (438)
Q Consensus 89 ~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~ 167 (438)
++|++|...|++++|+.+|+++++++|+ +.+|+++|.+|..+|++++|+.+|++|++++|+++.+|+++|.++..+|++
T Consensus 82 nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~ 161 (723)
T 4gyw_A 82 NMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDW 161 (723)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccH
Confidence 9999999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCC
Q 013696 168 KESIEDSEFALRLEPQN 184 (438)
Q Consensus 168 ~eA~~~~~~al~l~P~~ 184 (438)
++|++.|++++++.|+.
T Consensus 162 ~~A~~~~~kal~l~~~~ 178 (723)
T 4gyw_A 162 TDYDERMKKLVSIVADQ 178 (723)
T ss_dssp TTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhChhH
Confidence 99999999999987654
No 16
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.72 E-value=6.4e-17 Score=136.03 Aligned_cols=108 Identities=30% Similarity=0.448 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcc-------HHHHH
Q 013696 84 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY-------IKAYS 155 (438)
Q Consensus 84 a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~-------~~a~~ 155 (438)
+.+++++|+.+++.|+|++|+.+|+++|+++|+ +.+|.++|.||..+|+|++|+.+|.+++.++|++ ..+|+
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~ 87 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMS 87 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHH
Confidence 455889999999999999999999999999999 9999999999999999999999999999998865 46899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 013696 156 RRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLA 192 (438)
Q Consensus 156 ~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~ 192 (438)
++|.++..+|++++|+.+|++++.+.|+ ++....+.
T Consensus 88 ~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~ 123 (127)
T 4gcn_A 88 RAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVK 123 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHH
Confidence 9999999999999999999999999985 55544443
No 17
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.72 E-value=8.4e-17 Score=140.27 Aligned_cols=118 Identities=32% Similarity=0.439 Sum_probs=107.6
Q ss_pred hhHHHHHHHHHHHHHhccHHHHHHHHHHHhcc------------------CCC-HHHHHHHHHHHHHhcCHHHHHHHHHH
Q 013696 82 PDATSEKELGNECFKQKKFKEAIDCYSRSIAL------------------SPT-AVAYANRAMAYLKLRRFQEAEDDCTE 142 (438)
Q Consensus 82 ~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~------------------~p~-~~~~~~la~~~~~l~~~~eA~~~~~~ 142 (438)
..+..++.+|+.+++.|+|++|+.+|.+++.+ +|. ..+|+++|.||+.+|+|++|+.+|++
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 34566899999999999999999999999999 666 78999999999999999999999999
Q ss_pred HhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-HHHHHHHHHHHHHH
Q 013696 143 ALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQ-EIKKQLAEVKSLYE 199 (438)
Q Consensus 143 al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~-~~~~~l~~a~~~~~ 199 (438)
++.++|+++.+|+++|.+|..+|+|++|+.+|++++.++|+++ .+...+..+.....
T Consensus 89 al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~ 146 (162)
T 3rkv_A 89 VLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRA 146 (162)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 56666666665443
No 18
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.72 E-value=3.7e-17 Score=139.68 Aligned_cols=129 Identities=15% Similarity=0.081 Sum_probs=115.5
Q ss_pred HHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcC
Q 013696 69 SHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLD 147 (438)
Q Consensus 69 ~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~ 147 (438)
..|.+++.++|++..+ ++.+|..++..|+|++|+.+|.+++.++|. +.+|+++|.+|..+|+|++|+.+|++++.++
T Consensus 5 ~~l~~al~~~p~~~~~--~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 82 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQ--LYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMD 82 (142)
T ss_dssp ----CCTTCCHHHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHcCCHHHHHH--HHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 4678888889887777 779999999999999999999999999998 9999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 013696 148 DRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 199 (438)
Q Consensus 148 p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 199 (438)
|+++.+++.+|.++..+|++++|+.+|++++.++|+++........+...+.
T Consensus 83 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~ 134 (142)
T 2xcb_A 83 INEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLE 134 (142)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998877665566655544
No 19
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.71 E-value=1.8e-16 Score=131.91 Aligned_cols=113 Identities=29% Similarity=0.476 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHH
Q 013696 84 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 162 (438)
Q Consensus 84 a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~ 162 (438)
+..++.+|..++..|+|++|+.+|.+++.++|. +.+|+++|.||..+|+|++|+.+|++++.++|+++.+|+++|.++.
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQI 83 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 344889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhhC------CCCHHHHHHHHHHHH
Q 013696 163 ELGKLKESIEDSEFALRLE------PQNQEIKKQLAEVKS 196 (438)
Q Consensus 163 ~lg~~~eA~~~~~~al~l~------P~~~~~~~~l~~a~~ 196 (438)
.+|++++|+.+|++++.++ |.+..++..+..+..
T Consensus 84 ~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~ 123 (126)
T 3upv_A 84 AVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQ 123 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHH
Confidence 9999999999999999999 999888877776654
No 20
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.70 E-value=7.3e-17 Score=159.97 Aligned_cols=186 Identities=17% Similarity=0.145 Sum_probs=118.0
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHH
Q 013696 11 DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKE 89 (438)
Q Consensus 11 ~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~ 89 (438)
.+...+...++|++++....+.+...+.. ......+|..| ..|++++|+..|.+++..+|++..+ +..
T Consensus 106 ~l~~~~~~~g~~~~A~~~~~~al~~~p~~---------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~ 174 (388)
T 1w3b_A 106 NLAAALVAAGDMEGAVQAYVSALQYNPDL---------YCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVA--WSN 174 (388)
T ss_dssp HHHHHHHHHSCSSHHHHHHHHHHHHCTTC---------THHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHH--HHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCc---------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH--HHH
Confidence 34555566667777777666666554311 11222344444 5566777777777777666666555 556
Q ss_pred HHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHH
Q 013696 90 LGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLK 168 (438)
Q Consensus 90 ~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~ 168 (438)
+|.++...|++++|+.+|++++.++|+ ..+|.++|.++...|++++|+..|.+++.++|+++.+++.+|.++...|+++
T Consensus 175 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~ 254 (388)
T 1w3b_A 175 LGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLID 254 (388)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHH
Confidence 677777777777777777777777666 6666667777777777777777777777777766666667777777777777
Q ss_pred HHHHHHHHHHhhCCCCHHH----------HHHHHHHHHHHHHHHhhchh
Q 013696 169 ESIEDSEFALRLEPQNQEI----------KKQLAEVKSLYEKEVFQKAS 207 (438)
Q Consensus 169 eA~~~~~~al~l~P~~~~~----------~~~l~~a~~~~~ka~~~~~~ 207 (438)
+|+..|++++.++|+++.+ .+++.+|...|.+++...+.
T Consensus 255 ~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 303 (388)
T 1w3b_A 255 LAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT 303 (388)
T ss_dssp HHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc
Confidence 7777777777766666554 23455666666666655443
No 21
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.70 E-value=7.2e-17 Score=149.24 Aligned_cols=186 Identities=16% Similarity=0.203 Sum_probs=157.0
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCCh-----h
Q 013696 10 LDFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTP-----D 83 (438)
Q Consensus 10 ~~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~-----~ 83 (438)
-.++..+-..++|++++....+.+... .. ...+..+|.+| ..|++++|+..|.+++...|... .
T Consensus 9 ~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~---------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 78 (258)
T 3uq3_A 9 KAEGNKFYKARQFDEAIEHYNKAWELH-KD---------ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVI 78 (258)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHS-CC---------THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhh-cc---------HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHH
Confidence 345667777889999999888887654 11 12344456666 88999999999999999887652 0
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHhc--------------------------cCCC-HHHHHHHHHHHHHhcCHHHH
Q 013696 84 ATSEKELGNECFKQKKFKEAIDCYSRSIA--------------------------LSPT-AVAYANRAMAYLKLRRFQEA 136 (438)
Q Consensus 84 a~~~~~~g~~~~~~g~y~~Ai~~y~~al~--------------------------~~p~-~~~~~~la~~~~~l~~~~eA 136 (438)
+..+..+|.++...|++++|+.+|.+++. .+|. +.++.++|.++...|++++|
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 158 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNA 158 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHH
Confidence 34478999999999999999999999999 5666 78899999999999999999
Q ss_pred HHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH----------HHHHHHHHHHHHHHHhhc
Q 013696 137 EDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 137 ~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~~a~~~~~ka~~~~ 205 (438)
+..|++++.++|.++.+++.+|.++..+|++++|+.+|++++.++|++..+ .+++.+|...|.+++.+.
T Consensus 159 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 159 VKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999877 355667777788777766
No 22
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.69 E-value=1.2e-16 Score=158.46 Aligned_cols=187 Identities=24% Similarity=0.261 Sum_probs=128.8
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHH
Q 013696 10 LDFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEK 88 (438)
Q Consensus 10 ~~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~ 88 (438)
..+...+..+++|++++....+.+...+ .....+..+|..| ..|++++|+..|++++..+|++..+ +.
T Consensus 139 ~~l~~~~~~~g~~~~A~~~~~~al~~~p---------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~ 207 (388)
T 1w3b_A 139 SDLGNLLKALGRLEEAKACYLKAIETQP---------NFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA--YI 207 (388)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHH--HH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCC---------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHH--HH
Confidence 3456677777888888887777776543 1112233445555 6677777777777777777776666 55
Q ss_pred HHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCH
Q 013696 89 ELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKL 167 (438)
Q Consensus 89 ~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~ 167 (438)
.+|.++...|++++|+..|.+++.++|+ +.++.++|.+|...|++++|+..|++++.++|+++.+|+.+|.++...|++
T Consensus 208 ~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 287 (388)
T 1w3b_A 208 NLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSV 287 (388)
T ss_dssp HHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Confidence 7777777777777777777777777776 677777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHHHhhCCCCHHHH----------HHHHHHHHHHHHHHhhchh
Q 013696 168 KESIEDSEFALRLEPQNQEIK----------KQLAEVKSLYEKEVFQKAS 207 (438)
Q Consensus 168 ~eA~~~~~~al~l~P~~~~~~----------~~l~~a~~~~~ka~~~~~~ 207 (438)
++|+..|++++.++|.+..++ +++.+|...|++++...+.
T Consensus 288 ~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 337 (388)
T 1w3b_A 288 AEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 337 (388)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTT
T ss_pred HHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 777777777777777776552 3455666666666665543
No 23
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.69 E-value=6.7e-17 Score=166.36 Aligned_cols=169 Identities=15% Similarity=0.074 Sum_probs=124.1
Q ss_pred hHHHH-HHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHH
Q 013696 18 DLQDW-DLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECF 95 (438)
Q Consensus 18 ~l~~w-e~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~ 95 (438)
.+++| ++++....+.++..+ .....+..+|.+| ..|++++|+.+|++++.++|+ ..+ +..+|.+|.
T Consensus 114 ~~g~~~~~A~~~~~~al~~~p---------~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~--~~~lg~~~~ 181 (474)
T 4abn_A 114 VTPDYSPEAEVLLSKAVKLEP---------ELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVS--LQNLSMVLR 181 (474)
T ss_dssp SSSSCCHHHHHHHHHHHHHCT---------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHH--HHHHHHHHT
T ss_pred hccccHHHHHHHHHHHHhhCC---------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHH--HHHHHHHHH
Confidence 34456 666666666665543 1122344455555 677888888888888888776 333 668888888
Q ss_pred Hh---------ccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHh--------cCHHHHHHHHHHHhhcCC---ccHHHH
Q 013696 96 KQ---------KKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL--------RRFQEAEDDCTEALNLDD---RYIKAY 154 (438)
Q Consensus 96 ~~---------g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l--------~~~~eA~~~~~~al~l~p---~~~~a~ 154 (438)
.. |+|++|+.+|.++++++|+ +.+|+++|.+|..+ |++++|+.+|++++.++| +++.+|
T Consensus 182 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 261 (474)
T 4abn_A 182 QLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLH 261 (474)
T ss_dssp TCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHH
T ss_pred HhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHH
Confidence 88 8888888888888888887 77888888888888 888888888888888888 788888
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 013696 155 SRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLY 198 (438)
Q Consensus 155 ~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~ 198 (438)
+++|.+|..+|++++|+.+|+++++++|++..++..+..+...+
T Consensus 262 ~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~l 305 (474)
T 4abn_A 262 LNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFL 305 (474)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 88888888888888888888888888888877765555554433
No 24
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.69 E-value=6.6e-17 Score=166.39 Aligned_cols=156 Identities=13% Similarity=0.140 Sum_probs=143.7
Q ss_pred CCCCCCcC-cCCCc-cchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCCHHHHHHHHHHHHH
Q 013696 52 KKPSPSGN-SYSRN-YDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLK 129 (438)
Q Consensus 52 ~~~~~~~y-~~g~~-~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~~~~~~~la~~~~~ 129 (438)
+...|..| ..|++ ++|+.+|++++.++|++..+ ++.+|.+|+..|+|++|+.+|.++++++|+..++.++|.+|..
T Consensus 105 ~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a--~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~lg~~~~~ 182 (474)
T 4abn_A 105 LMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEA--WNQLGEVYWKKGDVTSAHTCFSGALTHCKNKVSLQNLSMVLRQ 182 (474)
T ss_dssp HHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHTTCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCHHHHHHHHHHHHH
Confidence 34455555 88999 99999999999999999888 7799999999999999999999999999999999999999999
Q ss_pred h---------cCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHhhCC---CCHHH--
Q 013696 130 L---------RRFQEAEDDCTEALNLDDRYIKAYSRRATARKEL--------GKLKESIEDSEFALRLEP---QNQEI-- 187 (438)
Q Consensus 130 l---------~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~l--------g~~~eA~~~~~~al~l~P---~~~~~-- 187 (438)
+ |++++|+..|++++.++|+++.+|+++|.+|..+ |++++|+.+|+++++++| .++.+
T Consensus 183 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 262 (474)
T 4abn_A 183 LQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHL 262 (474)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHH
T ss_pred hccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHH
Confidence 9 9999999999999999999999999999999999 999999999999999999 88876
Q ss_pred --------HHHHHHHHHHHHHHHhhchhhh
Q 013696 188 --------KKQLAEVKSLYEKEVFQKASKT 209 (438)
Q Consensus 188 --------~~~l~~a~~~~~ka~~~~~~~~ 209 (438)
.+++.+|...|.+++.+.+...
T Consensus 263 ~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 292 (474)
T 4abn_A 263 NRATLHKYEESYGEALEGFSQAAALDPAWP 292 (474)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 4667889999999988876654
No 25
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.68 E-value=2.1e-16 Score=155.20 Aligned_cols=184 Identities=11% Similarity=0.036 Sum_probs=125.5
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHH
Q 013696 11 DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKE 89 (438)
Q Consensus 11 ~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~ 89 (438)
.+...+...++|++++....+.+...+. ....+..+|..| ..|++++|+..|++++.++|++..+ +..
T Consensus 70 ~~~~~~~~~g~~~~A~~~~~~al~~~p~---------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~ 138 (365)
T 4eqf_A 70 EEGLKRLKEGDLPVTILFMEAAILQDPG---------DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKA--LMA 138 (365)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCcC---------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHH--HHH
Confidence 4456666677888888888887766541 122344555566 7788888888888888888887776 668
Q ss_pred HHHHHHHhccHHHHHHHHHHHhccCCC-----------------------------------------------HHHHHH
Q 013696 90 LGNECFKQKKFKEAIDCYSRSIALSPT-----------------------------------------------AVAYAN 122 (438)
Q Consensus 90 ~g~~~~~~g~y~~Ai~~y~~al~~~p~-----------------------------------------------~~~~~~ 122 (438)
+|.+|...|+|++|+.+|.+++.++|. +.++.+
T Consensus 139 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 218 (365)
T 4eqf_A 139 LAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTG 218 (365)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHH
T ss_pred HHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHH
Confidence 888888888888888777777776654 345666
Q ss_pred HHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH----------HHHHH
Q 013696 123 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLA 192 (438)
Q Consensus 123 la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~ 192 (438)
+|.+|..+|++++|+..|++++.++|+++.+|+.+|.++..+|++++|+..|++++.++|++..+ .+++.
T Consensus 219 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~ 298 (365)
T 4eqf_A 219 LGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYR 298 (365)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHH
Confidence 66667677777777777777777777666677777777777777777777777777777666555 23334
Q ss_pred HHHHHHHHHHhhc
Q 013696 193 EVKSLYEKEVFQK 205 (438)
Q Consensus 193 ~a~~~~~ka~~~~ 205 (438)
+|...|.+++.+.
T Consensus 299 ~A~~~~~~al~~~ 311 (365)
T 4eqf_A 299 EAVSNFLTALSLQ 311 (365)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC
Confidence 5555555555443
No 26
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.68 E-value=2.4e-16 Score=143.69 Aligned_cols=147 Identities=12% Similarity=0.028 Sum_probs=122.2
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHH----------------HHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKE----------------LGNECFKQKKFKEAIDCYSRSIALSPT-AVAYAN 122 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~----------------~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~ 122 (438)
..|++++|+..|++++..+|+++.+ ++. +|.+|...|+|++|+.+|.++++++|+ +.++++
T Consensus 16 ~~g~~~~A~~~~~~al~~~p~~~~~--~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 93 (208)
T 3urz_A 16 EAGQNGQAVSYFRQTIALNIDRTEM--YYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEA 93 (208)
T ss_dssp HTTCHHHHHHHHHHHHHHCHHHHHH--HHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhCCCChHH--HHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 7799999999999999999998887 557 999999999999999999999999999 999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCC--HHHHHHHHHHHHhhCCCCHH---------HHHHH
Q 013696 123 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGK--LKESIEDSEFALRLEPQNQE---------IKKQL 191 (438)
Q Consensus 123 la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~--~~eA~~~~~~al~l~P~~~~---------~~~~l 191 (438)
+|.+|..+|++++|+.+|++++.++|+++.+|+++|.+|...|+ ...+...|.+++...|.... ..+++
T Consensus 94 lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~ 173 (208)
T 3urz_A 94 CAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRY 173 (208)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCH
Confidence 99999999999999999999999999999999999999877654 34566667666544332211 13456
Q ss_pred HHHHHHHHHHHhhchhh
Q 013696 192 AEVKSLYEKEVFQKASK 208 (438)
Q Consensus 192 ~~a~~~~~ka~~~~~~~ 208 (438)
.+|...|++++.+.+..
T Consensus 174 ~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 174 EKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHHHHHHTTTSCCH
T ss_pred HHHHHHHHHHHHhCCCH
Confidence 77888888888777654
No 27
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.67 E-value=1.2e-16 Score=146.71 Aligned_cols=182 Identities=13% Similarity=0.095 Sum_probs=111.3
Q ss_pred HHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHH
Q 013696 15 FLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNE 93 (438)
Q Consensus 15 ~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~ 93 (438)
.+...++|++++....+.+...+ .....+..+|..| ..|++++|+..|.+++..+|.+..+ +..+|.+
T Consensus 32 ~~~~~~~~~~A~~~~~~~l~~~~---------~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~la~~ 100 (243)
T 2q7f_A 32 RGSEFGDYEKAAEAFTKAIEENK---------EDAIPYINFANLLSSVNELERALAFYDKALELDSSAATA--YYGAGNV 100 (243)
T ss_dssp ----------CCTTHHHHHTTCT---------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHH
T ss_pred HHHHhhCHHHHHHHHHHHHHhCc---------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHH--HHHHHHH
Confidence 33444556666555555554332 1111223334444 6677777777777777777666555 5577777
Q ss_pred HHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHH
Q 013696 94 CFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIE 172 (438)
Q Consensus 94 ~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~ 172 (438)
+...|++++|+.+|.++++.+|. ..++.++|.+|...|++++|+..+.+++.++|+++.+++.+|.++...|++++|+.
T Consensus 101 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 180 (243)
T 2q7f_A 101 YVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALS 180 (243)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHH
Confidence 77777777777777777777776 66777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHhhCCCCHHHH----------HHHHHHHHHHHHHHhhchh
Q 013696 173 DSEFALRLEPQNQEIK----------KQLAEVKSLYEKEVFQKAS 207 (438)
Q Consensus 173 ~~~~al~l~P~~~~~~----------~~l~~a~~~~~ka~~~~~~ 207 (438)
.|++++.++|.+..++ +++.+|...|.+++...+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~ 225 (243)
T 2q7f_A 181 QFAAVTEQDPGHADAFYNAGVTYAYKENREKALEMLDKAIDIQPD 225 (243)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCTT
T ss_pred HHHHHHHhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHccCcc
Confidence 7777777777766553 2334555555555555433
No 28
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.67 E-value=1.5e-16 Score=156.30 Aligned_cols=136 Identities=26% Similarity=0.310 Sum_probs=124.8
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-H---------------HHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-A---------------VAYANR 123 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~---------------~~~~~l 123 (438)
.++++++|+..|..++...|....+ ++.+|++|+..|+|++|+.+|.+++.++|. . .+|+++
T Consensus 125 ~L~~~~~A~~~~~~a~~~~p~~a~~--~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nl 202 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEEKLEQSTI--VKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNL 202 (336)
T ss_dssp EEEEEECCCCGGGCCHHHHHHHHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred EEeecccccchhcCCHHHHHHHHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHH
Confidence 5678999999999999888776666 779999999999999999999999999998 3 889999
Q ss_pred HHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 013696 124 AMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSL 197 (438)
Q Consensus 124 a~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~ 197 (438)
|.||+.+|+|++|+.+|++++.++|+++.+|+++|.+|..+|++++|+.+|+++++++|++..++..+..+...
T Consensus 203 a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~ 276 (336)
T 1p5q_A 203 AMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQR 276 (336)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999886666555543
No 29
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.67 E-value=4.5e-16 Score=144.30 Aligned_cols=184 Identities=11% Similarity=0.008 Sum_probs=148.4
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHH
Q 013696 13 QGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELG 91 (438)
Q Consensus 13 ~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g 91 (438)
...+...++|++++....+.+...+. ....+..+|..| ..|++++|+..|.+++..+|.+..+ +..+|
T Consensus 44 a~~~~~~~~~~~A~~~~~~al~~~~~---------~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~--~~~la 112 (252)
T 2ho1_A 44 GLGYLQRGNTEQAKVPLRKALEIDPS---------SADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARV--LNNYG 112 (252)
T ss_dssp HHHHHHTTCTGGGHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHhcCCC---------hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHH--HHHHH
Confidence 34455566777777777777765431 112333445555 7899999999999999999888777 67999
Q ss_pred HHHHHhccHHHHHHHHHHHhc--cCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHH
Q 013696 92 NECFKQKKFKEAIDCYSRSIA--LSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLK 168 (438)
Q Consensus 92 ~~~~~~g~y~~Ai~~y~~al~--~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~ 168 (438)
.+++..|++++|+.+|.+++. ..|. ..++.++|.+|...|++++|+..+.+++.++|.++.+++.+|.++..+|+++
T Consensus 113 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 192 (252)
T 2ho1_A 113 GFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYV 192 (252)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHH
Confidence 999999999999999999999 7777 8889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCHHH----------HHHHHHHHHHHHHHHhhchh
Q 013696 169 ESIEDSEFALRLEPQNQEI----------KKQLAEVKSLYEKEVFQKAS 207 (438)
Q Consensus 169 eA~~~~~~al~l~P~~~~~----------~~~l~~a~~~~~ka~~~~~~ 207 (438)
+|+..|++++.+.|.+..+ .+++.+|...+.+++...+.
T Consensus 193 ~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~p~ 241 (252)
T 2ho1_A 193 PARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPG 241 (252)
T ss_dssp HHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCcCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC
Confidence 9999999999999988766 34455666666666665543
No 30
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.67 E-value=2.1e-16 Score=146.05 Aligned_cols=179 Identities=19% Similarity=0.298 Sum_probs=147.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhc--------------
Q 013696 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLM-------------- 76 (438)
Q Consensus 12 l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~-------------- 76 (438)
+...+..+++|++++....+.+...+.... ..+.....+..+|..| ..|++++|+..|.+++.
T Consensus 44 ~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 121 (258)
T 3uq3_A 44 RAAAEYEKGEYETAISTLNDAVEQGREMRA--DYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNA 121 (258)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHhCccccc--chHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHH
Confidence 455666677888888888877765531110 0001123345566666 88999999999999999
Q ss_pred ------------CCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 013696 77 ------------NEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEA 143 (438)
Q Consensus 77 ------------~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~a 143 (438)
.+|....+ +..+|.+++..|+|++|+.+|.+++..+|. +.++.++|.+|..+|++++|+.+|.++
T Consensus 122 ~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 199 (258)
T 3uq3_A 122 EKELKKAEAEAYVNPEKAEE--ARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKA 199 (258)
T ss_dssp HHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcchHHH--HHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 44444444 779999999999999999999999999999 999999999999999999999999999
Q ss_pred hhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC------CCCHHHHHHHHHH
Q 013696 144 LNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLE------PQNQEIKKQLAEV 194 (438)
Q Consensus 144 l~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~------P~~~~~~~~l~~a 194 (438)
+.++|+++.+|+.+|.++..+|++++|+.+|+++++++ |.+..++..+.++
T Consensus 200 l~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 200 IEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 99999999999999999999999999999999999999 9888877766654
No 31
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.66 E-value=1e-15 Score=143.72 Aligned_cols=152 Identities=14% Similarity=0.097 Sum_probs=132.9
Q ss_pred CCCcC-cCCCccchHHHHHhhhcCCCCC---hhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC----HHHHHHHHHH
Q 013696 55 SPSGN-SYSRNYDPVSHISSSLMNEEST---PDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANRAMA 126 (438)
Q Consensus 55 ~~~~y-~~g~~~eAi~~~~~al~~~p~~---~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~----~~~~~~la~~ 126 (438)
.|..| ..|++++|+..|++++...|.+ ..+ ++.+|.+|+..|+|++|+..|.+++.++|+ +.+++++|.|
T Consensus 21 ~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a--~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~ 98 (261)
T 3qky_A 21 RAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADA--QFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMC 98 (261)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHH--HHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHH
Confidence 34444 8899999999999999999988 455 789999999999999999999999999885 7889999999
Q ss_pred HHH--------hcCHHHHHHHHHHHhhcCCccHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 013696 127 YLK--------LRRFQEAEDDCTEALNLDDRYIKAY-----------------SRRATARKELGKLKESIEDSEFALRLE 181 (438)
Q Consensus 127 ~~~--------l~~~~eA~~~~~~al~l~p~~~~a~-----------------~~lg~a~~~lg~~~eA~~~~~~al~l~ 181 (438)
|.. +|++++|+..|++++..+|++..++ +.+|.+|..+|+|++|+..|++++..+
T Consensus 99 ~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~ 178 (261)
T 3qky_A 99 YYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAY 178 (261)
T ss_dssp HHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC
Confidence 999 9999999999999999999886655 899999999999999999999999999
Q ss_pred CCCH---HH----------H----------HHHHHHHHHHHHHHhhchhh
Q 013696 182 PQNQ---EI----------K----------KQLAEVKSLYEKEVFQKASK 208 (438)
Q Consensus 182 P~~~---~~----------~----------~~l~~a~~~~~ka~~~~~~~ 208 (438)
|++. .+ . +++.+|...|.+++...+..
T Consensus 179 p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 228 (261)
T 3qky_A 179 PDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDS 228 (261)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCC
Confidence 9853 33 1 66677888888887776544
No 32
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.66 E-value=1.7e-15 Score=132.22 Aligned_cols=106 Identities=28% Similarity=0.446 Sum_probs=101.5
Q ss_pred hhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHH
Q 013696 82 PDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATA 160 (438)
Q Consensus 82 ~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a 160 (438)
..+..++.+|.+++..|+|++|+.+|.+++.++|. +.+|+++|.||..+|+|++|+.+|++++.++|+++.+|+++|.+
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 88 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLA 88 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 34555889999999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhhCCCCHHH
Q 013696 161 RKELGKLKESIEDSEFALRLEPQNQEI 187 (438)
Q Consensus 161 ~~~lg~~~eA~~~~~~al~l~P~~~~~ 187 (438)
|..+|++++|+.+|++++.++|++..+
T Consensus 89 ~~~~g~~~~A~~~~~~al~~~p~~~~~ 115 (164)
T 3sz7_A 89 RFDMADYKGAKEAYEKGIEAEGNGGSD 115 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHSSSCCH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCchHH
Confidence 999999999999999999999999874
No 33
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.66 E-value=3.3e-16 Score=153.72 Aligned_cols=173 Identities=14% Similarity=0.128 Sum_probs=135.1
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccc-cccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHH
Q 013696 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLV-SSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKE 89 (438)
Q Consensus 12 l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~ 89 (438)
+...+..++++++++....+.+...+....... ..+.......+|..| ..|++++|+..|++++..+|....+..+..
T Consensus 139 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 218 (365)
T 4eqf_A 139 LAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTG 218 (365)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHH
T ss_pred HHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHH
Confidence 445555666777777776666654431000000 001112234457777 889999999999999999998333334789
Q ss_pred HHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHH
Q 013696 90 LGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLK 168 (438)
Q Consensus 90 ~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~ 168 (438)
+|.+|...|++++|+.+|.+++.++|. +.+|.++|.+|..+|++++|+..|++++.++|+++.+|+.+|.++..+|+++
T Consensus 219 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~ 298 (365)
T 4eqf_A 219 LGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYR 298 (365)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCC
Q 013696 169 ESIEDSEFALRLEPQN 184 (438)
Q Consensus 169 eA~~~~~~al~l~P~~ 184 (438)
+|+.+|++++.++|++
T Consensus 299 ~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 299 EAVSNFLTALSLQRKS 314 (365)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhCccc
Confidence 9999999999999885
No 34
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.66 E-value=1.3e-15 Score=134.36 Aligned_cols=127 Identities=17% Similarity=0.173 Sum_probs=116.7
Q ss_pred CcCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHH-HHHhcCH--H
Q 013696 59 NSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMA-YLKLRRF--Q 134 (438)
Q Consensus 59 y~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~-~~~l~~~--~ 134 (438)
+..|++++|+..|.+++..+|.+..+ +..+|.+|+..|+|++|+.+|.+++.++|. +.++.++|.+ |...|++ +
T Consensus 21 ~~~~~~~~A~~~~~~al~~~p~~~~~--~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~ 98 (177)
T 2e2e_A 21 ASQQNPEAQLQALQDKIRANPQNSEQ--WALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTA 98 (177)
T ss_dssp C-----CCCCHHHHHHHHHCCSCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCH
T ss_pred hhccCHHHHHHHHHHHHHhCCCcHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchH
Confidence 38899999999999999999998887 779999999999999999999999999998 9999999999 8899999 9
Q ss_pred HHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH
Q 013696 135 EAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI 187 (438)
Q Consensus 135 eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~ 187 (438)
+|+..|.+++.++|+++.+++.+|.++..+|++++|+..|++++.++|++...
T Consensus 99 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 151 (177)
T 2e2e_A 99 QTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINR 151 (177)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccH
Confidence 99999999999999999999999999999999999999999999999988644
No 35
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.66 E-value=5.4e-16 Score=145.65 Aligned_cols=171 Identities=13% Similarity=0.073 Sum_probs=143.3
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChh-HHHHHHH
Q 013696 13 QGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPD-ATSEKEL 90 (438)
Q Consensus 13 ~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~-a~~~~~~ 90 (438)
+..+-..++|++++....+.+...+.. +.....+..+|.+| ..|++++|+..|++++...|+++. ..+++.+
T Consensus 22 a~~~~~~g~~~~A~~~~~~~l~~~p~~------~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l 95 (261)
T 3qky_A 22 AMEFYNQGKYDRAIEYFKAVFTYGRTH------EWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYER 95 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHHHGGGCSCS------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhCCCC------cchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHH
Confidence 444556789999999999988766411 11123345566666 899999999999999999886643 4458899
Q ss_pred HHHHHH--------hccHHHHHHHHHHHhccCCC-HH---HH--------------HHHHHHHHHhcCHHHHHHHHHHHh
Q 013696 91 GNECFK--------QKKFKEAIDCYSRSIALSPT-AV---AY--------------ANRAMAYLKLRRFQEAEDDCTEAL 144 (438)
Q Consensus 91 g~~~~~--------~g~y~~Ai~~y~~al~~~p~-~~---~~--------------~~la~~~~~l~~~~eA~~~~~~al 144 (438)
|.+++. .|++++|+..|.+++..+|+ .. ++ +++|.+|..+|+|++|+..|++++
T Consensus 96 g~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l 175 (261)
T 3qky_A 96 AMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVF 175 (261)
T ss_dssp HHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 999999 99999999999999999997 33 33 899999999999999999999999
Q ss_pred hcCCc---cHHHHHHHHHHHHHc----------CCHHHHHHHHHHHHhhCCCCHHHHH
Q 013696 145 NLDDR---YIKAYSRRATARKEL----------GKLKESIEDSEFALRLEPQNQEIKK 189 (438)
Q Consensus 145 ~l~p~---~~~a~~~lg~a~~~l----------g~~~eA~~~~~~al~l~P~~~~~~~ 189 (438)
...|+ .+.+++.+|.+|..+ |++++|+..|++++...|+++.+..
T Consensus 176 ~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~ 233 (261)
T 3qky_A 176 DAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLRT 233 (261)
T ss_dssp HHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHHH
T ss_pred HHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCChHHHH
Confidence 99998 578999999999988 9999999999999999999976543
No 36
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.66 E-value=1e-15 Score=138.45 Aligned_cols=167 Identities=13% Similarity=0.075 Sum_probs=143.4
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHH
Q 013696 11 DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKE 89 (438)
Q Consensus 11 ~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~ 89 (438)
.+...+...++|++++....+.+...+. ....+..+|..| ..|++++|+..|.+++..+|.+..+ +..
T Consensus 13 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~---------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~--~~~ 81 (225)
T 2vq2_A 13 QLAMEYMRGQDYRQATASIEDALKSDPK---------NELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEI--NNN 81 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhCcc---------chHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHH--HHH
Confidence 3455666678888888888888776541 112334455556 7899999999999999999988777 679
Q ss_pred HHHHHHHh-ccHHHHHHHHHHHhc--cCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcC
Q 013696 90 LGNECFKQ-KKFKEAIDCYSRSIA--LSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG 165 (438)
Q Consensus 90 ~g~~~~~~-g~y~~Ai~~y~~al~--~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg 165 (438)
+|.+++.. |++++|+.+|.+++. .+|. ..++.++|.++...|++++|+..+.+++..+|.++.+++.+|.++...|
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 161 (225)
T 2vq2_A 82 YGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAG 161 (225)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcC
Confidence 99999999 999999999999999 5566 8889999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhCC-CCHHHH
Q 013696 166 KLKESIEDSEFALRLEP-QNQEIK 188 (438)
Q Consensus 166 ~~~eA~~~~~~al~l~P-~~~~~~ 188 (438)
++++|+..|++++.+.| .+...+
T Consensus 162 ~~~~A~~~~~~~~~~~~~~~~~~~ 185 (225)
T 2vq2_A 162 QLGDADYYFKKYQSRVEVLQADDL 185 (225)
T ss_dssp CHHHHHHHHHHHHHHHCSCCHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCHHHH
Confidence 99999999999999999 887764
No 37
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.65 E-value=7.1e-16 Score=138.93 Aligned_cols=139 Identities=24% Similarity=0.249 Sum_probs=119.5
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-H----------------HHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-A----------------VAYAN 122 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~----------------~~~~~ 122 (438)
..|++++|.+.+.......+.. +..++.+|..++..|+|++|+.+|.+++.+.|. + .++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (198)
T 2fbn_A 16 NLYFQGAKKSIYDYTDEEKVQS--AFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLN 93 (198)
T ss_dssp ------CCCSGGGCCHHHHHHH--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred hhhhccccCchhhCCHHHHHHH--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHH
Confidence 6688888888887665544333 444889999999999999999999999999887 5 89999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 013696 123 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEK 200 (438)
Q Consensus 123 la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~k 200 (438)
+|.||..+|+|++|+.+|.+++.++|+++.+++++|.++..+|++++|+.+|++++.++|++..++..+..+.....+
T Consensus 94 la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 171 (198)
T 2fbn_A 94 LATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKE 171 (198)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998888877776554
No 38
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.65 E-value=1.9e-15 Score=138.68 Aligned_cols=153 Identities=15% Similarity=0.165 Sum_probs=124.8
Q ss_pred cCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHH
Q 013696 51 AKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYL 128 (438)
Q Consensus 51 ~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~ 128 (438)
.+...|..| ..|++++|+..|++++..+|.+..+ +..+|.+++..|++++|+.+|.+++..+|. ..++.++|.+|.
T Consensus 25 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~~~~--~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 102 (243)
T 2q7f_A 25 TGGQQMGRGSEFGDYEKAAEAFTKAIEENKEDAIP--YINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYV 102 (243)
T ss_dssp -----------------CCTTHHHHHTTCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhCcccHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHH
Confidence 345566666 8899999999999999999998877 779999999999999999999999999998 999999999999
Q ss_pred HhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH----------HHHHHHHHHH
Q 013696 129 KLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK----------KQLAEVKSLY 198 (438)
Q Consensus 129 ~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~----------~~l~~a~~~~ 198 (438)
.+|++++|+..+.+++.++|.++.+++.+|.++...|++++|+..|++++.+.|.+..++ +++.+|...+
T Consensus 103 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 182 (243)
T 2q7f_A 103 VKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQF 182 (243)
T ss_dssp HTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998773 3445556666
Q ss_pred HHHHhhc
Q 013696 199 EKEVFQK 205 (438)
Q Consensus 199 ~ka~~~~ 205 (438)
.+++...
T Consensus 183 ~~~~~~~ 189 (243)
T 2q7f_A 183 AAVTEQD 189 (243)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 6555544
No 39
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.65 E-value=1.2e-15 Score=149.06 Aligned_cols=184 Identities=10% Similarity=0.025 Sum_probs=113.2
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHH
Q 013696 11 DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKE 89 (438)
Q Consensus 11 ~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~ 89 (438)
.+...+-..++|++++....+.+...+. ....+..+|.+| ..|++++|+..|.+++..+|.+..+ +..
T Consensus 69 ~~~~~~~~~g~~~~A~~~~~~al~~~p~---------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~--~~~ 137 (368)
T 1fch_A 69 EEGLRRLQEGDLPNAVLLFEAAVQQDPK---------HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTA--LMA 137 (368)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHSCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCCC---------CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHH--HHH
Confidence 3445555566666666666666654321 111223344444 6667777777777777776666655 456
Q ss_pred HHHHHHHhccHHHHHHHHHHHhccCCC----------------------------------------------------H
Q 013696 90 LGNECFKQKKFKEAIDCYSRSIALSPT----------------------------------------------------A 117 (438)
Q Consensus 90 ~g~~~~~~g~y~~Ai~~y~~al~~~p~----------------------------------------------------~ 117 (438)
+|.++...|++++|+.+|.+++.++|. +
T Consensus 138 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 217 (368)
T 1fch_A 138 LAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDP 217 (368)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccH
Confidence 666666666666666666655555442 3
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH----------
Q 013696 118 VAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI---------- 187 (438)
Q Consensus 118 ~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~---------- 187 (438)
.++.++|.+|...|++++|+..|.+++.++|+++.+|+.+|.++..+|++++|+..|++++.++|++..+
T Consensus 218 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 297 (368)
T 1fch_A 218 DVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCIN 297 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 4566667777777777777777777777777777777777777777777777777777777777766655
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 013696 188 KKQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 188 ~~~l~~a~~~~~ka~~~~ 205 (438)
.+++.+|...|.+++...
T Consensus 298 ~g~~~~A~~~~~~al~~~ 315 (368)
T 1fch_A 298 LGAHREAVEHFLEALNMQ 315 (368)
T ss_dssp HTCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhC
Confidence 334445555555555443
No 40
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.65 E-value=4.1e-15 Score=129.82 Aligned_cols=144 Identities=17% Similarity=0.210 Sum_probs=131.1
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~ 138 (438)
..|++++|+..|++++...|.+..+ +..+|.+++..|++++|+.+|.+++..+|. ..++.++|.++...|++++|+.
T Consensus 20 ~~~~~~~A~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 97 (186)
T 3as5_A 20 KAGRYSQAVMLLEQVYDADAFDVDV--ALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVP 97 (186)
T ss_dssp HHTCHHHHHHHHTTTCCTTSCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCccChHH--HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHH
Confidence 6789999999999999999988777 779999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH----------HHHHHHHHHHHHHHhhc
Q 013696 139 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK----------KQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 139 ~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~----------~~l~~a~~~~~ka~~~~ 205 (438)
.+.+++..+|.++.+++.+|.++...|++++|+..|++++.+.|.+..++ +++.+|...+.+++...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 98 LLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKANELD 174 (186)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999998763 44566666666666554
No 41
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.64 E-value=2.2e-15 Score=145.81 Aligned_cols=139 Identities=19% Similarity=0.250 Sum_probs=67.4
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHH----------HHHHHHHHHhccHHHHHHHHHHHhccCCC-H----HHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSE----------KELGNECFKQKKFKEAIDCYSRSIALSPT-A----VAYANRA 124 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~----------~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~----~~~~~la 124 (438)
..|++++|+..|.+++...|++..+..+ ..+|.+++..|++++|+.+|.+++...|. . .++..+|
T Consensus 200 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la 279 (359)
T 3ieg_A 200 QLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERIC 279 (359)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 3444444444444444444444433211 12244445555555555555555554444 1 2344455
Q ss_pred HHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 013696 125 MAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLY 198 (438)
Q Consensus 125 ~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~ 198 (438)
.+|..+|++++|+..|++++.++|+++.+|+.+|.++..+|++++|+.+|+++++++|++..++..+..+...+
T Consensus 280 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~ 353 (359)
T 3ieg_A 280 HCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLL 353 (359)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Confidence 55555555555555555555555555555555555555555555555555555555555555544444444433
No 42
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.64 E-value=8.6e-16 Score=147.29 Aligned_cols=185 Identities=12% Similarity=0.069 Sum_probs=121.9
Q ss_pred HHHHHHhHH-HHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHH
Q 013696 12 FQGFLNDLQ-DWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKE 89 (438)
Q Consensus 12 l~~~~~~l~-~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~ 89 (438)
+...+...+ .|++++....+.+...+. ....+..+|..| ..|++++|+..|.+++...|....+ +..
T Consensus 96 l~~~~~~~~~~~~~A~~~~~~a~~~~~~---------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~--~~~ 164 (330)
T 3hym_B 96 VGCYYLMVGHKNEHARRYLSKATTLEKT---------YGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLP--MLY 164 (330)
T ss_dssp HHHHHHHSCSCHHHHHHHHHHHHTTCTT---------CTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHH--HHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHhCCc---------cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHH--HHH
Confidence 445555556 677777766666655431 111233444455 6677777777777777777766666 446
Q ss_pred HHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcC---------CccHHHHHHHHH
Q 013696 90 LGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLD---------DRYIKAYSRRAT 159 (438)
Q Consensus 90 ~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~---------p~~~~a~~~lg~ 159 (438)
+|.++...|++++|+.+|.+++..+|. +.++.++|.+|...|++++|+..+++++.+. |.++.+++.+|.
T Consensus 165 l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~ 244 (330)
T 3hym_B 165 IGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGH 244 (330)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHH
Confidence 777777777777777777777777776 6777777777777777777777777777665 555667777777
Q ss_pred HHHHcCCHHHHHHHHHHHHhhCCCCHHH----------HHHHHHHHHHHHHHHhhchh
Q 013696 160 ARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLAEVKSLYEKEVFQKAS 207 (438)
Q Consensus 160 a~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~~a~~~~~ka~~~~~~ 207 (438)
++..+|++++|+.+|++++.++|++..+ .+++.+|...|.+++...+.
T Consensus 245 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 302 (330)
T 3hym_B 245 VCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRD 302 (330)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSC
T ss_pred HHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCC
Confidence 7777777777777777777777776554 34455666666666555543
No 43
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.64 E-value=2.6e-16 Score=161.26 Aligned_cols=138 Identities=25% Similarity=0.325 Sum_probs=122.7
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC----------------HHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----------------AVAYANR 123 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~----------------~~~~~~l 123 (438)
.++++++|+..|..++...|....+ ++.+|+.+++.|+|++|+.+|.++++++|. ..+|+++
T Consensus 246 ~l~~~~~A~~~~~~~~~~~~~~a~~--~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nl 323 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKEKLEQAAI--VKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNL 323 (457)
T ss_dssp EEEEEECCCCGGGSCHHHHHHHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccCcchhhcCHHHHHHHHHH--HHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHH
Confidence 5678889999999888887766656 889999999999999999999999999887 3889999
Q ss_pred HHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 013696 124 AMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 199 (438)
Q Consensus 124 a~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 199 (438)
|.||+++|+|++|+.+|++++.++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++..++..+..+...+.
T Consensus 324 a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~ 399 (457)
T 1kt0_A 324 AMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAK 399 (457)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998887777766554
No 44
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.64 E-value=4.4e-16 Score=130.79 Aligned_cols=107 Identities=15% Similarity=0.164 Sum_probs=100.1
Q ss_pred CCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHh
Q 013696 53 KPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL 130 (438)
Q Consensus 53 ~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l 130 (438)
...|..| ..|+|++|+..|++++.++|.+..+ +..+|.+|+..|++++|+.+|.++++++|+ +.+|+++|.+|..+
T Consensus 17 ~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~ 94 (126)
T 4gco_A 17 KNKGNEYFKKGDYPTAMRHYNEAVKRDPENAIL--YSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAM 94 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHC
Confidence 3445555 8999999999999999999999888 779999999999999999999999999999 99999999999999
Q ss_pred cCHHHHHHHHHHHhhcCCccHHHHHHHHHHH
Q 013696 131 RRFQEAEDDCTEALNLDDRYIKAYSRRATAR 161 (438)
Q Consensus 131 ~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~ 161 (438)
|++++|+.+|+++++++|++..++..++.++
T Consensus 95 ~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 95 REWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 9999999999999999999999999998764
No 45
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.64 E-value=1.8e-15 Score=145.09 Aligned_cols=180 Identities=10% Similarity=-0.027 Sum_probs=109.0
Q ss_pred HHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHH
Q 013696 14 GFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGN 92 (438)
Q Consensus 14 ~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~ 92 (438)
..+-..++|++++....+.+...+.... .+...+.++ ..|++++|+..+.+++..+|.+..+ +..+|.
T Consensus 30 ~~~~~~g~~~~A~~~~~~~l~~~p~~~~---------~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~l~~ 98 (330)
T 3hym_B 30 ERHYYNCDFKMCYKLTSVVMEKDPFHAS---------CLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVS--WFAVGC 98 (330)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCTT---------THHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHH--HHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCChh---------hHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHH--HHHHHH
Confidence 3334446777777766666655541111 111122222 5566666666666666666666655 446666
Q ss_pred HHHHhc-cHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHH
Q 013696 93 ECFKQK-KFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKES 170 (438)
Q Consensus 93 ~~~~~g-~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA 170 (438)
+++..| ++++|+.+|.+++.++|. +.+|.++|.+|...|++++|+..|.+++.++|++..+++.+|.++...|++++|
T Consensus 99 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A 178 (330)
T 3hym_B 99 YYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLA 178 (330)
T ss_dssp HHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHH
Confidence 666666 666666666666666666 666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHHHHHhhCCCCHHH----------HHHHHHHHHHHHHHHhh
Q 013696 171 IEDSEFALRLEPQNQEI----------KKQLAEVKSLYEKEVFQ 204 (438)
Q Consensus 171 ~~~~~~al~l~P~~~~~----------~~~l~~a~~~~~ka~~~ 204 (438)
+..|++++.++|.+..+ .+++.+|...+.+++..
T Consensus 179 ~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 222 (330)
T 3hym_B 179 ERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEK 222 (330)
T ss_dssp HHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 66666666666666544 23445555555555554
No 46
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.64 E-value=1.9e-15 Score=146.14 Aligned_cols=184 Identities=14% Similarity=0.058 Sum_probs=154.5
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHH
Q 013696 11 DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKE 89 (438)
Q Consensus 11 ~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~ 89 (438)
.++..+-..++|++++....+.+...+. ....+..+|.+| ..|++++|+..|++++..+|.+..+ +..
T Consensus 8 ~~~~~~~~~g~~~~A~~~~~~~l~~~p~---------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~ 76 (359)
T 3ieg_A 8 ELGKKLLAAGQLADALSQFHAAVDGDPD---------NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAA--RLQ 76 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH--HHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCcc---------cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchH--HHH
Confidence 4456666778899999988888876541 122344455566 8899999999999999999998877 779
Q ss_pred HHHHHHHhccHHHHHHHHHHHhccCC---C-HHHHHHH------------HHHHHHhcCHHHHHHHHHHHhhcCCccHHH
Q 013696 90 LGNECFKQKKFKEAIDCYSRSIALSP---T-AVAYANR------------AMAYLKLRRFQEAEDDCTEALNLDDRYIKA 153 (438)
Q Consensus 90 ~g~~~~~~g~y~~Ai~~y~~al~~~p---~-~~~~~~l------------a~~~~~l~~~~eA~~~~~~al~l~p~~~~a 153 (438)
+|.++...|++++|+.+|.+++.++| . ..++..+ |.++...|++++|+..+.+++..+|.++.+
T Consensus 77 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 156 (359)
T 3ieg_A 77 RGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAEL 156 (359)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHH
Confidence 99999999999999999999999999 6 6666666 799999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH----------HHHHHHHHHHHHHHhhc
Q 013696 154 YSRRATARKELGKLKESIEDSEFALRLEPQNQEIK----------KQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 154 ~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~----------~~l~~a~~~~~ka~~~~ 205 (438)
+..+|.++..+|++++|+..|++++.++|.+..++ +++.+|...|.+++...
T Consensus 157 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~ 218 (359)
T 3ieg_A 157 RELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLKLD 218 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999998874 44555666666655544
No 47
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.63 E-value=1.4e-16 Score=171.14 Aligned_cols=173 Identities=9% Similarity=-0.079 Sum_probs=144.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHh
Q 013696 19 LQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQ 97 (438)
Q Consensus 19 l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~ 97 (438)
.+++++++....+.+...- .......+.....+...|..| ..|++++|+..|++++..+|++..+ ++.+|.+|+..
T Consensus 404 ~~~~~~A~~~~~~al~~~~-~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a--~~~lg~~~~~~ 480 (681)
T 2pzi_A 404 LSQPVQTLDSLRAARHGAL-DADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRL--VWYRAVAELLT 480 (681)
T ss_dssp TCCHHHHHHHHHHHHTC--------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHH--HHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHhhhhcc-cccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHH--HHHHHHHHHHc
Confidence 4567777777777762110 000001112222334455556 8899999999999999999999888 77999999999
Q ss_pred ccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 013696 98 KKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEF 176 (438)
Q Consensus 98 g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~ 176 (438)
|+|++|+.+|+++++++|+ +.+|+++|.+|..+|+|++ +.+|++++.++|+++.+|+++|.++..+|++++|+.+|++
T Consensus 481 g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~ 559 (681)
T 2pzi_A 481 GDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDE 559 (681)
T ss_dssp TCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 9999999999999999999 9999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHhhCCCCHHHHHHHHHHH
Q 013696 177 ALRLEPQNQEIKKQLAEVK 195 (438)
Q Consensus 177 al~l~P~~~~~~~~l~~a~ 195 (438)
+++++|++..++..+..+.
T Consensus 560 al~l~P~~~~a~~~~~~~~ 578 (681)
T 2pzi_A 560 VPPTSRHFTTARLTSAVTL 578 (681)
T ss_dssp SCTTSTTHHHHHHHHHHHT
T ss_pred hcccCcccHHHHHHHHHHH
Confidence 9999999998877766664
No 48
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.63 E-value=1.6e-16 Score=137.52 Aligned_cols=144 Identities=15% Similarity=0.051 Sum_probs=120.8
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHH
Q 013696 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKEL 90 (438)
Q Consensus 12 l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~ 90 (438)
|+......+++++++......+...+ ........+|..| ..|+|++|+.+|++++.++|+++.+ +..+
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p---------~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a--~~~l 71 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPR---------QKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKA--HRFL 71 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHH---------HHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCc---------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HHHH
Confidence 45556667788888877777664332 2223334567777 8999999999999999999999988 7799
Q ss_pred HHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHH-HHHHhhcCCccHHHHHHHHHHHHHcCC
Q 013696 91 GNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDD-CTEALNLDDRYIKAYSRRATARKELGK 166 (438)
Q Consensus 91 g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~-~~~al~l~p~~~~a~~~lg~a~~~lg~ 166 (438)
|.+|...|++++|+.+|.++++++|+ +.+|+++|.+|..+|++++|... +++|++++|+++.+|..++.++...|+
T Consensus 72 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 72 GLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTCCC
T ss_pred HHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999 99999999999999999887765 599999999999999999999988875
No 49
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.63 E-value=4.2e-15 Score=139.14 Aligned_cols=146 Identities=11% Similarity=0.084 Sum_probs=130.1
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC----HHHHHHHHHHHHHhcCHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANRAMAYLKLRRFQE 135 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~----~~~~~~la~~~~~l~~~~e 135 (438)
..|++++|+..|++++..+|.+..+ +..+|.+++..|+|++|+.+|.+++...++ +.+|.++|.+|..+|++++
T Consensus 15 ~~~~~~~A~~~~~~~l~~~p~~~~~--~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~ 92 (272)
T 3u4t_A 15 KNNNYAEAIEVFNKLEAKKYNSPYI--YNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSL 92 (272)
T ss_dssp TTTCHHHHHHHHHHHHHTTCCCSTT--HHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCcHHH--HHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHH
Confidence 7899999999999999999998888 679999999999999999999999994322 6679999999999999999
Q ss_pred HHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH----------HHHHHHHHHHhhc
Q 013696 136 AEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLA----------EVKSLYEKEVFQK 205 (438)
Q Consensus 136 A~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~----------~a~~~~~ka~~~~ 205 (438)
|+.+|.+++.++|.++.+|..+|.++..+|++++|+.+|++++.++|.+..++..+. +|...|.+++...
T Consensus 93 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 172 (272)
T 3u4t_A 93 AIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELK 172 (272)
T ss_dssp HHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999988754444 6666777776665
Q ss_pred hh
Q 013696 206 AS 207 (438)
Q Consensus 206 ~~ 207 (438)
+.
T Consensus 173 p~ 174 (272)
T 3u4t_A 173 PN 174 (272)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 50
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.62 E-value=4.1e-15 Score=145.38 Aligned_cols=186 Identities=15% Similarity=0.147 Sum_probs=146.5
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhhcCCCCCcccc-------ccccccCCCCCCcCcCCCccchHHHHHhhhcCCCCChhH
Q 013696 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVS-------SSLKSAKKPSPSGNSYSRNYDPVSHISSSLMNEESTPDA 84 (438)
Q Consensus 12 l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~y~~g~~~eAi~~~~~al~~~p~~~~a 84 (438)
+...+..++++++++....+.+...+........ .........++..+..|++++|+..|.+++..+|....+
T Consensus 138 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 217 (368)
T 1fch_A 138 LAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDP 217 (368)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccH
Confidence 3445555667777777777766554311110000 000001123555567899999999999999999984334
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHH
Q 013696 85 TSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKE 163 (438)
Q Consensus 85 ~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~ 163 (438)
..+..+|.++...|++++|+.+|.+++.++|. +.++.++|.+|..+|++++|+..|++++.++|+++.+++.+|.++..
T Consensus 218 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 297 (368)
T 1fch_A 218 DVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCIN 297 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 44789999999999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhhCCCC-----------HHHHHHHHHHHHH
Q 013696 164 LGKLKESIEDSEFALRLEPQN-----------QEIKKQLAEVKSL 197 (438)
Q Consensus 164 lg~~~eA~~~~~~al~l~P~~-----------~~~~~~l~~a~~~ 197 (438)
+|++++|+.+|++++.+.|++ ..++..+..+...
T Consensus 298 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 342 (368)
T 1fch_A 298 LGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSM 342 (368)
T ss_dssp HTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHH
Confidence 999999999999999999988 6666666555443
No 51
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.62 E-value=6e-15 Score=138.08 Aligned_cols=174 Identities=11% Similarity=0.020 Sum_probs=145.4
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChh--HHHH
Q 013696 11 DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPD--ATSE 87 (438)
Q Consensus 11 ~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~--a~~~ 87 (438)
.+...+-..++|++++....+.+...+. ....+..+|.+| ..|++++|+..|.+++. .|.++. +..+
T Consensus 8 ~~a~~~~~~~~~~~A~~~~~~~l~~~p~---------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~ 77 (272)
T 3u4t_A 8 RYADFLFKNNNYAEAIEVFNKLEAKKYN---------SPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADF 77 (272)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHTTCC---------CSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCCC---------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHH
Confidence 3456666778999999999888876541 122344455566 89999999999999999 433332 3447
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCC
Q 013696 88 KELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGK 166 (438)
Q Consensus 88 ~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~ 166 (438)
..+|.++...|++++|+.+|.+++.++|. +.++.++|.+|..+|++++|+.+|++++.++|.++.+|+.+|......++
T Consensus 78 ~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~ 157 (272)
T 3u4t_A 78 EYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKE 157 (272)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999 99999999999999999999999999999999999999999955555679
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 013696 167 LKESIEDSEFALRLEPQNQEIKKQLAEV 194 (438)
Q Consensus 167 ~~eA~~~~~~al~l~P~~~~~~~~l~~a 194 (438)
+++|+..|++++.++|++..++..+..+
T Consensus 158 ~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 185 (272)
T 3u4t_A 158 YVKADSSFVKVLELKPNIYIGYLWRARA 185 (272)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 9999999999999999998775554433
No 52
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.62 E-value=1e-14 Score=136.30 Aligned_cols=144 Identities=17% Similarity=0.085 Sum_probs=126.7
Q ss_pred cCCCccchHHHHHhhhcCCCCCh--hHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTP--DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEA 136 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~--~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA 136 (438)
..|++++|+..|.+++...+... .+..+..+|.+++..|++++|+.+|.+++.++|. +.+|.++|.+|...|++++|
T Consensus 17 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A 96 (275)
T 1xnf_A 17 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAA 96 (275)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHH
Confidence 67899999999999999754322 3455889999999999999999999999999998 99999999999999999999
Q ss_pred HHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH---------HHHHHHHHHHHHHHHh
Q 013696 137 EDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI---------KKQLAEVKSLYEKEVF 203 (438)
Q Consensus 137 ~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~---------~~~l~~a~~~~~ka~~ 203 (438)
+.+|.+++.++|.++.+++.+|.++..+|++++|+..|++++.++|++... .+++.+|...+.+++.
T Consensus 97 ~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 172 (275)
T 1xnf_A 97 YEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFE 172 (275)
T ss_dssp HHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999854 2444555555554443
No 53
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.62 E-value=4.5e-15 Score=155.64 Aligned_cols=145 Identities=14% Similarity=0.044 Sum_probs=105.0
Q ss_pred CCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHH
Q 013696 61 YSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDD 139 (438)
Q Consensus 61 ~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~ 139 (438)
.|++++|+..|++++..+|++..+ +..+|.+++..|+|++|+.+|+++++++|+ ..++.++|.+|..+|++++|+.+
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~--~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~ 79 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVA--WLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVL 79 (568)
T ss_dssp -------------------CCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHH
Confidence 367888888888888888887777 668888888888888888888888888888 88888888888888888888888
Q ss_pred HHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH----------H---HHHHHHHHHHHHHHhhch
Q 013696 140 CTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------K---KQLAEVKSLYEKEVFQKA 206 (438)
Q Consensus 140 ~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~----------~---~~l~~a~~~~~ka~~~~~ 206 (438)
|++++.++|+++.+++++|.+|..+|++++|+..|+++++++|++..+ . +++.+|...|.+++...+
T Consensus 80 ~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p 159 (568)
T 2vsy_A 80 LQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGV 159 (568)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTC
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCC
Confidence 888888888888888888888888888888888888888888888765 2 556667777777776654
Q ss_pred h
Q 013696 207 S 207 (438)
Q Consensus 207 ~ 207 (438)
.
T Consensus 160 ~ 160 (568)
T 2vsy_A 160 G 160 (568)
T ss_dssp C
T ss_pred c
Confidence 3
No 54
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.61 E-value=1.2e-14 Score=121.92 Aligned_cols=117 Identities=33% Similarity=0.513 Sum_probs=105.9
Q ss_pred CCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHH
Q 013696 78 EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSR 156 (438)
Q Consensus 78 ~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~ 156 (438)
+|..... ++.+|..++..|+|++|+.+|.+++.++|. +.+|+++|.+|..+|++++|+.+|.+++.++|+++.+|++
T Consensus 5 ~~~~~~~--~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 82 (137)
T 3q49_B 5 KSPSAQE--LKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFF 82 (137)
T ss_dssp -CCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred ccccHHH--HHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 3444445 789999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCC-----CHHHHHHHHHHHH
Q 013696 157 RATARKELGKLKESIEDSEFALRLEPQ-----NQEIKKQLAEVKS 196 (438)
Q Consensus 157 lg~a~~~lg~~~eA~~~~~~al~l~P~-----~~~~~~~l~~a~~ 196 (438)
+|.++..+|++++|+.+|++++.++|+ +..+...+..+..
T Consensus 83 l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~ 127 (137)
T 3q49_B 83 LGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKK 127 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 6666655555544
No 55
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.61 E-value=1.4e-14 Score=130.85 Aligned_cols=148 Identities=14% Similarity=0.031 Sum_probs=132.2
Q ss_pred CCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHh-cC
Q 013696 56 PSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL-RR 132 (438)
Q Consensus 56 ~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l-~~ 132 (438)
|..| ..|++++|+..|.+++..+|.+..+ +..+|.++...|++++|+.+|.+++..+|. ..++.++|.+|... |+
T Consensus 15 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~ 92 (225)
T 2vq2_A 15 AMEYMRGQDYRQATASIEDALKSDPKNELA--WLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNR 92 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhCccchHH--HHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCc
Confidence 3444 7899999999999999999988777 779999999999999999999999999998 89999999999999 99
Q ss_pred HHHHHHHHHHHhh--cCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH----------HHHHHHHHHHHH
Q 013696 133 FQEAEDDCTEALN--LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK----------KQLAEVKSLYEK 200 (438)
Q Consensus 133 ~~eA~~~~~~al~--l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~----------~~l~~a~~~~~k 200 (438)
+++|+..+++++. .+|.+..+++.+|.++...|++++|+..|++++.++|.+..++ +++.+|...+.+
T Consensus 93 ~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 172 (225)
T 2vq2_A 93 PAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKK 172 (225)
T ss_dssp HHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999999 7788899999999999999999999999999999999988763 445566666666
Q ss_pred HHhhc
Q 013696 201 EVFQK 205 (438)
Q Consensus 201 a~~~~ 205 (438)
++...
T Consensus 173 ~~~~~ 177 (225)
T 2vq2_A 173 YQSRV 177 (225)
T ss_dssp HHHHH
T ss_pred HHHhC
Confidence 65544
No 56
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.61 E-value=1.8e-14 Score=133.44 Aligned_cols=149 Identities=17% Similarity=0.135 Sum_probs=131.9
Q ss_pred CCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhc
Q 013696 54 PSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR 131 (438)
Q Consensus 54 ~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~ 131 (438)
.+|..| ..|++++|+..|++++..+|.+..+ +..+|.++...|++++|+.+|.+++..+|. ..++.++|.+|...|
T Consensus 42 ~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~--~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g 119 (252)
T 2ho1_A 42 QLGLGYLQRGNTEQAKVPLRKALEIDPSSADA--HAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQK 119 (252)
T ss_dssp HHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCChHHHHHHHHHHHhcCCChHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHh
Confidence 344445 7899999999999999999988777 779999999999999999999999999998 999999999999999
Q ss_pred CHHHHHHHHHHHhh--cCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHH----------HHHHHHHHHH
Q 013696 132 RFQEAEDDCTEALN--LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKK----------QLAEVKSLYE 199 (438)
Q Consensus 132 ~~~eA~~~~~~al~--l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~----------~l~~a~~~~~ 199 (438)
++++|+..+.+++. .+|.++.+++.+|.++...|++++|+..|++++.++|.+..++. ++.+|...+.
T Consensus 120 ~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 199 (252)
T 2ho1_A 120 RYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYD 199 (252)
T ss_dssp CHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999 88999999999999999999999999999999999999987743 3445555555
Q ss_pred HHHhh
Q 013696 200 KEVFQ 204 (438)
Q Consensus 200 ka~~~ 204 (438)
+++..
T Consensus 200 ~~~~~ 204 (252)
T 2ho1_A 200 LFAQG 204 (252)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 54443
No 57
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.61 E-value=4.8e-15 Score=138.58 Aligned_cols=156 Identities=17% Similarity=0.066 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhc
Q 013696 20 QDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQK 98 (438)
Q Consensus 20 ~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g 98 (438)
++|++++....+.+...+ ...+.....+..+|..| ..|++++|+..|.+++..+|.+..+ +..+|.+++..|
T Consensus 19 ~~~~~A~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~--~~~la~~~~~~~ 91 (275)
T 1xnf_A 19 LQQEVILARMEQILASRA-----LTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEV--FNYLGIYLTQAG 91 (275)
T ss_dssp HHHHHHHHHHHHHHTSSC-----CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHhccc-----ccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHH--HHHHHHHHHHcc
Confidence 567777777777665422 01122233445566666 8899999999999999999998887 779999999999
Q ss_pred cHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 013696 99 KFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFA 177 (438)
Q Consensus 99 ~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~a 177 (438)
+|++|+.+|.+++.++|. ..++.++|.+|..+|++++|+..|++++.++|++...+...+.+ ...|++++|+..+.++
T Consensus 92 ~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~~ 170 (275)
T 1xnf_A 92 NFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQKLDEKQAKEVLKQH 170 (275)
T ss_dssp CHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHHCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH-HHhcCHHHHHHHHHHH
Confidence 999999999999999998 99999999999999999999999999999999887554444433 3446666666666555
Q ss_pred HhhCCC
Q 013696 178 LRLEPQ 183 (438)
Q Consensus 178 l~l~P~ 183 (438)
+...|.
T Consensus 171 ~~~~~~ 176 (275)
T 1xnf_A 171 FEKSDK 176 (275)
T ss_dssp HHHSCC
T ss_pred HhcCCc
Confidence 555443
No 58
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.60 E-value=2.1e-15 Score=131.71 Aligned_cols=163 Identities=15% Similarity=0.053 Sum_probs=139.3
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHH
Q 013696 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKEL 90 (438)
Q Consensus 12 l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~ 90 (438)
+...+...++|++++....+.+...+ .....+..+|..| ..|++++|+..+.+++...|.+..+ +..+
T Consensus 14 ~~~~~~~~~~~~~A~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~~ 82 (186)
T 3as5_A 14 KGISHAKAGRYSQAVMLLEQVYDADA---------FDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKV--ATVL 82 (186)
T ss_dssp HHHHHHHHTCHHHHHHHHTTTCCTTS---------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCc---------cChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHH--HHHH
Confidence 34455566777777766655553322 1122334455555 8899999999999999999988877 6799
Q ss_pred HHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHH
Q 013696 91 GNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKE 169 (438)
Q Consensus 91 g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~e 169 (438)
|.+++..|++++|+.+|.+++..+|. ..++..+|.++...|++++|+..+.+++..+|.++.+++.+|.++...|++++
T Consensus 83 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~ 162 (186)
T 3as5_A 83 GLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEE 162 (186)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHH
Confidence 99999999999999999999999998 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCH
Q 013696 170 SIEDSEFALRLEPQNQ 185 (438)
Q Consensus 170 A~~~~~~al~l~P~~~ 185 (438)
|+.++++++.++|++.
T Consensus 163 A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 163 ALPHFKKANELDEGAS 178 (186)
T ss_dssp HHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHcCCCch
Confidence 9999999999998764
No 59
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.60 E-value=1.3e-15 Score=163.61 Aligned_cols=144 Identities=10% Similarity=-0.058 Sum_probs=129.5
Q ss_pred CcCCCccchHHHHHhhh--------cCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHH
Q 013696 59 NSYSRNYDPVSHISSSL--------MNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLK 129 (438)
Q Consensus 59 y~~g~~~eAi~~~~~al--------~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~ 129 (438)
+..|++++|+..|++++ ..+|++..+ +..+|.+++..|+|++|+..|+++++++|+ +.+|+++|.+|..
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~--~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~ 479 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVEL--PLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELL 479 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhH--HHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHH
Confidence 36799999999999999 889998888 679999999999999999999999999999 9999999999999
Q ss_pred hcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH----------HHHHHHHH
Q 013696 130 LRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQL----------AEVKSLYE 199 (438)
Q Consensus 130 l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l----------~~a~~~~~ 199 (438)
+|+|++|+.+|++++.++|+++.+|+++|.++..+|++++ +.+|+++++++|++..++..+ ++|...|+
T Consensus 480 ~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~ 558 (681)
T 2pzi_A 480 TGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLD 558 (681)
T ss_dssp HTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 999999999999999885444 44455555
Q ss_pred HHHhhc
Q 013696 200 KEVFQK 205 (438)
Q Consensus 200 ka~~~~ 205 (438)
+++.++
T Consensus 559 ~al~l~ 564 (681)
T 2pzi_A 559 EVPPTS 564 (681)
T ss_dssp TSCTTS
T ss_pred hhcccC
Confidence 444444
No 60
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.60 E-value=6.6e-15 Score=133.09 Aligned_cols=131 Identities=18% Similarity=0.166 Sum_probs=116.1
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~ 138 (438)
..|++++|+..|.+++ +| +..+ ++.+|.+|+..|+|++|+.+|.+++.++|. +.+++++|.+|..+|++++|+.
T Consensus 18 ~~~~~~~A~~~~~~a~--~~-~~~~--~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~ 92 (213)
T 1hh8_A 18 DKKDWKGALDAFSAVQ--DP-HSRI--CFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIK 92 (213)
T ss_dssp HTTCHHHHHHHHHTSS--SC-CHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HhCCHHHHHHHHHHHc--CC-ChHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHH
Confidence 7799999999999996 33 3444 889999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHhhcCCccH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 013696 139 DCTEALNLDDRYI----------------KAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSL 197 (438)
Q Consensus 139 ~~~~al~l~p~~~----------------~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~ 197 (438)
+|++++.+.|.+. .+++++|.++..+|++++|+.+|++++.++|++.. ..+..+...
T Consensus 93 ~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~--~~~~~a~~~ 165 (213)
T 1hh8_A 93 DLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH--SKIDKAMEC 165 (213)
T ss_dssp HHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG--GHHHHHHHH
T ss_pred HHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccccc--chHHHHHHH
Confidence 9999999877665 99999999999999999999999999999998743 333444443
No 61
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.59 E-value=2.3e-16 Score=151.60 Aligned_cols=172 Identities=10% Similarity=0.038 Sum_probs=114.2
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCCh----hHHHH
Q 013696 13 QGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTP----DATSE 87 (438)
Q Consensus 13 ~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~----~a~~~ 87 (438)
...+..+++|++++..+.+.+....... ........+..+|..| .+|++++|+.+|++++.+.+... .+..+
T Consensus 44 ~~~~~~~g~~~~A~~~~~~al~~~~~~~---~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~ 120 (292)
T 1qqe_A 44 ATIYRLRKELNLAGDSFLKAADYQKKAG---NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFK 120 (292)
T ss_dssp HHHHHHTTCTHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3455556667777776666654332000 0111122345566666 77888888888888887665332 13447
Q ss_pred HHHHHHHHHh-ccHHHHHHHHHHHhccCCC-------HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHH-------
Q 013696 88 KELGNECFKQ-KKFKEAIDCYSRSIALSPT-------AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIK------- 152 (438)
Q Consensus 88 ~~~g~~~~~~-g~y~~Ai~~y~~al~~~p~-------~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~------- 152 (438)
..+|.+|... |+|++|+.+|++++.+.|. ..++.++|.+|..+|+|++|+.+|++++.+.|++..
T Consensus 121 ~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 200 (292)
T 1qqe_A 121 FELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKD 200 (292)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHH
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHH
Confidence 7888888885 8888888888888887653 356778888888888888888888888888776532
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH
Q 013696 153 AYSRRATARKELGKLKESIEDSEFALRLEPQNQEI 187 (438)
Q Consensus 153 a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~ 187 (438)
+|+++|.++..+|++++|+.+|++++.++|+....
T Consensus 201 ~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 201 YFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 57788888888888888888888888888876543
No 62
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.59 E-value=2.7e-14 Score=136.62 Aligned_cols=182 Identities=10% Similarity=0.057 Sum_probs=142.8
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhhcCCCCCcccccc----ccccCCCC-CC-cC-cCCCccchHHHHHhhhcCCCCChhH
Q 013696 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSS----LKSAKKPS-PS-GN-SYSRNYDPVSHISSSLMNEESTPDA 84 (438)
Q Consensus 12 l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~-~~-~y-~~g~~~eAi~~~~~al~~~p~~~~a 84 (438)
+...+...++|++++....+.+...+.......... .......+ +. .| ..|++++|+..+.+++...|.+..+
T Consensus 95 la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 174 (327)
T 3cv0_A 95 LAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQL 174 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHH
Confidence 344555566777777777776655431111000000 00000011 43 34 8899999999999999999988777
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHH
Q 013696 85 TSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKE 163 (438)
Q Consensus 85 ~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~ 163 (438)
+..+|.++...|++++|+.+|.+++..+|. ..++.++|.+|...|++++|+..|++++.++|+++.+++.+|.++..
T Consensus 175 --~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 252 (327)
T 3cv0_A 175 --HASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSN 252 (327)
T ss_dssp --HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 779999999999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhhCCC------------CHHHHHHHHHHH
Q 013696 164 LGKLKESIEDSEFALRLEPQ------------NQEIKKQLAEVK 195 (438)
Q Consensus 164 lg~~~eA~~~~~~al~l~P~------------~~~~~~~l~~a~ 195 (438)
+|++++|+..|++++.+.|. +..++..+..+.
T Consensus 253 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 296 (327)
T 3cv0_A 253 MSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLL 296 (327)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHH
Confidence 99999999999999999999 566655555444
No 63
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.59 E-value=3.5e-15 Score=153.50 Aligned_cols=184 Identities=14% Similarity=0.087 Sum_probs=157.3
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHH
Q 013696 13 QGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELG 91 (438)
Q Consensus 13 ~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g 91 (438)
+.++...++|++++....+.+...+. ...+..+|..| ..|++++|+..|.+++..+|++..+ +..+|
T Consensus 250 g~~~~~~~~~~~A~~~~~~~~~~~~~----------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~l~ 317 (537)
T 3fp2_A 250 GIFHFLKNNLLDAQVLLQESINLHPT----------PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPT--YYHRG 317 (537)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCC----------HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHH--HHHHH
T ss_pred HHHHHhcccHHHHHHHHHHHHhcCCC----------chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHH--HHHHH
Confidence 34555566778888888777766541 12334455566 8899999999999999999998887 77999
Q ss_pred HHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHH
Q 013696 92 NECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKES 170 (438)
Q Consensus 92 ~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA 170 (438)
.++...|+|++|+.+|.+++.++|. ..++.++|.+|..+|++++|+..|.+++.++|+++.+++.+|.++...|++++|
T Consensus 318 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 397 (537)
T 3fp2_A 318 QMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTA 397 (537)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999999998 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCHHH----------------H----------HHHHHHHHHHHHHHhhchhh
Q 013696 171 IEDSEFALRLEPQNQEI----------------K----------KQLAEVKSLYEKEVFQKASK 208 (438)
Q Consensus 171 ~~~~~~al~l~P~~~~~----------------~----------~~l~~a~~~~~ka~~~~~~~ 208 (438)
+..|++++.++|.+... . +++.+|...|.+++...+..
T Consensus 398 ~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~ 461 (537)
T 3fp2_A 398 IKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDPRS 461 (537)
T ss_dssp HHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCCCC
Confidence 99999999998765321 2 88889999999888776443
No 64
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.59 E-value=9.1e-15 Score=147.07 Aligned_cols=185 Identities=11% Similarity=0.098 Sum_probs=147.4
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHH
Q 013696 13 QGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELG 91 (438)
Q Consensus 13 ~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g 91 (438)
...+...++|++++....+.+...+. ....+..+|..| ..|++++|+..|.+++..+|.+..+ +..+|
T Consensus 150 a~~~~~~~~~~~A~~~~~~~~~~~~~---------~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~--~~~l~ 218 (450)
T 2y4t_A 150 ALNAFGSGDYTAAIAFLDKILEVCVW---------DAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEA--FYKIS 218 (450)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHCSCHHH--HHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCC---------ChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHH--HHHHH
Confidence 44466778889988888887765531 122334455556 7899999999999999988888777 66999
Q ss_pred HHHHHhccHHHHHHHHHHHhccCCC-HHHHHHH------------HHHHHHhcCHHHHHHHHHHHhhcCCccH----HHH
Q 013696 92 NECFKQKKFKEAIDCYSRSIALSPT-AVAYANR------------AMAYLKLRRFQEAEDDCTEALNLDDRYI----KAY 154 (438)
Q Consensus 92 ~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~l------------a~~~~~l~~~~eA~~~~~~al~l~p~~~----~a~ 154 (438)
.+|...|++++|+.+|.+++.++|+ ..++..+ |.++...|++++|+..|++++.++|+++ .++
T Consensus 219 ~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~ 298 (450)
T 2y4t_A 219 TLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSK 298 (450)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHH
Confidence 9999999999999999999999988 5555444 8899999999999999999999999874 478
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH----------HHHHHHHHHHHHHHHhhchhh
Q 013696 155 SRRATARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLAEVKSLYEKEVFQKASK 208 (438)
Q Consensus 155 ~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~~a~~~~~ka~~~~~~~ 208 (438)
..+|.++..+|++++|+..|++++.++|++..+ .+++.+|...|++++.+.+..
T Consensus 299 ~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 362 (450)
T 2y4t_A 299 ERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNEND 362 (450)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcch
Confidence 889999999999999999999999999988776 345667777777777665443
No 65
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.59 E-value=8e-15 Score=141.07 Aligned_cols=163 Identities=11% Similarity=0.013 Sum_probs=79.8
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHH
Q 013696 11 DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKE 89 (438)
Q Consensus 11 ~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~ 89 (438)
.+..++...++++++++..++.+.... .+.....+..+|..| ..|++++|+..|++ |.+..+ +..
T Consensus 70 ~la~~~~~~~~~~~A~~~l~~ll~~~~-------~P~~~~~~~~la~~~~~~g~~~~Al~~l~~-----~~~~~~--~~~ 135 (291)
T 3mkr_A 70 MFAEYLASHSRRDAIVAELDREMSRSV-------DVTNTTFLLMAASIYFYDQNPDAALRTLHQ-----GDSLEC--MAM 135 (291)
T ss_dssp HHHHHHHCSTTHHHHHHHHHHHHHSCC-------CCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-----CCSHHH--HHH
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHhccc-------CCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-----CCCHHH--HHH
Confidence 345666666677777777666654321 001111122233333 44555555555554 344444 335
Q ss_pred HHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHH--HHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCC
Q 013696 90 LGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRA--MAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGK 166 (438)
Q Consensus 90 ~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la--~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~ 166 (438)
+|.+|.+.|++++|+..|+++++.+|+ .......| .++...|++++|+..|++++..+|+++.+|+++|.++..+|+
T Consensus 136 l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~ 215 (291)
T 3mkr_A 136 TVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGR 215 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Confidence 555555555555555555555555554 21111111 111222455555555555555555555555555555555555
Q ss_pred HHHHHHHHHHHHhhCCCCHHH
Q 013696 167 LKESIEDSEFALRLEPQNQEI 187 (438)
Q Consensus 167 ~~eA~~~~~~al~l~P~~~~~ 187 (438)
+++|+..|++++.++|+++++
T Consensus 216 ~~eA~~~l~~al~~~p~~~~~ 236 (291)
T 3mkr_A 216 WEAAEGVLQEALDKDSGHPET 236 (291)
T ss_dssp HHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHH
Confidence 555555555555555555554
No 66
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.59 E-value=6.8e-15 Score=122.50 Aligned_cols=100 Identities=16% Similarity=0.090 Sum_probs=91.5
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcC
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG 165 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg 165 (438)
++.+|..++..|++++|+.+|.++++++|+ +.+|+++|.++..+|++++|+..|++++.++|+++.+++.+|.++..+|
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g 99 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEH 99 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 668999999999999999999999999998 9999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhCCCCHH
Q 013696 166 KLKESIEDSEFALRLEPQNQE 186 (438)
Q Consensus 166 ~~~eA~~~~~~al~l~P~~~~ 186 (438)
++++|+..|+++++++|++..
T Consensus 100 ~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 100 NANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHC-------
T ss_pred CHHHHHHHHHHHHHhCcCCCC
Confidence 999999999999999998754
No 67
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.58 E-value=8.5e-15 Score=147.29 Aligned_cols=184 Identities=14% Similarity=0.055 Sum_probs=151.6
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHH
Q 013696 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKEL 90 (438)
Q Consensus 12 l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~ 90 (438)
+...+-..++|++++....+.+...+. ....+..+|.+| ..|++++|+..|.+++..+|++..+ +..+
T Consensus 32 ~~~~~~~~g~~~~A~~~~~~~l~~~p~---------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~l 100 (450)
T 2y4t_A 32 LGKKLLAAGQLADALSQFHAAVDGDPD---------NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAA--RLQR 100 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCCc---------cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHH--HHHH
Confidence 344555667888988888888765431 122344456666 8899999999999999999998877 6799
Q ss_pred HHHHHHhccHHHHHHHHHHHhccCCC-H---HHHHHH------------HHHHHHhcCHHHHHHHHHHHhhcCCccHHHH
Q 013696 91 GNECFKQKKFKEAIDCYSRSIALSPT-A---VAYANR------------AMAYLKLRRFQEAEDDCTEALNLDDRYIKAY 154 (438)
Q Consensus 91 g~~~~~~g~y~~Ai~~y~~al~~~p~-~---~~~~~l------------a~~~~~l~~~~eA~~~~~~al~l~p~~~~a~ 154 (438)
|.+|...|++++|+.+|.+++.++|. . .++..+ |.++...|++++|+..|++++.++|.++.++
T Consensus 101 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 180 (450)
T 2y4t_A 101 GHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELR 180 (450)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 99999999999999999999999998 5 665544 7779999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH----------HHHHHHHHHHHHHHhhch
Q 013696 155 SRRATARKELGKLKESIEDSEFALRLEPQNQEIK----------KQLAEVKSLYEKEVFQKA 206 (438)
Q Consensus 155 ~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~----------~~l~~a~~~~~ka~~~~~ 206 (438)
+.+|.+|...|++++|+..|++++.++|.+..++ +++.+|...|.+++...+
T Consensus 181 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p 242 (450)
T 2y4t_A 181 ELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQ 242 (450)
T ss_dssp HHHHHHHHHTTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999998773 455667777777665543
No 68
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.58 E-value=8.4e-14 Score=112.32 Aligned_cols=112 Identities=32% Similarity=0.524 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHH
Q 013696 84 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 162 (438)
Q Consensus 84 a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~ 162 (438)
+..++.+|..++..|+|++|+.+|.+++..+|. +.++.++|.++..+|++++|+..+.+++.++|+++.+++.+|.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 83 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE 83 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 344789999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 013696 163 ELGKLKESIEDSEFALRLEPQNQEIKKQLAEVK 195 (438)
Q Consensus 163 ~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~ 195 (438)
.+|++++|+..|++++.++|++..++..+..+.
T Consensus 84 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 84 FLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 999999999999999999999998877766553
No 69
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.58 E-value=1.3e-14 Score=151.50 Aligned_cols=151 Identities=13% Similarity=0.076 Sum_probs=96.2
Q ss_pred CCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcC
Q 013696 55 SPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRR 132 (438)
Q Consensus 55 ~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~ 132 (438)
++..| ..|++++|+..|++++...|++..+ +..+|.+|.+.|++++|+.+|.++++++|. +.+|..+|.+|...|+
T Consensus 413 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~--~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 490 (597)
T 2xpi_A 413 FAHSFAIEGEHDQAISAYTTAARLFQGTHLP--YLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSD 490 (597)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHTTTTCSHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCccchHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC
Confidence 34444 5566666666666666666665555 446666666666666666666666666666 6666666666666666
Q ss_pred HHHHHHHHHHHhhc------CCcc-HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH----------HHHHHHHH
Q 013696 133 FQEAEDDCTEALNL------DDRY-IKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLAEVK 195 (438)
Q Consensus 133 ~~eA~~~~~~al~l------~p~~-~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~~a~ 195 (438)
+++|+..|++++.+ +|++ ..+|..+|.++...|++++|+..|++++.++|++..+ .+++.+|.
T Consensus 491 ~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~ 570 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAI 570 (597)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHH
Confidence 66666666666665 4443 5666666666666666666666666666666666554 24445556
Q ss_pred HHHHHHHhhchh
Q 013696 196 SLYEKEVFQKAS 207 (438)
Q Consensus 196 ~~~~ka~~~~~~ 207 (438)
..|++++.+.+.
T Consensus 571 ~~~~~~l~~~p~ 582 (597)
T 2xpi_A 571 THLHESLAISPN 582 (597)
T ss_dssp HHHHHHHHHCTT
T ss_pred HHHHHHHhcCCC
Confidence 666666555543
No 70
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.57 E-value=5.7e-15 Score=141.31 Aligned_cols=112 Identities=12% Similarity=0.203 Sum_probs=79.3
Q ss_pred HHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHH
Q 013696 94 CFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIE 172 (438)
Q Consensus 94 ~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~ 172 (438)
+...|++++|+.+|.+++..+|. ..++..+|.+|...|++++|+..+.+++.++|+++.++..+|.++...|++++|+.
T Consensus 148 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 227 (327)
T 3cv0_A 148 FAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALD 227 (327)
T ss_dssp TTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHH
Confidence 44444445555555555555555 66777788888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHhhCCCCHHHH----------HHHHHHHHHHHHHHhhc
Q 013696 173 DSEFALRLEPQNQEIK----------KQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 173 ~~~~al~l~P~~~~~~----------~~l~~a~~~~~ka~~~~ 205 (438)
.|++++.++|.+..++ +++.+|...|.+++...
T Consensus 228 ~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 270 (327)
T 3cv0_A 228 AYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQ 270 (327)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 8888888888877653 34455555555555443
No 71
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.57 E-value=2.3e-14 Score=132.01 Aligned_cols=128 Identities=16% Similarity=0.075 Sum_probs=114.8
Q ss_pred cCCCccchHHHHHhhhcCCCCChh-HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC----HHHHHHHHHHHHH-----
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPD-ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANRAMAYLK----- 129 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~-a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~----~~~~~~la~~~~~----- 129 (438)
..|++++|+..|++++...|.++. ..+++.+|.+|+..|+|++|+..|.++++.+|+ ..+++.+|.++..
T Consensus 16 ~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~ 95 (225)
T 2yhc_A 16 QDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSA 95 (225)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhh
Confidence 779999999999999999987753 234789999999999999999999999999998 3589999999987
Q ss_pred -------------hcCHHHHHHHHHHHhhcCCccHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHh
Q 013696 130 -------------LRRFQEAEDDCTEALNLDDRYIKAY-----------------SRRATARKELGKLKESIEDSEFALR 179 (438)
Q Consensus 130 -------------l~~~~eA~~~~~~al~l~p~~~~a~-----------------~~lg~a~~~lg~~~eA~~~~~~al~ 179 (438)
+|++++|+..|++++..+|+++.++ +.+|.+|...|++.+|+..|+++++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~ 175 (225)
T 2yhc_A 96 LQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLR 175 (225)
T ss_dssp ------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 5789999999999999999987554 6789999999999999999999999
Q ss_pred hCCCCHHH
Q 013696 180 LEPQNQEI 187 (438)
Q Consensus 180 l~P~~~~~ 187 (438)
..|+++..
T Consensus 176 ~~p~~~~~ 183 (225)
T 2yhc_A 176 DYPDTQAT 183 (225)
T ss_dssp HSTTSHHH
T ss_pred HCcCCCcc
Confidence 99998743
No 72
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.57 E-value=2.6e-14 Score=137.45 Aligned_cols=150 Identities=13% Similarity=0.048 Sum_probs=117.3
Q ss_pred CCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHh
Q 013696 53 KPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL 130 (438)
Q Consensus 53 ~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l 130 (438)
..+|..| .+|++++|+..|++++..+|+.........+...+...|++++|+.+|++++..+|. +.+|+++|.++..+
T Consensus 134 ~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~ 213 (291)
T 3mkr_A 134 AMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQ 213 (291)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 3344455 789999999999999988887654322111223344558899999999999999988 88899999999999
Q ss_pred cCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHH-HHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHh
Q 013696 131 RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKE-SIEDSEFALRLEPQNQEIKKQLAEVKSLYEKEVF 203 (438)
Q Consensus 131 ~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~e-A~~~~~~al~l~P~~~~~~~~l~~a~~~~~ka~~ 203 (438)
|++++|+..+++++.++|+++.+++++|.++..+|++.+ +..+++++++++|+++.+.. +.+....|.+++.
T Consensus 214 g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d-~~~~~~~fd~~~~ 286 (291)
T 3mkr_A 214 GRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKE-YRAKENDFDRLVL 286 (291)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHH-HHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHH-HHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999876 56788999999999987753 4555556665543
No 73
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=8.4e-14 Score=117.58 Aligned_cols=116 Identities=31% Similarity=0.497 Sum_probs=106.5
Q ss_pred CCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC----HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHH
Q 013696 77 NEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIK 152 (438)
Q Consensus 77 ~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~----~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~ 152 (438)
..|..... ++.+|..++..|+|++|+.+|.+++.++|+ ..++.++|.+|..+|+|++|+.+|.+++.++|+++.
T Consensus 23 ~~~~~~~~--~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 100 (148)
T 2dba_A 23 PGASSVEQ--LRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVK 100 (148)
T ss_dssp TTCCCHHH--HHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHH
T ss_pred cchHHHHH--HHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHH
Confidence 34555555 789999999999999999999999999998 688999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 013696 153 AYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (438)
Q Consensus 153 a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a 194 (438)
+++.+|.++..+|++++|+.+|++++.++|++..++..+..+
T Consensus 101 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 142 (148)
T 2dba_A 101 ALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNI 142 (148)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 999999999999999999999999999999998887665544
No 74
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.56 E-value=4.5e-14 Score=128.56 Aligned_cols=109 Identities=20% Similarity=0.169 Sum_probs=104.6
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHH----------------HHHHHHHhcCHHHHHHHHHHHhhcCCc
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYAN----------------RAMAYLKLRRFQEAEDDCTEALNLDDR 149 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~----------------la~~~~~l~~~~eA~~~~~~al~l~p~ 149 (438)
+...|..++..|+|++|+.+|.+++.++|+ +.+|++ +|.+|..+|++++|+..|++++.++|+
T Consensus 7 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 86 (208)
T 3urz_A 7 MLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPN 86 (208)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Confidence 678999999999999999999999999999 888888 999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 013696 150 YIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVK 195 (438)
Q Consensus 150 ~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~ 195 (438)
++.+|+++|.++..+|++++|+.+|+++++++|++..++..++.+.
T Consensus 87 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~ 132 (208)
T 3urz_A 87 NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYY 132 (208)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988777654
No 75
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.56 E-value=1.5e-13 Score=118.30 Aligned_cols=111 Identities=37% Similarity=0.660 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHH
Q 013696 84 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 162 (438)
Q Consensus 84 a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~ 162 (438)
+..++.+|..++..|+|++|+.+|.+++.++|. ..++.++|.++..+|+|++|+.++.+++.++|.++.+|+++|.++.
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~ 92 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 92 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 445889999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 013696 163 ELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (438)
Q Consensus 163 ~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a 194 (438)
.+|++++|+.+|++++.++|.+..++..+..+
T Consensus 93 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 124 (166)
T 1a17_A 93 ALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 124 (166)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 99999999999999999999998876544444
No 76
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.56 E-value=6e-14 Score=115.42 Aligned_cols=123 Identities=29% Similarity=0.415 Sum_probs=114.3
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~ 138 (438)
..|++++|+..|.+++...|.+..+ +..+|.++...|++++|+.+|.+++...|. ..++.++|.++...|++++|+.
T Consensus 13 ~~~~~~~A~~~~~~~~~~~~~~~~~--~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 90 (136)
T 2fo7_A 13 KQGDYDEAIEYYQKALELDPRSAEA--WYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIE 90 (136)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HcCcHHHHHHHHHHHHHcCCcchhH--HHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHH
Confidence 6688999999999999998887776 678999999999999999999999999998 8889999999999999999999
Q ss_pred HHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 013696 139 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN 184 (438)
Q Consensus 139 ~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~ 184 (438)
.+.+++...|.+..+++.+|.++...|++++|+..|++++.++|.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 91 YYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 9999999999999999999999999999999999999999998863
No 77
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.55 E-value=5.6e-14 Score=116.25 Aligned_cols=113 Identities=32% Similarity=0.541 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHH
Q 013696 84 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 162 (438)
Q Consensus 84 a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~ 162 (438)
...++.+|..++..|+|++|+.+|.+++..+|. ..+++++|.+|...|++++|+.+|++++.++|.++.+++.+|.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 95 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALE 95 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 344889999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 013696 163 ELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKS 196 (438)
Q Consensus 163 ~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (438)
.+|++++|+.+|++++.++|.+..++..+..+..
T Consensus 96 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 129 (133)
T 2lni_A 96 AMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMM 129 (133)
T ss_dssp HTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 9999999999999999999999888776665543
No 78
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.55 E-value=2.7e-14 Score=131.47 Aligned_cols=167 Identities=7% Similarity=-0.032 Sum_probs=137.5
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhH-HHHHHH
Q 013696 13 QGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDA-TSEKEL 90 (438)
Q Consensus 13 ~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a-~~~~~~ 90 (438)
...+-..++|++++....+.+...+... .....+..+|.+| ..|++++|+..|++++..+|++..+ .+++.+
T Consensus 11 a~~~~~~g~~~~A~~~~~~~~~~~p~~~------~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~ 84 (225)
T 2yhc_A 11 AQQKLQDGNWRQAITQLEALDNRYPFGP------YSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMR 84 (225)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTST------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCh------HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHH
Confidence 3445567899999999998887654111 1112334456666 8999999999999999999988763 347789
Q ss_pred HHHHHH------------------hccHHHHHHHHHHHhccCCC-HHHH-----------------HHHHHHHHHhcCHH
Q 013696 91 GNECFK------------------QKKFKEAIDCYSRSIALSPT-AVAY-----------------ANRAMAYLKLRRFQ 134 (438)
Q Consensus 91 g~~~~~------------------~g~y~~Ai~~y~~al~~~p~-~~~~-----------------~~la~~~~~l~~~~ 134 (438)
|.+++. .|++++|+..|.++++.+|+ ..++ ..+|.+|...|+|.
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~ 164 (225)
T 2yhc_A 85 GLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWV 164 (225)
T ss_dssp HHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 999886 57999999999999999998 3222 67899999999999
Q ss_pred HHHHHHHHHhhcCCccH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 013696 135 EAEDDCTEALNLDDRYI---KAYSRRATARKELGKLKESIEDSEFALRLEPQNQ 185 (438)
Q Consensus 135 eA~~~~~~al~l~p~~~---~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~ 185 (438)
+|+..|++++...|+++ .+++++|.++..+|++++|+..++++....|++.
T Consensus 165 ~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~~~ 218 (225)
T 2yhc_A 165 AVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNTL 218 (225)
T ss_dssp HHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSCCC
T ss_pred HHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCCch
Confidence 99999999999999875 7899999999999999999999999999888753
No 79
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.55 E-value=6.1e-15 Score=151.67 Aligned_cols=188 Identities=15% Similarity=0.140 Sum_probs=153.4
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHH
Q 013696 13 QGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELG 91 (438)
Q Consensus 13 ~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g 91 (438)
.++....+.|++++....+.+...+.... ........+..+|..| ..|++++|+..|.+++..+|. ..+ +..+|
T Consensus 209 ~~~~~a~~~~~~A~~~~~~~l~~~p~~~~--~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~-~~~--~~~l~ 283 (537)
T 3fp2_A 209 EGYLVANDLLTKSTDMYHSLLSANTVDDP--LRENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPT-PNS--YIFLA 283 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC--CCCHH--HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHH--HHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHCCCcch--hhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCC-chH--HHHHH
Confidence 45556667888888888888765541110 0000111233444555 789999999999999999988 555 77999
Q ss_pred HHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHH
Q 013696 92 NECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKES 170 (438)
Q Consensus 92 ~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA 170 (438)
.+++..|++++|+.+|.+++..+|. +.++.++|.+|...|++++|+..|++++.++|+++.+++.+|.++..+|++++|
T Consensus 284 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A 363 (537)
T 3fp2_A 284 LTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTES 363 (537)
T ss_dssp HHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCHHHH----------HHHHHHHHHHHHHHhhc
Q 013696 171 IEDSEFALRLEPQNQEIK----------KQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 171 ~~~~~~al~l~P~~~~~~----------~~l~~a~~~~~ka~~~~ 205 (438)
+..|++++.++|++..++ +++.+|...|.+++...
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 408 (537)
T 3fp2_A 364 EAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLE 408 (537)
T ss_dssp HHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcC
Confidence 999999999999998763 45566666666666554
No 80
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.54 E-value=3.5e-14 Score=148.25 Aligned_cols=172 Identities=16% Similarity=0.114 Sum_probs=146.1
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHH
Q 013696 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKEL 90 (438)
Q Consensus 12 l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~ 90 (438)
+...+...++|+++++...+.+...+ .....+..++..| ..|++++|+..|++++...|.++.+ +..+
T Consensus 413 l~~~~~~~g~~~~A~~~~~~~~~~~~---------~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~--~~~l 481 (597)
T 2xpi_A 413 FAHSFAIEGEHDQAISAYTTAARLFQ---------GTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLL--LNEL 481 (597)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHTTT---------TCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHH--HHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCc---------cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHH--HHHH
Confidence 44555556677777776666665432 1122333455556 7899999999999999999998877 7799
Q ss_pred HHHHHHhccHHHHHHHHHHHhcc------CCC--HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHH
Q 013696 91 GNECFKQKKFKEAIDCYSRSIAL------SPT--AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 162 (438)
Q Consensus 91 g~~~~~~g~y~~Ai~~y~~al~~------~p~--~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~ 162 (438)
|.+|...|++++|+.+|.+++++ +|. ..+|.++|.+|...|++++|+..|++++.++|+++.+|..+|.+|.
T Consensus 482 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 561 (597)
T 2xpi_A 482 GVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYL 561 (597)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 99999999999999999999998 666 7899999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 013696 163 ELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (438)
Q Consensus 163 ~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a 194 (438)
..|++++|+..|+++++++|+++.++..+..+
T Consensus 562 ~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~ 593 (597)
T 2xpi_A 562 HKKIPGLAITHLHESLAISPNEIMASDLLKRA 593 (597)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHT
T ss_pred HhCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Confidence 99999999999999999999999887766554
No 81
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.54 E-value=1.4e-14 Score=138.98 Aligned_cols=129 Identities=10% Similarity=-0.087 Sum_probs=113.2
Q ss_pred cC-cCCCccchHHHHHhhhcCCCCC----hhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-------HHHHHHHHH
Q 013696 58 GN-SYSRNYDPVSHISSSLMNEEST----PDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAM 125 (438)
Q Consensus 58 ~y-~~g~~~eAi~~~~~al~~~p~~----~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-------~~~~~~la~ 125 (438)
.| ..|++++|+.+|.+++.+.+.. ..+..+.++|.+|...|+|++|+.+|.+++.+.|. +.++.++|.
T Consensus 46 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~ 125 (292)
T 1qqe_A 46 IYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGE 125 (292)
T ss_dssp HHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 35 6899999999999999874322 22556889999999999999999999999998753 568999999
Q ss_pred HHHHh-cCHHHHHHHHHHHhhcCCcc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Q 013696 126 AYLKL-RRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGKLKESIEDSEFALRLEPQNQE 186 (438)
Q Consensus 126 ~~~~l-~~~~eA~~~~~~al~l~p~~------~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~ 186 (438)
+|... |++++|+.+|++|+.+.|.. ..++.++|.++..+|+|++|+.+|++++.+.|++..
T Consensus 126 ~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 126 ILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 99996 99999999999999998754 567999999999999999999999999999987643
No 82
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.53 E-value=3.1e-13 Score=110.91 Aligned_cols=113 Identities=37% Similarity=0.540 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHH
Q 013696 84 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 162 (438)
Q Consensus 84 a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~ 162 (438)
+..++.+|..++..|+|++|+.+|.+++..+|. +.++.++|.++...|++++|+.++.+++.++|+++.+++.+|.++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALS 91 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHH
Confidence 344789999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 013696 163 ELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKS 196 (438)
Q Consensus 163 ~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (438)
.+|++++|+.+|++++.++|++..++..+..+..
T Consensus 92 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 125 (131)
T 2vyi_A 92 SLNKHVEAVAYYKKALELDPDNETYKSNLKIAEL 125 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHH
Confidence 9999999999999999999999888776666554
No 83
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.53 E-value=1.7e-14 Score=151.28 Aligned_cols=155 Identities=15% Similarity=0.032 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhcc
Q 013696 21 DWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKK 99 (438)
Q Consensus 21 ~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~ 99 (438)
++++++....+.+...+ .....+..+|..| ..|++++|+..|++++..+|++..+ +..+|.+|...|+
T Consensus 4 ~~~~A~~~~~~al~~~p---------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~lg~~~~~~g~ 72 (568)
T 2vsy_A 4 DGPRELLQLRAAVRHRP---------QDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEA--VARLGRVRWTQQR 72 (568)
T ss_dssp --------------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHH--HHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHhCC---------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHCCC
Confidence 45555555555554332 1222344455566 7899999999999999999998887 7799999999999
Q ss_pred HHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHc---CCHHHHHHHHH
Q 013696 100 FKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKEL---GKLKESIEDSE 175 (438)
Q Consensus 100 y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~l---g~~~eA~~~~~ 175 (438)
+++|+.+|+++++++|+ ..+++++|.+|..+|++++|+..|++++.++|+++.+++++|.++..+ |++++|+..|+
T Consensus 73 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~ 152 (568)
T 2vsy_A 73 HAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVR 152 (568)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 99999999999999999 999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHhhCCCCHH
Q 013696 176 FALRLEPQNQE 186 (438)
Q Consensus 176 ~al~l~P~~~~ 186 (438)
++++++|.+..
T Consensus 153 ~al~~~p~~~~ 163 (568)
T 2vsy_A 153 AAVAQGVGAVE 163 (568)
T ss_dssp HHHHHTCCCSC
T ss_pred HHHhcCCcccC
Confidence 99999998643
No 84
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.53 E-value=2.8e-13 Score=112.12 Aligned_cols=104 Identities=15% Similarity=0.151 Sum_probs=98.4
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhccCCC-H---HHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcc---HHHHHHHHH
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIALSPT-A---VAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY---IKAYSRRAT 159 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~---~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~---~~a~~~lg~ 159 (438)
++.+|..++..|+|++|+..|.+++..+|+ . .+++++|.+|..+|+|++|+..|.+++..+|++ +.+++.+|.
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~ 84 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGL 84 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHH
Confidence 668999999999999999999999999998 4 799999999999999999999999999999999 899999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhhCCCCHHHHHH
Q 013696 160 ARKELGKLKESIEDSEFALRLEPQNQEIKKQ 190 (438)
Q Consensus 160 a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~ 190 (438)
++..+|++++|+..|++++...|+++.+...
T Consensus 85 ~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a 115 (129)
T 2xev_A 85 SQYGEGKNTEAQQTLQQVATQYPGSDAARVA 115 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTSHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHCCCChHHHHH
Confidence 9999999999999999999999999876443
No 85
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.53 E-value=1.3e-13 Score=137.24 Aligned_cols=116 Identities=29% Similarity=0.462 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHhc----------------cCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhc
Q 013696 84 ATSEKELGNECFKQKKFKEAIDCYSRSIA----------------LSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNL 146 (438)
Q Consensus 84 a~~~~~~g~~~~~~g~y~~Ai~~y~~al~----------------~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l 146 (438)
+..++.+|+.+++.|+|++|+.+|+++++ ++|. ..+|.++|.||+++|+|++|+.+|++++.+
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 44588999999999999999999999998 6676 899999999999999999999999999999
Q ss_pred CCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 013696 147 DDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 199 (438)
Q Consensus 147 ~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 199 (438)
+|+++.+|+++|.+|..+|++++|+.+|+++++++|++..++..+..+.....
T Consensus 303 ~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~ 355 (370)
T 1ihg_A 303 DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIK 355 (370)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888877776554
No 86
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.52 E-value=3.6e-14 Score=136.01 Aligned_cols=135 Identities=9% Similarity=0.011 Sum_probs=122.4
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~ 138 (438)
..|++++|+..|++++..+|++..+ +..+|.++...|++++|+..|.+++..+|+ ...+.+.+..+...+++.+|+.
T Consensus 129 ~~g~~~~A~~~~~~al~~~P~~~~a--~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~ 206 (287)
T 3qou_A 129 QESNYTDALPLLXDAWQLSNQNGEI--GLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQ 206 (287)
T ss_dssp HTTCHHHHHHHHHHHHHHTTSCHHH--HHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred hCCCHHHHHHHHHHHHHhCCcchhH--HHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHH
Confidence 6799999999999999999999888 669999999999999999999999999999 6667778888999999999999
Q ss_pred HHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--HHHHHHHHHHHH
Q 013696 139 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN--QEIKKQLAEVKS 196 (438)
Q Consensus 139 ~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~--~~~~~~l~~a~~ 196 (438)
.+++++.++|+++.+++.+|.++...|++++|+..|+++++++|++ ..++..+..+..
T Consensus 207 ~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~ 266 (287)
T 3qou_A 207 QLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILA 266 (287)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHH
T ss_pred HHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998 666555544433
No 87
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.52 E-value=7.8e-14 Score=111.60 Aligned_cols=105 Identities=20% Similarity=0.270 Sum_probs=100.1
Q ss_pred CCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCc--cHHHH
Q 013696 78 EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDR--YIKAY 154 (438)
Q Consensus 78 ~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~--~~~a~ 154 (438)
+|++..+ +..+|.+++..|+|++|+.+|.+++.++|. ..+++++|.+|..+|++++|+.++++++.++|. +..++
T Consensus 2 ~p~~~~~--~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 79 (112)
T 2kck_A 2 VDQNPEE--YYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVW 79 (112)
T ss_dssp CCSSTTG--GGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHH
T ss_pred CCCcHHH--HHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHH
Confidence 5667777 669999999999999999999999999998 999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHc-CCHHHHHHHHHHHHhhCCCC
Q 013696 155 SRRATARKEL-GKLKESIEDSEFALRLEPQN 184 (438)
Q Consensus 155 ~~lg~a~~~l-g~~~eA~~~~~~al~l~P~~ 184 (438)
+.+|.++..+ |++++|+.++++++...|.+
T Consensus 80 ~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 80 AAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 9999999999 99999999999999999975
No 88
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.52 E-value=9.2e-15 Score=149.10 Aligned_cols=162 Identities=12% Similarity=0.044 Sum_probs=104.1
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHH
Q 013696 11 DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKE 89 (438)
Q Consensus 11 ~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~ 89 (438)
.+...+...++|++++....+.+...+. ...+..+|..| ..|++++|+..|.+++..+|.+..+ +..
T Consensus 242 ~~~~~~~~~~~~~~A~~~~~~~l~~~~~----------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~ 309 (514)
T 2gw1_A 242 HTGIFKFLKNDPLGAHEDIKKAIELFPR----------VNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSV--YYH 309 (514)
T ss_dssp HHHHHHHHSSCHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHH--HHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhhCcc----------HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHH--HHH
Confidence 3455666677888888877777766541 11223344444 5666666666666666666666555 446
Q ss_pred HHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHH
Q 013696 90 LGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLK 168 (438)
Q Consensus 90 ~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~ 168 (438)
+|.++...|++++|+.+|.+++.++|. ..++.++|.+|...|++++|+..+.+++..+|+++.+++.+|.++...|+++
T Consensus 310 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 389 (514)
T 2gw1_A 310 RGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFD 389 (514)
T ss_dssp HHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHH
Confidence 666666666666666666666666666 6666666666666666666666666666666666666666666666666666
Q ss_pred HHHHHHHHHHhhCCCC
Q 013696 169 ESIEDSEFALRLEPQN 184 (438)
Q Consensus 169 eA~~~~~~al~l~P~~ 184 (438)
+|+..|++++.+.|.+
T Consensus 390 ~A~~~~~~a~~~~~~~ 405 (514)
T 2gw1_A 390 KALKQYDLAIELENKL 405 (514)
T ss_dssp HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhhhcc
Confidence 6666666666666655
No 89
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.52 E-value=3.3e-13 Score=110.89 Aligned_cols=115 Identities=25% Similarity=0.431 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcc-------HHHHH
Q 013696 84 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY-------IKAYS 155 (438)
Q Consensus 84 a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~-------~~a~~ 155 (438)
+..++.+|..++..|+|++|+.+|.+++..+|. +.++.++|.+|...|++++|+.+|.+++.++|.+ +.+++
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYA 83 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHH
Confidence 344789999999999999999999999999998 9999999999999999999999999999999887 99999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 013696 156 RRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 199 (438)
Q Consensus 156 ~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 199 (438)
++|.++..+|++++|+.+|++++.+.| ++.....+..+...+.
T Consensus 84 ~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~ 126 (131)
T 1elr_A 84 RIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILK 126 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 5777777776665443
No 90
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.51 E-value=2.1e-14 Score=124.74 Aligned_cols=113 Identities=12% Similarity=-0.020 Sum_probs=100.7
Q ss_pred hccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHH
Q 013696 97 QKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSE 175 (438)
Q Consensus 97 ~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~ 175 (438)
.+++-.+-..|.+++.++|+ +.+++++|.+++..|+|++|+..|++++.++|+++.+|+++|.++..+|+|++|+.+|+
T Consensus 15 l~~~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~ 94 (151)
T 3gyz_A 15 VIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYA 94 (151)
T ss_dssp HHHHHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 34444455678889999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCHHH----------HHHHHHHHHHHHHHHhhchhhh
Q 013696 176 FALRLEPQNQEI----------KKQLAEVKSLYEKEVFQKASKT 209 (438)
Q Consensus 176 ~al~l~P~~~~~----------~~~l~~a~~~~~ka~~~~~~~~ 209 (438)
+++.++|+++.+ .+++.+|...|++++.+.+..+
T Consensus 95 ~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 95 VAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 999999999887 4667788888988888775443
No 91
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.51 E-value=3.3e-14 Score=125.67 Aligned_cols=131 Identities=12% Similarity=0.023 Sum_probs=111.9
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCCHHHHHHHHHHH-HHhcCHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAY-LKLRRFQEAED 138 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~~~~~~~la~~~-~~l~~~~eA~~ 138 (438)
..|++++|+..|++++..+|++..+ +..+|.++...|++++|+.+|.+++..+|++..+..++.+. ...+...+|+.
T Consensus 18 ~~g~~~~A~~~~~~al~~~P~~~~a--~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~ 95 (176)
T 2r5s_A 18 QQGEHAQALNVIQTLSDELQSRGDV--KLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELK 95 (176)
T ss_dssp HTTCHHHHHHHHHTSCHHHHTSHHH--HHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HcCCHHHHHHHHHHHHHHCCCcHHH--HHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHH
Confidence 7899999999999999999999988 77999999999999999999999999998644444445443 23344556899
Q ss_pred HHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--HHHHHHHH
Q 013696 139 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN--QEIKKQLA 192 (438)
Q Consensus 139 ~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~--~~~~~~l~ 192 (438)
.+++++.++|+++.+++.+|.++...|++++|+..|+++++++|+. ..++..+.
T Consensus 96 ~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~ 151 (176)
T 2r5s_A 96 RLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFM 151 (176)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHH
Confidence 9999999999999999999999999999999999999999999975 33544433
No 92
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.50 E-value=5.5e-14 Score=143.30 Aligned_cols=166 Identities=17% Similarity=0.095 Sum_probs=97.8
Q ss_pred HHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHH
Q 013696 14 GFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGN 92 (438)
Q Consensus 14 ~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~ 92 (438)
..+..+++|++++....+.+...+. ....+..+|..| ..|++++|+..|.+++...|.+..+ +..+|.
T Consensus 312 ~~~~~~~~~~~A~~~~~~~~~~~~~---------~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~la~ 380 (514)
T 2gw1_A 312 QMNFILQNYDQAGKDFDKAKELDPE---------NIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEV--PNFFAE 380 (514)
T ss_dssp HHHHHTTCTTHHHHHHHHHHHTCSS---------CSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHH--HHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHhChh---------hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHH--HHHHHH
Confidence 3444445555555555555543321 111222333334 5566666666666666666665555 446666
Q ss_pred HHHHhccHHHHHHHHHHHhccCCC-HH------HHHHHHHHHHH---hcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHH
Q 013696 93 ECFKQKKFKEAIDCYSRSIALSPT-AV------AYANRAMAYLK---LRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 162 (438)
Q Consensus 93 ~~~~~g~y~~Ai~~y~~al~~~p~-~~------~~~~la~~~~~---l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~ 162 (438)
++...|++++|+.+|.+++.++|. .. ++.++|.+|.. .|++++|+..|++++.++|+++.+++.+|.++.
T Consensus 381 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 460 (514)
T 2gw1_A 381 ILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKL 460 (514)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 666666666666666666666554 22 66666666666 666666666666666666666666666666666
Q ss_pred HcCCHHHHHHHHHHHHhhCCCCHHHHHH
Q 013696 163 ELGKLKESIEDSEFALRLEPQNQEIKKQ 190 (438)
Q Consensus 163 ~lg~~~eA~~~~~~al~l~P~~~~~~~~ 190 (438)
.+|++++|+..|++++.++|+++.++..
T Consensus 461 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 488 (514)
T 2gw1_A 461 QQEDIDEAITLFEESADLARTMEEKLQA 488 (514)
T ss_dssp HTTCHHHHHHHHHHHHHHCSSHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhccccHHHHHH
Confidence 6666666666666666666666655443
No 93
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.50 E-value=1.1e-13 Score=119.30 Aligned_cols=119 Identities=13% Similarity=0.128 Sum_probs=107.6
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~ 138 (438)
..|++++|+..|.+++..+|.+..+ +..+|.+++..|+|++|+.+|.+++.++|. +.+++++|.+|..+|++++|+.
T Consensus 25 ~~~~~~~A~~~~~~al~~~~~~~~~--~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 102 (166)
T 1a17_A 25 KAKDYENAIKFYSQAIELNPSNAIY--YGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALR 102 (166)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhCCCChHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHH
Confidence 7899999999999999999998877 779999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHhhcCCccHHHHHHHHHH--HHHcCCHHHHHHHHHHHHhh
Q 013696 139 DCTEALNLDDRYIKAYSRRATA--RKELGKLKESIEDSEFALRL 180 (438)
Q Consensus 139 ~~~~al~l~p~~~~a~~~lg~a--~~~lg~~~eA~~~~~~al~l 180 (438)
+|.+++.++|.+..++..++.+ +...|++++|+..+.++..+
T Consensus 103 ~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 103 DYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 9999999999999888555544 77888888888888765443
No 94
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.50 E-value=1e-12 Score=106.76 Aligned_cols=111 Identities=34% Similarity=0.488 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHH
Q 013696 85 TSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKE 163 (438)
Q Consensus 85 ~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~ 163 (438)
..+..+|.+++..|++++|+.+|.+++..+|. ..+++++|.++...|++++|+..+.+++.++|.++.+++.+|.++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 89 (125)
T 1na0_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK 89 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH
Confidence 34789999999999999999999999999998 89999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 013696 164 LGKLKESIEDSEFALRLEPQNQEIKKQLAEVK 195 (438)
Q Consensus 164 lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~ 195 (438)
.|++++|+..|++++.++|.+..+...+..+.
T Consensus 90 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 121 (125)
T 1na0_A 90 QGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 121 (125)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 99999999999999999999998877666554
No 95
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.49 E-value=8.3e-14 Score=120.89 Aligned_cols=94 Identities=19% Similarity=0.129 Sum_probs=83.4
Q ss_pred HHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCH----------HHHHHHHHHHhhcCCccHHHHHHHHHHHHH
Q 013696 95 FKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRF----------QEAEDDCTEALNLDDRYIKAYSRRATARKE 163 (438)
Q Consensus 95 ~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~----------~eA~~~~~~al~l~p~~~~a~~~lg~a~~~ 163 (438)
-+.+.|++|+.+|.++++++|+ +.+|+++|.++..++++ ++|+..|++||.++|++..+|+++|.+|..
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 3567788999999999999998 88999999999888775 599999999999999999999999999998
Q ss_pred cC-----------CHHHHHHHHHHHHhhCCCCHHHH
Q 013696 164 LG-----------KLKESIEDSEFALRLEPQNQEIK 188 (438)
Q Consensus 164 lg-----------~~~eA~~~~~~al~l~P~~~~~~ 188 (438)
+| ++++|+.+|++|+.++|++...+
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~ 128 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYL 128 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHH
Confidence 85 89999999999999999987553
No 96
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.49 E-value=4.1e-14 Score=132.03 Aligned_cols=131 Identities=18% Similarity=0.122 Sum_probs=115.1
Q ss_pred cCCCCCCcC-cCCCccchHHHHHhhhcCC-----CC-ChhHHHHHHHHHHHHHhccHHHHHHHHHHHhcc--------CC
Q 013696 51 AKKPSPSGN-SYSRNYDPVSHISSSLMNE-----ES-TPDATSEKELGNECFKQKKFKEAIDCYSRSIAL--------SP 115 (438)
Q Consensus 51 ~~~~~~~~y-~~g~~~eAi~~~~~al~~~-----p~-~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~--------~p 115 (438)
.+..+|..| ..|++++|+..|.+++... ++ ...+..+..+|.+|...|+|++|+.+|.+++.+ +|
T Consensus 45 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 124 (283)
T 3edt_B 45 MLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHP 124 (283)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 345566666 8999999999999999863 22 233455889999999999999999999999998 35
Q ss_pred C-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhc--------CCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 013696 116 T-AVAYANRAMAYLKLRRFQEAEDDCTEALNL--------DDRYIKAYSRRATARKELGKLKESIEDSEFALRLE 181 (438)
Q Consensus 116 ~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l--------~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~ 181 (438)
. ..++.++|.+|..+|++++|+..|.+++.+ .|....++..+|.++..+|++++|+..|++++.+.
T Consensus 125 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~ 199 (283)
T 3edt_B 125 DVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRA 199 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 5 889999999999999999999999999999 78888999999999999999999999999999873
No 97
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.49 E-value=7.6e-14 Score=136.99 Aligned_cols=119 Identities=15% Similarity=0.140 Sum_probs=109.1
Q ss_pred cCCCccchHHHHHhhhcCCCCChh-------------HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPD-------------ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAM 125 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~-------------a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~ 125 (438)
..|++++|+..|.+++.++|.+.. +..+.++|.+|++.|+|++|+.+|.++++++|+ +.+|+++|.
T Consensus 159 ~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 238 (336)
T 1p5q_A 159 KEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGE 238 (336)
T ss_dssp HHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 779999999999999999998831 234789999999999999999999999999999 999999999
Q ss_pred HHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHH-HHHHHHHH
Q 013696 126 AYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKES-IEDSEFAL 178 (438)
Q Consensus 126 ~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA-~~~~~~al 178 (438)
+|..+|+|++|+.+|++++.++|++..++..+|.++..+|++++| ...|.+++
T Consensus 239 ~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 239 AHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMF 292 (336)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988 44555554
No 98
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.47 E-value=4.1e-14 Score=139.06 Aligned_cols=111 Identities=31% Similarity=0.464 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-H-----------------HHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 013696 84 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-A-----------------VAYANRAMAYLKLRRFQEAEDDCTEALN 145 (438)
Q Consensus 84 a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~-----------------~~~~~la~~~~~l~~~~eA~~~~~~al~ 145 (438)
+..++.+|+.++..|+|++|+.+|.+++.+.|. . .+|+++|.||+++|+|++|+.+|++++.
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 444889999999999999999999999999998 4 3899999999999999999999999999
Q ss_pred cCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 013696 146 LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (438)
Q Consensus 146 l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a 194 (438)
++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++..++..+..+
T Consensus 259 ~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l 307 (338)
T 2if4_A 259 EEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRAL 307 (338)
T ss_dssp HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998886666544
No 99
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.47 E-value=5.1e-13 Score=120.58 Aligned_cols=123 Identities=25% Similarity=0.252 Sum_probs=109.7
Q ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHH
Q 013696 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 162 (438)
Q Consensus 83 ~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~ 162 (438)
.+..++.+|..++..|+|++|+.+|.+++ +|.+.+++++|.+|..+|++++|+.+|.+++.++|+++.+|+++|.++.
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~ 82 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQ--DPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYY 82 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 34457899999999999999999999995 5568899999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhhCCCCH----------------HH----------HHHHHHHHHHHHHHHhhchh
Q 013696 163 ELGKLKESIEDSEFALRLEPQNQ----------------EI----------KKQLAEVKSLYEKEVFQKAS 207 (438)
Q Consensus 163 ~lg~~~eA~~~~~~al~l~P~~~----------------~~----------~~~l~~a~~~~~ka~~~~~~ 207 (438)
.+|++++|+.+|++++.+.|.+. .+ .+++.+|...|.+++...+.
T Consensus 83 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 153 (213)
T 1hh8_A 83 QTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSE 153 (213)
T ss_dssp HTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS
T ss_pred HcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcc
Confidence 99999999999999999998866 44 35667788888888777643
No 100
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.47 E-value=4.1e-14 Score=145.75 Aligned_cols=133 Identities=14% Similarity=0.135 Sum_probs=118.8
Q ss_pred cCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHH
Q 013696 51 AKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYL 128 (438)
Q Consensus 51 ~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~ 128 (438)
.+...|..| ..|++++|+..|++++.++|.+..+ +..+|.+|+..|+|++|+.+|+++++++|. +.+|+++|.+|.
T Consensus 8 ~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~--~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~ 85 (477)
T 1wao_1 8 ELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIY--YGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 85 (477)
T ss_dssp TSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 456677777 8999999999999999999998877 779999999999999999999999999999 999999999999
Q ss_pred HhcCHHHHHHHHHHHhhcCCccHHHHHHHHHH--HHHcCCHHHHHHHHH-----------HHHhhCCCCH
Q 013696 129 KLRRFQEAEDDCTEALNLDDRYIKAYSRRATA--RKELGKLKESIEDSE-----------FALRLEPQNQ 185 (438)
Q Consensus 129 ~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a--~~~lg~~~eA~~~~~-----------~al~l~P~~~ 185 (438)
.+|++++|+.+|++++.++|++..++..+|.+ +...|++++|+..++ +++.++|...
T Consensus 86 ~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~ 155 (477)
T 1wao_1 86 ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYS 155 (477)
T ss_dssp HHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCC
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhcccccccc
Confidence 99999999999999999999999999999998 888999999999999 8888887653
No 101
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.46 E-value=3e-13 Score=129.25 Aligned_cols=99 Identities=36% Similarity=0.556 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHc
Q 013696 86 SEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKEL 164 (438)
Q Consensus 86 ~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~l 164 (438)
.++.+|+.++..|+|++|+.+|.+++.++|. +.+|+++|.+|..+|+|++|+.+|++++.++|+++.+++++|.+|..+
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 85 (281)
T 2c2l_A 6 ELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEM 85 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 3789999999999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhCCCC
Q 013696 165 GKLKESIEDSEFALRLEPQN 184 (438)
Q Consensus 165 g~~~eA~~~~~~al~l~P~~ 184 (438)
|++++|+.+|++++.++|++
T Consensus 86 g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 86 ESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp TCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhCccc
Confidence 99999999999999999976
No 102
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.46 E-value=1.8e-13 Score=113.54 Aligned_cols=103 Identities=17% Similarity=0.137 Sum_probs=97.4
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~ 138 (438)
..|++++|+..|.+++..+|++..+ +..+|.+++..|+|++|+.+|.++++++|+ +.+|+++|.+|..+|++++|+.
T Consensus 16 ~~~~~~~A~~~~~~al~~~p~~~~~--~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~ 93 (126)
T 3upv_A 16 TKSDWPNAVKAYTEMIKRAPEDARG--YSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALE 93 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHH--HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhCHHHHHH
Confidence 7899999999999999999999888 779999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHhhcC------CccHHHHHHHHHHHHHc
Q 013696 139 DCTEALNLD------DRYIKAYSRRATARKEL 164 (438)
Q Consensus 139 ~~~~al~l~------p~~~~a~~~lg~a~~~l 164 (438)
+|++++.++ |.+..++..++.+...+
T Consensus 94 ~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 94 TLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 999999999 99999998888877653
No 103
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.45 E-value=1.1e-13 Score=131.46 Aligned_cols=171 Identities=15% Similarity=0.123 Sum_probs=134.2
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCC------CCCh
Q 013696 10 LDFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNE------ESTP 82 (438)
Q Consensus 10 ~~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~------p~~~ 82 (438)
..+...+...++|++++....+.+....... ....+.....+..+|..| ..|++++|+.+|.+++... ....
T Consensus 31 ~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 109 (311)
T 3nf1_A 31 HNLVIQYASQGRYEVAVPLCKQALEDLEKTS-GHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPA 109 (311)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH-CSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChH
Confidence 3455666677788888887777665321000 000112223344566666 8899999999999999862 2223
Q ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHhccC--------CC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhc-------
Q 013696 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALS--------PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNL------- 146 (438)
Q Consensus 83 ~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~--------p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l------- 146 (438)
.+..+..+|.+|...|++++|+.+|.+++.+. |. ..++.++|.+|...|++++|+.++++++.+
T Consensus 110 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 189 (311)
T 3nf1_A 110 VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGP 189 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCC
Confidence 34558899999999999999999999999984 33 788999999999999999999999999998
Q ss_pred -CCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 013696 147 -DDRYIKAYSRRATARKELGKLKESIEDSEFALRLE 181 (438)
Q Consensus 147 -~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~ 181 (438)
.|....+++.+|.++..+|++++|+..|++++.+.
T Consensus 190 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 225 (311)
T 3nf1_A 190 DDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRA 225 (311)
T ss_dssp TCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 77888999999999999999999999999999864
No 104
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.45 E-value=1.2e-12 Score=126.26 Aligned_cols=138 Identities=9% Similarity=0.010 Sum_probs=122.6
Q ss_pred cchHHHHHhhhc-CCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HH-HHHHHHHHHHHhcCHHHHHHHHH
Q 013696 65 YDPVSHISSSLM-NEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AV-AYANRAMAYLKLRRFQEAEDDCT 141 (438)
Q Consensus 65 ~eAi~~~~~al~-~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~-~~~~la~~~~~l~~~~eA~~~~~ 141 (438)
++|+..|++++. ++|++..+ |..+|..+...|++++|+..|++++++.|. +. +|.++|.++...|++++|+..|+
T Consensus 81 ~~A~~~~~rAl~~~~p~~~~~--~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 158 (308)
T 2ond_A 81 DEAANIYERAISTLLKKNMLL--YFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFK 158 (308)
T ss_dssp HHHHHHHHHHHTTTTTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHH--HHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 899999999999 79988877 779999999999999999999999999998 65 89999999999999999999999
Q ss_pred HHhhcCCccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCCHHHH----------HHHHHHHHHHHHHHhh
Q 013696 142 EALNLDDRYIKAYSRRATARKE-LGKLKESIEDSEFALRLEPQNQEIK----------KQLAEVKSLYEKEVFQ 204 (438)
Q Consensus 142 ~al~l~p~~~~a~~~lg~a~~~-lg~~~eA~~~~~~al~l~P~~~~~~----------~~l~~a~~~~~ka~~~ 204 (438)
+|+..+|.+..+|...|..... +|++++|+..|+++++++|+++.++ +++.+|...|++++..
T Consensus 159 ~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 159 KAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp HHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 9999999998888877766443 7999999999999999999998774 4556677777777664
No 105
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.44 E-value=1.6e-13 Score=113.40 Aligned_cols=113 Identities=17% Similarity=0.157 Sum_probs=104.5
Q ss_pred CCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHH
Q 013696 52 KKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLK 129 (438)
Q Consensus 52 ~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~ 129 (438)
+..+|..| ..|++++|+..|++++..+|.+..+ +..+|.+++..|++++|+.+|.+++.++|. +.+++++|.+|..
T Consensus 19 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~--~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 96 (133)
T 2lni_A 19 VKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKL--YSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEA 96 (133)
T ss_dssp HHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHH--HHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHH--HHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 34445555 8899999999999999999988777 779999999999999999999999999998 9999999999999
Q ss_pred hcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCC
Q 013696 130 LRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGK 166 (438)
Q Consensus 130 l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~ 166 (438)
+|++++|+.+|.+++.++|.+..++..+|.++..+|+
T Consensus 97 ~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 97 MKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp TTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999998875
No 106
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.44 E-value=2.2e-12 Score=105.87 Aligned_cols=119 Identities=32% Similarity=0.434 Sum_probs=106.4
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcC
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG 165 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg 165 (438)
++.+|..++..|++++|+..|.+++..+|. ..++.++|.++...|++++|+..+.+++..+|.++.+++.+|.++...|
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQG 83 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhc
Confidence 678999999999999999999999999998 8899999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHH----------HHHHHHHHHHHHHhhc
Q 013696 166 KLKESIEDSEFALRLEPQNQEIKK----------QLAEVKSLYEKEVFQK 205 (438)
Q Consensus 166 ~~~eA~~~~~~al~l~P~~~~~~~----------~l~~a~~~~~ka~~~~ 205 (438)
++++|+..+++++.+.|.+..++. ++.+|...+.+++...
T Consensus 84 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 133 (136)
T 2fo7_A 84 DYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD 133 (136)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccC
Confidence 999999999999999999877633 3445555555555443
No 107
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.44 E-value=4.1e-13 Score=125.17 Aligned_cols=146 Identities=23% Similarity=0.256 Sum_probs=122.4
Q ss_pred cCCCccchHHHHHhhhcCC-----CC-ChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccC--------CC-HHHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNE-----ES-TPDATSEKELGNECFKQKKFKEAIDCYSRSIALS--------PT-AVAYANRA 124 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~-----p~-~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~--------p~-~~~~~~la 124 (438)
..|++++|+.+|++++... ++ ...+..+..+|.+|+..|+|++|+.+|.+++.+. |. ..++.++|
T Consensus 13 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~ 92 (283)
T 3edt_B 13 GLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLA 92 (283)
T ss_dssp CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 6788999999999999842 12 2234458899999999999999999999999883 44 78899999
Q ss_pred HHHHHhcCHHHHHHHHHHHhhc--------CCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCHHH-
Q 013696 125 MAYLKLRRFQEAEDDCTEALNL--------DDRYIKAYSRRATARKELGKLKESIEDSEFALRL--------EPQNQEI- 187 (438)
Q Consensus 125 ~~~~~l~~~~eA~~~~~~al~l--------~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l--------~P~~~~~- 187 (438)
.+|..+|++++|+.+|.+++.+ +|....+++++|.++..+|++++|+.+|++++.+ .|....+
T Consensus 93 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 172 (283)
T 3edt_B 93 VLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTK 172 (283)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 9999999999999999999988 5778899999999999999999999999999999 5544443
Q ss_pred ---------HHHHHHHHHHHHHHHhhc
Q 013696 188 ---------KKQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 188 ---------~~~l~~a~~~~~ka~~~~ 205 (438)
.+++.+|...|.+++...
T Consensus 173 ~~la~~~~~~g~~~~A~~~~~~~l~~~ 199 (283)
T 3edt_B 173 NNLASCYLKQGKYQDAETLYKEILTRA 199 (283)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 455667777777776654
No 108
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.44 E-value=2.6e-13 Score=111.55 Aligned_cols=102 Identities=15% Similarity=0.141 Sum_probs=84.0
Q ss_pred HhccHHHHHHHHHHHhcc---CCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHH
Q 013696 96 KQKKFKEAIDCYSRSIAL---SPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESI 171 (438)
Q Consensus 96 ~~g~y~~Ai~~y~~al~~---~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~ 171 (438)
..|+|++|+.+|.+++.+ +|. +.+++++|.+|..+|+|++|+.+|++++.++|+++.+++++|.++..+|++++|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 368889999999999998 476 8889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 013696 172 EDSEFALRLEPQNQEIKKQLAEVKSLY 198 (438)
Q Consensus 172 ~~~~~al~l~P~~~~~~~~l~~a~~~~ 198 (438)
..|++++.+.|+++.+. .+..++..|
T Consensus 82 ~~~~~al~~~p~~~~~~-~~~~ai~~~ 107 (117)
T 3k9i_A 82 ELLLKIIAETSDDETIQ-SYKQAILFY 107 (117)
T ss_dssp HHHHHHHHHHCCCHHHH-HTHHHHHHH
T ss_pred HHHHHHHHhCCCcHHHH-HHHHHHHHH
Confidence 99999999999987654 233444444
No 109
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.44 E-value=7.6e-14 Score=121.58 Aligned_cols=107 Identities=8% Similarity=0.114 Sum_probs=98.0
Q ss_pred CCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHh
Q 013696 53 KPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL 130 (438)
Q Consensus 53 ~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l 130 (438)
...|..| ..|+|++|+..|.+++.++|.+..+ +..+|.+|+..|+|++|+.+|.+++.++|+ ..+|+++|.+|..+
T Consensus 15 ~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 92 (164)
T 3sz7_A 15 KSEGNAAMARKEYSKAIDLYTQALSIAPANPIY--LSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDM 92 (164)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHH--HHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 3344455 8899999999999999999998887 779999999999999999999999999999 99999999999999
Q ss_pred cCHHHHHHHHHHHhhcCCccHHHHHHHHHHH
Q 013696 131 RRFQEAEDDCTEALNLDDRYIKAYSRRATAR 161 (438)
Q Consensus 131 ~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~ 161 (438)
|++++|+.+|.+++.++|++..+|+.++.+.
T Consensus 93 g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~ 123 (164)
T 3sz7_A 93 ADYKGAKEAYEKGIEAEGNGGSDAMKRGLET 123 (164)
T ss_dssp TCHHHHHHHHHHHHHHHSSSCCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 9999999999999999999999888877543
No 110
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.44 E-value=8.7e-13 Score=127.23 Aligned_cols=174 Identities=12% Similarity=-0.041 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChh-HHHHHHHHHHHHHhccH
Q 013696 23 DLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPD-ATSEKELGNECFKQKKF 100 (438)
Q Consensus 23 e~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~-a~~~~~~g~~~~~~g~y 100 (438)
++++...++++....|. ....+...|..+ ..|++++|+..|++++.+.|.+.. + |..+|..+...|++
T Consensus 81 ~~A~~~~~rAl~~~~p~--------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~--~~~~~~~~~~~~~~ 150 (308)
T 2ond_A 81 DEAANIYERAISTLLKK--------NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLV--YIQYMKFARRAEGI 150 (308)
T ss_dssp HHHHHHHHHHHTTTTTT--------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHH--HHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHhCcc--------cHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHH--HHHHHHHHHHhcCH
Confidence 66666777777632211 111222333334 789999999999999999998876 5 77999999999999
Q ss_pred HHHHHHHHHHhccCCC-HHHHHHHHHHHHH-hcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 013696 101 KEAIDCYSRSIALSPT-AVAYANRAMAYLK-LRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFAL 178 (438)
Q Consensus 101 ~~Ai~~y~~al~~~p~-~~~~~~la~~~~~-l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al 178 (438)
++|+..|.++++..|. ..+|...|.+... .|++++|+..|++++.++|+++.+|..+|..+..+|++++|+..|++++
T Consensus 151 ~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al 230 (308)
T 2ond_A 151 KSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVL 230 (308)
T ss_dssp HHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 9999999999999998 7777777666443 7999999999999999999999999999999999999999999999999
Q ss_pred hh---CCC-CHHHH----------HHHHHHHHHHHHHHhhch
Q 013696 179 RL---EPQ-NQEIK----------KQLAEVKSLYEKEVFQKA 206 (438)
Q Consensus 179 ~l---~P~-~~~~~----------~~l~~a~~~~~ka~~~~~ 206 (438)
.. .|+ ...++ +.+..|...+.+++...+
T Consensus 231 ~~~~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~~~~p 272 (308)
T 2ond_A 231 TSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFR 272 (308)
T ss_dssp HSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTT
T ss_pred hccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcc
Confidence 96 553 44443 334556666666665543
No 111
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.43 E-value=3.7e-13 Score=136.41 Aligned_cols=181 Identities=15% Similarity=0.066 Sum_probs=137.4
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC---cCCCccchHHHHHhhhcCCCCChhHHHH
Q 013696 11 DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN---SYSRNYDPVSHISSSLMNEESTPDATSE 87 (438)
Q Consensus 11 ~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y---~~g~~~eAi~~~~~al~~~p~~~~a~~~ 87 (438)
.+...+..+++|++++...++.+...+.... .............|.++ ..++|++|+.+|++++.++|+++.+ +
T Consensus 99 nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~--~ 175 (472)
T 4g1t_A 99 NYAWVYYHMGRLSDVQIYVDKVKHVCEKFSS-PYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEF--T 175 (472)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-SSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHH--H
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHHhHhccc-ccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHH--H
Confidence 3455667788888888877766543320000 00000011111222222 4567999999999999999999988 5
Q ss_pred HHHHHHHHHh---ccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHh----cCHHHHHHHHHHHhhcCCccHHHHHHHHH
Q 013696 88 KELGNECFKQ---KKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL----RRFQEAEDDCTEALNLDDRYIKAYSRRAT 159 (438)
Q Consensus 88 ~~~g~~~~~~---g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l----~~~~eA~~~~~~al~l~p~~~~a~~~lg~ 159 (438)
..+|.+++.. +++++|+..|.++++++|. +.++.++|.++..+ +++++|+..+++++.++|.++.++.++|.
T Consensus 176 ~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~ 255 (472)
T 4g1t_A 176 SGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAK 255 (472)
T ss_dssp HHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHH
Confidence 5888886654 6678999999999999999 88898888777654 57889999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 013696 160 ARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (438)
Q Consensus 160 a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a 194 (438)
+|...|++++|+..|+++++++|++..++..++.+
T Consensus 256 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 290 (472)
T 4g1t_A 256 FYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCC 290 (472)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHH
Confidence 99999999999999999999999999887666544
No 112
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.42 E-value=2.9e-13 Score=134.20 Aligned_cols=164 Identities=9% Similarity=0.036 Sum_probs=128.5
Q ss_pred HHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCCh-----hHHHHHH
Q 013696 16 LNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTP-----DATSEKE 89 (438)
Q Consensus 16 ~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~-----~a~~~~~ 89 (438)
+-..++|++++....+.+...... .........+..+|..| ..|++++|+.++.+++.+.+... .+..+..
T Consensus 113 ~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 189 (383)
T 3ulq_A 113 ELDQREYLSAIKFFKKAESKLIFV---KDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSL 189 (383)
T ss_dssp HHHTTCHHHHHHHHHHHHTTGGGC---CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHhhC---CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHH
Confidence 344567778888777777543211 01111223445666666 88999999999999998754432 2455889
Q ss_pred HHHHHHHhccHHHHHHHHHHHhccCCC-------HHHHHHHHHHHHHhcCHHHHHHHHHHHhh-----cC-CccHHHHHH
Q 013696 90 LGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYLKLRRFQEAEDDCTEALN-----LD-DRYIKAYSR 156 (438)
Q Consensus 90 ~g~~~~~~g~y~~Ai~~y~~al~~~p~-------~~~~~~la~~~~~l~~~~eA~~~~~~al~-----l~-p~~~~a~~~ 156 (438)
+|.+|...|+|++|+.+|.+++.+.+. +.++.++|.+|..+|++++|+.++.+++. .+ |..+.++++
T Consensus 190 lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 269 (383)
T 3ulq_A 190 FATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFL 269 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Confidence 999999999999999999999987543 56899999999999999999999999998 56 888899999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCC
Q 013696 157 RATARKELGKLKESIEDSEFALRLEP 182 (438)
Q Consensus 157 lg~a~~~lg~~~eA~~~~~~al~l~P 182 (438)
+|.++..+|++++|+.++++++.+.+
T Consensus 270 l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 270 ITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998854
No 113
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.42 E-value=2.2e-13 Score=138.13 Aligned_cols=197 Identities=14% Similarity=0.018 Sum_probs=143.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCC------hhH
Q 013696 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEEST------PDA 84 (438)
Q Consensus 12 l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~------~~a 84 (438)
++.+...+++++++++...+++...+........+.....+..+|..| .+|++++|+.+|++++.+.+.. ..+
T Consensus 57 Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~ 136 (472)
T 4g1t_A 57 LAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESP 136 (472)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhH
Confidence 455666677888888887777653321111111111122234456666 8999999999999998753211 123
Q ss_pred HHHHHHHHHHHHh--ccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHh---cCHHHHHHHHHHHhhcCCccHHHHHHHH
Q 013696 85 TSEKELGNECFKQ--KKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL---RRFQEAEDDCTEALNLDDRYIKAYSRRA 158 (438)
Q Consensus 85 ~~~~~~g~~~~~~--g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l---~~~~eA~~~~~~al~l~p~~~~a~~~lg 158 (438)
..+..+|+++... ++|++|+.+|+++++++|+ +.++.++|.++..+ +++++|+..+++++.++|+++.++..+|
T Consensus 137 ~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~ 216 (472)
T 4g1t_A 137 ELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLA 216 (472)
T ss_dssp HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHH
Confidence 3366788777664 5799999999999999999 99999999886654 6778999999999999999999999999
Q ss_pred HHHHHc----CCHHHHHHHHHHHHhhCCCCHHHH----------HHHHHHHHHHHHHHhhchhh
Q 013696 159 TARKEL----GKLKESIEDSEFALRLEPQNQEIK----------KQLAEVKSLYEKEVFQKASK 208 (438)
Q Consensus 159 ~a~~~l----g~~~eA~~~~~~al~l~P~~~~~~----------~~l~~a~~~~~ka~~~~~~~ 208 (438)
.++..+ |++++|+..|++++.++|.+..++ +.+.+|...|.+++...+..
T Consensus 217 ~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 280 (472)
T 4g1t_A 217 LKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNN 280 (472)
T ss_dssp HHHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCh
Confidence 877665 577899999999999999998874 45567777788777766543
No 114
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.42 E-value=1.2e-13 Score=133.57 Aligned_cols=170 Identities=9% Similarity=0.029 Sum_probs=132.8
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCC----hhHHH
Q 013696 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEEST----PDATS 86 (438)
Q Consensus 12 l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~----~~a~~ 86 (438)
....+...++|++++....+.+....... ........+..+|..| .+|++++|+.+|++++.+.+.. ..+..
T Consensus 42 a~~~~~~~g~~~~A~~~~~~al~~~~~~~---~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~ 118 (307)
T 2ifu_A 42 AAVAFKNAKQLEQAKDAYLQEAEAHANNR---SLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMA 118 (307)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 34556667788888887777665442110 1111222345566677 7899999999999999874322 22456
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhccCCC-------HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcc------HHH
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKA 153 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-------~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~------~~a 153 (438)
+.++|.+|.. |+|++|+.+|++++.+.|. ..++.++|.+|..+|+|++|+.+|++++.+.|.+ ..+
T Consensus 119 ~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 197 (307)
T 2ifu_A 119 LDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKK 197 (307)
T ss_dssp HHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHH
Confidence 8899999998 9999999999999998753 5789999999999999999999999999986643 357
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Q 013696 154 YSRRATARKELGKLKESIEDSEFALRLEPQNQE 186 (438)
Q Consensus 154 ~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~ 186 (438)
++.+|.++..+|++++|+.+|++++ ++|....
T Consensus 198 ~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~ 229 (307)
T 2ifu_A 198 CIAQVLVQLHRADYVAAQKCVRESY-SIPGFSG 229 (307)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCC
Confidence 8899999999999999999999999 9997653
No 115
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.41 E-value=1.4e-12 Score=106.98 Aligned_cols=106 Identities=18% Similarity=0.134 Sum_probs=101.7
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~ 138 (438)
..|++++|+..|.+++..+|.+..+ +..+|.+++..|++++|+.+|.+++..+|. ..+++++|.+|..+|++++|+.
T Consensus 24 ~~~~~~~A~~~~~~~~~~~~~~~~~--~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 101 (131)
T 2vyi_A 24 KVENFEAAVHFYGKAIELNPANAVY--FCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVA 101 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HccCHHHHHHHHHHHHHcCCCCHHH--HHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHH
Confidence 7799999999999999999988777 779999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHhhcCCccHHHHHHHHHHHHHcCCH
Q 013696 139 DCTEALNLDDRYIKAYSRRATARKELGKL 167 (438)
Q Consensus 139 ~~~~al~l~p~~~~a~~~lg~a~~~lg~~ 167 (438)
++.+++.++|++..++..+|.++..+|++
T Consensus 102 ~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 102 YYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999986
No 116
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.41 E-value=4.6e-13 Score=120.32 Aligned_cols=125 Identities=13% Similarity=0.089 Sum_probs=105.8
Q ss_pred CCCcC-cCCCccchHHHHHhhhcCCCCChh--------------HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HH
Q 013696 55 SPSGN-SYSRNYDPVSHISSSLMNEESTPD--------------ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AV 118 (438)
Q Consensus 55 ~~~~y-~~g~~~eAi~~~~~al~~~p~~~~--------------a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~ 118 (438)
.|..| ..|+|++|+..|.+++...|.++. ...+..+|.+|+..|+|++|+.+|.+++.++|. ..
T Consensus 44 ~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~ 123 (198)
T 2fbn_A 44 EGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVK 123 (198)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHH
Confidence 34444 889999999999999999888761 234789999999999999999999999999998 99
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHH-HHHHHHHh
Q 013696 119 AYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESI-EDSEFALR 179 (438)
Q Consensus 119 ~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~-~~~~~al~ 179 (438)
+++++|.+|..+|+|++|+.+|.+++.++|++..++..++.++..+|++.++. ..|.+.+.
T Consensus 124 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 124 ALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC-----------
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999988877 44544443
No 117
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.40 E-value=2.3e-13 Score=118.32 Aligned_cols=111 Identities=14% Similarity=0.069 Sum_probs=97.1
Q ss_pred CCcC-cCCCccchHHHHHhhhcC------------------CCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC
Q 013696 56 PSGN-SYSRNYDPVSHISSSLMN------------------EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT 116 (438)
Q Consensus 56 ~~~y-~~g~~~eAi~~~~~al~~------------------~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~ 116 (438)
|..| ..|+|++|+..|.+++.+ +|....+ +.++|.+|++.|+|++|+.+|.+++.++|.
T Consensus 18 G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~nla~~~~~~~~~~~A~~~~~~al~~~p~ 95 (162)
T 3rkv_A 18 GNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPL--YANMSQCYLNIGDLHEAEETSSEVLKREET 95 (162)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHH--HHHHHHHHHhcCcHHHHHHHHHHHHhcCCc
Confidence 4444 889999999999999998 4444445 789999999999999999999999999999
Q ss_pred -HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccH-HHHHHHHHHHHHcCCHH
Q 013696 117 -AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYI-KAYSRRATARKELGKLK 168 (438)
Q Consensus 117 -~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~-~a~~~lg~a~~~lg~~~ 168 (438)
+.+|+++|.+|..+|+|++|+.+|.+++.++|++. .+...++.+...++++.
T Consensus 96 ~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~ 149 (162)
T 3rkv_A 96 NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKK 149 (162)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 66777777776665443
No 118
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.40 E-value=5.4e-13 Score=114.95 Aligned_cols=104 Identities=13% Similarity=0.066 Sum_probs=95.3
Q ss_pred HHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 013696 104 IDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEP 182 (438)
Q Consensus 104 i~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P 182 (438)
-..|.+++.++|. ..+++++|.+++..|+|++|+..|++++.++|+++.+|+.+|.++..+|++++|+.+|++++.++|
T Consensus 7 ~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 86 (148)
T 2vgx_A 7 GGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDI 86 (148)
T ss_dssp CCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred hhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 3568899999998 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHH----------HHHHHHHHHHHHHHHhhchh
Q 013696 183 QNQEI----------KKQLAEVKSLYEKEVFQKAS 207 (438)
Q Consensus 183 ~~~~~----------~~~l~~a~~~~~ka~~~~~~ 207 (438)
+++.+ .+++.+|...|.+++.+.+.
T Consensus 87 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 121 (148)
T 2vgx_A 87 XEPRFPFHAAECLLQXGELAEAESGLFLAQELIAN 121 (148)
T ss_dssp TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred CCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC
Confidence 99877 45567888888888887654
No 119
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.39 E-value=5.8e-13 Score=126.31 Aligned_cols=172 Identities=17% Similarity=0.163 Sum_probs=133.6
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCC-----CC-Chh
Q 013696 11 DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNE-----ES-TPD 83 (438)
Q Consensus 11 ~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~-----p~-~~~ 83 (438)
.+...+..+++|++++....+.+....... ....+.....+..+|..| ..|++++|+.+|.+++.+. ++ ...
T Consensus 74 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 152 (311)
T 3nf1_A 74 ILALVYRDQNKYKDAANLLNDALAIREKTL-GKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDV 152 (311)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHH
Confidence 345556666788888877777665431000 001112223344556666 8899999999999999873 22 223
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHhcc--------CCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhc--------
Q 013696 84 ATSEKELGNECFKQKKFKEAIDCYSRSIAL--------SPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNL-------- 146 (438)
Q Consensus 84 a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~--------~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l-------- 146 (438)
+..+..+|.+++..|++++|+.+|.+++.+ .|. ..++.++|.+|..+|++++|+..+.+++.+
T Consensus 153 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 232 (311)
T 3nf1_A 153 AKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGS 232 (311)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 445889999999999999999999999998 555 788999999999999999999999999974
Q ss_pred -----------------------------------------CCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 013696 147 -----------------------------------------DDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQ 183 (438)
Q Consensus 147 -----------------------------------------~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~ 183 (438)
+|..+.+++.+|.+|..+|++++|+.+|++++++.|.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 233 VDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp -----CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred CCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc
Confidence 4667889999999999999999999999999999875
No 120
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.39 E-value=3.5e-13 Score=119.01 Aligned_cols=156 Identities=11% Similarity=-0.031 Sum_probs=126.6
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHH
Q 013696 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKEL 90 (438)
Q Consensus 12 l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~ 90 (438)
+...+-..++|++++....+.+...+ .....+..+|..| ..|++++|+..|++++..+| ++.. +...
T Consensus 12 ~a~~~~~~g~~~~A~~~~~~al~~~P---------~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~--~~~~ 79 (176)
T 2r5s_A 12 QVSELLQQGEHAQALNVIQTLSDELQ---------SRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSY--KSLI 79 (176)
T ss_dssp HHHHHHHTTCHHHHHHHHHTSCHHHH---------TSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHH--HHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCC---------CcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHH--HHHH
Confidence 34455566788888888777776554 2223445566666 88999999999999999998 6654 3344
Q ss_pred HHHH-HHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcc--HHHHHHHHHHHHHcCC
Q 013696 91 GNEC-FKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY--IKAYSRRATARKELGK 166 (438)
Q Consensus 91 g~~~-~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~--~~a~~~lg~a~~~lg~ 166 (438)
|... ...+....|+.+|+++++++|+ +.+++++|.++...|++++|+..|.+++.++|++ ..++..+|.++..+|+
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~ 159 (176)
T 2r5s_A 80 AKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQ 159 (176)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCS
T ss_pred HHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCC
Confidence 5443 3334455689999999999999 9999999999999999999999999999999976 6699999999999999
Q ss_pred HHHHHHHHHHHHh
Q 013696 167 LKESIEDSEFALR 179 (438)
Q Consensus 167 ~~eA~~~~~~al~ 179 (438)
+++|+..|+++|.
T Consensus 160 ~~~A~~~y~~al~ 172 (176)
T 2r5s_A 160 GNAIASKYRRQLY 172 (176)
T ss_dssp SCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHH
Confidence 9999999999874
No 121
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.39 E-value=1.8e-13 Score=134.41 Aligned_cols=127 Identities=12% Similarity=0.054 Sum_probs=79.9
Q ss_pred cCCCccchHHHHHhhhcCCCCChh---------------HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPD---------------ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANR 123 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~---------------a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~l 123 (438)
..|+|++|+..|.+++...|.+.. ...+.++|.+|++.|+|++|+.+|.+++.++|+ ..+|+++
T Consensus 191 ~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l 270 (338)
T 2if4_A 191 KEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRR 270 (338)
T ss_dssp SSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 789999999999999999887652 014789999999999999999999999999998 9999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHH-HHHcCCHHHHHHHHHHHHhhCCCCHH
Q 013696 124 AMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATA-RKELGKLKESIEDSEFALRLEPQNQE 186 (438)
Q Consensus 124 a~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a-~~~lg~~~eA~~~~~~al~l~P~~~~ 186 (438)
|.+|..+|+|++|+.+|++++.++|++..++..++.+ ....+..+.+...|.+++.+.|.++.
T Consensus 271 g~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 271 GKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp HHHHHTTTCHHHHHHHHHHTTC------------------------------------------
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 9999999999999999999999999999999999988 44567788999999999999998764
No 122
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.39 E-value=6.7e-13 Score=109.05 Aligned_cols=98 Identities=10% Similarity=0.101 Sum_probs=85.1
Q ss_pred CCCccchHHHHHhhhcC---CCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHH
Q 013696 61 YSRNYDPVSHISSSLMN---EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEA 136 (438)
Q Consensus 61 ~g~~~eAi~~~~~al~~---~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA 136 (438)
.|++++|+..|++++.. +|++..+ +..+|.+|+..|+|++|+.+|.++++++|+ +.+++++|.+|..+|++++|
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~--~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAEC--YLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 58899999999999999 4666666 779999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHhhcCCccHHHHHHHHHH
Q 013696 137 EDDCTEALNLDDRYIKAYSRRATA 160 (438)
Q Consensus 137 ~~~~~~al~l~p~~~~a~~~lg~a 160 (438)
+..+.+++.++|+++........+
T Consensus 81 ~~~~~~al~~~p~~~~~~~~~~ai 104 (117)
T 3k9i_A 81 VELLLKIIAETSDDETIQSYKQAI 104 (117)
T ss_dssp HHHHHHHHHHHCCCHHHHHTHHHH
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHH
Confidence 999999999999998765433333
No 123
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.39 E-value=4.6e-13 Score=112.19 Aligned_cols=98 Identities=13% Similarity=0.081 Sum_probs=87.4
Q ss_pred CCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC--------HHHHHHHH
Q 013696 54 PSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT--------AVAYANRA 124 (438)
Q Consensus 54 ~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~--------~~~~~~la 124 (438)
.+|..| ..|+|++|+.+|++++.++|++..+ +.++|.+|+..|+|++|+.+|.++++++|. +.+|+++|
T Consensus 13 ~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~--~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg 90 (127)
T 4gcn_A 13 DLGNAAYKQKDFEKAHVHYDKAIELDPSNITF--YNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAG 90 (127)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHH
Confidence 345555 8999999999999999999999888 779999999999999999999999999875 46899999
Q ss_pred HHHHHhcCHHHHHHHHHHHhhcCCccHHHH
Q 013696 125 MAYLKLRRFQEAEDDCTEALNLDDRYIKAY 154 (438)
Q Consensus 125 ~~~~~l~~~~eA~~~~~~al~l~p~~~~a~ 154 (438)
.+|..+|+|++|+.+|++++...|+ +...
T Consensus 91 ~~~~~~~~~~~A~~~~~kal~~~~~-~~~~ 119 (127)
T 4gcn_A 91 NAFQKQNDLSLAVQWFHRSLSEFRD-PELV 119 (127)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSCC-HHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCcC-HHHH
Confidence 9999999999999999999998875 4433
No 124
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.39 E-value=4.9e-13 Score=127.74 Aligned_cols=132 Identities=11% Similarity=0.049 Sum_probs=113.1
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~ 138 (438)
..|++++|+..|.+++..+|++..+ +.++|.+|+..|+|++|+..|.++++++|+ ..+++++|.+|..+|++++|+.
T Consensus 16 ~~g~~~~A~~~~~~al~~~p~~~~~--~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~ 93 (281)
T 2c2l_A 16 VGRKYPEAAACYGRAITRNPLVAVY--YTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIA 93 (281)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCccHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 7899999999999999999998888 779999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHhhcCCccH-----HHHH--------------------------HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH
Q 013696 139 DCTEALNLDDRYI-----KAYS--------------------------RRATARKELGKLKESIEDSEFALRLEPQNQEI 187 (438)
Q Consensus 139 ~~~~al~l~p~~~-----~a~~--------------------------~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~ 187 (438)
+|.+++.++|++. .++. .++. ...|++++|++.++++++++|++...
T Consensus 94 ~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~--l~~~~~~~A~~~~~~al~~~p~~~~~ 171 (281)
T 2c2l_A 94 NLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTR--LIAAERERELEECQRNHEGHEDDGHI 171 (281)
T ss_dssp HHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHH--HHHHHHHHHHTTTSGGGTTTSCHHHH
T ss_pred HHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH--HHHHHHHHHHHHHHhhhccccchhhh
Confidence 9999999998652 1111 1121 23688999999999999999998776
Q ss_pred HHHHHHHH
Q 013696 188 KKQLAEVK 195 (438)
Q Consensus 188 ~~~l~~a~ 195 (438)
...+....
T Consensus 172 ~~~l~~~~ 179 (281)
T 2c2l_A 172 RAQQACIE 179 (281)
T ss_dssp THHHHHHH
T ss_pred hhHHHHHH
Confidence 55554433
No 125
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.39 E-value=8.9e-13 Score=130.63 Aligned_cols=163 Identities=13% Similarity=0.031 Sum_probs=117.9
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCC-----hhHHHHHHHH
Q 013696 18 DLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEEST-----PDATSEKELG 91 (438)
Q Consensus 18 ~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~-----~~a~~~~~~g 91 (438)
..++|++++....+++....... ..+.....+..+|..| ..|++++|+.++.+++.+.+.. ..+..+..+|
T Consensus 113 ~~g~~~~A~~~~~~al~~~~~~~---~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg 189 (378)
T 3q15_A 113 DQKEYVEAIGYYREAEKELPFVS---DDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIA 189 (378)
T ss_dssp HTTCHHHHHHHHHHHHTTGGGCC---CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHHHHHhhCC---ChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHH
Confidence 34566677777666665432110 1112222334556666 7888888888888888764432 2245577888
Q ss_pred HHHHHhccHHHHHHHHHHHhccCC---C----HHHHHHHHHHHHHhcCHHHHHHHHHHHhh-----cCCccHHHHHHHHH
Q 013696 92 NECFKQKKFKEAIDCYSRSIALSP---T----AVAYANRAMAYLKLRRFQEAEDDCTEALN-----LDDRYIKAYSRRAT 159 (438)
Q Consensus 92 ~~~~~~g~y~~Ai~~y~~al~~~p---~----~~~~~~la~~~~~l~~~~eA~~~~~~al~-----l~p~~~~a~~~lg~ 159 (438)
.+|...|+|++|+.+|.+++.+.+ + +.++.++|.+|..+|++++|+.++.+++. .+|..+.+++++|.
T Consensus 190 ~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~ 269 (378)
T 3q15_A 190 GNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSW 269 (378)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHH
Confidence 888888888888888888888632 1 56788888888888888888888888888 77777888888888
Q ss_pred HHHHcCCHHHHHHHHHHHHhhCCC
Q 013696 160 ARKELGKLKESIEDSEFALRLEPQ 183 (438)
Q Consensus 160 a~~~lg~~~eA~~~~~~al~l~P~ 183 (438)
++..+|++++|+.++++++.+.+.
T Consensus 270 ~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 270 TLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHH
Confidence 888888888888888888888654
No 126
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.38 E-value=8.2e-13 Score=112.41 Aligned_cols=109 Identities=16% Similarity=0.015 Sum_probs=96.6
Q ss_pred CCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcC
Q 013696 55 SPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRR 132 (438)
Q Consensus 55 ~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~ 132 (438)
.|..| ..|++++|+..|.+++..+|++..+ |..+|.++...|+|++|+.+|.+++.++|+ +.+++++|.||..+|+
T Consensus 24 ~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 101 (142)
T 2xcb_A 24 LGFNQYQAGKWDDAQKIFQALCMLDHYDARY--FLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGD 101 (142)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHccHHHHHHHHHHHHHhCCccHHH--HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCC
Confidence 34444 7899999999999999999999888 779999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcC
Q 013696 133 FQEAEDDCTEALNLDDRYIKAYSRRATARKELG 165 (438)
Q Consensus 133 ~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg 165 (438)
+++|+.+|++++.++|+++..+..+..+...++
T Consensus 102 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~ 134 (142)
T 2xcb_A 102 LDGAESGFYSARALAAAQPAHEALAARAGAMLE 134 (142)
T ss_dssp HHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHH
Confidence 999999999999999988776655555544433
No 127
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.38 E-value=1.1e-13 Score=133.84 Aligned_cols=151 Identities=7% Similarity=-0.006 Sum_probs=125.0
Q ss_pred CCCCcC-cCCCccchHHHHHhhhcCCCCC----hhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-------HHHHH
Q 013696 54 PSPSGN-SYSRNYDPVSHISSSLMNEEST----PDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYA 121 (438)
Q Consensus 54 ~~~~~y-~~g~~~eAi~~~~~al~~~p~~----~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-------~~~~~ 121 (438)
..|..| ..|++++|+..|.+++.+.+.. ..+..+.++|.+|...|+|++|+.+|.+++.+.+. +.++.
T Consensus 41 ~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~ 120 (307)
T 2ifu_A 41 KAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALD 120 (307)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 344556 7899999999999999875433 22455889999999999999999999999998532 57899
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhhcCCcc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH------H--
Q 013696 122 NRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGKLKESIEDSEFALRLEPQNQE------I-- 187 (438)
Q Consensus 122 ~la~~~~~l~~~~eA~~~~~~al~l~p~~------~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~------~-- 187 (438)
++|.+|.. |++++|+.+|++|+.+.+.. ..++.++|.+|..+|+|++|+.+|++++.+.|.+.. +
T Consensus 121 ~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 199 (307)
T 2ifu_A 121 RAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCI 199 (307)
T ss_dssp HHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHH
Confidence 99999999 99999999999999987653 678999999999999999999999999998764421 1
Q ss_pred --------HHHHHHHHHHHHHHHhhch
Q 013696 188 --------KKQLAEVKSLYEKEVFQKA 206 (438)
Q Consensus 188 --------~~~l~~a~~~~~ka~~~~~ 206 (438)
.+++.+|...|++++ ..+
T Consensus 200 ~~g~~~~~~g~~~~A~~~~~~al-~~p 225 (307)
T 2ifu_A 200 AQVLVQLHRADYVAAQKCVRESY-SIP 225 (307)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHT-TST
T ss_pred HHHHHHHHcCCHHHHHHHHHHHh-CCC
Confidence 256778888888877 654
No 128
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.38 E-value=7.7e-13 Score=136.18 Aligned_cols=114 Identities=35% Similarity=0.651 Sum_probs=107.1
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcC
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG 165 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg 165 (438)
++.+|..++..|+|++|+.+|+++++++|. +.+|+++|.+|..+|+|++|+.+|++++.++|+++.+|+++|.+|..+|
T Consensus 9 ~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g 88 (477)
T 1wao_1 9 LKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALG 88 (477)
T ss_dssp SSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 668899999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 013696 166 KLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEK 200 (438)
Q Consensus 166 ~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~k 200 (438)
++++|+.+|+++++++|++..++..+..+...+.+
T Consensus 89 ~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 123 (477)
T 1wao_1 89 KFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQ 123 (477)
T ss_dssp CHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888887777555443
No 129
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.37 E-value=8.6e-13 Score=130.76 Aligned_cols=151 Identities=8% Similarity=0.067 Sum_probs=124.0
Q ss_pred CCCcC-cCCCccchHHHHHhhhcCC---CCCh-hHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC--------HHHHH
Q 013696 55 SPSGN-SYSRNYDPVSHISSSLMNE---ESTP-DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT--------AVAYA 121 (438)
Q Consensus 55 ~~~~y-~~g~~~eAi~~~~~al~~~---p~~~-~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~--------~~~~~ 121 (438)
.|..| ..|++++|+..|.+++.+. ++.. .+..+..+|.+|+..|++++|+.+|.+++.+.+. +.++.
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 188 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHS 188 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 34444 7899999999999999862 2222 4566889999999999999999999999998432 57899
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhhcCCcc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----C-CCCHHH--
Q 013696 122 NRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGKLKESIEDSEFALRL-----E-PQNQEI-- 187 (438)
Q Consensus 122 ~la~~~~~l~~~~eA~~~~~~al~l~p~~------~~a~~~lg~a~~~lg~~~eA~~~~~~al~l-----~-P~~~~~-- 187 (438)
++|.+|..+|+|++|+.+|.+++.+.+.. ..+++++|.+|..+|++++|+.+|++++.+ + |....+
T Consensus 189 ~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 268 (383)
T 3ulq_A 189 LFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYF 268 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHH
Confidence 99999999999999999999999885533 368999999999999999999999999995 4 554444
Q ss_pred --------HHHHHHHHHHHHHHHhhc
Q 013696 188 --------KKQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 188 --------~~~l~~a~~~~~ka~~~~ 205 (438)
.+++.+|...+.+++...
T Consensus 269 ~l~~~~~~~g~~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 269 LITQIHYKLGKIDKAHEYHSKGMAYS 294 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 355667777777776654
No 130
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.37 E-value=7.4e-13 Score=135.49 Aligned_cols=119 Identities=14% Similarity=0.170 Sum_probs=104.5
Q ss_pred CCCcC-cCCCccchHHHHHhhhcCCCCChh-------------HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHH
Q 013696 55 SPSGN-SYSRNYDPVSHISSSLMNEESTPD-------------ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVA 119 (438)
Q Consensus 55 ~~~~y-~~g~~~eAi~~~~~al~~~p~~~~-------------a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~ 119 (438)
.|..| ..|+|.+|+..|.+++.++|.+.. +..+.++|.+|++.|+|++|+.+|.+++.++|+ +.+
T Consensus 274 ~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a 353 (457)
T 1kt0_A 274 KGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKG 353 (457)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHH
Confidence 34444 789999999999999999988731 344889999999999999999999999999999 999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHH
Q 013696 120 YANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIED 173 (438)
Q Consensus 120 ~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~ 173 (438)
|+++|.+|..+|+|++|+.+|++++.++|++..++..++.++..+|++++|...
T Consensus 354 ~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 354 LYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999887644
No 131
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.36 E-value=7.3e-12 Score=131.52 Aligned_cols=145 Identities=11% Similarity=0.103 Sum_probs=132.0
Q ss_pred ccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhcc----------HHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhc-
Q 013696 64 NYDPVSHISSSLMNEESTPDATSEKELGNECFKQKK----------FKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR- 131 (438)
Q Consensus 64 ~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~----------y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~- 131 (438)
.++|+..+++++.++|++..+ |+.+|.++...|+ |++|+.+|.+++..+|. ..+|++++.++..++
T Consensus 45 ~eeal~~~~~~l~~nP~~~ta--W~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~ 122 (567)
T 1dce_A 45 DESVLELTSQILGANPDFATL--WNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPE 122 (567)
T ss_dssp SHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSS
T ss_pred CHHHHHHHHHHHHHCchhHHH--HHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccc
Confidence 457899999999999999999 7799999999998 99999999999999999 999999999999999
Q ss_pred -CHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCHHHH---------------------
Q 013696 132 -RFQEAEDDCTEALNLDDRYIKAYSRRATARKELG-KLKESIEDSEFALRLEPQNQEIK--------------------- 188 (438)
Q Consensus 132 -~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg-~~~eA~~~~~~al~l~P~~~~~~--------------------- 188 (438)
+|++|+.+|.++++++|.+..||..+|.++..+| .++++++++.++++++|.|..+|
T Consensus 123 ~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~ 202 (567)
T 1dce_A 123 PNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGR 202 (567)
T ss_dssp CCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCS
T ss_pred ccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhccccccccccc
Confidence 7799999999999999999999999999999999 99999999999999999998873
Q ss_pred ---HHHHHHHHHHHHHHhhchhhhh
Q 013696 189 ---KQLAEVKSLYEKEVFQKASKTL 210 (438)
Q Consensus 189 ---~~l~~a~~~~~ka~~~~~~~~~ 210 (438)
+.+.++++.+.+++..++.+..
T Consensus 203 ~~~~~~~eel~~~~~ai~~~P~~~s 227 (567)
T 1dce_A 203 LPENVLLKELELVQNAFFTDPNDQS 227 (567)
T ss_dssp SCHHHHHHHHHHHHHHHHHCSSCSH
T ss_pred ccHHHHHHHHHHHHHHHhhCCCCcc
Confidence 3456777777888888766544
No 132
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.36 E-value=2.1e-12 Score=123.56 Aligned_cols=160 Identities=12% Similarity=0.036 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCC----hhHHHHHHHHHH
Q 013696 19 LQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEEST----PDATSEKELGNE 93 (438)
Q Consensus 19 l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~----~~a~~~~~~g~~ 93 (438)
.++|++++....+.+...+. . ............+|..| ..|++++|+.+|.+++...+.. ..+..+..+|.+
T Consensus 88 ~~~y~~A~~~~~~~l~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~ 164 (293)
T 2qfc_A 88 QKRYKEIYNKVWNELKKEEY--H-PEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANI 164 (293)
T ss_dssp TTCHHHHHHHHHHHHHTCCC--C-HHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhccccC--C-hhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 34666666666666654431 0 00000001112244444 6778999999999988754432 124457889999
Q ss_pred HHHhccHHHHHHHHHHHhcc---CCC-----HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCc------cHHHHHHHHH
Q 013696 94 CFKQKKFKEAIDCYSRSIAL---SPT-----AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDR------YIKAYSRRAT 159 (438)
Q Consensus 94 ~~~~g~y~~Ai~~y~~al~~---~p~-----~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~------~~~a~~~lg~ 159 (438)
|+..|+|++|+.+|.+++.+ .|. ..+++++|.+|..+|+|++|+.++++++.+.+. ...+|+++|.
T Consensus 165 y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~ 244 (293)
T 2qfc_A 165 YAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGE 244 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 99999999999999998843 443 268889999999999999999999999877543 2678889999
Q ss_pred HHHHcCCHHHH-HHHHHHHHhhC
Q 013696 160 ARKELGKLKES-IEDSEFALRLE 181 (438)
Q Consensus 160 a~~~lg~~~eA-~~~~~~al~l~ 181 (438)
+|..+|++++| ..+|++++.+.
T Consensus 245 ~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 245 CLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCcHHHHHHHHHHHHHHH
Confidence 99999999999 77788888764
No 133
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.35 E-value=5.5e-12 Score=118.66 Aligned_cols=175 Identities=17% Similarity=0.091 Sum_probs=137.5
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-c----CCCccchHHHHHhhhcCCCCChhHH
Q 013696 11 DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-S----YSRNYDPVSHISSSLMNEESTPDAT 85 (438)
Q Consensus 11 ~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~----~g~~~eAi~~~~~al~~~p~~~~a~ 85 (438)
.+...+...+++++++....+.+... .......+|..| . .+++++|+.+|.+++..+ ++.+
T Consensus 11 ~lg~~~~~~~~~~~A~~~~~~a~~~~-----------~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a- 76 (273)
T 1ouv_A 11 GLGAKSYKEKDFTQAKKYFEKACDLK-----------ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNG- 76 (273)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTT-----------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHH-
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHH-
Confidence 34556666678888888877777521 112334455555 5 889999999999999875 4555
Q ss_pred HHHHHHHHHHH----hccHHHHHHHHHHHhccCCCHHHHHHHHHHHHH----hcCHHHHHHHHHHHhhcCCccHHHHHHH
Q 013696 86 SEKELGNECFK----QKKFKEAIDCYSRSIALSPTAVAYANRAMAYLK----LRRFQEAEDDCTEALNLDDRYIKAYSRR 157 (438)
Q Consensus 86 ~~~~~g~~~~~----~g~y~~Ai~~y~~al~~~p~~~~~~~la~~~~~----l~~~~eA~~~~~~al~l~p~~~~a~~~l 157 (438)
+..+|.+|.. .+++++|+.+|++++..+ .+.+++++|.+|.. .+++++|+.+|++++.++ ++.+++++
T Consensus 77 -~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~-~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~l 152 (273)
T 1ouv_A 77 -CHLLGNLYYSGQGVSQNTNKALQYYSKACDLK-YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTIL 152 (273)
T ss_dssp -HHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHH
T ss_pred -HHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC-CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHH
Confidence 7799999999 999999999999999874 58899999999999 999999999999999976 68899999
Q ss_pred HHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHH--------------HHHHHHHHHHHHHHhhc
Q 013696 158 ATARKE----LGKLKESIEDSEFALRLEPQNQEIK--------------KQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 158 g~a~~~----lg~~~eA~~~~~~al~l~P~~~~~~--------------~~l~~a~~~~~ka~~~~ 205 (438)
|.+|.. .+++++|+.+|++++++++ +.+. +++.+|...|.+++...
T Consensus 153 g~~~~~~~~~~~~~~~A~~~~~~a~~~~~--~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~ 216 (273)
T 1ouv_A 153 GSLYDAGRGTPKDLKKALASYDKACDLKD--SPGCFNAGNMYHHGEGATKNFKEALARYSKACELE 216 (273)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCCCCCHHHHHHHHHHHHHCCC--HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCC
Confidence 999998 9999999999999998854 3332 34556666666666554
No 134
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.35 E-value=1.1e-12 Score=125.49 Aligned_cols=155 Identities=13% Similarity=-0.004 Sum_probs=133.7
Q ss_pred HHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHH
Q 013696 14 GFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGN 92 (438)
Q Consensus 14 ~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~ 92 (438)
..+...+++++++..+.+.+...+ .....+..+|..| ..|++++|+..|++++..+|+.... ....+.
T Consensus 125 ~~~~~~g~~~~A~~~~~~al~~~P---------~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~--~~~~~~ 193 (287)
T 3qou_A 125 MQLMQESNYTDALPLLXDAWQLSN---------QNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQ--GLVAQI 193 (287)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTT---------SCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHH--HHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCC---------cchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHH--HHHHHH
Confidence 334445678888888888887765 1222344556666 8899999999999999999965444 557788
Q ss_pred HHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcc--HHHHHHHHHHHHHcCCHHH
Q 013696 93 ECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY--IKAYSRRATARKELGKLKE 169 (438)
Q Consensus 93 ~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~--~~a~~~lg~a~~~lg~~~e 169 (438)
.+...+++++|+..|.+++..+|+ ..+++++|.+|...|++++|+..|.+++..+|++ ..++.++|.++..+|+.++
T Consensus 194 ~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~ 273 (287)
T 3qou_A 194 ELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDA 273 (287)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCH
T ss_pred HHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCc
Confidence 899999999999999999999999 9999999999999999999999999999999998 8999999999999999999
Q ss_pred HHHHHHHHHh
Q 013696 170 SIEDSEFALR 179 (438)
Q Consensus 170 A~~~~~~al~ 179 (438)
|+..|++++.
T Consensus 274 a~~~~r~al~ 283 (287)
T 3qou_A 274 LASXYRRQLY 283 (287)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999885
No 135
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.35 E-value=1.1e-12 Score=114.08 Aligned_cols=96 Identities=13% Similarity=0.121 Sum_probs=86.9
Q ss_pred cCCCccchHHHHHhhhcCCCCC-------hh---HHHHHHHHHHHHHhccHHHHHHHHHHHhcc-------CCC-HHHH-
Q 013696 60 SYSRNYDPVSHISSSLMNEEST-------PD---ATSEKELGNECFKQKKFKEAIDCYSRSIAL-------SPT-AVAY- 120 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~-------~~---a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~-------~p~-~~~~- 120 (438)
..|+|++|+..|+++|.++|++ .. +..|.++|.++.+.|+|++|+.+|+++|++ +|+ +.+|
T Consensus 23 ~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~ 102 (159)
T 2hr2_A 23 VAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWI 102 (159)
T ss_dssp HHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHH
T ss_pred HCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHHHH
Confidence 7799999999999999999983 22 335889999999999999999999999999 999 8889
Q ss_pred ---HHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHH
Q 013696 121 ---ANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYS 155 (438)
Q Consensus 121 ---~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~ 155 (438)
+++|.++..+|+|++|+.+|++++.++|++...+-
T Consensus 103 ~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~ 140 (159)
T 2hr2_A 103 SAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETP 140 (159)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCT
T ss_pred HHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 99999999999999999999999999998754433
No 136
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.35 E-value=5.5e-12 Score=120.58 Aligned_cols=146 Identities=16% Similarity=0.116 Sum_probs=119.6
Q ss_pred cCCCccchHHHHHhhhcCCCCChh----HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-------HHHHHHHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPD----ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYL 128 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~----a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-------~~~~~~la~~~~ 128 (438)
..|++++|+..+.+++...+..+. ...++.+|..+...|+|++|+.+|.+++.+.+. ..++.++|.+|.
T Consensus 87 ~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 166 (293)
T 3u3w_A 87 KQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA 166 (293)
T ss_dssp HTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Confidence 779999999999999998776665 233556899999999999999999999996533 457999999999
Q ss_pred HhcCHHHHHHHHHHHhh-------cCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHH--------
Q 013696 129 KLRRFQEAEDDCTEALN-------LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN------QEI-------- 187 (438)
Q Consensus 129 ~l~~~~eA~~~~~~al~-------l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~------~~~-------- 187 (438)
.+|+|++|+.+|.+++. ..+....+++++|.+|..+|+|++|+.++++++.+.+.. ..+
T Consensus 167 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~ 246 (293)
T 3u3w_A 167 ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECL 246 (293)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 99999999999999994 233446789999999999999999999999999987543 222
Q ss_pred --HH-HHHHHHHHHHHHHhhc
Q 013696 188 --KK-QLAEVKSLYEKEVFQK 205 (438)
Q Consensus 188 --~~-~l~~a~~~~~ka~~~~ 205 (438)
.+ .+.+|...|++++...
T Consensus 247 ~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 247 RKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHTTCCHHHHHHHHHHHHHHH
T ss_pred HHhCCcHHHHHHHHHHHHHHH
Confidence 33 2467888888777654
No 137
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.34 E-value=2.5e-12 Score=123.05 Aligned_cols=160 Identities=13% Similarity=0.040 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChh----HHHHHHHHHH
Q 013696 19 LQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPD----ATSEKELGNE 93 (438)
Q Consensus 19 l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~----a~~~~~~g~~ 93 (438)
.++|++++....+.+...+. .+. .......+..+|..| ..|++++|+.+|.+++.+.+.... +..+..+|.+
T Consensus 88 ~~~y~~a~~~~~~~l~~~~~--~~~-~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~ 164 (293)
T 3u3w_A 88 QKRYKEIYNKVWNELKKEEY--HPE-FQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANI 164 (293)
T ss_dssp TTCHHHHHHHHHHHHTTCCC--CHH-HHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHhccccC--ChH-HHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHH
Confidence 35677777776666653320 000 000001112345555 678999999999999986543322 4458899999
Q ss_pred HHHhccHHHHHHHHHHHhcc------CC-C-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcc------HHHHHHHHH
Q 013696 94 CFKQKKFKEAIDCYSRSIAL------SP-T-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSRRAT 159 (438)
Q Consensus 94 ~~~~g~y~~Ai~~y~~al~~------~p-~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~------~~a~~~lg~ 159 (438)
|...|+|++|+.+|.+++.. ++ . +.+++|+|.+|..+|+|++|+.++.+++.+.+.. +.+|+++|.
T Consensus 165 y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~ 244 (293)
T 3u3w_A 165 YAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGE 244 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 99999999999999999953 21 2 6789999999999999999999999999887543 789999999
Q ss_pred HHHHcCC-HHHHHHHHHHHHhhC
Q 013696 160 ARKELGK-LKESIEDSEFALRLE 181 (438)
Q Consensus 160 a~~~lg~-~~eA~~~~~~al~l~ 181 (438)
++..+|+ +++|+.+|++|+.+.
T Consensus 245 ~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 245 CLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCcHHHHHHHHHHHHHHH
Confidence 9999995 799999999998764
No 138
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.34 E-value=1.2e-12 Score=113.48 Aligned_cols=90 Identities=14% Similarity=0.134 Sum_probs=84.0
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccH----------HHHHHHHHHHhccCCC-HHHHHHHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKF----------KEAIDCYSRSIALSPT-AVAYANRAMAYL 128 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y----------~~Ai~~y~~al~~~p~-~~~~~~la~~~~ 128 (438)
+.+.|++|+..|++++.++|++.++ |.++|.++...+++ ++|+.+|+++|+++|+ ..+|+++|.+|.
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea--~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADN--LTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 5678999999999999999999998 77999999999875 5999999999999999 999999999999
Q ss_pred Hhc-----------CHHHHHHHHHHHhhcCCccH
Q 013696 129 KLR-----------RFQEAEDDCTEALNLDDRYI 151 (438)
Q Consensus 129 ~l~-----------~~~eA~~~~~~al~l~p~~~ 151 (438)
.+| +|++|+.+|++|+.++|++.
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 885 89999999999999999985
No 139
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.33 E-value=1.1e-12 Score=105.46 Aligned_cols=93 Identities=30% Similarity=0.508 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcc------HHHHHH
Q 013696 84 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSR 156 (438)
Q Consensus 84 a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~------~~a~~~ 156 (438)
+..++.+|.+++..|+|++|+.+|.+++.++|. +.+++++|.||..+|+|++|+.+|++++.++|++ ..++++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 83 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYR 83 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 344789999999999999999999999999998 9999999999999999999999999999999998 999999
Q ss_pred HHHHHHHcCCHHHHHHHHHH
Q 013696 157 RATARKELGKLKESIEDSEF 176 (438)
Q Consensus 157 lg~a~~~lg~~~eA~~~~~~ 176 (438)
+|.++..+|+++.|+..+++
T Consensus 84 ~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 84 LELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHhHhhhHhHHHH
Confidence 99999999998888776654
No 140
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.33 E-value=2.9e-11 Score=117.05 Aligned_cols=148 Identities=7% Similarity=-0.063 Sum_probs=131.3
Q ss_pred cCCCc-cchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhc--cHHHHHHHHHHHhccCCC-HHHHHHHHHHH----HHh-
Q 013696 60 SYSRN-YDPVSHISSSLMNEESTPDATSEKELGNECFKQK--KFKEAIDCYSRSIALSPT-AVAYANRAMAY----LKL- 130 (438)
Q Consensus 60 ~~g~~-~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g--~y~~Ai~~y~~al~~~p~-~~~~~~la~~~----~~l- 130 (438)
..|.+ ++|+..+.++|.++|.+..+ |+.+|.++...| ++++++.++..++..+|. ..+|..++.++ ..+
T Consensus 44 ~~~e~s~~aL~~t~~~L~~nP~~~ta--Wn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~ 121 (306)
T 3dra_A 44 KAEEYSERALHITELGINELASHYTI--WIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNN 121 (306)
T ss_dssp HTTCCSHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTT
T ss_pred HcCCCCHHHHHHHHHHHHHCcHHHHH--HHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhcc
Confidence 33444 58999999999999999999 779999999999 999999999999999999 99999999999 777
Q ss_pred --cCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHH--HHHHHHHHHHhhCCCCHHHHHH----------------
Q 013696 131 --RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLK--ESIEDSEFALRLEPQNQEIKKQ---------------- 190 (438)
Q Consensus 131 --~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~--eA~~~~~~al~l~P~~~~~~~~---------------- 190 (438)
+++++++..|.+++.++|.+..+|+.++.++..+|.++ ++++.+.+++.++|.|..++..
T Consensus 122 ~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~ 201 (306)
T 3dra_A 122 NDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNT 201 (306)
T ss_dssp TCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHH
T ss_pred ccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhh
Confidence 79999999999999999999999999999999999999 9999999999999999988543
Q ss_pred HHHHHHHHHHHHhhchhhh
Q 013696 191 LAEVKSLYEKEVFQKASKT 209 (438)
Q Consensus 191 l~~a~~~~~ka~~~~~~~~ 209 (438)
+.+++..+.+++..++.+.
T Consensus 202 ~~eEl~~~~~aI~~~p~n~ 220 (306)
T 3dra_A 202 IDEELNYVKDKIVKCPQNP 220 (306)
T ss_dssp HHHHHHHHHHHHHHCSSCH
T ss_pred HHHHHHHHHHHHHhCCCCc
Confidence 5556666666666665544
No 141
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.33 E-value=4.3e-12 Score=119.42 Aligned_cols=141 Identities=14% Similarity=0.106 Sum_probs=120.4
Q ss_pred CCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHH----hccHHHHHHHHHHHhccCCCHHHHHHHHHHHHH
Q 013696 55 SPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFK----QKKFKEAIDCYSRSIALSPTAVAYANRAMAYLK 129 (438)
Q Consensus 55 ~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~----~g~y~~Ai~~y~~al~~~p~~~~~~~la~~~~~ 129 (438)
+|..| ..|++++|+.+|++++. +++..+ ++.+|.+|.. .+++++|+.+|.++++.+ .+.+++++|.+|..
T Consensus 12 lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a--~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~-~~~a~~~lg~~~~~ 86 (273)
T 1ouv_A 12 LGAKSYKEKDFTQAKKYFEKACD--LKENSG--CFNLGVLYYQGQGVEKNLKKAASFYAKACDLN-YSNGCHLLGNLYYS 86 (273)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH--TTCHHH--HHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHH--CCCHHH--HHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC-CHHHHHHHHHHHhC
Confidence 34445 67899999999999998 556666 7799999999 999999999999999985 58999999999999
Q ss_pred ----hcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHH-------------
Q 013696 130 ----LRRFQEAEDDCTEALNLDDRYIKAYSRRATARKE----LGKLKESIEDSEFALRLEPQNQEIK------------- 188 (438)
Q Consensus 130 ----l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~----lg~~~eA~~~~~~al~l~P~~~~~~------------- 188 (438)
.+++++|+.+|++++..+ ++.+++.+|.+|.. .|++++|+.+|++++.+++ ..+.
T Consensus 87 g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~--~~a~~~lg~~~~~~~~~ 162 (273)
T 1ouv_A 87 GQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND--GDGCTILGSLYDAGRGT 162 (273)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHTSSS
T ss_pred CCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc--HHHHHHHHHHHHcCCCC
Confidence 999999999999999984 89999999999999 9999999999999999874 3332
Q ss_pred -HHHHHHHHHHHHHHhh
Q 013696 189 -KQLAEVKSLYEKEVFQ 204 (438)
Q Consensus 189 -~~l~~a~~~~~ka~~~ 204 (438)
+++.+|...|++++..
T Consensus 163 ~~~~~~A~~~~~~a~~~ 179 (273)
T 1ouv_A 163 PKDLKKALASYDKACDL 179 (273)
T ss_dssp CCCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHC
Confidence 2345566666666544
No 142
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.33 E-value=1.2e-13 Score=137.19 Aligned_cols=192 Identities=13% Similarity=0.068 Sum_probs=143.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCC-----------------ccchHHHHHh
Q 013696 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSR-----------------NYDPVSHISS 73 (438)
Q Consensus 12 l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~-----------------~~eAi~~~~~ 73 (438)
+...+..+++|++++....+.+...... ...+.....+..+|..| ..|+ +++|+.+|.+
T Consensus 132 l~~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~ 208 (411)
T 4a1s_A 132 LGNTLKVMGRFDEAAICCERHLTLARQL---GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQE 208 (411)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHH
Confidence 3445555666777776666655442200 00111222334555566 7788 9999999999
Q ss_pred hhcCCCC----ChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-------HHHHHHHHHHHHHhcCHHHHHHHHHH
Q 013696 74 SLMNEES----TPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYLKLRRFQEAEDDCTE 142 (438)
Q Consensus 74 al~~~p~----~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-------~~~~~~la~~~~~l~~~~eA~~~~~~ 142 (438)
++.+.+. ...+..+..+|.+|+..|+|++|+.+|.+++.+.+. ..++.++|.+|..+|++++|+.+|++
T Consensus 209 al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 288 (411)
T 4a1s_A 209 NLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKR 288 (411)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 8875321 223445889999999999999999999999998754 45899999999999999999999999
Q ss_pred HhhcCCcc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH------HH----------HHHHHHHHHHHHH
Q 013696 143 ALNLDDRY------IKAYSRRATARKELGKLKESIEDSEFALRLEPQNQ------EI----------KKQLAEVKSLYEK 200 (438)
Q Consensus 143 al~l~p~~------~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~------~~----------~~~l~~a~~~~~k 200 (438)
++.+.+.. ..++..+|.++..+|++++|+.+|++++.+.+... .+ .+++.+|...|.+
T Consensus 289 al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 368 (411)
T 4a1s_A 289 TLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQ 368 (411)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 99988754 78899999999999999999999999999865431 11 4567788888888
Q ss_pred HHhhch
Q 013696 201 EVFQKA 206 (438)
Q Consensus 201 a~~~~~ 206 (438)
++.+..
T Consensus 369 al~~~~ 374 (411)
T 4a1s_A 369 HLQLAX 374 (411)
T ss_dssp HHHHCC
T ss_pred HHHHHh
Confidence 877653
No 143
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.32 E-value=3.3e-12 Score=106.04 Aligned_cols=91 Identities=15% Similarity=0.060 Sum_probs=81.9
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~ 138 (438)
..|++++|+..|++++..+|++..+ ++.+|.++...|++++|+.+|+++++++|+ ..+++++|.+|..+|++++|+.
T Consensus 29 ~~g~~~~A~~~~~~al~~~P~~~~a--~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~~~~A~~ 106 (121)
T 1hxi_A 29 KLANLAEAALAFEAVCQKEPEREEA--WRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALA 106 (121)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 7899999999999999999999988 779999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHhhcCCccHH
Q 013696 139 DCTEALNLDDRYIK 152 (438)
Q Consensus 139 ~~~~al~l~p~~~~ 152 (438)
.|++++.++|++..
T Consensus 107 ~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 107 SLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHC-------
T ss_pred HHHHHHHhCcCCCC
Confidence 99999999998754
No 144
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.32 E-value=1.7e-11 Score=98.56 Aligned_cols=101 Identities=17% Similarity=0.185 Sum_probs=95.8
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~ 138 (438)
..|++++|+..|.+++..+|.+..+ +..+|.+++..|+|++|+.+|.+++..+|. +.++.++|.++..+|++++|+.
T Consensus 16 ~~~~~~~A~~~~~~~~~~~~~~~~~--~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 93 (118)
T 1elw_A 16 SVGNIDDALQCYSEAIKLDPHNHVL--YSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKR 93 (118)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HcccHHHHHHHHHHHHHHCCCcHHH--HHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhhHHHHHH
Confidence 7799999999999999999998877 779999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHhhcCCccHHHHHHHHHHHH
Q 013696 139 DCTEALNLDDRYIKAYSRRATARK 162 (438)
Q Consensus 139 ~~~~al~l~p~~~~a~~~lg~a~~ 162 (438)
.+.+++.++|+++.++..++.+..
T Consensus 94 ~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 94 TYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHhhc
Confidence 999999999999999999987753
No 145
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.31 E-value=2.8e-11 Score=98.60 Aligned_cols=98 Identities=15% Similarity=0.140 Sum_probs=84.1
Q ss_pred HHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 013696 102 EAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRL 180 (438)
Q Consensus 102 ~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l 180 (438)
.|+.+|.++++.+|. +.+++++|.+|...|++++|+..|++++.++|+++.+|+.+|.++..+|++++|+..|++++.+
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAA 82 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 578899999999998 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC--HHHHHHHHHHHHHHH
Q 013696 181 EPQN--QEIKKQLAEVKSLYE 199 (438)
Q Consensus 181 ~P~~--~~~~~~l~~a~~~~~ 199 (438)
.|.+ ......+..++..+.
T Consensus 83 ~~~~~~~~~~~~l~~~l~~l~ 103 (115)
T 2kat_A 83 AQSRGDQQVVKELQVFLRRLA 103 (115)
T ss_dssp HHHHTCHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHhc
Confidence 8843 444445554444433
No 146
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.30 E-value=2e-11 Score=98.93 Aligned_cols=108 Identities=26% Similarity=0.376 Sum_probs=100.2
Q ss_pred CCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCH
Q 013696 56 PSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRF 133 (438)
Q Consensus 56 ~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~ 133 (438)
|..| ..|++++|+..|.+++...|.+..+ +..+|.+++..|++++|+.+|.+++..+|. ..++.++|.+|...|++
T Consensus 16 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 93 (125)
T 1na0_A 16 GNAYYKQGDYDEAIEYYQKALELDPNNAEA--WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDY 93 (125)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCcCcHHH--HHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCH
Confidence 3344 7799999999999999999988777 779999999999999999999999999998 89999999999999999
Q ss_pred HHHHHHHHHHhhcCCccHHHHHHHHHHHHHcC
Q 013696 134 QEAEDDCTEALNLDDRYIKAYSRRATARKELG 165 (438)
Q Consensus 134 ~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg 165 (438)
++|+..+.+++.++|+++.++..+|.++..+|
T Consensus 94 ~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 94 DEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999988765
No 147
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.30 E-value=3.5e-12 Score=112.06 Aligned_cols=116 Identities=16% Similarity=0.158 Sum_probs=99.1
Q ss_pred HHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHH-HHHcCCH--
Q 013696 92 NECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATA-RKELGKL-- 167 (438)
Q Consensus 92 ~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a-~~~lg~~-- 167 (438)
..+...|+|++|+..|.+++..+|. +.+|+.+|.+|...|++++|+..|.+++.++|+++.+++.+|.+ +...|++
T Consensus 18 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~ 97 (177)
T 2e2e_A 18 HQFASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMT 97 (177)
T ss_dssp CCCC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCC
T ss_pred hhhhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcch
Confidence 4456789999999999999999998 99999999999999999999999999999999999999999999 8899999
Q ss_pred HHHHHHHHHHHhhCCCCHHHH----------HHHHHHHHHHHHHHhhchh
Q 013696 168 KESIEDSEFALRLEPQNQEIK----------KQLAEVKSLYEKEVFQKAS 207 (438)
Q Consensus 168 ~eA~~~~~~al~l~P~~~~~~----------~~l~~a~~~~~ka~~~~~~ 207 (438)
++|+..|++++.++|++..++ +++.+|...|.+++...+.
T Consensus 98 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 147 (177)
T 2e2e_A 98 AQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSP 147 (177)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCC
Confidence 999999999999999998773 4456667777777666543
No 148
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.30 E-value=5e-13 Score=131.69 Aligned_cols=169 Identities=18% Similarity=0.154 Sum_probs=106.5
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChh----HHHH
Q 013696 13 QGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPD----ATSE 87 (438)
Q Consensus 13 ~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~----a~~~ 87 (438)
...+...++|++++....+.+...... ...+.....+..+|..| ..|++++|+.+|.+++.+.+.... +..+
T Consensus 54 ~~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 130 (406)
T 3sf4_A 54 GNAYFYLHDYAKALEYHHHDLTLARTI---GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARAL 130 (406)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHhc---cccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHH
Confidence 344444555566655555544332100 00111122233444455 677788888888777776543222 3346
Q ss_pred HHHHHHHHHhcc--------------------HHHHHHHHHHHhccC------CC-HHHHHHHHHHHHHhcCHHHHHHHH
Q 013696 88 KELGNECFKQKK--------------------FKEAIDCYSRSIALS------PT-AVAYANRAMAYLKLRRFQEAEDDC 140 (438)
Q Consensus 88 ~~~g~~~~~~g~--------------------y~~Ai~~y~~al~~~------p~-~~~~~~la~~~~~l~~~~eA~~~~ 140 (438)
..+|.+|...|+ |++|+.+|.+++.+. +. ..++.++|.+|..+|++++|+.++
T Consensus 131 ~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 210 (406)
T 3sf4_A 131 YNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAH 210 (406)
T ss_dssp HHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHH
T ss_pred HHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHH
Confidence 677888888888 888888887777762 22 566777888888888888888888
Q ss_pred HHHhhcCCcc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 013696 141 TEALNLDDRY------IKAYSRRATARKELGKLKESIEDSEFALRLEPQN 184 (438)
Q Consensus 141 ~~al~l~p~~------~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~ 184 (438)
.+++.+.+.. ..+++.+|.++..+|++++|+.+|++++.+.|..
T Consensus 211 ~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 260 (406)
T 3sf4_A 211 EQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQL 260 (406)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhC
Confidence 8887765543 2377778888888888888888888887776543
No 149
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.30 E-value=3.4e-12 Score=106.64 Aligned_cols=109 Identities=12% Similarity=0.011 Sum_probs=97.1
Q ss_pred CCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcC
Q 013696 55 SPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRR 132 (438)
Q Consensus 55 ~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~ 132 (438)
+|..| ..|++++|+..|.+++..+|.+..+ +..+|.+++..|+|++|+.+|.+++.++|. +.+++++|.+|..+|+
T Consensus 15 ~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~--~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 92 (137)
T 3q49_B 15 QGNRLFVGRKYPEAAACYGRAITRNPLVAVY--YTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMES 92 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCcHHHHHHHHHHHHhhCcCcHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHhh
Confidence 44444 8899999999999999999998887 779999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHHHHHhhcCCc-----cHHHHHHHHHHHHHcC
Q 013696 133 FQEAEDDCTEALNLDDR-----YIKAYSRRATARKELG 165 (438)
Q Consensus 133 ~~eA~~~~~~al~l~p~-----~~~a~~~lg~a~~~lg 165 (438)
+++|+.+|.+++.++|+ +..++..+..+.....
T Consensus 93 ~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~ 130 (137)
T 3q49_B 93 YDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRW 130 (137)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 6666666666655443
No 150
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.29 E-value=1.3e-10 Score=113.44 Aligned_cols=130 Identities=10% Similarity=0.061 Sum_probs=119.3
Q ss_pred cchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhcc----------HHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhc--
Q 013696 65 YDPVSHISSSLMNEESTPDATSEKELGNECFKQKK----------FKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR-- 131 (438)
Q Consensus 65 ~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~----------y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~-- 131 (438)
++|+..+..+|.++|.+..+ |+.++.++...+. +.+++.++..++..+|. ..+|..++.++..++
T Consensus 47 ~eaL~~t~~~L~~nP~~yta--Wn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~ 124 (331)
T 3dss_A 47 ESVLELTSQILGANPDFATL--WNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEP 124 (331)
T ss_dssp HHHHHHHHHHHTTCTTCHHH--HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHCchhHHH--HHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcc
Confidence 47999999999999999999 7788888887776 79999999999999999 999999999999999
Q ss_pred CHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 013696 132 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGK-LKESIEDSEFALRLEPQNQEIKKQLAEVKS 196 (438)
Q Consensus 132 ~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~-~~eA~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (438)
.+++++.+|.+++.++|.|..||..++.+...+|. ++++++++.+++.++|.|..++.....++.
T Consensus 125 ~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~ 190 (331)
T 3dss_A 125 NWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLP 190 (331)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 49999999999999999999999999999999999 699999999999999999998665555444
No 151
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.28 E-value=1.3e-11 Score=122.24 Aligned_cols=146 Identities=10% Similarity=0.037 Sum_probs=120.1
Q ss_pred cCCCccchHHHHHhhhcCCCC----ChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC--------HHHHHHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEES----TPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT--------AVAYANRAMAY 127 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~----~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~--------~~~~~~la~~~ 127 (438)
..|++++|+..|.+++.+.+. ...+..+..+|.+|+..|+++.|+.+|.+++.+.+. +.++.++|.+|
T Consensus 113 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y 192 (378)
T 3q15_A 113 DQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNY 192 (378)
T ss_dssp HTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH
Confidence 789999999999999986432 123556889999999999999999999999987532 66899999999
Q ss_pred HHhcCHHHHHHHHHHHhhcCC------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----hCCCCHHH---------
Q 013696 128 LKLRRFQEAEDDCTEALNLDD------RYIKAYSRRATARKELGKLKESIEDSEFALR-----LEPQNQEI--------- 187 (438)
Q Consensus 128 ~~l~~~~eA~~~~~~al~l~p------~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~-----l~P~~~~~--------- 187 (438)
..+|+|++|+.+|.+|+.+.+ ....+++++|.+|..+|++++|+.+|++++. .+|....+
T Consensus 193 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~ 272 (378)
T 3q15_A 193 DDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLC 272 (378)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHH
Confidence 999999999999999998743 2356899999999999999999999999999 66665444
Q ss_pred -HHHHHHHHHHHHHHHhhc
Q 013696 188 -KKQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 188 -~~~l~~a~~~~~ka~~~~ 205 (438)
.+++.+|...+++++...
T Consensus 273 ~~g~~~~A~~~~~~al~~~ 291 (378)
T 3q15_A 273 KAGQTQKAFQFIEEGLDHI 291 (378)
T ss_dssp HTTCHHHHHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHHHHHHHH
Confidence 345566666666666543
No 152
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.28 E-value=1.8e-11 Score=118.43 Aligned_cols=167 Identities=11% Similarity=-0.006 Sum_probs=140.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCC--CccchHHHHHhhhcCCCCChhHHHHHHHHHHH---
Q 013696 21 DWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYS--RNYDPVSHISSSLMNEESTPDATSEKELGNEC--- 94 (438)
Q Consensus 21 ~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g--~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~--- 94 (438)
.-++++...++.|...+ ... ......+... .+| ++++++..+..+|..+|.+..+ |+.++.++
T Consensus 48 ~s~~aL~~t~~~L~~nP-~~~--------taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~a--W~~R~~iL~~~ 116 (306)
T 3dra_A 48 YSERALHITELGINELA-SHY--------TIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQI--WNYRQLIIGQI 116 (306)
T ss_dssp CSHHHHHHHHHHHHHCT-TCH--------HHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHH--HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCc-HHH--------HHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHH--HHHHHHHHHHH
Confidence 34567777777776664 111 1111111122 445 8999999999999999999999 77888888
Q ss_pred -HHh---ccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHH--HHHHHHHHHhhcCCccHHHHHHHHHHHHHcCC-
Q 013696 95 -FKQ---KKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQ--EAEDDCTEALNLDDRYIKAYSRRATARKELGK- 166 (438)
Q Consensus 95 -~~~---g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~--eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~- 166 (438)
... +++++++.++.+++..+|. ..+|++++.++..++.++ +++..+++++..+|.|..||+.++.++..+|+
T Consensus 117 ~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~ 196 (306)
T 3dra_A 117 MELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHL 196 (306)
T ss_dssp HHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGG
T ss_pred HHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcccc
Confidence 666 7899999999999999999 999999999999999999 99999999999999999999999999999998
Q ss_pred -----HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 013696 167 -----LKESIEDSEFALRLEPQNQEIKKQLAEVKSLY 198 (438)
Q Consensus 167 -----~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~ 198 (438)
++++++++.+++.++|.|..++..+.-++...
T Consensus 197 ~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~ 233 (306)
T 3dra_A 197 ATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERF 233 (306)
T ss_dssp CCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHT
T ss_pred chhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhc
Confidence 99999999999999999999988777665543
No 153
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.28 E-value=3.3e-11 Score=115.18 Aligned_cols=123 Identities=15% Similarity=0.070 Sum_probs=106.0
Q ss_pred cCCCccchHHHHHhhhcCCCCChh----HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-------HHHHHHHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPD----ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYL 128 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~----a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-------~~~~~~la~~~~ 128 (438)
..|+|++|+..+.+++...+.... ...++.+|..+...|+|++|+.+|.+++.+.+. ..++.++|.+|.
T Consensus 87 ~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 166 (293)
T 2qfc_A 87 KQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA 166 (293)
T ss_dssp HTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence 789999999999999998776542 233567899999999999999999999986532 568999999999
Q ss_pred HhcCHHHHHHHHHHHh---hcCCcc----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 013696 129 KLRRFQEAEDDCTEAL---NLDDRY----IKAYSRRATARKELGKLKESIEDSEFALRLEP 182 (438)
Q Consensus 129 ~l~~~~eA~~~~~~al---~l~p~~----~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P 182 (438)
.+|+|++|+.+|.+++ ...|++ +.+++++|.+|..+|+|++|+.+|++++.+.+
T Consensus 167 ~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 167 ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999 444543 36899999999999999999999999998864
No 154
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.28 E-value=7.7e-13 Score=130.36 Aligned_cols=191 Identities=14% Similarity=0.119 Sum_probs=143.7
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCC--------------------ccchHHH
Q 013696 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSR--------------------NYDPVSH 70 (438)
Q Consensus 12 l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~--------------------~~eAi~~ 70 (438)
+...+..+++|++++....+.+...+... ........+..+|..| ..|+ +++|+..
T Consensus 93 la~~~~~~g~~~~A~~~~~~al~~~~~~~---~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~ 169 (406)
T 3sf4_A 93 LGNTLKVLGNFDEAIVCCQRHLDISRELN---DKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDF 169 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhcc---cccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHH
Confidence 44555666778888777766665442100 0011122334455555 6788 9999999
Q ss_pred HHhhhcCCCC----ChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-------HHHHHHHHHHHHHhcCHHHHHHH
Q 013696 71 ISSSLMNEES----TPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYLKLRRFQEAEDD 139 (438)
Q Consensus 71 ~~~al~~~p~----~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-------~~~~~~la~~~~~l~~~~eA~~~ 139 (438)
|.+++.+.+. ...+..+..+|.+|+..|+|++|+.+|.+++.+.+. ..++.++|.+|..+|++++|+.+
T Consensus 170 ~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 249 (406)
T 3sf4_A 170 YEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEY 249 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 9998875221 122445889999999999999999999999998643 45899999999999999999999
Q ss_pred HHHHhhcCCcc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHH----------HHHHHHHHHH
Q 013696 140 CTEALNLDDRY------IKAYSRRATARKELGKLKESIEDSEFALRLEPQN------QEI----------KKQLAEVKSL 197 (438)
Q Consensus 140 ~~~al~l~p~~------~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~------~~~----------~~~l~~a~~~ 197 (438)
+.+++.+.+.. ..++..+|.++..+|++++|+.+|++++.+.+.. ..+ .+++.+|...
T Consensus 250 ~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 329 (406)
T 3sf4_A 250 YKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHF 329 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 99999887765 7889999999999999999999999999986543 111 5667788888
Q ss_pred HHHHHhhc
Q 013696 198 YEKEVFQK 205 (438)
Q Consensus 198 ~~ka~~~~ 205 (438)
|.+++...
T Consensus 330 ~~~al~~~ 337 (406)
T 3sf4_A 330 AEKHLEIS 337 (406)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88777654
No 155
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.27 E-value=4.6e-12 Score=126.07 Aligned_cols=112 Identities=13% Similarity=0.167 Sum_probs=103.9
Q ss_pred cCCCccchHHHHHhhhc----------------CCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHH
Q 013696 60 SYSRNYDPVSHISSSLM----------------NEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYAN 122 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~----------------~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~ 122 (438)
..|+|++|+..|++++. .+|....+ +.++|.+|++.|+|++|+.+|+++++++|+ +.+|++
T Consensus 235 ~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~--~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~ 312 (370)
T 1ihg_A 235 KSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSC--VLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYR 312 (370)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHH--HHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 78999999999999998 55554445 789999999999999999999999999999 999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHH
Q 013696 123 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIED 173 (438)
Q Consensus 123 la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~ 173 (438)
+|.+|..+|+|++|+.+|++|+.++|++..++..++.++..+++++++...
T Consensus 313 lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 313 RAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999887654
No 156
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.27 E-value=7.5e-12 Score=131.46 Aligned_cols=130 Identities=9% Similarity=-0.009 Sum_probs=121.4
Q ss_pred ccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhc--cHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhc-CHHHHHHH
Q 013696 64 NYDPVSHISSSLMNEESTPDATSEKELGNECFKQK--KFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR-RFQEAEDD 139 (438)
Q Consensus 64 ~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g--~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~-~~~eA~~~ 139 (438)
+++|+..+++++..+|++..+ |..+|+++...| +|++|+.++.++++++|. ..+|.+++.++..+| .+++++++
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~a--W~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~ 166 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGT--WHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAF 166 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHH
Confidence 899999999999999999999 779999999999 779999999999999999 999999999999999 99999999
Q ss_pred HHHHhhcCCccHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 013696 140 CTEALNLDDRYIKAYSRRATARKEL--------------GKLKESIEDSEFALRLEPQNQEIKKQLAEVK 195 (438)
Q Consensus 140 ~~~al~l~p~~~~a~~~lg~a~~~l--------------g~~~eA~~~~~~al~l~P~~~~~~~~l~~a~ 195 (438)
+.++|+.+|.+..||+.+|.++..+ +.+++|++++.+|+.++|++..+|..+.-+.
T Consensus 167 ~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll 236 (567)
T 1dce_A 167 TDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLL 236 (567)
T ss_dssp HHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHH
T ss_pred HHHHHHHCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Confidence 9999999999999999999999986 6689999999999999999998876655433
No 157
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.26 E-value=4.1e-11 Score=114.01 Aligned_cols=125 Identities=15% Similarity=0.090 Sum_probs=112.0
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccC-CC--HHHHHHHHHHHHHhcCHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALS-PT--AVAYANRAMAYLKLRRFQEA 136 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~-p~--~~~~~~la~~~~~l~~~~eA 136 (438)
..|+|++|.+.|..++...|... + .+.+|..+++.++|++|+.+|..++... |. ..+++++|.++..+|++++|
T Consensus 114 ~~g~y~eA~~~l~~~~~~~p~~~-~--~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eA 190 (282)
T 4f3v_A 114 AQGNYADAMEALEAAPVAGSEHL-V--AWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEA 190 (282)
T ss_dssp HHTCHHHHHHHHTSSCCTTCHHH-H--HHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HCCCHHHHHHHHHHHHhcCCchH-H--HHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHH
Confidence 67999999999999999888766 5 7899999999999999999999888764 32 45899999999999999999
Q ss_pred HHHHHHHhhcC--Cc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH
Q 013696 137 EDDCTEALNLD--DR-YIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK 188 (438)
Q Consensus 137 ~~~~~~al~l~--p~-~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~ 188 (438)
+.+|++++... |. .+.+++++|.++..+|+.++|...|++++..+|+ ..+.
T Consensus 191 l~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~ 244 (282)
T 4f3v_A 191 ERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVA 244 (282)
T ss_dssp HHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHH
T ss_pred HHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHH
Confidence 99999998654 65 6789999999999999999999999999999998 6553
No 158
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.26 E-value=3e-11 Score=101.66 Aligned_cols=107 Identities=13% Similarity=0.061 Sum_probs=96.8
Q ss_pred CCCcC-cCCCccchHHHHHhhhcCCCCC---hhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHH
Q 013696 55 SPSGN-SYSRNYDPVSHISSSLMNEEST---PDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLK 129 (438)
Q Consensus 55 ~~~~y-~~g~~~eAi~~~~~al~~~p~~---~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~ 129 (438)
.|..| ..|++++|+..|++++..+|++ ..+ +..+|.+|+..|+|++|+.+|.+++.++|. ..+++++|.+|..
T Consensus 34 ~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~--~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 111 (148)
T 2dba_A 34 EGNELFKCGDYGGALAAYTQALGLDATPQDQAVL--HRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEK 111 (148)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHH--HHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHH
Confidence 33334 8899999999999999999876 444 779999999999999999999999999998 9999999999999
Q ss_pred hcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHH
Q 013696 130 LRRFQEAEDDCTEALNLDDRYIKAYSRRATARKE 163 (438)
Q Consensus 130 l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~ 163 (438)
+|++++|+.+|.+++.++|++..++..++.+...
T Consensus 112 ~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 112 LGRLDQAVLDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp HTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred cCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 9999999999999999999999999888877543
No 159
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.26 E-value=1.7e-11 Score=109.10 Aligned_cols=145 Identities=15% Similarity=0.050 Sum_probs=109.5
Q ss_pred CcCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccC------CC-HHHHHHHHHHHHHhc
Q 013696 59 NSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALS------PT-AVAYANRAMAYLKLR 131 (438)
Q Consensus 59 y~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~------p~-~~~~~~la~~~~~l~ 131 (438)
+..|++++|...++.... +|. ..+..+..+|.+++..|+|++|+.+|.+++.+. +. ..++.++|.+|..+|
T Consensus 3 ~~~g~~~~A~~~~~~~~~-~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 80 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLA-HPA-TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAG 80 (203)
T ss_dssp ----CHHHHHHHHHHHHT-STT-THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred cccccHHHHHHHHHHhcC-ChH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcC
Confidence 356889999995444433 332 234558899999999999999999999999953 22 788999999999999
Q ss_pred CHHHHHHHHHHHhhc------CC-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC--CCHHH--------------H
Q 013696 132 RFQEAEDDCTEALNL------DD-RYIKAYSRRATARKELGKLKESIEDSEFALRLEP--QNQEI--------------K 188 (438)
Q Consensus 132 ~~~eA~~~~~~al~l------~p-~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P--~~~~~--------------~ 188 (438)
++++|+.++.+++.+ ++ ....+++++|.++..+|++++|+.++++++.+.+ ++... .
T Consensus 81 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 160 (203)
T 3gw4_A 81 NWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQE 160 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHC
Confidence 999999999999988 33 3466799999999999999999999999997743 22221 3
Q ss_pred HHHHHHHHHHHHHHhhc
Q 013696 189 KQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 189 ~~l~~a~~~~~ka~~~~ 205 (438)
+++.+|...+.+++.+.
T Consensus 161 g~~~~A~~~~~~al~~~ 177 (203)
T 3gw4_A 161 KNLLEAQQHWLRARDIF 177 (203)
T ss_dssp TCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHH
Confidence 45667777777766544
No 160
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.25 E-value=1.2e-10 Score=113.68 Aligned_cols=124 Identities=10% Similarity=0.012 Sum_probs=116.9
Q ss_pred ccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhcc--HHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcC-HHHHHHH
Q 013696 64 NYDPVSHISSSLMNEESTPDATSEKELGNECFKQKK--FKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRR-FQEAEDD 139 (438)
Q Consensus 64 ~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~--y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~-~~eA~~~ 139 (438)
+.+++.++..++..+|.+..+ |..++.++...|. +++++.++.++++++|. ..+|.+++.+...+|. +++++.+
T Consensus 90 l~~EL~~~~~~L~~~PKny~a--W~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~ 167 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGT--WHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAF 167 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHH--HHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 688999999999999999999 7799999999984 99999999999999998 9999999999999998 6999999
Q ss_pred HHHHhhcCCccHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHhhCCCCHHHHH
Q 013696 140 CTEALNLDDRYIKAYSRRATARKEL--------------GKLKESIEDSEFALRLEPQNQEIKK 189 (438)
Q Consensus 140 ~~~al~l~p~~~~a~~~lg~a~~~l--------------g~~~eA~~~~~~al~l~P~~~~~~~ 189 (438)
+.++|..+|.|..||+.++.++..+ +.++++++++.+++.++|+|..++.
T Consensus 168 ~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~ 231 (331)
T 3dss_A 168 TDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWF 231 (331)
T ss_dssp HHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999999999999999999988 5689999999999999999998863
No 161
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.24 E-value=1.7e-12 Score=123.59 Aligned_cols=168 Identities=18% Similarity=0.160 Sum_probs=104.3
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChh----HHHH
Q 013696 13 QGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPD----ATSE 87 (438)
Q Consensus 13 ~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~----a~~~ 87 (438)
...+...++|++++....+.+...... ...+.....+..+|..| ..|++++|+..+.+++.+.+.... +..+
T Consensus 50 ~~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 126 (338)
T 3ro2_A 50 GNAYFYLHDYAKALEYHHHDLTLARTI---GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARAL 126 (338)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHhhcc---cccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 444444555666655555444322100 00011112223344445 677788888888777765433222 3346
Q ss_pred HHHHHHHHHhcc--------------------HHHHHHHHHHHhccC------CC-HHHHHHHHHHHHHhcCHHHHHHHH
Q 013696 88 KELGNECFKQKK--------------------FKEAIDCYSRSIALS------PT-AVAYANRAMAYLKLRRFQEAEDDC 140 (438)
Q Consensus 88 ~~~g~~~~~~g~--------------------y~~Ai~~y~~al~~~------p~-~~~~~~la~~~~~l~~~~eA~~~~ 140 (438)
..+|.++...|+ +++|+.+|.+++.+. +. ..++.++|.+|..+|++++|+..+
T Consensus 127 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 206 (338)
T 3ro2_A 127 YNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAH 206 (338)
T ss_dssp HHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 677788888887 777877777777652 11 556777788888888888888888
Q ss_pred HHHhhcCCcc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 013696 141 TEALNLDDRY------IKAYSRRATARKELGKLKESIEDSEFALRLEPQ 183 (438)
Q Consensus 141 ~~al~l~p~~------~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~ 183 (438)
.+++.+.+.. ..++..+|.++...|++++|+..+++++.+.+.
T Consensus 207 ~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 255 (338)
T 3ro2_A 207 EQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQ 255 (338)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 8877765432 236777788888888888888888887777554
No 162
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.24 E-value=7.7e-12 Score=124.17 Aligned_cols=151 Identities=15% Similarity=0.119 Sum_probs=126.3
Q ss_pred CCCcC-cCCCccchHHHHHhhhcCCCCChh--HHHHHHHHHHHHHhccHHHHHHHHHHHhcc------CCC-HHHHHHHH
Q 013696 55 SPSGN-SYSRNYDPVSHISSSLMNEESTPD--ATSEKELGNECFKQKKFKEAIDCYSRSIAL------SPT-AVAYANRA 124 (438)
Q Consensus 55 ~~~~y-~~g~~~eAi~~~~~al~~~p~~~~--a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~------~p~-~~~~~~la 124 (438)
.|..| ..|++++|+..|++++...|.+.. +..+..+|.+|+..|+|++|+.+|.+++.+ .|. ..++.++|
T Consensus 54 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~ 133 (411)
T 4a1s_A 54 EGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLG 133 (411)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHH
Confidence 34444 789999999999999999988764 345889999999999999999999999998 344 78899999
Q ss_pred HHHHHhcCHHHHHHHHHHHhhc------CCccHHHHHHHHHHHHHcCC-----------------HHHHHHHHHHHHhhC
Q 013696 125 MAYLKLRRFQEAEDDCTEALNL------DDRYIKAYSRRATARKELGK-----------------LKESIEDSEFALRLE 181 (438)
Q Consensus 125 ~~~~~l~~~~eA~~~~~~al~l------~p~~~~a~~~lg~a~~~lg~-----------------~~eA~~~~~~al~l~ 181 (438)
.+|..+|++++|+.+|.+++.+ .+....++..+|.+|..+|+ +++|+.+|++++.+.
T Consensus 134 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~ 213 (411)
T 4a1s_A 134 NTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLM 213 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998 56778899999999999999 999999999999875
Q ss_pred CCC---H---HH----------HHHHHHHHHHHHHHHhhc
Q 013696 182 PQN---Q---EI----------KKQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 182 P~~---~---~~----------~~~l~~a~~~~~ka~~~~ 205 (438)
+.. . .+ .+++.+|...|.+++...
T Consensus 214 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 253 (411)
T 4a1s_A 214 RDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIA 253 (411)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 311 1 11 345667777777766554
No 163
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.24 E-value=1.5e-10 Score=113.61 Aligned_cols=147 Identities=6% Similarity=-0.036 Sum_probs=132.2
Q ss_pred CCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhc-cHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHh-c-CHHHHH
Q 013696 62 SRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQK-KFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL-R-RFQEAE 137 (438)
Q Consensus 62 g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g-~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l-~-~~~eA~ 137 (438)
+..++|+..+.++|.++|.+..+ |+.+|.++...| .+++++.++..++..+|. ..+|..|+.++..+ + ++++++
T Consensus 68 e~se~AL~lt~~~L~~nP~~yta--Wn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL 145 (349)
T 3q7a_A 68 EKSERALELTEIIVRMNPAHYTV--WQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEI 145 (349)
T ss_dssp CCSHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred CCCHHHHHHHHHHHHhCchhHHH--HHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHH
Confidence 45578999999999999999999 779999999999 599999999999999999 99999999999998 8 999999
Q ss_pred HHHHHHhhcCCccHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHhhCCCCHHHHHH-----------------HH
Q 013696 138 DDCTEALNLDDRYIKAYSRRATARKELGKLK--------ESIEDSEFALRLEPQNQEIKKQ-----------------LA 192 (438)
Q Consensus 138 ~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~--------eA~~~~~~al~l~P~~~~~~~~-----------------l~ 192 (438)
..+.+++.++|.|..+|+.++.++..+|.++ ++++++.+++.++|.|..++.. +.
T Consensus 146 ~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~ 225 (349)
T 3q7a_A 146 EYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAETSSRSLQ 225 (349)
T ss_dssp HHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCCCHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccccchHHHH
Confidence 9999999999999999999999999999998 9999999999999999988433 45
Q ss_pred HHHHHHHHHHhhchhhhh
Q 013696 193 EVKSLYEKEVFQKASKTL 210 (438)
Q Consensus 193 ~a~~~~~ka~~~~~~~~~ 210 (438)
+++..+.+++..++.+..
T Consensus 226 eELe~~~~aI~~~P~n~S 243 (349)
T 3q7a_A 226 DELIYILKSIHLIPHNVS 243 (349)
T ss_dssp HHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHhCCCCHH
Confidence 666677777777765543
No 164
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.24 E-value=7.4e-11 Score=97.29 Aligned_cols=105 Identities=13% Similarity=0.012 Sum_probs=93.3
Q ss_pred cCCCccchHHHHHhhhcCCCCCh---hHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC----HHHHHHHHHHHHHhcC
Q 013696 60 SYSRNYDPVSHISSSLMNEESTP---DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANRAMAYLKLRR 132 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~---~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~----~~~~~~la~~~~~l~~ 132 (438)
..|++++|+..|.+++..+|++. .+ ++.+|.+++..|+|++|+.+|.+++..+|+ +.+++++|.+|..+|+
T Consensus 14 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~--~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~ 91 (129)
T 2xev_A 14 KNGKYDDASQLFLSFLELYPNGVYTPNA--LYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGK 91 (129)
T ss_dssp HTTCHHHHHHHHHHHHHHCSSSTTHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTC
T ss_pred HhCCHHHHHHHHHHHHHHCCCCcccHHH--HHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCC
Confidence 78999999999999999999887 45 779999999999999999999999999987 6779999999999999
Q ss_pred HHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCC
Q 013696 133 FQEAEDDCTEALNLDDRYIKAYSRRATARKELGK 166 (438)
Q Consensus 133 ~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~ 166 (438)
+++|+..|++++...|++..+...+..+....++
T Consensus 92 ~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~~ 125 (129)
T 2xev_A 92 NTEAQQTLQQVATQYPGSDAARVAQERLQSIRLG 125 (129)
T ss_dssp HHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHhh
Confidence 9999999999999999998887766655554443
No 165
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.23 E-value=1.3e-11 Score=104.68 Aligned_cols=124 Identities=18% Similarity=0.196 Sum_probs=98.0
Q ss_pred cCCCccchHHHHHhhhcCCCCCh----hHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-------HHHHHHHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTP----DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYL 128 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~----~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-------~~~~~~la~~~~ 128 (438)
..|++++|+.++.+++...+... .+..+..+|.+++..|+|++|+.+|.+++.+.+. ..++.++|.++.
T Consensus 21 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~ 100 (164)
T 3ro3_A 21 LLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT 100 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 67888899999988887653322 2344778899999999999999999998887432 567888899999
Q ss_pred HhcCHHHHHHHHHHHhhcCC------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 013696 129 KLRRFQEAEDDCTEALNLDD------RYIKAYSRRATARKELGKLKESIEDSEFALRLEPQ 183 (438)
Q Consensus 129 ~l~~~~eA~~~~~~al~l~p------~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~ 183 (438)
.+|++++|+..+.+++.+.+ ....++..+|.++..+|++++|+.++++++.+...
T Consensus 101 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 101 LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999887632 23567888899999999999999999988877544
No 166
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.22 E-value=7.4e-11 Score=96.03 Aligned_cols=100 Identities=12% Similarity=0.113 Sum_probs=87.6
Q ss_pred cchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 013696 65 YDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEA 143 (438)
Q Consensus 65 ~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~a 143 (438)
.+|+..|.+++..+|++..+ ++.+|.+|+..|+|++|+.+|.+++.++|. ..+|+++|.+|..+|++++|+..|+++
T Consensus 2 ~~a~~~~~~al~~~p~~~~~--~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~a 79 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLL--RFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESG 79 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHH--HHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 57899999999999998887 779999999999999999999999999999 999999999999999999999999999
Q ss_pred hhcCCcc--HHHHHHHHHHHHHcCC
Q 013696 144 LNLDDRY--IKAYSRRATARKELGK 166 (438)
Q Consensus 144 l~l~p~~--~~a~~~lg~a~~~lg~ 166 (438)
+.++|.. ..+...+...+..+|+
T Consensus 80 l~~~~~~~~~~~~~~l~~~l~~l~~ 104 (115)
T 2kat_A 80 LAAAQSRGDQQVVKELQVFLRRLAR 104 (115)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHhccccccHHHHHHHHHHHHHhcc
Confidence 9998853 4555555555554443
No 167
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.20 E-value=1.5e-10 Score=105.52 Aligned_cols=113 Identities=10% Similarity=-0.055 Sum_probs=52.1
Q ss_pred CccchHHHHHhhhcCCCCChhHHHHHHHHHHHHH----hccHHHHHHHHHHHhccCCC---HHHHHHHHHHHHH----hc
Q 013696 63 RNYDPVSHISSSLMNEESTPDATSEKELGNECFK----QKKFKEAIDCYSRSIALSPT---AVAYANRAMAYLK----LR 131 (438)
Q Consensus 63 ~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~----~g~y~~Ai~~y~~al~~~p~---~~~~~~la~~~~~----l~ 131 (438)
++++|+.+|+++... .++.+ ++.+|.+|.. .+++++|+.+|.+++...+. +.+++++|.+|.. .+
T Consensus 68 ~~~~A~~~~~~A~~~--g~~~a--~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~ 143 (212)
T 3rjv_A 68 DYPQARQLAEKAVEA--GSKSG--EIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPE 143 (212)
T ss_dssp CHHHHHHHHHHHHHT--TCHHH--HHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSC
T ss_pred CHHHHHHHHHHHHHC--CCHHH--HHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCC
Confidence 444455555444332 23333 3344444444 44455555555555444442 4444445555444 44
Q ss_pred CHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHc-C-----CHHHHHHHHHHHHhh
Q 013696 132 RFQEAEDDCTEALNLDDRYIKAYSRRATARKEL-G-----KLKESIEDSEFALRL 180 (438)
Q Consensus 132 ~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~l-g-----~~~eA~~~~~~al~l 180 (438)
++++|+.+|++++.+ +.++.+++++|.+|... | ++++|+.+|+++...
T Consensus 144 d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~ 197 (212)
T 3rjv_A 144 DDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLE 197 (212)
T ss_dssp CHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHc
Confidence 455555555555444 33344444455444432 2 444555555544444
No 168
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.20 E-value=8.3e-11 Score=107.22 Aligned_cols=145 Identities=8% Similarity=-0.084 Sum_probs=121.2
Q ss_pred CCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhc----cHHHHHHHHHHHhccCCC-HHHHHHHHHH
Q 013696 53 KPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQK----KFKEAIDCYSRSIALSPT-AVAYANRAMA 126 (438)
Q Consensus 53 ~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g----~y~~Ai~~y~~al~~~p~-~~~~~~la~~ 126 (438)
..+|..| ..+++++|+.+|++++... ++.+ ++.+|.+|.. + ++++|+.+|.+++. +. +.+++++|.+
T Consensus 22 ~~lg~~~~~~~~~~~A~~~~~~a~~~g--~~~a--~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~ 94 (212)
T 3rjv_A 22 YYLADTWVSSGDYQKAEYWAQKAAAQG--DGDA--LALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLARV 94 (212)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHTT--CHHH--HHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHcC--CHHH--HHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHH
Confidence 3345555 6789999999999998764 5666 7799999998 7 99999999999965 44 8999999999
Q ss_pred HHH----hcCHHHHHHHHHHHhhcCC--ccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHH-------
Q 013696 127 YLK----LRRFQEAEDDCTEALNLDD--RYIKAYSRRATARKE----LGKLKESIEDSEFALRLEPQNQEIKK------- 189 (438)
Q Consensus 127 ~~~----l~~~~eA~~~~~~al~l~p--~~~~a~~~lg~a~~~----lg~~~eA~~~~~~al~l~P~~~~~~~------- 189 (438)
|.. .+++++|+.+|++++..++ .++.+++++|.+|.. .+++++|+.+|++++.+ |+++.+..
T Consensus 95 y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~ 173 (212)
T 3rjv_A 95 LVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQ 173 (212)
T ss_dssp HTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHH
T ss_pred HHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHH
Confidence 998 8899999999999999998 569999999999999 88999999999999999 55554421
Q ss_pred ---------HHHHHHHHHHHHHhhc
Q 013696 190 ---------QLAEVKSLYEKEVFQK 205 (438)
Q Consensus 190 ---------~l~~a~~~~~ka~~~~ 205 (438)
++.+|..+|+++....
T Consensus 174 ~g~gg~~~~d~~~A~~~~~~A~~~g 198 (212)
T 3rjv_A 174 QGEKGFIEPNKQKALHWLNVSCLEG 198 (212)
T ss_dssp HCBTTTBCCCHHHHHHHHHHHHHHT
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 4667777777776654
No 169
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.19 E-value=2.2e-10 Score=118.69 Aligned_cols=143 Identities=9% Similarity=-0.001 Sum_probs=125.7
Q ss_pred CCCcc-------chHHHHHhhhc-CCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-H-HHHHHHHHHHHHh
Q 013696 61 YSRNY-------DPVSHISSSLM-NEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-A-VAYANRAMAYLKL 130 (438)
Q Consensus 61 ~g~~~-------eAi~~~~~al~-~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~-~~~~~la~~~~~l 130 (438)
.|+++ +|+..|++++. ..|++... |..+|..+...|++++|...|++++++.|. + .+|.++|.++...
T Consensus 292 ~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l--~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~ 369 (530)
T 2ooe_A 292 KGDMNNAKLFSDEAANIYERAISTLLKKNMLL--YFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRA 369 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHhCcccHHH--HHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHh
Confidence 68887 99999999997 78988877 779999999999999999999999999997 4 6899999999999
Q ss_pred cCHHHHHHHHHHHhhcCCccHHHHHHHHHH-HHHcCCHHHHHHHHHHHHhhCCCCHHHH----------HHHHHHHHHHH
Q 013696 131 RRFQEAEDDCTEALNLDDRYIKAYSRRATA-RKELGKLKESIEDSEFALRLEPQNQEIK----------KQLAEVKSLYE 199 (438)
Q Consensus 131 ~~~~eA~~~~~~al~l~p~~~~a~~~lg~a-~~~lg~~~eA~~~~~~al~l~P~~~~~~----------~~l~~a~~~~~ 199 (438)
|++++|...|.+|+...|.....+...|.+ +...|++++|...|++++++.|+++.++ ++..+|...|+
T Consensus 370 ~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~ 449 (530)
T 2ooe_A 370 EGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFE 449 (530)
T ss_dssp HHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHH
Confidence 999999999999999999888888777765 4469999999999999999999998874 44566777777
Q ss_pred HHHhhc
Q 013696 200 KEVFQK 205 (438)
Q Consensus 200 ka~~~~ 205 (438)
+++...
T Consensus 450 ~al~~~ 455 (530)
T 2ooe_A 450 RVLTSG 455 (530)
T ss_dssp HHHHSC
T ss_pred HHHhcc
Confidence 777653
No 170
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.19 E-value=3e-11 Score=114.83 Aligned_cols=146 Identities=17% Similarity=0.185 Sum_probs=120.3
Q ss_pred cCCCccchHHHHHhhhcCCCCChh--HHHHHHHHHHHHHhccHHHHHHHHHHHhccC------CC-HHHHHHHHHHHHHh
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPD--ATSEKELGNECFKQKKFKEAIDCYSRSIALS------PT-AVAYANRAMAYLKL 130 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~--a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~------p~-~~~~~~la~~~~~l 130 (438)
..|++++|+..|++++...|.+.. +..+..+|.+++..|+|++|+.+|.+++.+. |. ..++.++|.+|..+
T Consensus 17 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~ 96 (338)
T 3ro2_A 17 KSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVL 96 (338)
T ss_dssp HTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHc
Confidence 789999999999999999988764 3457899999999999999999999999873 33 78899999999999
Q ss_pred cCHHHHHHHHHHHhhcCCcc------HHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHhhCCC-
Q 013696 131 RRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGK--------------------LKESIEDSEFALRLEPQ- 183 (438)
Q Consensus 131 ~~~~eA~~~~~~al~l~p~~------~~a~~~lg~a~~~lg~--------------------~~eA~~~~~~al~l~P~- 183 (438)
|++++|+..+.+++.+.+.. ..++..+|.++..+|+ +++|+..+++++.+.+.
T Consensus 97 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~ 176 (338)
T 3ro2_A 97 GNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTAL 176 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999886543 4589999999999999 99999999999877421
Q ss_pred --C---HHH----------HHHHHHHHHHHHHHHhhc
Q 013696 184 --N---QEI----------KKQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 184 --~---~~~----------~~~l~~a~~~~~ka~~~~ 205 (438)
. ..+ .+++.+|...+.+++...
T Consensus 177 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 213 (338)
T 3ro2_A 177 GDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIA 213 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 1 111 345566666666665543
No 171
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.19 E-value=8e-11 Score=115.48 Aligned_cols=174 Identities=14% Similarity=0.047 Sum_probs=142.8
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCC-CccchHHHHHhhhcCCCCChhHHHHH
Q 013696 11 DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYS-RNYDPVSHISSSLMNEESTPDATSEK 88 (438)
Q Consensus 11 ~l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g-~~~eAi~~~~~al~~~p~~~~a~~~~ 88 (438)
.++..++..+.-++++...++.+...+... ......+..+ .+| .+++++..+..+|..+|++..+ |.
T Consensus 59 ~~r~~~~~~e~se~AL~lt~~~L~~nP~~y---------taWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~a--W~ 127 (349)
T 3q7a_A 59 YFRAIAAKEEKSERALELTEIIVRMNPAHY---------TVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQV--WH 127 (349)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHHHCTTCH---------HHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHH--HH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHhCchhH---------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHH--HH
Confidence 334444555555677888888877665111 1111111122 445 5999999999999999999999 77
Q ss_pred HHHHHHHHh-c-cHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHH--------HHHHHHHHHhhcCCccHHHHHHH
Q 013696 89 ELGNECFKQ-K-KFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQ--------EAEDDCTEALNLDDRYIKAYSRR 157 (438)
Q Consensus 89 ~~g~~~~~~-g-~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~--------eA~~~~~~al~l~p~~~~a~~~l 157 (438)
.++.++... + ++++++.++.+++..+|. ..+|..++.++..++.++ +++.++++++..+|.|..||+.+
T Consensus 128 hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R 207 (349)
T 3q7a_A 128 HRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWR 207 (349)
T ss_dssp HHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 999999988 7 999999999999999998 999999999999999888 99999999999999999999999
Q ss_pred HHHHHHcCC-------HHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 013696 158 ATARKELGK-------LKESIEDSEFALRLEPQNQEIKKQLAEVK 195 (438)
Q Consensus 158 g~a~~~lg~-------~~eA~~~~~~al~l~P~~~~~~~~l~~a~ 195 (438)
+.++..+|+ ++++++++.+++.++|+|..++..+.-.+
T Consensus 208 ~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr~Ll 252 (349)
T 3q7a_A 208 WYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLRGFL 252 (349)
T ss_dssp HHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 999999997 79999999999999999999987665443
No 172
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.16 E-value=3e-11 Score=98.94 Aligned_cols=104 Identities=13% Similarity=0.157 Sum_probs=94.6
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC--------HHHHHHHHHHHHHhc
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT--------AVAYANRAMAYLKLR 131 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~--------~~~~~~la~~~~~l~ 131 (438)
..|++++|+..|.+++..+|.+..+ +..+|.+++..|+|++|+.+|.+++.+.|. ..+++++|.+|..+|
T Consensus 16 ~~~~~~~A~~~~~~a~~~~~~~~~~--~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 93 (131)
T 1elr_A 16 KKKDFDTALKHYDKAKELDPTNMTY--ITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEE 93 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HhcCHHHHHHHHHHHHhcCCccHHH--HHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999988877 779999999999999999999999999764 678999999999999
Q ss_pred CHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCC
Q 013696 132 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGK 166 (438)
Q Consensus 132 ~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~ 166 (438)
++++|+.+|.+++.++| +...+..++.++..+++
T Consensus 94 ~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 94 KYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp CHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 99999999999999999 68888888888776543
No 173
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.16 E-value=2.9e-10 Score=87.62 Aligned_cols=80 Identities=33% Similarity=0.488 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHc
Q 013696 86 SEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKEL 164 (438)
Q Consensus 86 ~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~l 164 (438)
.+..+|.+++..|+|++|+.+|.+++.++|. ..+++++|.+|..+|++++|+.+|++++.++|+++.++.++|.++..+
T Consensus 11 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~ 90 (91)
T 1na3_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 90 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhc
Confidence 3667777777777777777777777777777 777777777777777777777777777777777777777777777665
Q ss_pred C
Q 013696 165 G 165 (438)
Q Consensus 165 g 165 (438)
|
T Consensus 91 g 91 (91)
T 1na3_A 91 G 91 (91)
T ss_dssp C
T ss_pred C
Confidence 4
No 174
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.15 E-value=4.3e-11 Score=106.50 Aligned_cols=130 Identities=12% Similarity=0.056 Sum_probs=108.2
Q ss_pred CCCCCcC-cCCCccchHHHHHhhhcCCC----CChhHHHHHHHHHHHHHhccHHHHHHHHHHHhcc------CC-C-HHH
Q 013696 53 KPSPSGN-SYSRNYDPVSHISSSLMNEE----STPDATSEKELGNECFKQKKFKEAIDCYSRSIAL------SP-T-AVA 119 (438)
Q Consensus 53 ~~~~~~y-~~g~~~eAi~~~~~al~~~p----~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~------~p-~-~~~ 119 (438)
..+|..| ..|++++|+.+|.+++.+.. ....+..+..+|.++...|++++|+.+|.+++.+ ++ . ..+
T Consensus 30 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 109 (203)
T 3gw4_A 30 FMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASAN 109 (203)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHH
Confidence 4455555 88999999999999998321 1123455889999999999999999999999998 33 2 678
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCc------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 013696 120 YANRAMAYLKLRRFQEAEDDCTEALNLDDR------YIKAYSRRATARKELGKLKESIEDSEFALRLEP 182 (438)
Q Consensus 120 ~~~la~~~~~l~~~~eA~~~~~~al~l~p~------~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P 182 (438)
+.++|.++..+|++++|+..+.+++.+.+. ...++..+|.++..+|++++|+.++++++.+..
T Consensus 110 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 110 AYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999976422 134578999999999999999999999998864
No 175
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.15 E-value=4.9e-11 Score=94.17 Aligned_cols=85 Identities=16% Similarity=0.329 Sum_probs=57.9
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhcCCccHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH--HHHHHHHHH
Q 013696 121 ANRAMAYLKLRRFQEAEDDCTEALNLDDRYIK-AYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK--KQLAEVKSL 197 (438)
Q Consensus 121 ~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~-a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~--~~l~~a~~~ 197 (438)
+++|.++...|+|++|+..|++++.++|+++. +|+.+|.++..+|++++|+.+|++++.++|++..++ ..+.++...
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~a~~~ 83 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQARKMVMDILNF 83 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 45666667777777777777777777777766 777777777777777777777777777777766665 666666666
Q ss_pred HHHHHhhc
Q 013696 198 YEKEVFQK 205 (438)
Q Consensus 198 ~~ka~~~~ 205 (438)
|.+.+...
T Consensus 84 ~~~~~~~~ 91 (99)
T 2kc7_A 84 YNKDMYNQ 91 (99)
T ss_dssp HCCTTHHH
T ss_pred HHHHhccC
Confidence 66555444
No 176
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.14 E-value=1.4e-10 Score=91.46 Aligned_cols=90 Identities=17% Similarity=0.166 Sum_probs=82.7
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHhccCCC-HH-HHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcC
Q 013696 88 KELGNECFKQKKFKEAIDCYSRSIALSPT-AV-AYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG 165 (438)
Q Consensus 88 ~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~-~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg 165 (438)
+.+|..++..|+|++|+.+|.++++.+|. +. +++++|.+|..+|++++|+.+|++++.++|++..++++ +
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~ 75 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------K 75 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------H
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------H
Confidence 47899999999999999999999999998 88 99999999999999999999999999999999988855 6
Q ss_pred CHHHHHHHHHHHHhhCCCCH
Q 013696 166 KLKESIEDSEFALRLEPQNQ 185 (438)
Q Consensus 166 ~~~eA~~~~~~al~l~P~~~ 185 (438)
.+.+|+..|++++.++|++.
T Consensus 76 ~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 76 MVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HHHHHHHHHCCTTHHHHCCS
T ss_pred HHHHHHHHHHHHhccCcccc
Confidence 67888999999888888763
No 177
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.13 E-value=1.5e-10 Score=97.86 Aligned_cols=121 Identities=17% Similarity=0.207 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-------HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcc------
Q 013696 84 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY------ 150 (438)
Q Consensus 84 a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-------~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~------ 150 (438)
+..+..+|.+++..|+|++|+.+|.+++.+.+. ..++.++|.+|..+|++++|+.++.+++.+.+..
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 455889999999999999999999999998643 4689999999999999999999999999886543
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--HH----H----------HHHHHHHHHHHHHHHhh
Q 013696 151 IKAYSRRATARKELGKLKESIEDSEFALRLEPQN--QE----I----------KKQLAEVKSLYEKEVFQ 204 (438)
Q Consensus 151 ~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~--~~----~----------~~~l~~a~~~~~ka~~~ 204 (438)
..+++++|.++..+|++++|+.++++++.+.+.. .. + .+++.+|...+.+++..
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 158 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI 158 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999885322 11 1 34555666666665544
No 178
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.11 E-value=1e-10 Score=93.11 Aligned_cols=97 Identities=14% Similarity=0.119 Sum_probs=88.7
Q ss_pred CCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC---HHHHHHHHHHH
Q 013696 52 KKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT---AVAYANRAMAY 127 (438)
Q Consensus 52 ~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~---~~~~~~la~~~ 127 (438)
+..+|..| ..|++++|+..|.+++..+|.+..+ +..+|.+++..|+|++|+.+|.++++++|. ..++.++|.++
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~--~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~ 86 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKY--WLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADAL 86 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHH--HHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHH
Confidence 34455555 8899999999999999999988877 779999999999999999999999999987 78899999999
Q ss_pred HHh-cCHHHHHHHHHHHhhcCCcc
Q 013696 128 LKL-RRFQEAEDDCTEALNLDDRY 150 (438)
Q Consensus 128 ~~l-~~~~eA~~~~~~al~l~p~~ 150 (438)
..+ |++++|+.++++++...|.+
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 87 RYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp TTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHhCCHHHHHHHHHHHhhcccCC
Confidence 999 99999999999999999875
No 179
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.11 E-value=4.2e-10 Score=107.05 Aligned_cols=117 Identities=14% Similarity=0.081 Sum_probs=98.7
Q ss_pred HHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcc--HHHHHHHHHHHHHcCC
Q 013696 90 LGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY--IKAYSRRATARKELGK 166 (438)
Q Consensus 90 ~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~--~~a~~~lg~a~~~lg~ 166 (438)
++..+...|+|++|.+.|..++...|. . +++.+|.+++..++|++|+..|+.++...+.. ..+++.+|.++..+|+
T Consensus 108 yA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~ 186 (282)
T 4f3v_A 108 FAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLAL 186 (282)
T ss_dssp HHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCC
Confidence 456788899999999999999988888 6 99999999999999999999999888764322 4589999999999999
Q ss_pred HHHHHHHHHHHHhhC--CC-CHHH----------HHHHHHHHHHHHHHHhhchh
Q 013696 167 LKESIEDSEFALRLE--PQ-NQEI----------KKQLAEVKSLYEKEVFQKAS 207 (438)
Q Consensus 167 ~~eA~~~~~~al~l~--P~-~~~~----------~~~l~~a~~~~~ka~~~~~~ 207 (438)
+++|+.+|++++.-. |. ..++ .++..+|...|++++..++.
T Consensus 187 ~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 187 FTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 999999999998654 54 3333 57778999999999888865
No 180
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.09 E-value=5.3e-10 Score=115.85 Aligned_cols=139 Identities=14% Similarity=0.080 Sum_probs=122.9
Q ss_pred chHHHHHhhhcCCCCChhHHHHHHHHHHHHH-------hccHH-------HHHHHHHHHhc-cCCC-HHHHHHHHHHHHH
Q 013696 66 DPVSHISSSLMNEESTPDATSEKELGNECFK-------QKKFK-------EAIDCYSRSIA-LSPT-AVAYANRAMAYLK 129 (438)
Q Consensus 66 eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~-------~g~y~-------~Ai~~y~~al~-~~p~-~~~~~~la~~~~~ 129 (438)
.|+..|++++..+|.++.+ |..+|..+.. .|+++ +|+..|.+++. +.|+ ..+|.++|..+..
T Consensus 256 ~a~~~y~~al~~~p~~~~~--w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~ 333 (530)
T 2ooe_A 256 RVMFAYEQCLLVLGHHPDI--WYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEES 333 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHH--HHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHH--HHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHh
Confidence 6788999999999999888 7799999886 79987 99999999998 8998 9999999999999
Q ss_pred hcCHHHHHHHHHHHhhcCCccH-HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH-----------HHHHHHHHHH
Q 013696 130 LRRFQEAEDDCTEALNLDDRYI-KAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI-----------KKQLAEVKSL 197 (438)
Q Consensus 130 l~~~~eA~~~~~~al~l~p~~~-~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~-----------~~~l~~a~~~ 197 (438)
.|++++|...|++++.++|.++ .+|..+|.++...|++++|+..|++++...|..... .++..+|...
T Consensus 334 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~ 413 (530)
T 2ooe_A 334 RMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKI 413 (530)
T ss_dssp TTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred cCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHH
Confidence 9999999999999999999986 699999999999999999999999999998876443 2335677888
Q ss_pred HHHHHhhch
Q 013696 198 YEKEVFQKA 206 (438)
Q Consensus 198 ~~ka~~~~~ 206 (438)
|++++...+
T Consensus 414 ~e~al~~~p 422 (530)
T 2ooe_A 414 FELGLKKYG 422 (530)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHCC
Confidence 888877654
No 181
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.08 E-value=1.6e-09 Score=83.28 Aligned_cols=80 Identities=34% Similarity=0.408 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 013696 117 AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKS 196 (438)
Q Consensus 117 ~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (438)
+.+++++|.++...|++++|+.+|.+++.++|+++.+++.+|.++...|++++|+.+|++++.++|++..++..+..+..
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 88 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 88 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 77899999999999999999999999999999999999999999999999999999999999999999988777766543
No 182
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.08 E-value=5.9e-10 Score=88.85 Aligned_cols=71 Identities=15% Similarity=0.191 Sum_probs=61.8
Q ss_pred CCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 013696 114 SPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN 184 (438)
Q Consensus 114 ~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~ 184 (438)
+|+ +.+++++|.+|..+|+|++|+.+|++++.++|+++.+|+.+|.+|..+|++++|+..|++++.+.|.+
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 566 88899999999999999999999999999999999999999999999999999999999999887643
No 183
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.06 E-value=1.6e-09 Score=86.54 Aligned_cols=68 Identities=18% Similarity=0.207 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 013696 117 AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN 184 (438)
Q Consensus 117 ~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~ 184 (438)
+.+++++|.++...|+|++|+..|++++.++|+++.+|+++|.++..+|++++|+.+|++++.++|++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 56789999999999999999999999999999999999999999999999999999999999999998
No 184
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.05 E-value=1.1e-09 Score=107.60 Aligned_cols=145 Identities=10% Similarity=0.002 Sum_probs=118.4
Q ss_pred cCCCccchHHHHHhhhcCCCCChh---HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-------HHHHHHHHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPD---ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYLK 129 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~---a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-------~~~~~~la~~~~~ 129 (438)
..|++++|+..+++++...|.... +..+..+|.+++..|++++|+.+|.+++.+.|. ..++.++|.++..
T Consensus 26 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 105 (373)
T 1hz4_A 26 NDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFA 105 (373)
T ss_dssp HTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 678999999999999998765532 334779999999999999999999999997653 3557899999999
Q ss_pred hcCHHHHHHHHHHHhhcC--------CccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-----HH---------
Q 013696 130 LRRFQEAEDDCTEALNLD--------DRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQ-----EI--------- 187 (438)
Q Consensus 130 l~~~~eA~~~~~~al~l~--------p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~-----~~--------- 187 (438)
.|++++|+..|++++.+. |....++.++|.++...|++++|...+++++.+.+... .+
T Consensus 106 ~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~ 185 (373)
T 1hz4_A 106 QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSL 185 (373)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHH
Confidence 999999999999999875 44567888999999999999999999999999987531 11
Q ss_pred -HHHHHHHHHHHHHHHhh
Q 013696 188 -KKQLAEVKSLYEKEVFQ 204 (438)
Q Consensus 188 -~~~l~~a~~~~~ka~~~ 204 (438)
.+++.+|...+.+++..
T Consensus 186 ~~g~~~~A~~~l~~a~~~ 203 (373)
T 1hz4_A 186 ARGDLDNARSQLNRLENL 203 (373)
T ss_dssp HHTCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHH
Confidence 34555666666665543
No 185
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.98 E-value=1.9e-09 Score=85.82 Aligned_cols=87 Identities=17% Similarity=0.246 Sum_probs=72.4
Q ss_pred CCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcc--HHHH
Q 013696 78 EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY--IKAY 154 (438)
Q Consensus 78 ~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~--~~a~ 154 (438)
+|+++.+ ++.+|.+|+..|+|++|+.+|+++++++|+ +.+|+++|.+|..+|++++|+..|++++.+.|.. ..+.
T Consensus 3 ~p~~~~~--~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~ 80 (100)
T 3ma5_A 3 DPEDPFT--RYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDL 80 (100)
T ss_dssp --CCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred CccCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHH
Confidence 5777777 779999999999999999999999999999 9999999999999999999999999999987643 4444
Q ss_pred HHHHHHHHHcCC
Q 013696 155 SRRATARKELGK 166 (438)
Q Consensus 155 ~~lg~a~~~lg~ 166 (438)
..+..++...+.
T Consensus 81 ~~l~~~l~~~~~ 92 (100)
T 3ma5_A 81 SELQDAKLKAEG 92 (100)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHccc
Confidence 455555544433
No 186
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.93 E-value=3.4e-09 Score=109.02 Aligned_cols=119 Identities=9% Similarity=-0.043 Sum_probs=93.8
Q ss_pred cCCCccchHHHHHhhhcC-----CCCChh-HHHHHHHHHHHHHhccHHHHHHHHHHHhccC-----CC----HHHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMN-----EESTPD-ATSEKELGNECFKQKKFKEAIDCYSRSIALS-----PT----AVAYANRA 124 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~-----~p~~~~-a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~-----p~----~~~~~~la 124 (438)
.+|+|++|+..|+++|.+ .|+++. +..+.++|.+|..+|+|++|+.+|.+++.+. |+ +..+.|+|
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 400 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAG 400 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 678889999999888873 344443 5557889999999999999999999988763 32 67788999
Q ss_pred HHHHHhcCHHHHHHHHHHHhhc-----CCcc---HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 013696 125 MAYLKLRRFQEAEDDCTEALNL-----DDRY---IKAYSRRATARKELGKLKESIEDSEFAL 178 (438)
Q Consensus 125 ~~~~~l~~~~eA~~~~~~al~l-----~p~~---~~a~~~lg~a~~~lg~~~eA~~~~~~al 178 (438)
.+|..+|+|++|+..|++|+.+ .|++ ......++.++..+|+|++|...|.++.
T Consensus 401 ~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~ 462 (490)
T 3n71_A 401 LTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMR 462 (490)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998865 4554 4456788888888888888888887763
No 187
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.89 E-value=1.9e-08 Score=85.23 Aligned_cols=111 Identities=12% Similarity=-0.007 Sum_probs=100.4
Q ss_pred CCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCCHHHHHHHHHHHHH----hcCHHHHH
Q 013696 62 SRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLK----LRRFQEAE 137 (438)
Q Consensus 62 g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~~~~~~~la~~~~~----l~~~~eA~ 137 (438)
+++++|+.+|+++.... ++.+ . +|..|...+.+++|+.+|+++.+. .++.+++++|.+|.. .+++++|+
T Consensus 9 ~d~~~A~~~~~~aa~~g--~~~a--~--lg~~y~~g~~~~~A~~~~~~Aa~~-g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 9 KDLKKAIQYYVKACELN--EMFG--C--LSLVSNSQINKQKLFQYLSKACEL-NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHTT--CTTH--H--HHHHTCTTSCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHcCC--CHhh--h--HHHHHHcCCCHHHHHHHHHHHHcC-CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 46889999999999876 4455 3 899999999999999999999986 348999999999999 89999999
Q ss_pred HHHHHHhhcCCccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhC
Q 013696 138 DDCTEALNLDDRYIKAYSRRATARKE----LGKLKESIEDSEFALRLE 181 (438)
Q Consensus 138 ~~~~~al~l~p~~~~a~~~lg~a~~~----lg~~~eA~~~~~~al~l~ 181 (438)
.+|++|... .++.+++++|.+|.. .+++++|+.+|+++.+..
T Consensus 82 ~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 82 QYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC
Confidence 999999987 679999999999999 999999999999999884
No 188
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.86 E-value=4e-09 Score=107.43 Aligned_cols=126 Identities=10% Similarity=-0.004 Sum_probs=96.3
Q ss_pred CCCCCcC-cCC---CccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHh----ccHHHHHHHHHHHhccCCC-HHHHHHH
Q 013696 53 KPSPSGN-SYS---RNYDPVSHISSSLMNEESTPDATSEKELGNECFKQ----KKFKEAIDCYSRSIALSPT-AVAYANR 123 (438)
Q Consensus 53 ~~~~~~y-~~g---~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~----g~y~~Ai~~y~~al~~~p~-~~~~~~l 123 (438)
..+|..| ..| ++.+|+.+|+++....+..... ++.+|.+|... +++++|+.+|+++. |. +.+++++
T Consensus 180 ~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~--~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~L 254 (452)
T 3e4b_A 180 VELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQR--VDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSL 254 (452)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHH--HHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHH
T ss_pred HHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHH--HHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHH
Confidence 3444455 566 7888888888888887665554 56888888665 68888888888887 65 8888888
Q ss_pred HHH-H--HHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHhhCCCCHHHHH
Q 013696 124 AMA-Y--LKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG-----KLKESIEDSEFALRLEPQNQEIKK 189 (438)
Q Consensus 124 a~~-~--~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg-----~~~eA~~~~~~al~l~P~~~~~~~ 189 (438)
|.+ | ...+++++|+.+|++++.. .++.+++++|.+|. .| ++++|+.+|+++. |+++.+..
T Consensus 255 g~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~ 322 (452)
T 3e4b_A 255 AQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADY 322 (452)
T ss_dssp HHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHH
Confidence 888 4 4677888888888888865 47888888888887 55 8888888888888 77777643
No 189
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.85 E-value=1.3e-08 Score=103.59 Aligned_cols=166 Identities=9% Similarity=-0.017 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcCc-----CCCccchHHHHHhhhcCCCCChhHHHHHHHHHH-H
Q 013696 21 DWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGNS-----YSRNYDPVSHISSSLMNEESTPDATSEKELGNE-C 94 (438)
Q Consensus 21 ~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~-----~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~-~ 94 (438)
++++++....+.....+... ..+..+|..|. .+++++|+.+|+++. |.++.+ ++.+|.+ +
T Consensus 194 ~~~~A~~~~~~aa~~g~~~a---------~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a--~~~Lg~~~~ 259 (452)
T 3e4b_A 194 QQAELLKQMEAGVSRGTVTA---------QRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPAS--WVSLAQLLY 259 (452)
T ss_dssp HHHHHHHHHHHHHHTTCSCH---------HHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHH--HHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHH---------HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHH--HHHHHHHHH
Confidence 66777776666665443111 01122444442 268999999999998 777888 6799998 4
Q ss_pred --HHhccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHhc-----CHHHHHHHHHHHhhcCCccHHHHHHHHHHHHH----
Q 013696 95 --FKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLR-----RFQEAEDDCTEALNLDDRYIKAYSRRATARKE---- 163 (438)
Q Consensus 95 --~~~g~y~~Ai~~y~~al~~~p~~~~~~~la~~~~~l~-----~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~---- 163 (438)
...+++++|+.+|+++++.. .+.+++++|.+|. .| ++++|+.+|+++. +.++.+++++|.+|..
T Consensus 260 ~~~~~~d~~~A~~~~~~Aa~~g-~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~ 334 (452)
T 3e4b_A 260 DFPELGDVEQMMKYLDNGRAAD-QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRRGYLG 334 (452)
T ss_dssp HSGGGCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTS
T ss_pred hCCCCCCHHHHHHHHHHHHHCC-CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCC
Confidence 56899999999999998654 4899999999998 56 9999999999999 8999999999999887
Q ss_pred cCCHHHHHHHHHHHHhhCCCCHHH------------HHHHHHHHHHHHHHHhhc
Q 013696 164 LGKLKESIEDSEFALRLEPQNQEI------------KKQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 164 lg~~~eA~~~~~~al~l~P~~~~~------------~~~l~~a~~~~~ka~~~~ 205 (438)
..++++|+.+|+++.......... ..++.+|..+|.++....
T Consensus 335 ~~d~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~A~~~g 388 (452)
T 3e4b_A 335 KVYPQKALDHLLTAARNGQNSADFAIAQLFSQGKGTKPDPLNAYVFSQLAKAQD 388 (452)
T ss_dssp SCCHHHHHHHHHHHHTTTCTTHHHHHHHHHHSCTTBCCCHHHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHHHHhhChHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHCC
Confidence 349999999999998865433322 124567788888877655
No 190
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.82 E-value=5.1e-08 Score=99.76 Aligned_cols=113 Identities=18% Similarity=0.061 Sum_probs=60.0
Q ss_pred CCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHh-----ccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHhc---C
Q 013696 61 YSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQ-----KKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLR---R 132 (438)
Q Consensus 61 ~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~-----g~y~~Ai~~y~~al~~~p~~~~~~~la~~~~~l~---~ 132 (438)
.+++++|+.+|+++.... ++.+ ++.+|.+|... +++++|+.+|.++++..+ +.+++++|.+|...| +
T Consensus 272 ~~d~~~A~~~~~~a~~~~--~~~a--~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~~-~~a~~~lg~~y~~~g~~~~ 346 (490)
T 2xm6_A 272 AKEPLKALEWYRKSAEQG--NSDG--QYYLAHLYDKGAEGVAKNREQAISWYTKSAEQGD-ATAQANLGAIYFRLGSEEE 346 (490)
T ss_dssp SCCHHHHHHHHHHHHTTT--CHHH--HHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHSCCHHH
T ss_pred CCCHHHHHHHHHHHHHcC--CHHH--HHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhCCCccc
Confidence 455566666666655432 3333 44555555554 555555555555555421 445555555555533 5
Q ss_pred HHHHHHHHHHHhhcCCccHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhh
Q 013696 133 FQEAEDDCTEALNLDDRYIKAYSRRATARKE----LGKLKESIEDSEFALRL 180 (438)
Q Consensus 133 ~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~----lg~~~eA~~~~~~al~l 180 (438)
+++|+.+|++++.. .++.+++++|.+|.. .+++++|+.+|++++..
T Consensus 347 ~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~ 396 (490)
T 2xm6_A 347 HKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ 396 (490)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC
Confidence 55555555555554 345555555555555 55555555555555554
No 191
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.81 E-value=1.4e-08 Score=99.43 Aligned_cols=161 Identities=11% Similarity=-0.014 Sum_probs=124.3
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCCh----hHHHHHHHHH
Q 013696 18 DLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTP----DATSEKELGN 92 (438)
Q Consensus 18 ~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~----~a~~~~~~g~ 92 (438)
..+++++++....+.+...+ ... .......+..+|..| ..|++++|+..+.+++.+.+... .+..+..+|.
T Consensus 26 ~~g~~~~A~~~~~~al~~~~-~~~---~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~ 101 (373)
T 1hz4_A 26 NDGNPDEAERLAKLALEELP-PGW---FYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSE 101 (373)
T ss_dssp HTTCHHHHHHHHHHHHHTCC-TTC---HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHcCC-CCc---hhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 34567777777777776442 110 000111223344445 78999999999999998654432 2344678999
Q ss_pred HHHHhccHHHHHHHHHHHhccC--------CC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCc-----cHHHHHHHH
Q 013696 93 ECFKQKKFKEAIDCYSRSIALS--------PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDR-----YIKAYSRRA 158 (438)
Q Consensus 93 ~~~~~g~y~~Ai~~y~~al~~~--------p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~-----~~~a~~~lg 158 (438)
+++..|+|++|+.+|.+++.+. |. ..++.++|.+|...|++++|+..+.+++.+.+. ...++..+|
T Consensus 102 ~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la 181 (373)
T 1hz4_A 102 ILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLI 181 (373)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHH
Confidence 9999999999999999999875 33 667899999999999999999999999988764 357899999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhhCC
Q 013696 159 TARKELGKLKESIEDSEFALRLEP 182 (438)
Q Consensus 159 ~a~~~lg~~~eA~~~~~~al~l~P 182 (438)
.++...|++++|...+++++.+.+
T Consensus 182 ~~~~~~g~~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 182 QCSLARGDLDNARSQLNRLENLLG 205 (373)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999998843
No 192
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.81 E-value=4.9e-08 Score=100.40 Aligned_cols=100 Identities=11% Similarity=0.041 Sum_probs=85.7
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHhccC-----CC----HHHHHHHHHHHHHhcCHHHHHHHHHHHhhc-----CCc---c
Q 013696 88 KELGNECFKQKKFKEAIDCYSRSIALS-----PT----AVAYANRAMAYLKLRRFQEAEDDCTEALNL-----DDR---Y 150 (438)
Q Consensus 88 ~~~g~~~~~~g~y~~Ai~~y~~al~~~-----p~----~~~~~~la~~~~~l~~~~eA~~~~~~al~l-----~p~---~ 150 (438)
...+..+..+|+|++|+..|.+++++. |+ +..+.|+|.+|..+|+|++|+.++++++.+ .|+ -
T Consensus 313 le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 313 LEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 345556778999999999999999863 33 678999999999999999999999999966 344 4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCHHH
Q 013696 151 IKAYSRRATARKELGKLKESIEDSEFALRL-----EPQNQEI 187 (438)
Q Consensus 151 ~~a~~~lg~a~~~lg~~~eA~~~~~~al~l-----~P~~~~~ 187 (438)
...++++|.+|..+|+|++|+..|++|+.+ .|+++..
T Consensus 393 a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 434 (490)
T 3n71_A 393 GMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPIT 434 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHH
Confidence 567999999999999999999999999976 4777765
No 193
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.79 E-value=3.6e-08 Score=110.21 Aligned_cols=140 Identities=8% Similarity=0.084 Sum_probs=84.5
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhhcCCCCCccccccccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHH
Q 013696 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKEL 90 (438)
Q Consensus 12 l~~~~~~l~~we~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~ 90 (438)
+.-++..+++|+++++...+. .....+..+|.++ ..|++++|+..|.++ +++.+ +...
T Consensus 1082 ~~VLie~i~nldrAiE~Aerv--------------n~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~sa--y~eV 1140 (1630)
T 1xi4_A 1082 VQVLIEHIGNLDRAYEFAERC--------------NEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSS--YMEV 1140 (1630)
T ss_pred HHHHHHHHhhHHHHHHHHHhc--------------CCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHH--HHHH
Confidence 344555666666665544321 1122445666666 777788888887665 44455 5577
Q ss_pred HHHHHHhccHHHHHHHHHHHhccCCC----------------------------HHHHHHHHHHHHHhcCHHHHHHHHHH
Q 013696 91 GNECFKQKKFKEAIDCYSRSIALSPT----------------------------AVAYANRAMAYLKLRRFQEAEDDCTE 142 (438)
Q Consensus 91 g~~~~~~g~y~~Ai~~y~~al~~~p~----------------------------~~~~~~la~~~~~l~~~~eA~~~~~~ 142 (438)
|.++.+.|+|++|+++|..+++..+. ...|.++|.++...|+|++|..+|.+
T Consensus 1141 a~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~k 1220 (1630)
T 1xi4_A 1141 VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNN 1220 (1630)
T ss_pred HHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHh
Confidence 77777777777777777666644421 12344566666666666666666666
Q ss_pred HhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 013696 143 ALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRL 180 (438)
Q Consensus 143 al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l 180 (438)
| ..|.++|.+|.++|+|++|++.+++|...
T Consensus 1221 A--------~ny~rLA~tLvkLge~q~AIEaarKA~n~ 1250 (1630)
T 1xi4_A 1221 V--------SNFGRLASTLVHLGEYQAAVDGARKANST 1250 (1630)
T ss_pred h--------hHHHHHHHHHHHhCCHHHHHHHHHHhCCH
Confidence 4 35666666666666666666666665433
No 194
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.78 E-value=5.4e-08 Score=99.59 Aligned_cols=136 Identities=17% Similarity=0.027 Sum_probs=111.3
Q ss_pred CCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHH----hccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHh-----c
Q 013696 61 YSRNYDPVSHISSSLMNEESTPDATSEKELGNECFK----QKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKL-----R 131 (438)
Q Consensus 61 ~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~----~g~y~~Ai~~y~~al~~~p~~~~~~~la~~~~~l-----~ 131 (438)
.+++++|+.+|++++... +..+ ++.+|.+|.. .+++++|+.+|+++++.. .+.+++++|.+|... +
T Consensus 236 ~~~~~~A~~~~~~a~~~~--~~~a--~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~~-~~~a~~~Lg~~y~~~~~g~~~ 310 (490)
T 2xm6_A 236 TQDYTQSRVLFSQSAEQG--NSIA--QFRLGYILEQGLAGAKEPLKALEWYRKSAEQG-NSDGQYYLAHLYDKGAEGVAK 310 (490)
T ss_dssp CCCHHHHHHHHHHHHTTT--CHHH--HHHHHHHHHHTTTSSCCHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHCBTTBCC
T ss_pred CCCHHHHHHHHHHHHHCC--CHHH--HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHcCCCCCcC
Confidence 788999999999998764 4455 6689999998 899999999999998762 378889999999988 8
Q ss_pred CHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhCCCCHHHH--------------HHHHHH
Q 013696 132 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELG---KLKESIEDSEFALRLEPQNQEIK--------------KQLAEV 194 (438)
Q Consensus 132 ~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg---~~~eA~~~~~~al~l~P~~~~~~--------------~~l~~a 194 (438)
++++|+.+|++++.. .++.+++++|.+|...| ++++|+.+|++++.. +++.++ .++.+|
T Consensus 311 ~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A 386 (490)
T 2xm6_A 311 NREQAISWYTKSAEQ--GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQA 386 (490)
T ss_dssp CHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHH
T ss_pred CHHHHHHHHHHHHhc--CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHH
Confidence 999999999999886 46788999999998877 889999999999987 344441 356678
Q ss_pred HHHHHHHHhhc
Q 013696 195 KSLYEKEVFQK 205 (438)
Q Consensus 195 ~~~~~ka~~~~ 205 (438)
..+|.+++...
T Consensus 387 ~~~~~~A~~~~ 397 (490)
T 2xm6_A 387 AIWMRKAAEQG 397 (490)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhCC
Confidence 88888887764
No 195
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.78 E-value=7.2e-08 Score=82.67 Aligned_cols=91 Identities=13% Similarity=0.051 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhc---CHHHHHHHHHHHhhcC-C-ccHHHHHHHHHHHHHcCCHHHHHHH
Q 013696 100 FKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR---RFQEAEDDCTEALNLD-D-RYIKAYSRRATARKELGKLKESIED 173 (438)
Q Consensus 100 y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~---~~~eA~~~~~~al~l~-p-~~~~a~~~lg~a~~~lg~~~eA~~~ 173 (438)
...+...|.+.+..++. ..+.+++|.|+.+.+ ++++++..++.++..+ | +..+++|++|.+++++|+|++|+.+
T Consensus 14 l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y 93 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKY 93 (152)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHH
Confidence 45667778888777766 999999999999988 7779999999999998 7 6789999999999999999999999
Q ss_pred HHHHHhhCCCCHHHHHH
Q 013696 174 SEFALRLEPQNQEIKKQ 190 (438)
Q Consensus 174 ~~~al~l~P~~~~~~~~ 190 (438)
++++|+++|+|.++..-
T Consensus 94 ~~~lL~ieP~n~QA~~L 110 (152)
T 1pc2_A 94 VRGLLQTEPQNNQAKEL 110 (152)
T ss_dssp HHHHHHHCTTCHHHHHH
T ss_pred HHHHHhcCCCCHHHHHH
Confidence 99999999999888543
No 196
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.74 E-value=6.6e-08 Score=94.83 Aligned_cols=122 Identities=11% Similarity=0.074 Sum_probs=94.0
Q ss_pred CCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccH-------HHHHH-HHH--HHhccCCC-HHHHHHHHHHHHHh
Q 013696 62 SRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKF-------KEAID-CYS--RSIALSPT-AVAYANRAMAYLKL 130 (438)
Q Consensus 62 g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y-------~~Ai~-~y~--~al~~~p~-~~~~~~la~~~~~l 130 (438)
.++.+|+.+|+++++++|++..+++ .++.+|+....+ ..++. .+. .++..+|. +.+|..+|.+++..
T Consensus 213 ~~~~~A~~l~e~Al~lDP~~a~A~A--~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~~ 290 (372)
T 3ly7_A 213 KSLNRASELLGEIVQSSPEFTYARA--EKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVK 290 (372)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHH--HHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHH--HHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHhC
Confidence 4468899999999999999988866 566665432111 11111 122 22344566 88888899889889
Q ss_pred cCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Q 013696 131 RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQE 186 (438)
Q Consensus 131 ~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~ 186 (438)
|++++|+..+++|+.++|+ ..+|..+|.++...|++++|++.|.+|++++|..+.
T Consensus 291 gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 291 GKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp TCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred CCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 9999999999999999974 678889999999999999999999999999998753
No 197
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.74 E-value=1.2e-08 Score=101.86 Aligned_cols=164 Identities=8% Similarity=-0.021 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcccccc--------ccccCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhH----H
Q 013696 19 LQDWDLSLNEKDKKMKHKASSKDNLVSSS--------LKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDA----T 85 (438)
Q Consensus 19 l~~we~~i~~~~~~l~~~~~~~~~~~~~~--------~~~~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a----~ 85 (438)
-++|+++++.+...+...+.......... ....+..+|..| ..|++++|+++|.+++...+....+ .
T Consensus 17 ~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 96 (434)
T 4b4t_Q 17 EKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKV 96 (434)
T ss_dssp HTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 36788888888888776652222111100 011234466667 8899999999999999866554432 3
Q ss_pred HHHHHHHHHHHhccHHHHHHHHHHHhccCC------C-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhc------CCccHH
Q 013696 86 SEKELGNECFKQKKFKEAIDCYSRSIALSP------T-AVAYANRAMAYLKLRRFQEAEDDCTEALNL------DDRYIK 152 (438)
Q Consensus 86 ~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p------~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l------~p~~~~ 152 (438)
....+|.++...|+++.|+.+|.+++...+ . +.++.++|.+|...|+|.+|+..+.+++.. .+....
T Consensus 97 ~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~ 176 (434)
T 4b4t_Q 97 LKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVD 176 (434)
T ss_dssp HHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHH
Confidence 355778888889999999999999998642 2 788999999999999999999999999865 344578
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 013696 153 AYSRRATARKELGKLKESIEDSEFALRLEP 182 (438)
Q Consensus 153 a~~~lg~a~~~lg~~~eA~~~~~~al~l~P 182 (438)
++..+|.+|..+|+|++|...|++++.+.+
T Consensus 177 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 177 VHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 899999999999999999999999998753
No 198
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.72 E-value=2.3e-08 Score=99.75 Aligned_cols=146 Identities=14% Similarity=0.010 Sum_probs=117.7
Q ss_pred cCCCccchHHHHHhhhcCCCCChh---------------HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-------H
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPD---------------ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------A 117 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~---------------a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-------~ 117 (438)
..|+|++|+..|.+++...|.... ..++..+|..|+..|+|++|+++|.+++...+. .
T Consensus 16 ~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 95 (434)
T 4b4t_Q 16 NEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVK 95 (434)
T ss_dssp HHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHH
T ss_pred HCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHH
Confidence 668999999999999998876533 123679999999999999999999999987654 3
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhcCC------ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------H
Q 013696 118 VAYANRAMAYLKLRRFQEAEDDCTEALNLDD------RYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN------Q 185 (438)
Q Consensus 118 ~~~~~la~~~~~l~~~~eA~~~~~~al~l~p------~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~------~ 185 (438)
.++.++|.++...|+++.|+..+..++.+.+ ....++.++|.+|...|+|.+|+..+.+++...... .
T Consensus 96 ~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~ 175 (434)
T 4b4t_Q 96 VLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLV 175 (434)
T ss_dssp HHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHH
Confidence 5677889999999999999999999987643 347789999999999999999999999998763221 1
Q ss_pred HH----------HHHHHHHHHHHHHHHhhc
Q 013696 186 EI----------KKQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 186 ~~----------~~~l~~a~~~~~ka~~~~ 205 (438)
++ .+++.+|...|.+++...
T Consensus 176 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 176 DVHLLESKVYHKLRNLAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 11 456677777777776544
No 199
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.67 E-value=1.3e-07 Score=74.55 Aligned_cols=72 Identities=21% Similarity=0.114 Sum_probs=65.4
Q ss_pred CCC-HHHHHHHHHHHHHhcC---HHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 013696 114 SPT-AVAYANRAMAYLKLRR---FQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQ 185 (438)
Q Consensus 114 ~p~-~~~~~~la~~~~~l~~---~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~ 185 (438)
+|+ +.++..+|.+++..++ ..+|...+++++.++|+++.+++.+|.+++..|+|++|+.+|++++..+|.++
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 455 8889999999987666 79999999999999999999999999999999999999999999999999853
No 200
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.62 E-value=2.6e-07 Score=88.95 Aligned_cols=136 Identities=10% Similarity=-0.007 Sum_probs=89.1
Q ss_pred hHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCC--C-HHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 013696 67 PVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP--T-AVAYANRAMAYLKLRRFQEAEDDCTEA 143 (438)
Q Consensus 67 Ai~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p--~-~~~~~~la~~~~~l~~~~eA~~~~~~a 143 (438)
|+..+++.+...+....+ +..+|.++...|++++|+..+.++|..+| . ..++..++.+|+++|+.+.|.+.+++.
T Consensus 85 a~~~l~~l~~~~~~~~~~--~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~ 162 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYE--LYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNY 162 (310)
T ss_dssp CCHHHHHTTTTSCCCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcHH--HHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 677777777655444444 44777777778888888888887777776 4 677777777888888888888888777
Q ss_pred hhcCCc------cHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCC--CHHH-------HHHHHHHHHHHHHHHhh
Q 013696 144 LNLDDR------YIKAYSRRATARKELG--KLKESIEDSEFALRLEPQ--NQEI-------KKQLAEVKSLYEKEVFQ 204 (438)
Q Consensus 144 l~l~p~------~~~a~~~lg~a~~~lg--~~~eA~~~~~~al~l~P~--~~~~-------~~~l~~a~~~~~ka~~~ 204 (438)
.+.+|+ ..-.+..-|++....| ++++|...|+++....|+ .... .+++.+|...++..+.+
T Consensus 163 ~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln~~~~~g~~~eAe~~L~~l~~~ 240 (310)
T 3mv2_B 163 TNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLNLHLQQRNIAEAQGIVELLLSD 240 (310)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHHHHHHHTCHHHHHHHHHHHHSH
T ss_pred HhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 777772 2223333344455555 777777777777776665 1111 45566666666644443
No 201
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.62 E-value=4.9e-07 Score=72.50 Aligned_cols=73 Identities=15% Similarity=0.099 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhc-------CCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 013696 120 YANRAMAYLKLRRFQEAEDDCTEALNL-------DDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLA 192 (438)
Q Consensus 120 ~~~la~~~~~l~~~~eA~~~~~~al~l-------~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~ 192 (438)
++.+|..++..++|..|+.+|+.|+.. .+..+.++..+|.++.++|+++.|+..++++++++|++..+..++.
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 344455555555555555555555543 2334566666777777777777777777777777777666655544
No 202
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.57 E-value=5.2e-07 Score=72.35 Aligned_cols=75 Identities=12% Similarity=0.047 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHhccC-------CC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHH
Q 013696 85 TSEKELGNECFKQKKFKEAIDCYSRSIALS-------PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSR 156 (438)
Q Consensus 85 ~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~-------p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~ 156 (438)
..++.+|..++..|+|..|+..|..|+... +. +.++.++|.||.++|+++.|+..+++++.++|++..+..+
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n 85 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGN 85 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhh
Confidence 347799999999999999999999999963 22 7889999999999999999999999999999999999888
Q ss_pred HHH
Q 013696 157 RAT 159 (438)
Q Consensus 157 lg~ 159 (438)
++.
T Consensus 86 ~~~ 88 (104)
T 2v5f_A 86 LKY 88 (104)
T ss_dssp HHH
T ss_pred HHH
Confidence 873
No 203
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.57 E-value=5.1e-07 Score=88.53 Aligned_cols=136 Identities=14% Similarity=0.073 Sum_probs=106.7
Q ss_pred hcCCCCChhHHHHHHHHHHHHHhc---cHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHH-------HHHH-HHH-
Q 013696 75 LMNEESTPDATSEKELGNECFKQK---KFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQ-------EAED-DCT- 141 (438)
Q Consensus 75 l~~~p~~~~a~~~~~~g~~~~~~g---~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~-------eA~~-~~~- 141 (438)
...-|.+..++.++..|..++..+ .+.+|+.+|+++++++|+ +.+|..++.||.....+. .++. .+.
T Consensus 187 ~~~~p~~~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a 266 (372)
T 3ly7_A 187 QKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDN 266 (372)
T ss_dssp HHHSCSSGGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred hccCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHH
Confidence 344677888888999999988764 468999999999999999 899999998886432211 1111 122
Q ss_pred -HHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH---------HHHHHHHHHHHHHHHHhhchhhhh
Q 013696 142 -EALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQE---------IKKQLAEVKSLYEKEVFQKASKTL 210 (438)
Q Consensus 142 -~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~---------~~~~l~~a~~~~~ka~~~~~~~~~ 210 (438)
.++..+|.++.+|..+|.++...|++++|+..+++|+.++|+... ..|+.++|...|.+|+.+++..+.
T Consensus 267 ~~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 267 IVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp HHTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred HHhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 234677999999999999999999999999999999999986432 156788999999999999877653
No 204
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.57 E-value=7.6e-07 Score=90.04 Aligned_cols=100 Identities=11% Similarity=0.054 Sum_probs=84.9
Q ss_pred HHHHHHHHhccHHHHHHHHHHHhccC-----CC----HHHHHHHHHHHHHhcCHHHHHHHHHHHhhc-----CCc---cH
Q 013696 89 ELGNECFKQKKFKEAIDCYSRSIALS-----PT----AVAYANRAMAYLKLRRFQEAEDDCTEALNL-----DDR---YI 151 (438)
Q Consensus 89 ~~g~~~~~~g~y~~Ai~~y~~al~~~-----p~----~~~~~~la~~~~~l~~~~eA~~~~~~al~l-----~p~---~~ 151 (438)
.....+..+|+|++|+..|++++++. |+ ..++.++|.+|..+|+|++|+.++.+++.+ .|+ -.
T Consensus 292 ~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a 371 (429)
T 3qwp_A 292 KKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRG 371 (429)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHH
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHH
Confidence 34455778999999999999999863 33 678999999999999999999999999965 344 45
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCHHHH
Q 013696 152 KAYSRRATARKELGKLKESIEDSEFALRL-----EPQNQEIK 188 (438)
Q Consensus 152 ~a~~~lg~a~~~lg~~~eA~~~~~~al~l-----~P~~~~~~ 188 (438)
..++++|.+|..+|+|++|+..|++|+.+ .|+++...
T Consensus 372 ~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 413 (429)
T 3qwp_A 372 VQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIE 413 (429)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHH
Confidence 67999999999999999999999999976 47777664
No 205
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.55 E-value=4.6e-07 Score=91.67 Aligned_cols=95 Identities=8% Similarity=-0.036 Sum_probs=80.9
Q ss_pred HHHhccHHHHHHHHHHHhccC-----CC----HHHHHHHHHHHHHhcCHHHHHHHHHHHhhc-----CCc---cHHHHHH
Q 013696 94 CFKQKKFKEAIDCYSRSIALS-----PT----AVAYANRAMAYLKLRRFQEAEDDCTEALNL-----DDR---YIKAYSR 156 (438)
Q Consensus 94 ~~~~g~y~~Ai~~y~~al~~~-----p~----~~~~~~la~~~~~l~~~~eA~~~~~~al~l-----~p~---~~~a~~~ 156 (438)
....|+|++|+..|.+++++. |+ +..+.|+|.+|..+|+|++|+.+|++++.+ .|+ -...+++
T Consensus 308 ~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~n 387 (433)
T 3qww_A 308 AKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLK 387 (433)
T ss_dssp HTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHH
T ss_pred hhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 344688999999999999862 33 678999999999999999999999999965 344 4567999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhh-----CCCCHHHH
Q 013696 157 RATARKELGKLKESIEDSEFALRL-----EPQNQEIK 188 (438)
Q Consensus 157 lg~a~~~lg~~~eA~~~~~~al~l-----~P~~~~~~ 188 (438)
+|.+|..+|+|++|+..|++|+.+ .|+++...
T Consensus 388 La~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 424 (433)
T 3qww_A 388 LGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYIS 424 (433)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHH
T ss_pred HHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHH
Confidence 999999999999999999999976 47777653
No 206
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.54 E-value=2.2e-08 Score=100.72 Aligned_cols=131 Identities=13% Similarity=0.078 Sum_probs=92.1
Q ss_pred cCCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCCHHHHHHHHHHHHH
Q 013696 51 AKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLK 129 (438)
Q Consensus 51 ~~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~~~~~~~la~~~~~ 129 (438)
.+..+|..| ..|+|++|+.+|.++ .. |..+|.++++.|+|++|+++|.++ .++.+|...+.++..
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n--~~~LA~~L~~Lg~yq~AVea~~KA----~~~~~Wk~v~~aCv~ 189 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV--------SN--FGRLASTLVHLGEYQAAVDGARKA----NSTRTWKEVCFACVD 189 (449)
T ss_dssp -------------CTTTHHHHHHHT--------TC--HHHHHHHHHTTTCHHHHHHHHHHH----TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh--------hh--HHHHHHHHHHhccHHHHHHHHHHc----CCchhHHHHHHHHHH
Confidence 556677766 788888888888866 12 557888888888888888888888 246778888888888
Q ss_pred hcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 013696 130 LRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 199 (438)
Q Consensus 130 l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 199 (438)
.|+|+.|..+... |...|++ ...+...|...|++++|+..++.+|.+++.+..+...+.-+...|.
T Consensus 190 ~~ef~lA~~~~l~-L~~~ad~---l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~ 255 (449)
T 1b89_A 190 GKEFRLAQMCGLH-IVVHADE---LEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFK 255 (449)
T ss_dssp TTCHHHHHHTTTT-TTTCHHH---HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTC
T ss_pred cCcHHHHHHHHHH-HHhCHhh---HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcC
Confidence 8888888665554 3355544 4467788999999999999999999999999888887766666554
No 207
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.53 E-value=5.2e-07 Score=77.28 Aligned_cols=98 Identities=9% Similarity=0.009 Sum_probs=84.9
Q ss_pred CCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhc---cHHHHHHHHHHHhccC-C-C-HHHHHHHHHHHHHhcCHHH
Q 013696 62 SRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQK---KFKEAIDCYSRSIALS-P-T-AVAYANRAMAYLKLRRFQE 135 (438)
Q Consensus 62 g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g---~y~~Ai~~y~~al~~~-p-~-~~~~~~la~~~~~l~~~~e 135 (438)
+....+...|.+.+..++.+.++ .+++|+++.+.+ ++.+++..++..++.+ | . ..++|++|..|+++++|++
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~--~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~ 89 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKST--QFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHH--HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHHccCCCcHHH--HHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHH
Confidence 34566778888888877776777 679999999988 7889999999999999 8 3 8999999999999999999
Q ss_pred HHHHHHHHhhcCCccHHHHHHHHHHH
Q 013696 136 AEDDCTEALNLDDRYIKAYSRRATAR 161 (438)
Q Consensus 136 A~~~~~~al~l~p~~~~a~~~lg~a~ 161 (438)
|..+++++++++|++..+...+..+-
T Consensus 90 A~~y~~~lL~ieP~n~QA~~Lk~~ie 115 (152)
T 1pc2_A 90 ALKYVRGLLQTEPQNNQAKELERLID 115 (152)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 99999999999999998876655443
No 208
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.51 E-value=7.9e-07 Score=89.41 Aligned_cols=134 Identities=13% Similarity=0.166 Sum_probs=89.1
Q ss_pred CCCCCCcC-cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHh
Q 013696 52 KKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKL 130 (438)
Q Consensus 52 ~~~~~~~y-~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~~~~~~~la~~~~~l 130 (438)
...++.+| +.|++.++...+.. |+. . .|..+|..|+..|.|++|+.+|.++ ..|..+|.|+.++
T Consensus 97 ~~~Li~~Y~Klg~l~e~e~f~~~-----pn~-~--a~~~IGd~~~~~g~yeeA~~~Y~~a-------~n~~~LA~~L~~L 161 (449)
T 1b89_A 97 ETELIFALAKTNRLAELEEFING-----PNN-A--HIQQVGDRCYDEKMYDAAKLLYNNV-------SNFGRLASTLVHL 161 (449)
T ss_dssp ------------CHHHHTTTTTC-----C-------------------CTTTHHHHHHHT-------TCHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCHHHHHHHHcC-----CcH-H--HHHHHHHHHHHcCCHHHHHHHHHHh-------hhHHHHHHHHHHh
Confidence 34566677 88999988877743 332 3 4889999999999999999999976 4789999999999
Q ss_pred cCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH-------HHHHHHHHHHHHHHHh
Q 013696 131 RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI-------KKQLAEVKSLYEKEVF 203 (438)
Q Consensus 131 ~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~-------~~~l~~a~~~~~ka~~ 203 (438)
|+|++|++.+.++ .++.+|...+.++...|+++.|..+... +.++|++... .+.+.+|..++++++.
T Consensus 162 g~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~ 235 (449)
T 1b89_A 162 GEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADELEELINYYQDRGYFEELITMLEAALG 235 (449)
T ss_dssp TCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhC
Confidence 9999999999999 4799999999999999999999887765 4466655332 3567788888888877
Q ss_pred hch
Q 013696 204 QKA 206 (438)
Q Consensus 204 ~~~ 206 (438)
+..
T Consensus 236 le~ 238 (449)
T 1b89_A 236 LER 238 (449)
T ss_dssp STT
T ss_pred CcH
Confidence 763
No 209
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.49 E-value=2e-06 Score=82.70 Aligned_cols=119 Identities=8% Similarity=-0.104 Sum_probs=75.6
Q ss_pred cCCCccchHHHHHhhhcCCC--CChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCC-----CHHHHHHHH--HHHHHh
Q 013696 60 SYSRNYDPVSHISSSLMNEE--STPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP-----TAVAYANRA--MAYLKL 130 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p--~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p-----~~~~~~~la--~~~~~l 130 (438)
..|++++|+..+.+.+..+| ...++ +...+.++.++|+.+.|.+.+.++.+.+| +-.+..+++ .+.+..
T Consensus 112 ~~g~~eeAL~~l~~~i~~~~~~~~lea--~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~ 189 (310)
T 3mv2_B 112 ILGDLDKSLETCVEGIDNDEAEGTTEL--LLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFAT 189 (310)
T ss_dssp HHTCHHHHHHHHHHHHTSSCSTTHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHhccCCCcCcHHH--HHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHh
Confidence 55777777777777776665 44444 44667777777777777777777777777 223333333 335545
Q ss_pred c--CHHHHHHHHHHHhhcCCc--cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 013696 131 R--RFQEAEDDCTEALNLDDR--YIKAYSRRATARKELGKLKESIEDSEFALRLEPQ 183 (438)
Q Consensus 131 ~--~~~eA~~~~~~al~l~p~--~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~ 183 (438)
| ++.+|...|+++....|+ ....+++ ++..+|++++|...++.++++.|+
T Consensus 190 g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~ 243 (310)
T 3mv2_B 190 NKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYS 243 (310)
T ss_dssp TCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHH
T ss_pred CCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhccc
Confidence 5 777777777777666665 2223333 677777777777777766666665
No 210
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.45 E-value=8.8e-07 Score=99.23 Aligned_cols=130 Identities=10% Similarity=-0.019 Sum_probs=100.7
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHhcCHHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDD 139 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~~~~~~~la~~~~~l~~~~eA~~~ 139 (438)
..+++++|++++.++ +.+.+ |+.+|.++...|+|++|+.+|.++ .++..|.+.|.++.++|+|++|+++
T Consensus 1088 ~i~nldrAiE~Aerv-----n~p~v--WsqLAKAql~~G~~kEAIdsYiKA----dD~say~eVa~~~~~lGkyEEAIey 1156 (1630)
T 1xi4_A 1088 HIGNLDRAYEFAERC-----NEPAV--WSQLAKAQLQKGMVKEAIDSYIKA----DDPSSYMEVVQAANTSGNWEELVKY 1156 (1630)
T ss_pred HHhhHHHHHHHHHhc-----CCHHH--HHHHHHHHHhCCCHHHHHHHHHhc----CChHHHHHHHHHHHHcCCHHHHHHH
Confidence 556777777777765 33555 779999999999999999999876 3388999999999999999999999
Q ss_pred HHHHhhcCCc---------------------------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH-----
Q 013696 140 CTEALNLDDR---------------------------YIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----- 187 (438)
Q Consensus 140 ~~~al~l~p~---------------------------~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~----- 187 (438)
+..|+...+. +...|.++|..+...|+|++|+.+|.++- ....+
T Consensus 1157 L~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA~----ny~rLA~tLv 1232 (1630)
T 1xi4_A 1157 LQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVS----NFGRLASTLV 1232 (1630)
T ss_pred HHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhhh----HHHHHHHHHH
Confidence 9988866532 23457788999999999999999998872 11111
Q ss_pred -HHHHHHHHHHHHHHHhh
Q 013696 188 -KKQLAEVKSLYEKEVFQ 204 (438)
Q Consensus 188 -~~~l~~a~~~~~ka~~~ 204 (438)
.+++..|.+.++++...
T Consensus 1233 kLge~q~AIEaarKA~n~ 1250 (1630)
T 1xi4_A 1233 HLGEYQAAVDGARKANST 1250 (1630)
T ss_pred HhCCHHHHHHHHHHhCCH
Confidence 45677777777776443
No 211
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.42 E-value=4.9e-07 Score=91.47 Aligned_cols=94 Identities=13% Similarity=0.080 Sum_probs=79.6
Q ss_pred cCCCccchHHHHHhhhc-----CCCCChh-HHHHHHHHHHHHHhccHHHHHHHHHHHhccC-----C---C-HHHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLM-----NEESTPD-ATSEKELGNECFKQKKFKEAIDCYSRSIALS-----P---T-AVAYANRA 124 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~-----~~p~~~~-a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~-----p---~-~~~~~~la 124 (438)
..|+|++|+..|+++|. +.|+++. +..+.++|.+|..+|+|++|+.+|.+++.+. | + +..++|+|
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 45789999999999998 3455554 5568899999999999999999999999872 3 3 78899999
Q ss_pred HHHHHhcCHHHHHHHHHHHhhc-----CCccHHH
Q 013696 125 MAYLKLRRFQEAEDDCTEALNL-----DDRYIKA 153 (438)
Q Consensus 125 ~~~~~l~~~~eA~~~~~~al~l-----~p~~~~a 153 (438)
.+|..+|+|++|+..|++|+.+ .|+++..
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 423 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYI 423 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHH
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 9999999999999999999975 5666543
No 212
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.39 E-value=7.7e-07 Score=90.00 Aligned_cols=105 Identities=9% Similarity=0.008 Sum_probs=85.8
Q ss_pred cCCCccchHHHHHhhhcC-----CCCChh-HHHHHHHHHHHHHhccHHHHHHHHHHHhccC-----CC----HHHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMN-----EESTPD-ATSEKELGNECFKQKKFKEAIDCYSRSIALS-----PT----AVAYANRA 124 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~-----~p~~~~-a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~-----p~----~~~~~~la 124 (438)
.+|+|++|+..|++++.+ .|+++. +..+.++|.+|..+|+|++|+.+|.+++.+. |+ +..++|+|
T Consensus 299 ~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa 378 (429)
T 3qwp_A 299 AHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVG 378 (429)
T ss_dssp HTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHH
Confidence 678899999999999975 344443 5568899999999999999999999999863 33 77899999
Q ss_pred HHHHHhcCHHHHHHHHHHHhhc-----CCccH---HHHHHHHHHHHHc
Q 013696 125 MAYLKLRRFQEAEDDCTEALNL-----DDRYI---KAYSRRATARKEL 164 (438)
Q Consensus 125 ~~~~~l~~~~eA~~~~~~al~l-----~p~~~---~a~~~lg~a~~~l 164 (438)
.+|..+|+|++|+..+.+|+.+ .|+++ ..+.+++.++..+
T Consensus 379 ~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 379 KLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999965 46654 4456677666543
No 213
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.36 E-value=6.2e-06 Score=77.94 Aligned_cols=108 Identities=13% Similarity=0.014 Sum_probs=90.9
Q ss_pred CCCCChhHHHHHHHHHHHH-Hh--c------cHHHHHHHHHHHhccCCC---HHHHHHHHHHHHHh-----cCHHHHHHH
Q 013696 77 NEESTPDATSEKELGNECF-KQ--K------KFKEAIDCYSRSIALSPT---AVAYANRAMAYLKL-----RRFQEAEDD 139 (438)
Q Consensus 77 ~~p~~~~a~~~~~~g~~~~-~~--g------~y~~Ai~~y~~al~~~p~---~~~~~~la~~~~~l-----~~~~eA~~~ 139 (438)
.+|++.++..|...++.-+ .. | ....|...++++++++|+ ..+|..+|..|... |+.+.|..+
T Consensus 147 ~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ 226 (301)
T 3u64_A 147 CTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTA 226 (301)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHH
T ss_pred cCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHH
Confidence 5667777755555554332 21 2 467899999999999999 77999999999995 999999999
Q ss_pred HHHHhhcCCcc-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCC
Q 013696 140 CTEALNLDDRY-IKAYSRRATARKE-LGKLKESIEDSEFALRLEPQN 184 (438)
Q Consensus 140 ~~~al~l~p~~-~~a~~~lg~a~~~-lg~~~eA~~~~~~al~l~P~~ 184 (438)
|++|+.++|+. ..+++..|..+.. .|++++|...+++++...|..
T Consensus 227 ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 227 FEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 99999999975 9999999999988 599999999999999998763
No 214
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.25 E-value=2.1e-05 Score=64.98 Aligned_cols=97 Identities=13% Similarity=0.031 Sum_probs=80.7
Q ss_pred HhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHH---HHHHHHHHhhcC-C-ccHHHHHHHHHHHHHcCCHHH
Q 013696 96 KQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQE---AEDDCTEALNLD-D-RYIKAYSRRATARKELGKLKE 169 (438)
Q Consensus 96 ~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~e---A~~~~~~al~l~-p-~~~~a~~~lg~a~~~lg~~~e 169 (438)
.......+...|.+.+..++. ..+.+++|.++.+.++... ++..++..+..+ | ..-.++|.+|.+++++|+|.+
T Consensus 13 ~~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~ 92 (126)
T 1nzn_A 13 SVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEK 92 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHH
Confidence 344456667777777776654 9999999999999887666 999999999887 5 567899999999999999999
Q ss_pred HHHHHHHHHhhCCCCHHHHHHHH
Q 013696 170 SIEDSEFALRLEPQNQEIKKQLA 192 (438)
Q Consensus 170 A~~~~~~al~l~P~~~~~~~~l~ 192 (438)
|+.+++.+|+++|+|.++..-..
T Consensus 93 A~~~~~~lL~~eP~n~QA~~Lk~ 115 (126)
T 1nzn_A 93 ALKYVRGLLQTEPQNNQAKELER 115 (126)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHH
Confidence 99999999999999998854433
No 215
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.25 E-value=6.3e-06 Score=69.41 Aligned_cols=101 Identities=16% Similarity=0.080 Sum_probs=84.3
Q ss_pred hccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHH----cCCHHHHH
Q 013696 97 QKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKE----LGKLKESI 171 (438)
Q Consensus 97 ~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~----lg~~~eA~ 171 (438)
.+++++|+.+|.++.+.... +. +|.+|...+.+++|+.+|+++... .++.+++++|.+|.. .+++++|+
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~~a~----lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEMFGC----LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTHH----HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCHhhh----HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 46799999999999998743 33 999999999999999999999987 689999999999999 89999999
Q ss_pred HHHHHHHhhCCCCHHHH--------------HHHHHHHHHHHHHHhhc
Q 013696 172 EDSEFALRLEPQNQEIK--------------KQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 172 ~~~~~al~l~P~~~~~~--------------~~l~~a~~~~~ka~~~~ 205 (438)
.+|+++... +++.+. .++.+|..+|.++....
T Consensus 82 ~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 82 QYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC
Confidence 999999987 455552 34566666777766554
No 216
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.25 E-value=4.6e-06 Score=65.55 Aligned_cols=71 Identities=21% Similarity=0.135 Sum_probs=64.1
Q ss_pred CCCChhHHHHHHHHHHHHHhcc---HHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcc
Q 013696 78 EESTPDATSEKELGNECFKQKK---FKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY 150 (438)
Q Consensus 78 ~p~~~~a~~~~~~g~~~~~~g~---y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~ 150 (438)
+|+++.. +..+|.+++..++ .++|..++.++++++|+ ..+++.+|..++..|+|++|+..+++++..+|.+
T Consensus 2 ~p~~~~~--~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQ--LAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHH--HHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHH--HHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 4677777 6699999976666 79999999999999999 9999999999999999999999999999999884
No 217
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.91 E-value=6.3e-05 Score=62.08 Aligned_cols=95 Identities=8% Similarity=-0.009 Sum_probs=78.9
Q ss_pred cchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHH---HHHHHHHHhccC-CC--HHHHHHHHHHHHHhcCHHHHHH
Q 013696 65 YDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKE---AIDCYSRSIALS-PT--AVAYANRAMAYLKLRRFQEAED 138 (438)
Q Consensus 65 ~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~---Ai~~y~~al~~~-p~--~~~~~~la~~~~~l~~~~eA~~ 138 (438)
..+...|.+.+..++....+ .+++|+++.+..+..+ +|..+...+..+ |. -.+++.+|..++++|+|..|..
T Consensus 18 ~~~~~~y~~e~~~~~~s~~~--~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~ 95 (126)
T 1nzn_A 18 LKFEKKFQSEKAAGSVSKST--QFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALK 95 (126)
T ss_dssp HHHHHHHHHHHHHSCCCHHH--HHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHhccCCCcHHH--HHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHH
Confidence 34556677777766655666 6699999999887666 999999999987 63 7889999999999999999999
Q ss_pred HHHHHhhcCCccHHHHHHHHHHH
Q 013696 139 DCTEALNLDDRYIKAYSRRATAR 161 (438)
Q Consensus 139 ~~~~al~l~p~~~~a~~~lg~a~ 161 (438)
+++.+|+++|+|..|......+-
T Consensus 96 ~~~~lL~~eP~n~QA~~Lk~~i~ 118 (126)
T 1nzn_A 96 YVRGLLQTEPQNNQAKELERLID 118 (126)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHH
Confidence 99999999999998876665543
No 218
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.85 E-value=0.00013 Score=77.86 Aligned_cols=113 Identities=13% Similarity=-0.005 Sum_probs=74.6
Q ss_pred chHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHH-HHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 013696 66 DPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAI-DCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEA 143 (438)
Q Consensus 66 eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai-~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~a 143 (438)
.....|+++|...|..+.. |...+..+...|+.++|+ ..|.+|+...|. ..+|...+......|+++.|...|+++
T Consensus 327 Rv~~~Ye~aL~~~p~~~~l--W~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~ 404 (679)
T 4e6h_A 327 RMTYVYMQAAQHVCFAPEI--WFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSC 404 (679)
T ss_dssp HHHHHHHHHHHHTTTCHHH--HHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHH--HHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 3456677777777776666 556677777777777776 777777777776 666667777777777777777777777
Q ss_pred hhcC-----------Cc-----------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 013696 144 LNLD-----------DR-----------YIKAYSRRATARKELGKLKESIEDSEFALRL 180 (438)
Q Consensus 144 l~l~-----------p~-----------~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l 180 (438)
+..- |. ...+|...+......|..+.|...|.+|+..
T Consensus 405 l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~ 463 (679)
T 4e6h_A 405 IDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL 463 (679)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 6531 31 3345666666666666666666666666655
No 219
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.77 E-value=0.00047 Score=57.12 Aligned_cols=76 Identities=12% Similarity=0.014 Sum_probs=62.3
Q ss_pred CCHHHHHHHHHHHHHhcC---HHHHHHHHHHHhhcCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHH
Q 013696 115 PTAVAYANRAMAYLKLRR---FQEAEDDCTEALNLDDR-YIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQ 190 (438)
Q Consensus 115 p~~~~~~~la~~~~~l~~---~~eA~~~~~~al~l~p~-~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~ 190 (438)
|.+.+-++.|.|+.+.++ ...++..++..+..+|. .-..+|.+|.+++++|+|.+|..+.+.+|+++|+|.++..-
T Consensus 38 vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~L 117 (134)
T 3o48_A 38 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 117 (134)
T ss_dssp SCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred CChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHH
Confidence 447888888888888764 44688888888888884 47789999999999999999999999999999999887543
No 220
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.76 E-value=5e-05 Score=71.73 Aligned_cols=91 Identities=11% Similarity=-0.045 Sum_probs=80.4
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHh-----ccHHHHHHHHHHHhccCCC--HHHHHHHHHHHHH-hc
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQ-----KKFKEAIDCYSRSIALSPT--AVAYANRAMAYLK-LR 131 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~-----g~y~~Ai~~y~~al~~~p~--~~~~~~la~~~~~-l~ 131 (438)
..+....|...++++++++|+.....+|..+|..|... |+.++|..+|+++++++|+ ..+++..|..++. .|
T Consensus 175 Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~g 254 (301)
T 3u64_A 175 LPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLN 254 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTT
T ss_pred HHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcC
Confidence 34557789999999999999966655578999999995 9999999999999999996 8889999999888 49
Q ss_pred CHHHHHHHHHHHhhcCCcc
Q 013696 132 RFQEAEDDCTEALNLDDRY 150 (438)
Q Consensus 132 ~~~eA~~~~~~al~l~p~~ 150 (438)
++++|...+++|+..+|..
T Consensus 255 d~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 255 NRAGFDEALDRALAIDPES 273 (301)
T ss_dssp CHHHHHHHHHHHHHCCGGG
T ss_pred CHHHHHHHHHHHHcCCCCC
Confidence 9999999999999998874
No 221
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.69 E-value=0.00071 Score=56.73 Aligned_cols=76 Identities=13% Similarity=0.067 Sum_probs=64.6
Q ss_pred CCCHHHHHHHHHHHHHhcCH---HHHHHHHHHHhhcCC-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHH
Q 013696 114 SPTAVAYANRAMAYLKLRRF---QEAEDDCTEALNLDD-RYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKK 189 (438)
Q Consensus 114 ~p~~~~~~~la~~~~~l~~~---~eA~~~~~~al~l~p-~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~ 189 (438)
.|...+.|+.|.|+.+..+. .+++..++..+..+| ..-..+|.+|.+++++|+|.+|..+.+.+|+++|+|.++..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 35588888999998887754 468888999888887 45778999999999999999999999999999999988754
No 222
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.68 E-value=0.00015 Score=77.29 Aligned_cols=144 Identities=13% Similarity=0.086 Sum_probs=104.8
Q ss_pred cCCCccchH-HHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccC-----------C-----------C
Q 013696 60 SYSRNYDPV-SHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALS-----------P-----------T 116 (438)
Q Consensus 60 ~~g~~~eAi-~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~-----------p-----------~ 116 (438)
..|+.++|+ ..|.+++...|..... +...+......|+++.|...|.+++... | .
T Consensus 355 ~~~~~~~a~r~il~rAi~~~P~s~~L--wl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~ 432 (679)
T 4e6h_A 355 EKNTDSTVITKYLKLGQQCIPNSAVL--AFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSK 432 (679)
T ss_dssp HHSCCTTHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccc
Confidence 346777886 8888888888876655 5577888888888888888888888742 3 1
Q ss_pred -HHHHHHHHHHHHHhcCHHHHHHHHHHHhhc-CCccHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhhCCCCHHHHH----
Q 013696 117 -AVAYANRAMAYLKLRRFQEAEDDCTEALNL-DDRYIKAYSRRATARKELGK-LKESIEDSEFALRLEPQNQEIKK---- 189 (438)
Q Consensus 117 -~~~~~~la~~~~~l~~~~eA~~~~~~al~l-~p~~~~a~~~lg~a~~~lg~-~~eA~~~~~~al~l~P~~~~~~~---- 189 (438)
..+|...+......|..+.|...|.+|++. .+.....|...|......|+ ++.|...|+++++..|+++..+.
T Consensus 433 ~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~ 512 (679)
T 4e6h_A 433 LTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLD 512 (679)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHH
Confidence 345777777777788888888888888887 44456677766766666654 88888888888888888877742
Q ss_pred ------HHHHHHHHHHHHHhhc
Q 013696 190 ------QLAEVKSLYEKEVFQK 205 (438)
Q Consensus 190 ------~l~~a~~~~~ka~~~~ 205 (438)
+...|..+|++++...
T Consensus 513 fe~~~~~~~~AR~lferal~~~ 534 (679)
T 4e6h_A 513 FLIYVNEESQVKSLFESSIDKI 534 (679)
T ss_dssp HHHHHTCHHHHHHHHHHHTTTS
T ss_pred HHHhCCCHHHHHHHHHHHHHhc
Confidence 3445556666665544
No 223
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.42 E-value=0.0016 Score=53.98 Aligned_cols=82 Identities=7% Similarity=0.018 Sum_probs=69.3
Q ss_pred ChhHHHHHHHHHHHHHhcc---HHHHHHHHHHHhccCCC--HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHH
Q 013696 81 TPDATSEKELGNECFKQKK---FKEAIDCYSRSIALSPT--AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYS 155 (438)
Q Consensus 81 ~~~a~~~~~~g~~~~~~g~---y~~Ai~~y~~al~~~p~--~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~ 155 (438)
.+...+.+++|+++.+..+ ...+|..+...+...|. -..++.+|..++++|+|.+|..+++.+++++|+|..|..
T Consensus 37 ~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~ 116 (134)
T 3o48_A 37 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 116 (134)
T ss_dssp GSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred CCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHH
Confidence 3444557799999998764 56799999999998885 889999999999999999999999999999999998876
Q ss_pred HHHHHHH
Q 013696 156 RRATARK 162 (438)
Q Consensus 156 ~lg~a~~ 162 (438)
....+-.
T Consensus 117 Lk~~Ie~ 123 (134)
T 3o48_A 117 LKSMVED 123 (134)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655443
No 224
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.35 E-value=0.0029 Score=53.01 Aligned_cols=80 Identities=6% Similarity=0.005 Sum_probs=67.9
Q ss_pred hhHHHHHHHHHHHHHhcc---HHHHHHHHHHHhccCCC--HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHH
Q 013696 82 PDATSEKELGNECFKQKK---FKEAIDCYSRSIALSPT--AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSR 156 (438)
Q Consensus 82 ~~a~~~~~~g~~~~~~g~---y~~Ai~~y~~al~~~p~--~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~ 156 (438)
+.....+++|+++.+..+ ..++|..++..+...|. -..++.+|..++++|+|.+|..+++.+|+++|+|..|...
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~L 116 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 116 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 344447799999999765 45799999999998885 8889999999999999999999999999999999888665
Q ss_pred HHHHH
Q 013696 157 RATAR 161 (438)
Q Consensus 157 lg~a~ 161 (438)
...+-
T Consensus 117 k~~Ie 121 (144)
T 1y8m_A 117 KSMVE 121 (144)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 225
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.26 E-value=0.0011 Score=57.01 Aligned_cols=90 Identities=16% Similarity=0.031 Sum_probs=59.9
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhccC---CC-------HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcC---------
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIALS---PT-------AVAYANRAMAYLKLRRFQEAEDDCTEALNLD--------- 147 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~~~---p~-------~~~~~~la~~~~~l~~~~eA~~~~~~al~l~--------- 147 (438)
++.....++..|.|+.|+-.+..++.+. |+ ..++..+|.+++..++|..|+..|++||++.
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~ 102 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKV 102 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 4455566666666666666666655442 22 3455666666666666666666666665331
Q ss_pred ----------------CccHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 013696 148 ----------------DRYIKAYSRRATARKELGKLKESIEDSEF 176 (438)
Q Consensus 148 ----------------p~~~~a~~~lg~a~~~lg~~~eA~~~~~~ 176 (438)
+.+....|.+|.||.++|++++|+..++.
T Consensus 103 ~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 103 RPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp --------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred cccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 22346889999999999999999998764
No 226
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.20 E-value=0.0045 Score=52.36 Aligned_cols=109 Identities=18% Similarity=0.056 Sum_probs=89.4
Q ss_pred cCCCCChhHHHHHHHHHHHHHhccH------HHHHHHHHHHhccCCC---------HHHHHHHHHHHHHhcCHHHHHHHH
Q 013696 76 MNEESTPDATSEKELGNECFKQKKF------KEAIDCYSRSIALSPT---------AVAYANRAMAYLKLRRFQEAEDDC 140 (438)
Q Consensus 76 ~~~p~~~~a~~~~~~g~~~~~~g~y------~~Ai~~y~~al~~~p~---------~~~~~~la~~~~~l~~~~eA~~~~ 140 (438)
-+.|++++. |.......-+.|+. +.-++.|++|+..-|. ..+|.+.|.. ..+++.++|.+.|
T Consensus 7 ~~~p~~yd~--W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy 83 (161)
T 4h7y_A 7 MMMANNPED--WLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYF 83 (161)
T ss_dssp ---CCSHHH--HHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHH
T ss_pred eeCCCCHHH--HHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHH
Confidence 356788888 66777777777888 8888999999997754 3455555644 6679999999999
Q ss_pred HHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH
Q 013696 141 TEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI 187 (438)
Q Consensus 141 ~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~ 187 (438)
..|+.+....++.|...|.--..+|+...|...+.+++-+.|...+.
T Consensus 84 ~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~ 130 (161)
T 4h7y_A 84 QMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEM 130 (161)
T ss_dssp HHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHH
Confidence 99999888889999999999999999999999999999999987654
No 227
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.87 E-value=0.001 Score=57.27 Aligned_cols=102 Identities=14% Similarity=0.044 Sum_probs=76.7
Q ss_pred CcCCCccchHHHHHhhhcCCCCChh-------HHHHHHHHHHHHHhccHHHHHHHHHHHhccCC---C------------
Q 013696 59 NSYSRNYDPVSHISSSLMNEESTPD-------ATSEKELGNECFKQKKFKEAIDCYSRSIALSP---T------------ 116 (438)
Q Consensus 59 y~~g~~~eAi~~~~~al~~~p~~~~-------a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p---~------------ 116 (438)
|+.|.|+.|+.....++....++++ +..+..+|..+|..|+|..|...|+++|.+.. .
T Consensus 31 ~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~s 110 (167)
T 3ffl_A 31 AAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSA 110 (167)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------
T ss_pred HHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccC
Confidence 4778999999999887765433332 34477899999999999999999999877531 1
Q ss_pred -----------HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHH
Q 013696 117 -----------AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATAR 161 (438)
Q Consensus 117 -----------~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~ 161 (438)
..+.+.+|.||.+++++.+|+..++.. -..-..++....+|..|
T Consensus 111 s~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 111 STPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp ------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS-CGGGCCHHHHHHHHHHC
T ss_pred CCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC-CchhcCHHHHHHHHHHh
Confidence 267799999999999999999986653 22234566666666654
No 228
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.87 E-value=0.012 Score=60.19 Aligned_cols=120 Identities=10% Similarity=-0.099 Sum_probs=86.8
Q ss_pred chHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHH-------------------
Q 013696 66 DPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAM------------------- 125 (438)
Q Consensus 66 eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~------------------- 125 (438)
.....|++++...|..+.. |...+..+...|+.+.|...|.+|+.. |. ...+...+.
T Consensus 197 Rv~~~ye~al~~~p~~~~l--W~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~ 273 (493)
T 2uy1_A 197 RMHFIHNYILDSFYYAEEV--YFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGE 273 (493)
T ss_dssp HHHHHHHHHHHHTTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHcCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhc
Confidence 4567999999988888777 778899999999999999999999999 87 322222221
Q ss_pred ---------------------HHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCC
Q 013696 126 ---------------------AYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG-KLKESIEDSEFALRLEPQ 183 (438)
Q Consensus 126 ---------------------~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg-~~~eA~~~~~~al~l~P~ 183 (438)
.....+..+.|...|.+| ...+.....|...|..-...| +++.|...|+.+++..|+
T Consensus 274 ~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~ 352 (493)
T 2uy1_A 274 AESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPD 352 (493)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTT
T ss_pred cchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCC
Confidence 122355677788888888 433334556666666666555 588888888888888888
Q ss_pred CHHHHH
Q 013696 184 NQEIKK 189 (438)
Q Consensus 184 ~~~~~~ 189 (438)
++..+.
T Consensus 353 ~~~~~~ 358 (493)
T 2uy1_A 353 STLLKE 358 (493)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 776543
No 229
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.83 E-value=0.023 Score=58.23 Aligned_cols=141 Identities=13% Similarity=0.118 Sum_probs=98.9
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHH---------hccHHHHHHHHHHHhcc--CCCHHHHHHHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFK---------QKKFKEAIDCYSRSIAL--SPTAVAYANRAMAYL 128 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~---------~g~y~~Ai~~y~~al~~--~p~~~~~~~la~~~~ 128 (438)
+.|++++|+..|++..... -.+....|..+-.+|.. .+..+.|...|.+.... .|+...|..+-.+|.
T Consensus 38 k~G~~~~A~~lf~~M~~~G-v~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~ 116 (501)
T 4g26_A 38 KKGDVLEALRLYDEARRNG-VQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAV 116 (501)
T ss_dssp TSCCHHHHHHHHHHHHHHT-CCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHcC-CCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 7789999999998877643 11223334444444443 34578888888877664 477888888888888
Q ss_pred HhcCHHHHHHHHHHHhhcC-CccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CCCHHH---------HHHHHHHHH
Q 013696 129 KLRRFQEAEDDCTEALNLD-DRYIKAYSRRATARKELGKLKESIEDSEFALRLE--PQNQEI---------KKQLAEVKS 196 (438)
Q Consensus 129 ~l~~~~eA~~~~~~al~l~-p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~--P~~~~~---------~~~l~~a~~ 196 (438)
+.|++++|...+....... .-+...|..+-.+|...|++++|...|+...... |+.... .+..++|.+
T Consensus 117 ~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ 196 (501)
T 4g26_A 117 AKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYK 196 (501)
T ss_dssp HHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHH
Confidence 9999999999988877653 2256778888888888999999999998877643 543322 345566666
Q ss_pred HHHHH
Q 013696 197 LYEKE 201 (438)
Q Consensus 197 ~~~ka 201 (438)
++++-
T Consensus 197 ll~~M 201 (501)
T 4g26_A 197 TLQRL 201 (501)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 230
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.66 E-value=0.022 Score=58.36 Aligned_cols=121 Identities=7% Similarity=0.012 Sum_probs=99.4
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHhcCHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIAL--SPTAVAYANRAMAYLKLRRFQEAE 137 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~--~p~~~~~~~la~~~~~l~~~~eA~ 137 (438)
..+.+++|...|.+..... -.++...|..+-..|.+.|++++|+..|.+..+. .|+...|..+-.+|.+.|++++|.
T Consensus 82 ~~~~l~~A~~lf~~M~~~G-~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~ 160 (501)
T 4g26_A 82 PNPGLSRGFDIFKQMIVDK-VVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAY 160 (501)
T ss_dssp CCHHHHHHHHHHHHHHHTT-CCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred hcchHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHH
Confidence 4456788999998876543 2234445778889999999999999999988775 477888999999999999999999
Q ss_pred HHHHHHhhcCC-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 013696 138 DDCTEALNLDD-RYIKAYSRRATARKELGKLKESIEDSEFALRLE 181 (438)
Q Consensus 138 ~~~~~al~l~p-~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~ 181 (438)
..|.......- -+...|..+-.++...|++++|...|++.-...
T Consensus 161 ~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g 205 (501)
T 4g26_A 161 EVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLV 205 (501)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhC
Confidence 99999887542 256788899999999999999999999987643
No 231
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.26 E-value=0.014 Score=62.58 Aligned_cols=111 Identities=6% Similarity=-0.049 Sum_probs=78.3
Q ss_pred ccchHHHHHhhhcCCCCChhHHHHHHHHHHH--HH-hccHHHHHHHHHHHhcc--------CCC-----------HHHHH
Q 013696 64 NYDPVSHISSSLMNEESTPDATSEKELGNEC--FK-QKKFKEAIDCYSRSIAL--------SPT-----------AVAYA 121 (438)
Q Consensus 64 ~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~--~~-~g~y~~Ai~~y~~al~~--------~p~-----------~~~~~ 121 (438)
++.|+..+++....+|..... +..+.+. .. ..+=-+|+....++++- .+. ...+.
T Consensus 265 ~~~a~~~le~L~~~~p~~~~~---~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~ 341 (754)
T 4gns_B 265 VDFTIDYLKGLTKKDPIHDIY---YKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLN 341 (754)
T ss_dssp HHHHHHHHHHHHHHCGGGHHH---HHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCchhHH---HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHH
Confidence 466888888888877644322 2222221 11 22344577777666631 111 22444
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 013696 122 NRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFA 177 (438)
Q Consensus 122 ~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~a 177 (438)
--+.-++..|+|+-|+...++|+...|.....|+.|+.+|..+|+|+.|+-.++-+
T Consensus 342 ~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 342 IQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 45666778899999999999999999999999999999999999999999766554
No 232
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.00 E-value=0.1 Score=53.13 Aligned_cols=115 Identities=4% Similarity=-0.130 Sum_probs=90.4
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHH--------------------------------------HHHHHHHHHHhccHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATS--------------------------------------EKELGNECFKQKKFK 101 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~--------------------------------------~~~~g~~~~~~g~y~ 101 (438)
..|+.+.|...|.+++.. |.+...+. |...+..+.+.+..+
T Consensus 225 ~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~ 303 (493)
T 2uy1_A 225 GIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLE 303 (493)
T ss_dssp HTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHH
Confidence 668999999999999998 87754321 122222233467789
Q ss_pred HHHHHHHHHhccCCC--HHHHHHHHHHHHHhc-CHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 013696 102 EAIDCYSRSIALSPT--AVAYANRAMAYLKLR-RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFA 177 (438)
Q Consensus 102 ~Ai~~y~~al~~~p~--~~~~~~la~~~~~l~-~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~a 177 (438)
.|...|.+| . .|. ...|...|..-...+ +++.|...|+.++...|+.+..|...+.....+|+.+.|...|+++
T Consensus 304 ~AR~i~~~A-~-~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 304 LFRKLFIEL-G-NEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDEENARALFKRL 380 (493)
T ss_dssp HHHHHHHHH-T-TSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHS
T ss_pred HHHHHHHHh-h-CCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999999999 3 444 667776776666666 6999999999999999999988888888888999999999999998
No 233
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.20 E-value=0.39 Score=41.35 Aligned_cols=119 Identities=12% Similarity=0.067 Sum_probs=84.6
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHhcCHHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDD 139 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~~~~~~~la~~~~~l~~~~eA~~~ 139 (438)
+..+|+.++-.-.-.+.. .++- -..++..++-.|.|..|+-++.. ++ ...+.+..+.||.++++|..|+..
T Consensus 14 kY~dYdt~~fLsa~L~~~---~~eY--~lL~~I~LyyngEY~R~Lf~L~~---lN-T~Ts~YYk~LCy~klKdYkkA~~~ 84 (242)
T 3kae_A 14 RYRDYETAIFLAACLLPC---KPEY--RMLMSIVLYLNGEYTRALFHLHK---LN-TCTSKYYESLCYKKKKDYKKAIKS 84 (242)
T ss_dssp HTTCHHHHHHHHHHHC-------CT--HHHHHHHHHHTTCHHHHHHHHHT---CC-BHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hcccccHHHHHHHHHccC---ChHH--HhhhhhhhhhcchHhHHHHHHHh---cc-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566555433333222 3343 23678999999999999877532 22 266667779999999999999999
Q ss_pred HHHHh--hcC---------------CccHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH
Q 013696 140 CTEAL--NLD---------------DRYIK-AYSRRATARKELGKLKESIEDSEFALRLEPQNQEI 187 (438)
Q Consensus 140 ~~~al--~l~---------------p~~~~-a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~ 187 (438)
.+..+ ..+ |.+-. -+..+|..+...|+-++|+.+|.......|-.+.+
T Consensus 85 le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~v 150 (242)
T 3kae_A 85 LESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPV 150 (242)
T ss_dssp HHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHH
T ss_pred HHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchH
Confidence 99999 332 33333 35678999999999999999999999999876544
No 234
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.63 E-value=0.35 Score=47.55 Aligned_cols=91 Identities=11% Similarity=-0.008 Sum_probs=74.4
Q ss_pred HHHHHHHHhccHHHHHHHHHHHhccCCC---H--------------------HHHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 013696 89 ELGNECFKQKKFKEAIDCYSRSIALSPT---A--------------------VAYANRAMAYLKLRRFQEAEDDCTEALN 145 (438)
Q Consensus 89 ~~g~~~~~~g~y~~Ai~~y~~al~~~p~---~--------------------~~~~~la~~~~~l~~~~eA~~~~~~al~ 145 (438)
..|......|+.+.|+..+.+|+.+... + .+...++.+++..|++.+|+..+..++.
T Consensus 120 ~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~ 199 (388)
T 2ff4_A 120 TAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTF 199 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3444455568888899999998887421 0 2334467788899999999999999999
Q ss_pred cCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 013696 146 LDDRYIKAYSRRATARKELGKLKESIEDSEFALR 179 (438)
Q Consensus 146 l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~ 179 (438)
.+|-+-.+|..+-.++...|+..+|+..|+++-+
T Consensus 200 ~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 200 EHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988754
No 235
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.37 E-value=0.23 Score=50.55 Aligned_cols=74 Identities=14% Similarity=0.100 Sum_probs=35.3
Q ss_pred HHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHH
Q 013696 89 ELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 162 (438)
Q Consensus 89 ~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~ 162 (438)
.+|....-...+..|..+|.+|+.+.|. ..+|..+|.+....|++-+|+-+|.+++......+.+..++...+.
T Consensus 157 ~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 157 HLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 3444444444444555555555555554 4445555554444444445555555554444444444444444433
No 236
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.29 E-value=0.21 Score=50.85 Aligned_cols=78 Identities=13% Similarity=-0.020 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 013696 119 AYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKS 196 (438)
Q Consensus 119 ~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (438)
.+..+|........+..|..+|.+|+.+.|++..+|+.+|.+....|+.-+|+-+|.+++......+.+..++.....
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 456678888888889999999999999999999999999999999999999999999999988778888777765443
No 237
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.10 E-value=0.11 Score=51.93 Aligned_cols=97 Identities=8% Similarity=-0.106 Sum_probs=78.6
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhccCCC----HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcC--Ccc----HHHHHH
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANRAMAYLKLRRFQEAEDDCTEALNLD--DRY----IKAYSR 156 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~----~~~~~~la~~~~~l~~~~eA~~~~~~al~l~--p~~----~~a~~~ 156 (438)
+..+|..|+..|+++.|+++|.++...... ...+.....+++..++|..+...+.++..+- ..+ ......
T Consensus 134 ~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~ 213 (429)
T 4b4t_R 134 WINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTY 213 (429)
T ss_dssp CHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHH
Confidence 669999999999999999999998876433 7888888999999999999999999996542 112 233455
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 013696 157 RATARKELGKLKESIEDSEFALRLEPQ 183 (438)
Q Consensus 157 lg~a~~~lg~~~eA~~~~~~al~l~P~ 183 (438)
.|.++...++|.+|...|..++.-...
T Consensus 214 ~gl~~l~~r~f~~Aa~~f~e~~~t~~~ 240 (429)
T 4b4t_R 214 YGIHCLAVRNFKEAAKLLVDSLATFTS 240 (429)
T ss_dssp HHHGGGGTSCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHhChHHHHHHHHHHHhccCCc
Confidence 677788899999999999988866543
No 238
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=93.40 E-value=0.89 Score=39.45 Aligned_cols=99 Identities=12% Similarity=-0.016 Sum_probs=65.7
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHhcCHHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDD 139 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~~~~~~~la~~~~~l~~~~eA~~~ 139 (438)
..|+++.|.+..... ++... |+.+|......|+++-|..||.++-. +..+...|...|+-+.-...
T Consensus 17 ~lg~l~~A~e~a~~l-----~~~~~--Wk~Lg~~AL~~gn~~lAe~cy~~~~D-------~~~L~~Ly~~tg~~e~L~kl 82 (177)
T 3mkq_B 17 EYGNLDAALDEAKKL-----NDSIT--WERLIQEALAQGNASLAEMIYQTQHS-------FDKLSFLYLVTGDVNKLSKM 82 (177)
T ss_dssp HTTCHHHHHHHHHHH-----CCHHH--HHHHHHHHHHTTCHHHHHHHHHHTTC-------HHHHHHHHHHHTCHHHHHHH
T ss_pred hcCCHHHHHHHHHHh-----CCHHH--HHHHHHHHHHcCChHHHHHHHHHhCC-------HHHHHHHHHHhCCHHHHHHH
Confidence 568888888876654 22333 88999999999999999999988644 23345566667776665555
Q ss_pred HHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 013696 140 CTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFA 177 (438)
Q Consensus 140 ~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~a 177 (438)
.+.|...+.. .....++..+|+++++++.|.+.
T Consensus 83 a~iA~~~g~~-----n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 83 QNIAQTREDF-----GSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHHHHHTTCH-----HHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHCccH-----HHHHHHHHHcCCHHHHHHHHHHC
Confidence 5555443322 22334566788888888777544
No 239
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=93.15 E-value=2.4 Score=36.56 Aligned_cols=82 Identities=11% Similarity=-0.015 Sum_probs=59.3
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHh--cc--CC-------------C--HHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSI--AL--SP-------------T--AVAY 120 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al--~~--~p-------------~--~~~~ 120 (438)
-.|.|..|+-++... +...+ .+-...||.+.++|..|+.+.+..+ .+ +| . .-.+
T Consensus 45 yngEY~R~Lf~L~~l-----NT~Ts--~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy 117 (242)
T 3kae_A 45 LNGEYTRALFHLHKL-----NTCTS--KYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFE 117 (242)
T ss_dssp HTTCHHHHHHHHHTC-----CBHHH--HHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHH
T ss_pred hcchHhHHHHHHHhc-----chHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHH
Confidence 557777666655432 23333 6677889999999999999999988 22 22 2 3456
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhcCC
Q 013696 121 ANRAMAYLKLRRFQEAEDDCTEALNLDD 148 (438)
Q Consensus 121 ~~la~~~~~l~~~~eA~~~~~~al~l~p 148 (438)
..+|..+...|+-++|+.++......+|
T Consensus 118 ~l~a~lltq~g~r~EaI~y~~~Sf~~~~ 145 (242)
T 3kae_A 118 SLLGDLCTLSGYREEGIGHYVRSFGKSF 145 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhcCHHHhhhHhhhhcCCcc
Confidence 6678888999999999999988876654
No 240
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=93.14 E-value=0.31 Score=52.07 Aligned_cols=57 Identities=14% Similarity=0.075 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEA 143 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~a 143 (438)
+...+..+...|+|+-|+.+-.+|+.+.|. -..|+.|+.||..+|+|+.|+-.+.-+
T Consensus 340 L~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 340 LNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 556778888999999999999999999999 999999999999999999998766555
No 241
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=92.44 E-value=0.57 Score=46.17 Aligned_cols=93 Identities=12% Similarity=-0.016 Sum_probs=75.2
Q ss_pred HHHHHHHHhccHHHHHHHHHHHhcc----CCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCC---cc----HHHH
Q 013696 89 ELGNECFKQKKFKEAIDCYSRSIAL----SPT---AVAYANRAMAYLKLRRFQEAEDDCTEALNLDD---RY----IKAY 154 (438)
Q Consensus 89 ~~g~~~~~~g~y~~Ai~~y~~al~~----~p~---~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p---~~----~~a~ 154 (438)
.+|..|+..|+|.+|+..+.+.+.- +.. ..++.....+|..++++..+...+.+|..... .+ +...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 7899999999999999999888773 222 67788889999999999999999999975531 22 2345
Q ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHhhC
Q 013696 155 SRRATARK-ELGKLKESIEDSEFALRLE 181 (438)
Q Consensus 155 ~~lg~a~~-~lg~~~eA~~~~~~al~l~ 181 (438)
..-|.++. ..++|..|..+|-.++.-.
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~~f 211 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFEGF 211 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHhcc
Confidence 56688888 8999999999999987543
No 242
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=92.32 E-value=2.8 Score=38.83 Aligned_cols=116 Identities=11% Similarity=0.005 Sum_probs=73.7
Q ss_pred CcCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC--HHHHHHHHHHHHHhcCHHHH
Q 013696 59 NSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT--AVAYANRAMAYLKLRRFQEA 136 (438)
Q Consensus 59 y~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~--~~~~~~la~~~~~l~~~~eA 136 (438)
+..|++++|++.....++.+|.+...+. .+...+.-.|+|+.|...++.+.+++|. +.+...+..+ .|
T Consensus 8 l~~g~L~~al~~~~~~VR~~P~da~~R~--~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI--------~a 77 (273)
T 1zbp_A 8 LSEGQLQQALELLIEAIKASPKDASLRS--SFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLV--------KA 77 (273)
T ss_dssp TTTTCHHHHHHHHHHHHHTCTTCHHHHH--HHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHH--------HH
T ss_pred HhCCCHHHHHHHHHHHHHhCCcCHHHHH--HHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHH--------HH
Confidence 4667788888888888888888888765 6777788888888888888888888887 2221112221 12
Q ss_pred HHHHHHHhhc--------CCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 013696 137 EDDCTEALNL--------DDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN 184 (438)
Q Consensus 137 ~~~~~~al~l--------~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~ 184 (438)
+..-...+.- .|.........+......|+.++|...-..++...|..
T Consensus 78 E~~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~~ 133 (273)
T 1zbp_A 78 AQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEK 133 (273)
T ss_dssp HHHHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCccc
Confidence 2222222211 12223334455666666788888887777777776654
No 243
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=92.06 E-value=1.2 Score=37.69 Aligned_cols=100 Identities=12% Similarity=0.006 Sum_probs=74.0
Q ss_pred cchHHHHHhhhcCCCCChh------HHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHH
Q 013696 65 YDPVSHISSSLMNEESTPD------ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAE 137 (438)
Q Consensus 65 ~eAi~~~~~al~~~p~~~~------a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~ 137 (438)
++-++.|++++..-|.... ++.|...+.. ...++.++|-..|+.|+.+... +.+|...|.--.++|+...|.
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kAR 114 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSK 114 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHH
Confidence 4556788888876654321 3334444433 5568999999999999998656 999999999999999999999
Q ss_pred HHHHHHhhcCCccHHHHHHHHHHHHHcCC
Q 013696 138 DDCTEALNLDDRYIKAYSRRATARKELGK 166 (438)
Q Consensus 138 ~~~~~al~l~p~~~~a~~~lg~a~~~lg~ 166 (438)
+.+.+|+.+.|..... +..|....+.|+
T Consensus 115 kILg~AiG~~~k~~~~-le~a~~nl~~~~ 142 (161)
T 4h7y_A 115 QLLQKAVERGAVPLEM-LEIALRNLNLQK 142 (161)
T ss_dssp HHHHHHHHTTCBCHHH-HHHHHHHHHTTC
T ss_pred HHHHHHhccCCCcHHH-HHHHHHhhhcCC
Confidence 9999999999875433 344444455554
No 244
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.03 E-value=0.29 Score=49.81 Aligned_cols=138 Identities=12% Similarity=-0.046 Sum_probs=69.0
Q ss_pred cCCCccchHHHHHhhhc---C---CCCC---hhHHHHHHHHHHHHHhccHHHHH--------------HHHHH-HhccCC
Q 013696 60 SYSRNYDPVSHISSSLM---N---EEST---PDATSEKELGNECFKQKKFKEAI--------------DCYSR-SIALSP 115 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~---~---~p~~---~~a~~~~~~g~~~~~~g~y~~Ai--------------~~y~~-al~~~p 115 (438)
+.+++++|..+-...+. + +... ..+..|+..+.++-..|+....+ ..|+. ++..|+
T Consensus 148 d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~D~ 227 (523)
T 4b4t_S 148 DSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKHDN 227 (523)
T ss_dssp -------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSCSSS
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhcccCc
Confidence 67888888887765541 1 1111 11233555555555556554321 12222 223455
Q ss_pred C--HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCC--cc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH
Q 013696 116 T--AVAYANRAMAYLKLRRFQEAEDDCTEALNLDD--RY---IKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK 188 (438)
Q Consensus 116 ~--~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p--~~---~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~ 188 (438)
. +.++..+-..|+..+.|+.|.....++.-... .+ ...+|..|.++...++|.+|.+++..|++..|.+..+.
T Consensus 228 ~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~a~ 307 (523)
T 4b4t_S 228 ETKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKSL 307 (523)
T ss_dssp CHHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSSCS
T ss_pred chhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchhhh
Confidence 5 77788888999999999999999999964322 12 45678899999999999999999999999998776555
Q ss_pred HHHHHHHHH
Q 013696 189 KQLAEVKSL 197 (438)
Q Consensus 189 ~~l~~a~~~ 197 (438)
+....+.++
T Consensus 308 gfr~~a~K~ 316 (523)
T 4b4t_S 308 GFLQQSNKL 316 (523)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 555555543
No 245
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=90.76 E-value=3 Score=46.04 Aligned_cols=96 Identities=8% Similarity=-0.077 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHhccHHHHHHHHHHHh-----ccCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcC-CccHHHHHHHHH
Q 013696 86 SEKELGNECFKQKKFKEAIDCYSRSI-----ALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLD-DRYIKAYSRRAT 159 (438)
Q Consensus 86 ~~~~~g~~~~~~g~y~~Ai~~y~~al-----~~~p~~~~~~~la~~~~~l~~~~eA~~~~~~al~l~-p~~~~a~~~lg~ 159 (438)
.+..+-..|.+.|+.++|...+.... ...|+...|.-+-..|.+.|++++|...|....... .-|...|..+-.
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~ 208 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQ 208 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 47788889999999999999996643 246889999999999999999999999999998654 235677777777
Q ss_pred HHHHcCCH-HHHHHHHHHHHhhC
Q 013696 160 ARKELGKL-KESIEDSEFALRLE 181 (438)
Q Consensus 160 a~~~lg~~-~eA~~~~~~al~l~ 181 (438)
++.+.|+. ++|...|++...-.
T Consensus 209 glcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 209 CMGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHT
T ss_pred HHHhCCCcHHHHHHHHHHHHHcC
Confidence 88888985 78889999888654
No 246
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=90.69 E-value=1.3 Score=41.13 Aligned_cols=60 Identities=15% Similarity=0.251 Sum_probs=38.1
Q ss_pred HHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHH
Q 013696 93 ECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIK 152 (438)
Q Consensus 93 ~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~ 152 (438)
.+++.|+.++|+......++.+|. +.....+...++-.|+|+.|..-++.+.+++|....
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 345566666666666666666666 555555666666666666666666666666666543
No 247
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=90.55 E-value=1.3 Score=47.04 Aligned_cols=44 Identities=16% Similarity=0.241 Sum_probs=29.7
Q ss_pred cCCCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRS 110 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~a 110 (438)
..|++++|.+..... ++... |..+|..+.+.|+++.|+.+|.++
T Consensus 664 ~~~~~~~A~~~~~~~-----~~~~~--W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 664 KVGQLTLARDLLTDE-----SAEMK--WRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHTCHHHHHHHHTTC-----CCHHH--HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHhh-----CcHhH--HHHHHHHHHHcCCHHHHHHHHHHc
Confidence 556777776664332 22333 678888888888888888888775
No 248
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=89.95 E-value=1.4 Score=43.26 Aligned_cols=84 Identities=12% Similarity=0.031 Sum_probs=65.8
Q ss_pred CCccchHHHHHhhhcCCCCC--------hhH------------HHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHH
Q 013696 62 SRNYDPVSHISSSLMNEEST--------PDA------------TSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAY 120 (438)
Q Consensus 62 g~~~eAi~~~~~al~~~p~~--------~~a------------~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~ 120 (438)
|+...|...+.+++.+-... ..+ .....++..+...|++.+|+..+.+++..+|- ..+|
T Consensus 129 ~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~ 208 (388)
T 2ff4_A 129 GRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYREPLW 208 (388)
T ss_dssp TCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 56667778888888754211 111 11345667788899999999999999999998 8899
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhh
Q 013696 121 ANRAMAYLKLRRFQEAEDDCTEALN 145 (438)
Q Consensus 121 ~~la~~~~~l~~~~eA~~~~~~al~ 145 (438)
..+-.+|...|+..+|+..|.++..
T Consensus 209 ~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 209 TQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999888754
No 249
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=88.24 E-value=1.9 Score=45.59 Aligned_cols=77 Identities=17% Similarity=0.143 Sum_probs=48.6
Q ss_pred HHHhccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcC--------CccHHHHHHHHHHHHHcC
Q 013696 94 CFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLD--------DRYIKAYSRRATARKELG 165 (438)
Q Consensus 94 ~~~~g~y~~Ai~~y~~al~~~p~~~~~~~la~~~~~l~~~~eA~~~~~~al~l~--------p~~~~a~~~lg~a~~~lg 165 (438)
....|+++.|.+.... -.+...|.++|..+++.++++.|+.+|.++-..+ ..+.+.+..++......|
T Consensus 662 ~l~~~~~~~A~~~~~~----~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~ 737 (814)
T 3mkq_A 662 ALKVGQLTLARDLLTD----ESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTG 737 (814)
T ss_dssp HHHHTCHHHHHHHHTT----CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hhhcCCHHHHHHHHHh----hCcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 3455666666655321 1237889999999999999999999999873322 234444445555555555
Q ss_pred CHHHHHHHH
Q 013696 166 KLKESIEDS 174 (438)
Q Consensus 166 ~~~eA~~~~ 174 (438)
++..|...|
T Consensus 738 ~~~~A~~~~ 746 (814)
T 3mkq_A 738 KFNLAFNAY 746 (814)
T ss_dssp CHHHHHHHH
T ss_pred chHHHHHHH
Confidence 555554443
No 250
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=88.02 E-value=7.9 Score=37.93 Aligned_cols=80 Identities=14% Similarity=0.066 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhc----CC--ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC---CCCHHHHHH
Q 013696 120 YANRAMAYLKLRRFQEAEDDCTEALNL----DD--RYIKAYSRRATARKELGKLKESIEDSEFALRLE---PQNQEIKKQ 190 (438)
Q Consensus 120 ~~~la~~~~~l~~~~eA~~~~~~al~l----~p--~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~---P~~~~~~~~ 190 (438)
-..+|..|+..|+|.+|...+.+.+.- |. .-...+.....+|..+|++..+...|.++.... +.++...+.
T Consensus 102 ~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~ 181 (394)
T 3txn_A 102 EARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGA 181 (394)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHH
Confidence 346889999999999998888877752 21 124567778888999999999999998887664 355666666
Q ss_pred HHHHHHHHH
Q 013696 191 LAEVKSLYE 199 (438)
Q Consensus 191 l~~a~~~~~ 199 (438)
+..+-..+.
T Consensus 182 i~~~~Gi~~ 190 (394)
T 3txn_A 182 LDLQSGILH 190 (394)
T ss_dssp HHHHHHHHH
T ss_pred HHHHhhHHH
Confidence 666555444
No 251
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.48 E-value=7.5 Score=38.68 Aligned_cols=97 Identities=12% Similarity=0.028 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHhc----cCCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHhh---cCCcc---
Q 013696 84 ATSEKELGNECFKQKKFKEAIDCYSRSIA----LSPT---AVAYANRAMAYLKLRRFQEAEDDCTEALN---LDDRY--- 150 (438)
Q Consensus 84 a~~~~~~g~~~~~~g~y~~Ai~~y~~al~----~~p~---~~~~~~la~~~~~l~~~~eA~~~~~~al~---l~p~~--- 150 (438)
+.....++..|...|+|.+|......... ..+. ...+......|+..++|..|...+.++.. -.+..
T Consensus 137 arl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~l 216 (445)
T 4b4t_P 137 ARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESL 216 (445)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHH
Confidence 33456889999999999999999887653 2222 67788888999999999999999998742 12222
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 013696 151 -IKAYSRRATARKELGKLKESIEDSEFALRL 180 (438)
Q Consensus 151 -~~a~~~lg~a~~~lg~~~eA~~~~~~al~l 180 (438)
...+...|..+...++|.+|..+|..++..
T Consensus 217 k~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 217 KLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 245667888999999999999999999865
No 252
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=84.57 E-value=2.4 Score=47.76 Aligned_cols=90 Identities=18% Similarity=0.119 Sum_probs=56.3
Q ss_pred HHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhc---------------------
Q 013696 89 ELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNL--------------------- 146 (438)
Q Consensus 89 ~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l--------------------- 146 (438)
.+...+...+.|+-|... +...|. +...+-+|.+|+..|++++|..+|.+|-.-
T Consensus 817 ~l~~~l~~~~~~~~~~~l----~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~ 892 (1139)
T 4fhn_B 817 ELVEKLFLFKQYNACMQL----IGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKY 892 (1139)
T ss_dssp HHHHHHHHHSCTTHHHHH----HHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTT
T ss_pred HHHHHHHHhhhHHHHHHH----hhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccc
Confidence 455566667777655442 222333 444567788888888888888888776310
Q ss_pred --CCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 013696 147 --DDRYIKAYSRRATARKELGKLKESIEDSEFALRLEP 182 (438)
Q Consensus 147 --~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P 182 (438)
....+..|+.....+...|-++.+++....|+...+
T Consensus 893 ~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~ 930 (1139)
T 4fhn_B 893 HHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKE 930 (1139)
T ss_dssp TSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCC
T ss_pred cccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 011244566666677777888888888777777654
No 253
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=82.08 E-value=13 Score=32.13 Aligned_cols=93 Identities=10% Similarity=0.086 Sum_probs=61.7
Q ss_pred HHHHHhccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCC--------ccHHHHHHHHHHHHH
Q 013696 92 NECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLDD--------RYIKAYSRRATARKE 163 (438)
Q Consensus 92 ~~~~~~g~y~~Ai~~y~~al~~~p~~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p--------~~~~a~~~lg~a~~~ 163 (438)
......|+++.|.+..... .+...|..+|...+..|+++-|+.+|.++-..+. .+..-+..++..-..
T Consensus 13 ~LAL~lg~l~~A~e~a~~l----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~iA~~ 88 (177)
T 3mkq_B 13 DLALEYGNLDAALDEAKKL----NDSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQT 88 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHH----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHh----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4456789999998886654 2378899999999999999999999998854331 233344455555555
Q ss_pred cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 013696 164 LGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 199 (438)
Q Consensus 164 lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 199 (438)
.|++.-|...+ -..++++++.++|.
T Consensus 89 ~g~~n~af~~~-----------l~lGdv~~~i~lL~ 113 (177)
T 3mkq_B 89 REDFGSMLLNT-----------FYNNSTKERSSIFA 113 (177)
T ss_dssp TTCHHHHHHHH-----------HHHTCHHHHHHHHH
T ss_pred CccHHHHHHHH-----------HHcCCHHHHHHHHH
Confidence 56655554332 12445556666554
No 254
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=79.98 E-value=4.5 Score=41.11 Aligned_cols=71 Identities=10% Similarity=-0.007 Sum_probs=58.1
Q ss_pred CChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCC---C---HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcc
Q 013696 80 STPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP---T---AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY 150 (438)
Q Consensus 80 ~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p---~---~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~ 150 (438)
....+..++.+-..|...+.|++|.....++.-... + ...++..|.++...++|.+|..++..|+...|.+
T Consensus 227 ~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 227 NETKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp SCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred cchhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 345666677888889999999999999999853221 1 5667889999999999999999999999987754
No 255
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=74.11 E-value=9.1 Score=42.25 Aligned_cols=84 Identities=10% Similarity=-0.092 Sum_probs=68.2
Q ss_pred cCCCccchHHHHHhhhc-----CCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHhcC
Q 013696 60 SYSRNYDPVSHISSSLM-----NEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIAL--SPTAVAYANRAMAYLKLRR 132 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~-----~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~--~p~~~~~~~la~~~~~l~~ 132 (438)
+.|+.++|...|...-. ..| ....|+.+-..|.+.|++++|++.|.+..+. .|+...|..+-.|+.+.|+
T Consensus 139 K~G~leeA~~Lf~eM~~m~~kG~~P---dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~glcK~G~ 215 (1134)
T 3spa_A 139 LTDQLPLAHHLLVVHHGQRQKRKLL---TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQCMGRQDQ 215 (1134)
T ss_dssp HHTCHHHHHHHHHHHHHSHHHHTTC---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTC
T ss_pred hCCCHHHHHHHHHHHHHHhhcCCCC---CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHhCCC
Confidence 67999999999966432 233 3445888999999999999999999998774 4888889998889999998
Q ss_pred -HHHHHHHHHHHhhc
Q 013696 133 -FQEAEDDCTEALNL 146 (438)
Q Consensus 133 -~~eA~~~~~~al~l 146 (438)
.++|...++.....
T Consensus 216 ~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 216 DAGTIERCLEQMSQE 230 (1134)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHc
Confidence 57888888887754
No 256
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=74.05 E-value=12 Score=38.92 Aligned_cols=117 Identities=11% Similarity=-0.068 Sum_probs=70.9
Q ss_pred CccchHHHHHhhhcCCCCChhH--HHHHHHHHHHHHhccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHhcCHHHHHHHH
Q 013696 63 RNYDPVSHISSSLMNEESTPDA--TSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDC 140 (438)
Q Consensus 63 ~~~eAi~~~~~al~~~p~~~~a--~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~~~~~~~la~~~~~l~~~~eA~~~~ 140 (438)
+.+.|...+...-....-+... ..+..+|..++..+...++...+.+......+....-.++...+..|++..|..++
T Consensus 229 d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~Alr~~d~~~a~~~~ 308 (618)
T 1qsa_A 229 DAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWL 308 (618)
T ss_dssp CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred CHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHHHHHCCCHHHHHHHH
Confidence 4566666665543322111111 11223333344445355667777776554444222222333345679999999988
Q ss_pred HHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 013696 141 TEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALR 179 (438)
Q Consensus 141 ~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~ 179 (438)
.+.-.-......+.|-+|.++..+|+.++|...|.++..
T Consensus 309 ~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 309 ARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 776554445678889999999999999999999998875
No 257
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=70.89 E-value=3.3 Score=31.24 Aligned_cols=35 Identities=17% Similarity=0.346 Sum_probs=23.3
Q ss_pred CCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhc
Q 013696 78 EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIA 112 (438)
Q Consensus 78 ~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~ 112 (438)
+|....+..+...|..+-..|+|++|+.+|..+++
T Consensus 10 ~~~~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 10 DPQSTAAATVLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 44445555566677777778888888888766554
No 258
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=68.78 E-value=28 Score=28.86 Aligned_cols=61 Identities=15% Similarity=0.079 Sum_probs=39.4
Q ss_pred HHHHHHH-HHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 013696 120 YANRAMA-YLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRL 180 (438)
Q Consensus 120 ~~~la~~-~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l 180 (438)
|..+|.- +...|+-++-.+.+...+.-++-++..++.+|.+|.++|+..+|-+.+.+|-+-
T Consensus 93 ~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 93 HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 3444433 334555555555555555656667888888888888888888888877776543
No 259
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=68.06 E-value=19 Score=35.52 Aligned_cols=88 Identities=13% Similarity=0.028 Sum_probs=66.9
Q ss_pred cCCCccchHHHHHhhhcCCCCC-hhHHHHHHHHHHHHHhccHHHHHHHHHHHhccC---CC----HHHHHHHHHHHHHhc
Q 013696 60 SYSRNYDPVSHISSSLMNEEST-PDATSEKELGNECFKQKKFKEAIDCYSRSIALS---PT----AVAYANRAMAYLKLR 131 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~~~p~~-~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~---p~----~~~~~~la~~~~~l~ 131 (438)
..|++++|...|.++....... .....+...-.+++..++|..+..++.++-.+. ++ .......|..++..+
T Consensus 143 ~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l~~r 222 (429)
T 4b4t_R 143 QIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAVR 222 (429)
T ss_dssp HHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGGGTS
T ss_pred HcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHhC
Confidence 7899999999999987633221 223346677788889999999999999987652 22 455566788888999
Q ss_pred CHHHHHHHHHHHhhcC
Q 013696 132 RFQEAEDDCTEALNLD 147 (438)
Q Consensus 132 ~~~eA~~~~~~al~l~ 147 (438)
+|..|-.+|-.++.-.
T Consensus 223 ~f~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 223 NFKEAAKLLVDSLATF 238 (429)
T ss_dssp CHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHhccC
Confidence 9999999998877543
No 260
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=67.50 E-value=36 Score=25.37 Aligned_cols=48 Identities=8% Similarity=0.022 Sum_probs=23.1
Q ss_pred HHHHHHcCCHHHHHHHHHHH-------HhhCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013696 158 ATARKELGKLKESIEDSEFA-------LRLEPQNQEIKKQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 158 g~a~~~lg~~~eA~~~~~~a-------l~l~P~~~~~~~~l~~a~~~~~ka~~~~ 205 (438)
|.-.-..|+|++|+..|..+ +...|+...-..-..++.+++.++-.++
T Consensus 23 Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~k~~lr~K~~eYl~RAE~LK 77 (86)
T 4a5x_A 23 AVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAENIK 77 (86)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334455555555544444 4445543322223345666666665554
No 261
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=65.98 E-value=45 Score=36.50 Aligned_cols=95 Identities=18% Similarity=0.138 Sum_probs=69.7
Q ss_pred HHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhh-cCC------------------
Q 013696 89 ELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALN-LDD------------------ 148 (438)
Q Consensus 89 ~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~-l~p------------------ 148 (438)
.+...+...|.|+-|.+ .+...|. +..-|-+|.+|+..|++++|..+|.+|-. +..
T Consensus 815 ~l~~~L~~~~~~~~a~e----L~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~ 890 (950)
T 4gq2_M 815 ELVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKY 890 (950)
T ss_dssp HHHHHHHHTTCHHHHHH----HGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHT
T ss_pred HHHHHHHHhcHHHHHHH----HHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcc
Confidence 46677788888876543 3455565 55568899999999999999999998752 111
Q ss_pred ----ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-CCCHHH
Q 013696 149 ----RYIKAYSRRATARKELGKLKESIEDSEFALRLE-PQNQEI 187 (438)
Q Consensus 149 ----~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~-P~~~~~ 187 (438)
.....|......+...|-|+.++...+.|+..- ++++..
T Consensus 891 e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l 934 (950)
T 4gq2_M 891 HHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDL 934 (950)
T ss_dssp TTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHH
T ss_pred cccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccc
Confidence 112356777888889999999999999999654 555544
No 262
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=65.64 E-value=32 Score=34.01 Aligned_cols=91 Identities=9% Similarity=-0.035 Sum_probs=67.8
Q ss_pred CCcC-cCCCccchHHHHHhhhc----CCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhc----cCCC----HHHHHH
Q 013696 56 PSGN-SYSRNYDPVSHISSSLM----NEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIA----LSPT----AVAYAN 122 (438)
Q Consensus 56 ~~~y-~~g~~~eAi~~~~~al~----~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~----~~p~----~~~~~~ 122 (438)
+..| ..|++.+|...+..... ..+.......+......|...++|..|...++++.. ..+. ...+..
T Consensus 144 a~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~ 223 (445)
T 4b4t_P 144 VEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNL 223 (445)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHH
Confidence 3445 77999999999887653 222222344466788899999999999999988632 2222 566778
Q ss_pred HHHHHHHhcCHHHHHHHHHHHhhc
Q 013696 123 RAMAYLKLRRFQEAEDDCTEALNL 146 (438)
Q Consensus 123 la~~~~~l~~~~eA~~~~~~al~l 146 (438)
.|..+...++|.+|-.+|..++..
T Consensus 224 ~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 224 LVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHhc
Confidence 899999999999999999888753
No 263
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=63.68 E-value=11 Score=27.42 Aligned_cols=30 Identities=27% Similarity=0.496 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhccCCC
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIALSPT 116 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~ 116 (438)
...+|..+...|++++|+.+|.+|+...|+
T Consensus 20 eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 20 EIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 347899999999999999999999999988
No 264
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=63.00 E-value=22 Score=25.76 Aligned_cols=38 Identities=13% Similarity=0.136 Sum_probs=31.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 013696 155 SRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLA 192 (438)
Q Consensus 155 ~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~ 192 (438)
..+|..+...|++++|..+|-+|+...|.-.+...-|.
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q 58 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQ 58 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 35899999999999999999999999998766655444
No 265
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=61.18 E-value=1.1e+02 Score=28.80 Aligned_cols=27 Identities=7% Similarity=-0.315 Sum_probs=23.9
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHH
Q 013696 149 RYIKAYSRRATARKELGKLKESIEDSE 175 (438)
Q Consensus 149 ~~~~a~~~lg~a~~~lg~~~eA~~~~~ 175 (438)
.++..+..+|..|..-|++.+|..+|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 468889999999999999999998884
No 266
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=60.45 E-value=51 Score=31.32 Aligned_cols=26 Identities=12% Similarity=-0.059 Sum_probs=22.6
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHH
Q 013696 149 RYIKAYSRRATARKELGKLKESIEDS 174 (438)
Q Consensus 149 ~~~~a~~~lg~a~~~lg~~~eA~~~~ 174 (438)
.++..+..+|..|.+-|+|.+|..+|
T Consensus 134 Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 134 GDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 46778888999999999999998887
No 267
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=59.81 E-value=11 Score=28.61 Aligned_cols=26 Identities=35% Similarity=0.267 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH
Q 013696 153 AYSRRATARKELGKLKESIEDSEFAL 178 (438)
Q Consensus 153 a~~~lg~a~~~lg~~~eA~~~~~~al 178 (438)
.+-+++..+...|+|++|+++.+++.
T Consensus 17 ~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 45567777777777777766555544
No 268
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=57.99 E-value=38 Score=25.49 Aligned_cols=47 Identities=19% Similarity=0.200 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC---HHHH-HHHHHHHHH
Q 013696 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT---AVAY-ANRAMAYLK 129 (438)
Q Consensus 83 ~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~---~~~~-~~la~~~~~ 129 (438)
.++.+...|..+++.++|.+|+..|+++..+..+ -.++ +.++.|--+
T Consensus 52 ~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~i~ki~~fyl~ec~kk 102 (106)
T 2vkj_A 52 KARSLIAEGKDLFETANYGEALVFFEKALNLSDNEEIKKIASFYLEECRKK 102 (106)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHccccCHHHHHHHHHHHHHHHHH
Confidence 4566778899999999999999999999877655 3333 667777544
No 269
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=57.82 E-value=13 Score=27.56 Aligned_cols=37 Identities=11% Similarity=0.092 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013696 169 ESIEDSEFALRLEPQNQEIKKQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 169 eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ka~~~~ 205 (438)
+|++.|..+++..|+...-..-..++.+++.++-.++
T Consensus 36 ~aie~l~~~lk~e~d~~~k~~ir~K~~eY~~RAE~Lk 72 (83)
T 2v6y_A 36 KAIEVLSQIIVLYPESVARTAYEQMINEYKKRISYLE 72 (83)
T ss_dssp HHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555556666655433334455566666665554
No 270
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=57.32 E-value=12 Score=27.82 Aligned_cols=26 Identities=23% Similarity=0.183 Sum_probs=18.2
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhc
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIA 112 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~ 112 (438)
+...|..+-+.|+|++|+.+|..+++
T Consensus 22 lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 22 YAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 44566666777888888887766655
No 271
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=56.85 E-value=12 Score=27.85 Aligned_cols=35 Identities=9% Similarity=-0.071 Sum_probs=16.1
Q ss_pred HHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHhh
Q 013696 170 SIEDSEFALRLEPQNQEIKKQLAEVKSLYEKEVFQ 204 (438)
Q Consensus 170 A~~~~~~al~l~P~~~~~~~~l~~a~~~~~ka~~~ 204 (438)
|++.|..+++..|+......-..++.+++.++-.+
T Consensus 45 aie~l~~alk~e~d~~~k~~ir~K~~eY~~RAE~L 79 (83)
T 2w2u_A 45 AIEVLAQLVSLYRDGSTAAIYEQMINEYKRRIEVL 79 (83)
T ss_dssp HHHHHHHHHHHSTTSSTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555555433223334455555555433
No 272
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=55.40 E-value=56 Score=27.51 Aligned_cols=29 Identities=17% Similarity=0.287 Sum_probs=23.6
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHhccCCC
Q 013696 88 KELGNECFKQKKFKEAIDCYSRSIALSPT 116 (438)
Q Consensus 88 ~~~g~~~~~~g~y~~Ai~~y~~al~~~p~ 116 (438)
+..|..+|+.|+|-+|-+.++.+....+.
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~ 64 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGR 64 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCS
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCC
Confidence 46788889999999999999988887543
No 273
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=55.40 E-value=1.6e+02 Score=30.42 Aligned_cols=116 Identities=9% Similarity=-0.050 Sum_probs=78.8
Q ss_pred CCccchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHhcCHHHHHHHH
Q 013696 62 SRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDC 140 (438)
Q Consensus 62 g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~-~~~~~~la~~~~~l~~~~eA~~~~ 140 (438)
+...++...+........+ .... ....+.+ ++.|++..|..++.+.-..... +...|-+|.++..+|+.++|...|
T Consensus 266 ~~~~~~~~~~~~~~~~~~~-~~~~-e~~~r~A-lr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~ 342 (618)
T 1qsa_A 266 DVTDEQAKWRDDAIMRSQS-TSLI-ERRVRMA-LGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEIL 342 (618)
T ss_dssp TCCHHHHHHHHHHHHTCCC-HHHH-HHHHHHH-HHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCChHHHHHHHhccccCCC-hHHH-HHHHHHH-HHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHH
Confidence 3355677777776554433 2222 3344554 4679999999999775543333 778899999999999999999999
Q ss_pred HHHhhcC-----------------------Cc-----cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 013696 141 TEALNLD-----------------------DR-----YIKAYSRRATARKELGKLKESIEDSEFALRL 180 (438)
Q Consensus 141 ~~al~l~-----------------------p~-----~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l 180 (438)
..+..-. +. ....-..++..+..+|....|...+..++.-
T Consensus 343 ~~~a~~~~fYg~lAa~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~r~~~L~~~g~~~~a~~ew~~~~~~ 410 (618)
T 1qsa_A 343 HQLMQQRGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKS 410 (618)
T ss_dssp HHHHTSCSHHHHHHHHHTTCCCCCCCCCCCSCCCCHHHHSHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHhcCCChHHHHHHHHcCCCCCCCCCCCChhHHhhhccChHHHHHHHHHHCCChhhHHHHHHHHHhc
Confidence 9887421 00 0112456677788888888888888777653
No 274
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=54.99 E-value=84 Score=34.34 Aligned_cols=85 Identities=12% Similarity=0.005 Sum_probs=60.1
Q ss_pred cCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhcc-C--------------------CC---HHHHHHHHHHHHHhc
Q 013696 76 MNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIAL-S--------------------PT---AVAYANRAMAYLKLR 131 (438)
Q Consensus 76 ~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~-~--------------------p~---~~~~~~la~~~~~l~ 131 (438)
..-|.++.. -+.+|.+|...|++++|..+|.+|-.- . +. ...|......+...+
T Consensus 834 ~~~~~t~~~--~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~ 911 (950)
T 4gq2_M 834 GWLNSDPIA--VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEES 911 (950)
T ss_dssp GGCCSSHHH--HHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTT
T ss_pred hhcCCChHH--HHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcC
Confidence 344455544 478999999999999999999876531 0 01 236777888899999
Q ss_pred CHHHHHHHHHHHhhc-CCccHH----HHHHHHHHHH
Q 013696 132 RFQEAEDDCTEALNL-DDRYIK----AYSRRATARK 162 (438)
Q Consensus 132 ~~~eA~~~~~~al~l-~p~~~~----a~~~lg~a~~ 162 (438)
-|+-++..++.||+. .+++.. .|.++=.+..
T Consensus 912 a~~~vi~fA~lAI~~~~~dd~~l~~~l~~r~f~~a~ 947 (950)
T 4gq2_M 912 AYIDALEFSLLADASKETDDEDLSIAITHETLKTAC 947 (950)
T ss_dssp CHHHHHHHHHHHHHTCCSCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhcccCCccchHHHHHHHHHHHh
Confidence 999999999999974 344443 4444443333
No 275
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=54.05 E-value=15 Score=27.30 Aligned_cols=26 Identities=27% Similarity=0.339 Sum_probs=17.4
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhc
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIA 112 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~ 112 (438)
+...|..+-+.|+|++|+.+|..+++
T Consensus 14 lv~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 14 YAILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 44556666777777777777766554
No 276
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=52.15 E-value=33 Score=34.14 Aligned_cols=100 Identities=9% Similarity=-0.030 Sum_probs=67.6
Q ss_pred cHHHHHHHHHHHhccC------------CC--H---HHHHHHHHHHHHhcCHHHHHHHHHHHhhcC--------C--ccH
Q 013696 99 KFKEAIDCYSRSIALS------------PT--A---VAYANRAMAYLKLRRFQEAEDDCTEALNLD--------D--RYI 151 (438)
Q Consensus 99 ~y~~Ai~~y~~al~~~------------p~--~---~~~~~la~~~~~l~~~~eA~~~~~~al~l~--------p--~~~ 151 (438)
..++|.....++.... |. . ....++-.+|+++++...|...+...-... | .-+
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v 220 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQI 220 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceE
Confidence 4567777777777652 11 1 123455688999999888877765442221 1 224
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhh-CCCC---HHHHHHHHHHHHHH
Q 013696 152 KAYSRRATARKELGKLKESIEDSEFALRL-EPQN---QEIKKQLAEVKSLY 198 (438)
Q Consensus 152 ~a~~~lg~a~~~lg~~~eA~~~~~~al~l-~P~~---~~~~~~l~~a~~~~ 198 (438)
..+|.+|..+...++|.+|.+++..|++. .|.. +...++...++.++
T Consensus 221 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~~~~~~~~~n~~~ILkyL 271 (455)
T 3t5v_B 221 EYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLPLTNQAITRNGTRILNYM 271 (455)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_pred eeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCccccchhhhhHHHHHHHHH
Confidence 56889999999999999999999999999 7754 22344445555443
No 277
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=51.77 E-value=53 Score=36.68 Aligned_cols=95 Identities=13% Similarity=0.052 Sum_probs=72.4
Q ss_pred CCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccC--------------------C--C--HHHHHHHHHHHHHhcCHH
Q 013696 79 ESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALS--------------------P--T--AVAYANRAMAYLKLRRFQ 134 (438)
Q Consensus 79 p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~--------------------p--~--~~~~~~la~~~~~l~~~~ 134 (438)
|.++.. .+.+|.++...|++++|..+|.++-.-- + . +..|......+.+.+.++
T Consensus 839 ~~~~~~--~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~ 916 (1139)
T 4fhn_B 839 NSDPIA--VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYI 916 (1139)
T ss_dssp CCCHHH--HHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCH
T ss_pred cCCcHH--HHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHH
Confidence 344444 4789999999999999999998874211 0 0 345667777888889999
Q ss_pred HHHHHHHHHhhcCC-ccH----HHHHHHHHHHHHcCCHHHHHHHHH
Q 013696 135 EAEDDCTEALNLDD-RYI----KAYSRRATARKELGKLKESIEDSE 175 (438)
Q Consensus 135 eA~~~~~~al~l~p-~~~----~a~~~lg~a~~~lg~~~eA~~~~~ 175 (438)
.+++....||...+ ++. ..|.++=..+..+|+|++|...+.
T Consensus 917 ~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 917 DALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALM 962 (1139)
T ss_dssp HHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHH
T ss_pred HHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 99999999998654 332 257888888999999999987774
No 278
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=49.92 E-value=25 Score=26.70 Aligned_cols=37 Identities=11% Similarity=0.021 Sum_probs=21.3
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013696 169 ESIEDSEFALRLEPQNQEIKKQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 169 eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ka~~~~ 205 (438)
+|++.|..+++..|+...-..-..++.+++.++-.+.
T Consensus 40 ~Aie~l~~alk~e~~~~~k~~l~~K~~eYl~RAE~LK 76 (93)
T 1wfd_A 40 EGIDMLLQVLKGTKESSKRCVLRTKISGYMDRAENIK 76 (93)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555666666655443334456666777766665
No 279
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=49.38 E-value=19 Score=27.59 Aligned_cols=30 Identities=27% Similarity=0.496 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhccCCC
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIALSPT 116 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~ 116 (438)
...+|..+...|+++.|+.+|.+|+...|.
T Consensus 23 eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 23 EIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 357899999999999999999999999887
No 280
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=49.11 E-value=38 Score=25.70 Aligned_cols=28 Identities=7% Similarity=-0.003 Sum_probs=22.1
Q ss_pred HHHHHHHHhccHHHHHHHHHHHhccCCC
Q 013696 89 ELGNECFKQKKFKEAIDCYSRSIALSPT 116 (438)
Q Consensus 89 ~~g~~~~~~g~y~~Ai~~y~~al~~~p~ 116 (438)
..|..+|+.|+|-+|-+.++......|.
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~~ 33 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKATG 33 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCCC
Confidence 4577888888888888888888877754
No 281
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=48.01 E-value=37 Score=26.98 Aligned_cols=38 Identities=13% Similarity=0.164 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhhCCCCHHHHH-HHHHHHHHHHHHHhhc
Q 013696 168 KESIEDSEFALRLEPQNQEIKK-QLAEVKSLYEKEVFQK 205 (438)
Q Consensus 168 ~eA~~~~~~al~l~P~~~~~~~-~l~~a~~~~~ka~~~~ 205 (438)
.+|+++|..+++..+.+..... -..++..++.++-.+.
T Consensus 42 ~~Aie~l~~alk~e~~~~~~k~~lr~K~~eYl~RAE~LK 80 (117)
T 2cpt_A 42 QHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLK 80 (117)
T ss_dssp HHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555556666666665433 4456666777776666
No 282
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=44.23 E-value=36 Score=26.03 Aligned_cols=39 Identities=13% Similarity=0.147 Sum_probs=31.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 013696 155 SRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAE 193 (438)
Q Consensus 155 ~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~ 193 (438)
..+|..+...|+++.|+.+|-+|+.+.|.-.+...-|..
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~q~ 62 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQ 62 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 358999999999999999999999999976655544443
No 283
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=44.12 E-value=29 Score=26.32 Aligned_cols=25 Identities=24% Similarity=0.223 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHH
Q 013696 119 AYANRAMAYLKLRRFQEAEDDCTEA 143 (438)
Q Consensus 119 ~~~~la~~~~~l~~~~eA~~~~~~a 143 (438)
.+..++..+++.|+|++||.+..+|
T Consensus 17 ~~~RrAe~ll~~gkydeAIech~kA 41 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhhhHHHHHHhcCCHHHHHHHHHHH
Confidence 3444555555566666665554443
No 284
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=42.07 E-value=29 Score=26.33 Aligned_cols=26 Identities=19% Similarity=0.381 Sum_probs=16.7
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhc
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIA 112 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~ 112 (438)
+...|..+-..|+|++|+.+|..+++
T Consensus 18 lv~~Ave~D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 18 VLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 44555666667777777777665444
No 285
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=41.97 E-value=1.3e+02 Score=26.35 Aligned_cols=82 Identities=12% Similarity=0.062 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHh--hcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 013696 117 AVAYANRAMAYLKLRRFQEAEDDCTEAL--NLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (438)
Q Consensus 117 ~~~~~~la~~~~~l~~~~eA~~~~~~al--~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a 194 (438)
..+|...+.++ ..++..++...|.... .+.-..+..|...|..+...|++.+|...|+.+++-.-. -...+.++
T Consensus 80 LklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~---P~~rL~~~ 155 (202)
T 3esl_A 80 LKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCR---PYNRLLRS 155 (202)
T ss_dssp HHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB---SHHHHHHH
T ss_pred HHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc---cHHHHHHH
Confidence 44444444433 1233556666666665 455677888888899999999999999999999986532 23445555
Q ss_pred HHHHHHHH
Q 013696 195 KSLYEKEV 202 (438)
Q Consensus 195 ~~~~~ka~ 202 (438)
...+..-+
T Consensus 156 ~~~F~~R~ 163 (202)
T 3esl_A 156 LSNYEDRL 163 (202)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555433
No 286
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=41.52 E-value=30 Score=25.57 Aligned_cols=26 Identities=12% Similarity=0.158 Sum_probs=17.0
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhc
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIA 112 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~ 112 (438)
+...|...-..|+|++|+.+|..+++
T Consensus 16 l~~~Av~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 16 LVQKAIDLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 44555556667778888777766554
No 287
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=41.11 E-value=1.2e+02 Score=25.44 Aligned_cols=81 Identities=16% Similarity=0.169 Sum_probs=52.5
Q ss_pred HHHHHHHHhccHHHHHHHHHHHhccCCC---HHHHHHHHHHHHHhcCHHHH-HHHHHHHhhcCCccHHHHHHHHHHHHHc
Q 013696 89 ELGNECFKQKKFKEAIDCYSRSIALSPT---AVAYANRAMAYLKLRRFQEA-EDDCTEALNLDDRYIKAYSRRATARKEL 164 (438)
Q Consensus 89 ~~g~~~~~~g~y~~Ai~~y~~al~~~p~---~~~~~~la~~~~~l~~~~eA-~~~~~~al~l~p~~~~a~~~lg~a~~~l 164 (438)
..++..|-..+|...|..+.. .+|. ...-+-+|..|.+...+.+- .......+.+.. .--+.+-|+|...
T Consensus 13 i~a~~afl~~dYs~VI~~L~~---~~~~~Lp~~~kY~LA~SYI~~e~Ls~eQKenIln~itlkS---de~yL~YWIyiGR 86 (161)
T 2ynq_A 13 IQSTELFLQNKYSDVITTLED---YAPEDMPYVIQYELASSYVMTESLTEEQRQTVSNNITLKT---DEQYMLYWIYIGR 86 (161)
T ss_dssp HHHHHHHTTTCHHHHHHHHTT---SCGGGSCHHHHHHHHHHHHHTSSSCHHHHHHHHHTCCTTS---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHhc---CChhhCChhHHHHHHHHHHHccCCCHHHHHHHHhhCCccC---CHHHHHHHHHHcC
Confidence 457778888999988887654 5665 66788899999988766532 222222332221 2223455667778
Q ss_pred CCHHHHHHHHH
Q 013696 165 GKLKESIEDSE 175 (438)
Q Consensus 165 g~~~eA~~~~~ 175 (438)
|++++|+..-.
T Consensus 87 g~~~eAlDiA~ 97 (161)
T 2ynq_A 87 SQSEEALELAR 97 (161)
T ss_dssp TCHHHHHHHHH
T ss_pred CchHHHHHHHH
Confidence 99999977644
No 288
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=40.20 E-value=1.4e+02 Score=24.68 Aligned_cols=49 Identities=8% Similarity=-0.035 Sum_probs=38.5
Q ss_pred HHHHHHHHHHhccCC--C-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCc
Q 013696 101 KEAIDCYSRSIALSP--T-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDR 149 (438)
Q Consensus 101 ~~Ai~~y~~al~~~p--~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~ 149 (438)
.++...|.-.....= . +..|-..|..+...|++.+|...|..+|+....
T Consensus 82 ~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 133 (152)
T 4a1g_A 82 SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAE 133 (152)
T ss_dssp SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 347777777766543 3 788888899999999999999999999987643
No 289
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=39.57 E-value=53 Score=32.67 Aligned_cols=63 Identities=13% Similarity=-0.016 Sum_probs=47.1
Q ss_pred HHHHHHHHHhccHHHHHHHHHHH--------hccCCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHhhc-CCcc
Q 013696 88 KELGNECFKQKKFKEAIDCYSRS--------IALSPT---AVAYANRAMAYLKLRRFQEAEDDCTEALNL-DDRY 150 (438)
Q Consensus 88 ~~~g~~~~~~g~y~~Ai~~y~~a--------l~~~p~---~~~~~~la~~~~~l~~~~eA~~~~~~al~l-~p~~ 150 (438)
..+-.+|++.++...|-..+... +...|. ...+|.+|..++..++|.+|..++..|+.. .|..
T Consensus 180 n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 180 NKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 34446788889888777776543 222333 566888999999999999999999999988 6644
No 290
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=39.53 E-value=52 Score=28.69 Aligned_cols=56 Identities=13% Similarity=0.087 Sum_probs=40.6
Q ss_pred CCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCC------HHHHHHHHHHHHHhcCH
Q 013696 78 EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT------AVAYANRAMAYLKLRRF 133 (438)
Q Consensus 78 ~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~------~~~~~~la~~~~~l~~~ 133 (438)
.|....+...+.+|..++.+++|.+|.+++..|+...|. ..++..+--+-+-+|++
T Consensus 8 ~~~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~i 69 (203)
T 3t5x_A 8 YSTAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHM 69 (203)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCC
Confidence 344455666889999999999999999999999998876 23333444444556764
No 291
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=39.19 E-value=1.1e+02 Score=22.33 Aligned_cols=45 Identities=11% Similarity=0.025 Sum_probs=23.6
Q ss_pred HHHcCCHHHHHHHHHHH-------HhhCCCCHHHHHHHHHHHHHHHHHHhhc
Q 013696 161 RKELGKLKESIEDSEFA-------LRLEPQNQEIKKQLAEVKSLYEKEVFQK 205 (438)
Q Consensus 161 ~~~lg~~~eA~~~~~~a-------l~l~P~~~~~~~~l~~a~~~~~ka~~~~ 205 (438)
.-..|+|++|+..|..+ ++..|+...-..-..++..++.++-.+.
T Consensus 23 ~D~~g~y~eAl~~Y~~aie~l~~a~k~e~~~~~k~~l~~k~~eYl~RAE~Lk 74 (85)
T 2v6x_A 23 LDTATQYEEAYTAYYNGLDYLMLALKYEKNPKSKDLIRAKFTEYLNRAEQLK 74 (85)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555655555555544 4445544333334456666666665555
No 292
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=38.99 E-value=1.7e+02 Score=24.54 Aligned_cols=59 Identities=12% Similarity=0.027 Sum_probs=44.5
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhcCCcc------HHHHHH-HHHHH--HHcCCHHHHHHHHHHHHh
Q 013696 121 ANRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSR-RATAR--KELGKLKESIEDSEFALR 179 (438)
Q Consensus 121 ~~la~~~~~l~~~~eA~~~~~~al~l~p~~------~~a~~~-lg~a~--~~lg~~~eA~~~~~~al~ 179 (438)
+..|..++..|+|-+|-+.++.+-.-.+.. ...+.. +|.++ ...|+...|...+.+++.
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 445677778899999999999998776543 344445 44444 457999999999999986
No 293
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=38.92 E-value=32 Score=27.36 Aligned_cols=24 Identities=17% Similarity=0.227 Sum_probs=14.5
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHH
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRS 110 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~a 110 (438)
+...|...-..|+|++|+.+|..+
T Consensus 21 lv~~Ave~D~ag~y~eAl~lY~~A 44 (117)
T 2cpt_A 21 LASKAAQEDKAGNYEEALQLYQHA 44 (117)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHH
Confidence 334455555667777777776543
No 294
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=38.51 E-value=52 Score=28.68 Aligned_cols=32 Identities=16% Similarity=-0.010 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCc
Q 013696 118 VAYANRAMAYLKLRRFQEAEDDCTEALNLDDR 149 (438)
Q Consensus 118 ~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~ 149 (438)
..++.+|..++..++|.+|..++..|+..-|.
T Consensus 15 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~ 46 (203)
T 3t5x_A 15 TYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHR 46 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCH
Confidence 34455555555555555555555555555443
No 295
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=36.80 E-value=2.1e+02 Score=24.89 Aligned_cols=51 Identities=12% Similarity=0.059 Sum_probs=40.1
Q ss_pred ccHHHHHHHHHHHhccCC--C-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCC
Q 013696 98 KKFKEAIDCYSRSIALSP--T-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDD 148 (438)
Q Consensus 98 g~y~~Ai~~y~~al~~~p--~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p 148 (438)
+...++...|.-.....= . +..|-..|..+...|+|.+|...|..+|+...
T Consensus 93 ~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A 146 (202)
T 3esl_A 93 NNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNC 146 (202)
T ss_dssp TCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred cccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 336677888777766543 3 78888889999999999999999999998664
No 296
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=34.93 E-value=23 Score=26.06 Aligned_cols=27 Identities=15% Similarity=0.202 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhcc
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIAL 113 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~~ 113 (438)
...+|.-|...|+|+.|+.+|+.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 446788888999999999999888764
No 297
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=34.90 E-value=1.5e+02 Score=24.88 Aligned_cols=66 Identities=11% Similarity=0.053 Sum_probs=0.0
Q ss_pred cchHHHHHhhhcCCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHh
Q 013696 65 YDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKL 130 (438)
Q Consensus 65 ~eAi~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~~~~~~~la~~~~~l 130 (438)
.++...|.......=....+..|-..|..+...|+|.+|...|..+|+....|.-....+...+..
T Consensus 77 ~~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P~~~L~~~~~~F~~ 142 (164)
T 2wvi_A 77 NEPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPLERLQSQHRQFQA 142 (164)
T ss_dssp SCHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
No 298
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=32.93 E-value=35 Score=31.10 Aligned_cols=39 Identities=13% Similarity=0.048 Sum_probs=22.9
Q ss_pred HHHHHHHHHHhccCC--chhHHHhhcChhhHHHHHHHHHHh
Q 013696 375 VDLAIKYLEYLTMVP--RFDLVIMCLSLADKADLRKVWDET 413 (438)
Q Consensus 375 ~~~~~~~L~~l~~~~--RF~~~~~~ls~~ek~~~~~l~~~l 413 (438)
++.+..+|..|..-. .-.-.+.+++..++..+.+++..-
T Consensus 93 ~d~~~~ll~~l~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~ 133 (278)
T 2yvy_A 93 LDDLADALQAVRKEDPAYFQRLKDLLDPRTRAEVEALARYE 133 (278)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHSCHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhCCCccHHHHHHHHHcCCHHHHHHHHHHHCCC
Confidence 344555555554431 223335678888888888877743
No 299
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=31.71 E-value=1.6e+02 Score=24.39 Aligned_cols=88 Identities=11% Similarity=-0.134 Sum_probs=62.4
Q ss_pred CCCCCcC---cCCCccchHHHHHhhhcCCCCChhHHHHHHHHH-HHHHhccHHHHHHHHHHHhccC-CCHHHHHHHHHHH
Q 013696 53 KPSPSGN---SYSRNYDPVSHISSSLMNEESTPDATSEKELGN-ECFKQKKFKEAIDCYSRSIALS-PTAVAYANRAMAY 127 (438)
Q Consensus 53 ~~~~~~y---~~g~~~eAi~~~~~al~~~p~~~~a~~~~~~g~-~~~~~g~y~~Ai~~y~~al~~~-p~~~~~~~la~~~ 127 (438)
..+|..| .-|+...-+.+|-+.-... + +.++|. .+..+|+-++--+.+...+.-. |.+..+..+|.+|
T Consensus 63 d~IGkiFDis~C~NlKrVi~C~~~~n~~s----e---~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay 135 (172)
T 1wy6_A 63 DKIGSYFDLDKCQNLKSVVECGVINNTLN----E---HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANAL 135 (172)
T ss_dssp HHHGGGSCGGGCSCTHHHHHHHHHTTCCC----H---HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHH
T ss_pred HHHhhhcCcHhhhcHHHHHHHHHHhcchH----H---HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHH
Confidence 3456666 4578888888886653222 2 345555 4566788887777777755544 4499999999999
Q ss_pred HHhcCHHHHHHHHHHHhhcC
Q 013696 128 LKLRRFQEAEDDCTEALNLD 147 (438)
Q Consensus 128 ~~l~~~~eA~~~~~~al~l~ 147 (438)
.++|+..+|.+...+|-+..
T Consensus 136 ~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 136 RRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HHTTCHHHHHHHHHHHHHTT
T ss_pred HHhcchhhHHHHHHHHHHhh
Confidence 99999999999988887654
No 300
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=30.59 E-value=1.5e+02 Score=26.27 Aligned_cols=49 Identities=14% Similarity=0.215 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhccC--CC-HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCc
Q 013696 101 KEAIDCYSRSIALS--PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDR 149 (438)
Q Consensus 101 ~~Ai~~y~~al~~~--p~-~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~ 149 (438)
+++...|.-..... -. +..|-..|..+...|+|.+|...|..+|+....
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 46667777666654 33 888888999999999999999999999987643
No 301
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=30.38 E-value=1.1e+02 Score=31.94 Aligned_cols=48 Identities=15% Similarity=0.056 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCC
Q 013696 119 AYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGK 166 (438)
Q Consensus 119 ~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~ 166 (438)
.....|...+..|+|.-|.+.+..++..+|++..+...++.+|.++|.
T Consensus 451 ~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~ 498 (658)
T 2cfu_A 451 RLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGY 498 (658)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 344455556666777777777777777777777776667766666654
No 302
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=29.90 E-value=2.1e+02 Score=28.06 Aligned_cols=96 Identities=16% Similarity=0.145 Sum_probs=57.8
Q ss_pred HHHHHHHHhc---cHHHHHHHHHHHhccCCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHHHH
Q 013696 89 ELGNECFKQK---KFKEAIDCYSRSIALSPT---AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 162 (438)
Q Consensus 89 ~~g~~~~~~g---~y~~Ai~~y~~al~~~p~---~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a~~ 162 (438)
.+=+.++..| +|.-|+..+-.+-++.|. +... .-|.+|+...++. .+...+..|..+|-.++
T Consensus 247 ~LLWlLyd~Ghl~~YPmALgnLgDLEei~pt~grp~~~----------~Lf~~AI~~ar~~--Y~~~hvYPYtYlgG~~~ 314 (489)
T 4gq4_A 247 KLLWLLYDLGHLERYPMALGNLADLEELEPTPGRPDPL----------TLYHKGIASAKTY--YRDEHIYPYMYLAGYHC 314 (489)
T ss_dssp HHHHHHHHHTTTTTCHHHHHHHHHHHHHSCCTTSCCHH----------HHHHHHHHHHHHH--STTCCSHHHHHHHHHHH
T ss_pred HHHHHHHhccchhhcchhhhcccCHhhcCCCCCCCCHH----------HHHHHHHHHHHHh--cccCcccceeecchHHH
Confidence 4444555544 567777777766666655 1110 0123333333322 34556788888999999
Q ss_pred HcCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHH
Q 013696 163 ELGKLKESIEDSEFALRL------EPQNQEIKKQLAEVKS 196 (438)
Q Consensus 163 ~lg~~~eA~~~~~~al~l------~P~~~~~~~~l~~a~~ 196 (438)
..++|.+|+..+-.+-.. ..++.++..++.++..
T Consensus 315 R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~eIan 354 (489)
T 4gq4_A 315 RNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVAN 354 (489)
T ss_dssp HTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHHHHHH
Confidence 999999999998886532 3455666655544443
No 303
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=29.76 E-value=36 Score=31.24 Aligned_cols=36 Identities=17% Similarity=0.291 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhccCCchhHHHhhcChhhHHHHHHHHH
Q 013696 375 VDLAIKYLEYLTMVPRFDLVIMCLSLADKADLRKVWD 411 (438)
Q Consensus 375 ~~~~~~~L~~l~~~~RF~~~~~~ls~~ek~~~~~l~~ 411 (438)
++.+.++|..|..-.|=. ++.+|+..++..++.++.
T Consensus 98 ~d~~~~ll~~l~~~~~~~-i~~~l~~~e~~~i~~ll~ 133 (286)
T 2oux_A 98 TDNAVDLLNMLDKSQKAK-YLSLLSSEEAGEIKELLH 133 (286)
T ss_dssp HHHHHHHHHHSCHHHHHH-HHHTSCHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCHHHHHH-HHHcCCHHHHHHHHHHhc
Confidence 567788888888877644 678899999998888873
No 304
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=28.82 E-value=3.7e+02 Score=25.23 Aligned_cols=106 Identities=13% Similarity=0.054 Sum_probs=61.9
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhccCC------C---HHHHHHHHHHHHHhcCHHHHHHH------------------
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIALSP------T---AVAYANRAMAYLKLRRFQEAEDD------------------ 139 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~~~p------~---~~~~~~la~~~~~l~~~~eA~~~------------------ 139 (438)
....|..++..|++.+|+..|+..|..-| . ..+.-.+..|. +|--|+..
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icr----EYilal~iEl~Rr~l~~~~~kR~lEL 192 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAR----EYILGLSIELERRSLKEGNTVRMLEL 192 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHH----HHHHHHHHHHHHHTCCTTCHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhcCcccHHHHHHH
Confidence 44689999999999999999999887532 1 22211111111 11111111
Q ss_pred --HHHHhhcCCccHHHHHHHHH-HHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 013696 140 --CTEALNLDDRYIKAYSRRAT-ARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEK 200 (438)
Q Consensus 140 --~~~al~l~p~~~~a~~~lg~-a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~k 200 (438)
|-....+.|.+...-.+.|. ..++.++|..|....++.|++.|....+ ++|.+.+..
T Consensus 193 AAYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a----~qArkil~~ 252 (325)
T 3mv2_A 193 AAYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRA----EQARKIKNK 252 (325)
T ss_dssp HHHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHH----HHHHHHHHH
T ss_pred HHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHH----HHHHHHHHH
Confidence 11111233333333333342 3568899999999999999999975433 445555543
No 305
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=28.44 E-value=1.2e+02 Score=29.28 Aligned_cols=77 Identities=23% Similarity=0.110 Sum_probs=49.0
Q ss_pred HHHHHHHHhc---cHHHHHHHHHHHhccCCC-----HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHH
Q 013696 89 ELGNECFKQK---KFKEAIDCYSRSIALSPT-----AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATA 160 (438)
Q Consensus 89 ~~g~~~~~~g---~y~~Ai~~y~~al~~~p~-----~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a 160 (438)
.+-+.++..| +|.-|+..+-..-++.|. +..+ |.+|+...++- .+..++..|..+|-.
T Consensus 240 ~LLWLLyD~GhL~rYPmALgnLgDLEe~~pt~gr~~~l~L------------~~~AI~sa~~y--Y~n~HvYPYtylgGy 305 (472)
T 3re2_A 240 ELLWLLYDMGHIKTYPMAIANLGDLEEISPTPGRPPAEEL------------FKEAITVAKRE--YSDHHIYPYTYLGGY 305 (472)
T ss_dssp HHHHHHHHTTTTTTCHHHHHHHHHHHHHSCCTTSCCHHHH------------HHHHHHHHHHH--STTCCSHHHHHHHHH
T ss_pred HHHHHHHhccchhhCchhhcchhhHHhcCCCCCCCCHHHH------------HHHHHHHHHHH--hccCCccchhhhhhh
Confidence 4445566554 466777777666666654 2222 22333322222 235667788889999
Q ss_pred HHHcCCHHHHHHHHHHHHh
Q 013696 161 RKELGKLKESIEDSEFALR 179 (438)
Q Consensus 161 ~~~lg~~~eA~~~~~~al~ 179 (438)
+++.+++.+|+..+-.+-.
T Consensus 306 ~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 306 YYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred hhhcchHHHHHHHHHHHHH
Confidence 9999999999999877643
No 306
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=27.60 E-value=3.2e+02 Score=24.13 Aligned_cols=65 Identities=9% Similarity=0.038 Sum_probs=47.1
Q ss_pred HHHHHHHHHHh--hcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Q 013696 134 QEAEDDCTEAL--NLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEKE 201 (438)
Q Consensus 134 ~eA~~~~~~al--~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ka 201 (438)
..+...|.... .+.-..+..|...|..+...|+|.+|...|+.+++-.-. -...|.++...|..-
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~---P~~rL~~~~~~F~~R 197 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAK---PFLRFQQKYQQFTHR 197 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB---SHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc---cHHHHHHHHHHHHHH
Confidence 34555555554 456677888999999999999999999999999987633 244555555555543
No 307
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=27.47 E-value=1e+02 Score=30.28 Aligned_cols=32 Identities=6% Similarity=-0.090 Sum_probs=27.4
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 013696 149 RYIKAYSRRATARKELGKLKESIEDSEFALRL 180 (438)
Q Consensus 149 ~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l 180 (438)
+-..|+..+|.+|...|+|++|+.+.++++..
T Consensus 188 tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 188 NKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 34567888999999999999999999999864
No 308
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=27.16 E-value=1.2e+02 Score=30.06 Aligned_cols=33 Identities=9% Similarity=0.159 Sum_probs=27.6
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 013696 150 YIKAYSRRATARKELGKLKESIEDSEFALRLEP 182 (438)
Q Consensus 150 ~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P 182 (438)
-..|+..+|.+|...|+|++|+.+.++++....
T Consensus 201 k~aa~allarvyL~~~~~~~A~~~a~~vi~~~~ 233 (477)
T 3mcx_A 201 YWAAQALLSRVYLNMGEYQKAYDAATDVIKNNG 233 (477)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCCC
Confidence 356788899999999999999999999987543
No 309
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=25.75 E-value=3.5e+02 Score=29.48 Aligned_cols=134 Identities=14% Similarity=0.007 Sum_probs=0.0
Q ss_pred cCCCccchHHHHHhhhc---CCCCChhHHHHHHHHHHHHHhccHHHHHHHHHHHhccCC--------C---HHHHHHHHH
Q 013696 60 SYSRNYDPVSHISSSLM---NEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP--------T---AVAYANRAM 125 (438)
Q Consensus 60 ~~g~~~eAi~~~~~al~---~~p~~~~a~~~~~~g~~~~~~g~y~~Ai~~y~~al~~~p--------~---~~~~~~la~ 125 (438)
..|+.++++..+.+.+- .+.....+-+++.+|.++...++ +++..+...+.-+. . ..+-..+|.
T Consensus 386 h~g~~~~gl~~L~~yL~~~~s~~~~ik~GAllaLGli~ag~~~--~~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLGLGl 463 (963)
T 4ady_A 386 HKGNLLEGKKVMAPYLPGSRASSRFIKGGSLYGLGLIYAGFGR--DTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGL 463 (963)
T ss_dssp TSSCTTTHHHHHTTTSTTSCCSCHHHHHHHHHHHHHHTTTTTH--HHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCchHHHHHHHHHhccccCCCcHHHHHHHHHHHHHhcCCCcH--HHHHHHHHHHcCccccccccccHHHHHHHHHHHHH
Q ss_pred HHHHhcCHHHHHHHHHHHhhcCCccHH--HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 013696 126 AYLKLRRFQEAEDDCTEALNLDDRYIK--AYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLY 198 (438)
Q Consensus 126 ~~~~l~~~~eA~~~~~~al~l~p~~~~--a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~ 198 (438)
+|...++ +++...+...+.-+..... +-+.+|.++...|+-+-....+..+..-. +.........++.++
T Consensus 464 a~~GS~~-eev~e~L~~~L~dd~~~~~~~AalALGli~vGTgn~~ai~~LL~~~~e~~--~e~vrR~aalgLGll 535 (963)
T 4ady_A 464 AAMGSAN-IEVYEALKEVLYNDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQETQ--HGNITRGLAVGLALI 535 (963)
T ss_dssp HSTTCCC-HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCS--CHHHHHHHHHHHHHH
T ss_pred HhcCCCC-HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHhccC--cHHHHHHHHHHHHhh
No 310
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=25.65 E-value=1.1e+02 Score=30.06 Aligned_cols=32 Identities=16% Similarity=0.065 Sum_probs=27.5
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 013696 149 RYIKAYSRRATARKELGKLKESIEDSEFALRL 180 (438)
Q Consensus 149 ~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l 180 (438)
+-..|+..+|.+|...|+|++|+...++++..
T Consensus 194 tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 194 NRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 34567888999999999999999999999864
No 311
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=25.26 E-value=1.6e+02 Score=30.72 Aligned_cols=49 Identities=16% Similarity=0.128 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 013696 152 KAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEK 200 (438)
Q Consensus 152 ~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~k 200 (438)
.+....|......|+|..|.+....++..+|+|.++......+.+.+..
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~ 498 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGY 498 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 4566778888899999999999999999999999998888888876653
No 312
>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}
Probab=24.50 E-value=67 Score=25.16 Aligned_cols=33 Identities=18% Similarity=0.279 Sum_probs=29.1
Q ss_pred hcChhhHHHHHHHHHHhhcCCCCCcchHHHHHHHHhhhc
Q 013696 397 CLSLADKADLRKVWDETFCNESTPIEYAEILDNLRSKYC 435 (438)
Q Consensus 397 ~ls~~ek~~~~~l~~~l~~~~~~~~~~~~~~~~L~~~y~ 435 (438)
=+|..+|+.++.++.+|.... -+....|..+|-
T Consensus 59 KCTekQK~~~~kvi~~l~~n~------P~~W~~L~~KyD 91 (109)
T 2gvs_A 59 KCNEKQKEGTKKVLKHLINHK------PDVWAQLKAKYD 91 (109)
T ss_dssp TSCHHHHHHHHHHHHHHHHHC------HHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHcC------hHHHHHHHHHHC
Confidence 389999999999999999876 577999999995
No 313
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=24.38 E-value=3.8e+02 Score=26.79 Aligned_cols=64 Identities=19% Similarity=0.007 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHhcC----------------------------HHHHHHHHHHHhhcCCc-------------cHHHHH
Q 013696 117 AVAYANRAMAYLKLRR----------------------------FQEAEDDCTEALNLDDR-------------YIKAYS 155 (438)
Q Consensus 117 ~~~~~~la~~~~~l~~----------------------------~~eA~~~~~~al~l~p~-------------~~~a~~ 155 (438)
+.+++.||.+|+.+-+ |+..+.+++.|+..=|. -..|+.
T Consensus 123 aEa~flRA~~Yf~L~~~yG~VPl~~~~~~~~~~~~~~r~~~~ev~~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~a 202 (528)
T 3i4g_A 123 AEARFLRATQYFYLASYFKNVPLVENVLTGEEANNVTKTSQADILKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALA 202 (528)
T ss_dssp HHHHHHHHHHHHHHHHHTCSBCCCCSCCCHHHHTTCCCBCHHHHHHHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcceeCCCCCccccccCCCCCHHHHHHHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHH
Confidence 6777888887776432 45567778888765441 135788
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhh
Q 013696 156 RRATARKELGKLKESIEDSEFALRL 180 (438)
Q Consensus 156 ~lg~a~~~lg~~~eA~~~~~~al~l 180 (438)
.+|.+|...++|++|....+.++..
T Consensus 203 llarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 203 FLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 8999999999999999999999863
No 314
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=24.28 E-value=1.9e+02 Score=28.83 Aligned_cols=63 Identities=14% Similarity=0.144 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhcC----------------------------HHHHHHHHHHHhhcCCcc-----------HHHHHHH
Q 013696 117 AVAYANRAMAYLKLRR----------------------------FQEAEDDCTEALNLDDRY-----------IKAYSRR 157 (438)
Q Consensus 117 ~~~~~~la~~~~~l~~----------------------------~~eA~~~~~~al~l~p~~-----------~~a~~~l 157 (438)
+.+++.||.+|+.+-+ |+..+.+++.|+..=|.. ..|+..+
T Consensus 109 aea~flRA~~yf~L~~~~G~VP~~~~~~~~~~~~~~~r~~~~ev~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~all 188 (517)
T 3qnk_A 109 GEVHFLRAMFYFEMVKRYGGVILLDKVLTMEDNWEIPRSSEKECYDFILEDLKKATEMLPASYGSREKGRATKGAAYALK 188 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCCCSSCCCTTSCCCCCCCCHHHHHHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCceeeCCcCCccccccCCCCCHHHHHHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHH
Q ss_pred HHHHHHcCCHHHHHHHHHHHHh
Q 013696 158 ATARKELGKLKESIEDSEFALR 179 (438)
Q Consensus 158 g~a~~~lg~~~eA~~~~~~al~ 179 (438)
|.+|...++|++|....++++.
T Consensus 189 arv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 189 SRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
No 315
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=23.18 E-value=2.1e+02 Score=26.74 Aligned_cols=33 Identities=12% Similarity=0.128 Sum_probs=20.3
Q ss_pred CccHHHHHHHHH-HHHHcCCHHHHHHHHHHHHhh
Q 013696 148 DRYIKAYSRRAT-ARKELGKLKESIEDSEFALRL 180 (438)
Q Consensus 148 p~~~~a~~~lg~-a~~~lg~~~eA~~~~~~al~l 180 (438)
|.....+..+|. .|..+|+...|...|....+.
T Consensus 184 ~~e~dlf~~RaVL~yL~l~n~~~A~~~~~~f~~~ 217 (312)
T 2wpv_A 184 DSTVAEFFSRLVFNYLFISNISFAHESKDIFLER 217 (312)
T ss_dssp HHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 344555555554 455778887777777765543
No 316
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=23.08 E-value=4.7e+02 Score=24.46 Aligned_cols=111 Identities=15% Similarity=0.148 Sum_probs=63.9
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHhccCCC---------HHH--------HHHHHHHHHHh-cC-----HHHHHHHHHH-
Q 013696 87 EKELGNECFKQKKFKEAIDCYSRSIALSPT---------AVA--------YANRAMAYLKL-RR-----FQEAEDDCTE- 142 (438)
Q Consensus 87 ~~~~g~~~~~~g~y~~Ai~~y~~al~~~p~---------~~~--------~~~la~~~~~l-~~-----~~eA~~~~~~- 142 (438)
....|..++..|++.+|+..|+..|..-|- ..+ .|-+|+..... +. .++....++-
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 457899999999999999999999886531 122 22233222111 11 0111111111
Q ss_pred ----HhhcCCccHHHHHHHHH-HHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Q 013696 143 ----ALNLDDRYIKAYSRRAT-ARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEKE 201 (438)
Q Consensus 143 ----al~l~p~~~~a~~~lg~-a~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ka 201 (438)
...+.|.+...-.+.|. ..++.++|..|....++.|++.|.... .++|.+.+..+
T Consensus 185 AYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~----~~qArkil~~c 244 (320)
T 3mkr_B 185 AYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPEV----AQQTRKILSAC 244 (320)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHHH----HHHHHHHHHHH
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHH----HHHHHHHHHHH
Confidence 12334444333334443 346789999999999999999986332 24455555433
No 317
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=22.84 E-value=4.8e+02 Score=24.53 Aligned_cols=24 Identities=17% Similarity=0.144 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHH
Q 013696 117 AVAYANRAMAYLKLRRFQEAEDDC 140 (438)
Q Consensus 117 ~~~~~~la~~~~~l~~~~eA~~~~ 140 (438)
+..+..+|..|.+.++|.+|..+|
T Consensus 136 p~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 136 PELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCHHHHHHHH
Confidence 677777777777777777777766
No 318
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.78 E-value=31 Score=27.37 Aligned_cols=63 Identities=13% Similarity=0.107 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhcCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHH-HHHHHHHHHHHHHh
Q 013696 133 FQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKK-QLAEVKSLYEKEVF 203 (438)
Q Consensus 133 ~~eA~~~~~~al~l~p~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~P~~~~~~~-~l~~a~~~~~ka~~ 203 (438)
|++|..+..+||.+|-. |.-...+.-|.+++..++++|.+...-++..+ .+++|..+-.|-..
T Consensus 19 h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~ 82 (116)
T 2dl1_A 19 YKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKE 82 (116)
T ss_dssp HHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHH
No 319
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=22.72 E-value=1.6e+02 Score=28.85 Aligned_cols=76 Identities=13% Similarity=0.091 Sum_probs=49.6
Q ss_pred HHHHHHHHhc---cHHHHHHHHHHHhccCCC-----HHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCccHHHHHHHHHH
Q 013696 89 ELGNECFKQK---KFKEAIDCYSRSIALSPT-----AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATA 160 (438)
Q Consensus 89 ~~g~~~~~~g---~y~~Ai~~y~~al~~~p~-----~~~~~~la~~~~~l~~~~eA~~~~~~al~l~p~~~~a~~~lg~a 160 (438)
.+-+.++..| +|.-|+..+-..-++.|. +..++ .+|+...+.- .+..++..|..+|-.
T Consensus 262 ~LLWlLyd~GhL~rYPmALgnLgDLEe~~pt~gr~~~~~L~------------~~AI~sa~~~--Y~n~HvYPYtYlgGy 327 (550)
T 3u84_A 262 KLLWLLYDLGHLERYPMALGNLADLEELEPTPGRPDPLTLY------------HKGIASAKTY--YRDEHIYPYMYLAGY 327 (550)
T ss_dssp HHHHHHHHTTTTTTCHHHHHHHHHHHHHSCCTTCCCHHHHH------------HHHHHHHHHH--STTCCSHHHHHHHHH
T ss_pred HHHHHHHhccchhhCchhhcchhhHhhcCCCCCCCCHHHHH------------HHHHHHHHHH--hccCCccceeecchh
Confidence 4455566655 577777777777667665 22222 2333322222 245667788889999
Q ss_pred HHHcCCHHHHHHHHHHHH
Q 013696 161 RKELGKLKESIEDSEFAL 178 (438)
Q Consensus 161 ~~~lg~~~eA~~~~~~al 178 (438)
+++.++|.+|+..+-.+-
T Consensus 328 ~yR~~~~reAl~~WA~Aa 345 (550)
T 3u84_A 328 HCRNRNVREALQAWADTA 345 (550)
T ss_dssp HHHTTCHHHHHHHHHHHH
T ss_pred hhhcchHHHHHHHHHHHH
Confidence 999999999999987764
No 320
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=22.69 E-value=1.8e+02 Score=28.64 Aligned_cols=30 Identities=27% Similarity=0.213 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 013696 151 IKAYSRRATARKELGKLKESIEDSEFALRL 180 (438)
Q Consensus 151 ~~a~~~lg~a~~~lg~~~eA~~~~~~al~l 180 (438)
.-|+..+|.+|...|+|++|+.+.++++..
T Consensus 197 ~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 197 LSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 357888999999999999999999999864
No 321
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=21.32 E-value=1.6e+02 Score=26.47 Aligned_cols=80 Identities=11% Similarity=-0.013 Sum_probs=35.2
Q ss_pred HHHHHHHHhhcCCCchhHHhhhcCCHHHHHHHHHHHHhhc----c--ccHHHHHHHHHHhccCCchhHHHhhcChhhHHH
Q 013696 332 HALQARLLKAISPNALPQIFKNALSASILIDIVKVVATFF----T--GEVDLAIKYLEYLTMVPRFDLVIMCLSLADKAD 405 (438)
Q Consensus 332 ~~~~~~yL~~i~p~~l~~lf~~~l~~~~l~~il~~l~~~~----~--~~~~~~~~~L~~l~~~~RF~~~~~~ls~~ek~~ 405 (438)
+..++..|..++++....+|. .|+++...+++..|.... . =+++.+.++|..|..-.+=++ +..|+..+++.
T Consensus 33 ~~d~a~~l~~L~~~~~~~v~~-~l~~~~~~~vl~~l~~~~~~~ll~~l~~d~~~~ll~~l~~d~~~~l-l~~l~~~~~~~ 110 (278)
T 2yvy_A 33 PQDLLALWDELKGEHRYVVLT-LLPKAKAAEVLSHLSPEEQAEYLKTLPPWRLREILEELSLDDLADA-LQAVRKEDPAY 110 (278)
T ss_dssp HHHHHHGGGGSCHHHHHHHHH-HSCHHHHHHHHHTSCHHHHHHHHHHSCHHHHHHHHHHSCHHHHHHH-HHHHHHHCHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHH-hCChhHHHHHHHcCCHHHHHHHHHhCCHHHHHHHHHcCCHHHHHHH-HHhCCCccHHH
Confidence 334455555555555555553 444444444444331110 0 013445555555555444332 23334444445
Q ss_pred HHHHHHHh
Q 013696 406 LRKVWDET 413 (438)
Q Consensus 406 ~~~l~~~l 413 (438)
+++|+..+
T Consensus 111 ~~~ll~~l 118 (278)
T 2yvy_A 111 FQRLKDLL 118 (278)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHcC
Confidence 55555533
No 322
>1ow5_A Serine/threonine-protein kinase STE11; MAP kinase, MAPKKK, SAM domain, pointed domain, SCM domain, STE50 regulator, transferase; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1x9x_A
Probab=20.29 E-value=90 Score=23.19 Aligned_cols=59 Identities=14% Similarity=0.088 Sum_probs=37.8
Q ss_pred CHHHHHHHHhhcCCCchhHHh-hhcCCH-HHHHHHHHH-HHhhccccHHHHHHHHHHhccCC
Q 013696 331 DHALQARLLKAISPNALPQIF-KNALSA-SILIDIVKV-VATFFTGEVDLAIKYLEYLTMVP 389 (438)
Q Consensus 331 ~~~~~~~yL~~i~p~~l~~lf-~~~l~~-~~l~~il~~-l~~~~~~~~~~~~~~L~~l~~~~ 389 (438)
|...+.+||..|.-..|...| .|.+.+ ++|.++=.- |.+.=+..+.-.+.||...-.++
T Consensus 14 ~~~~v~~wL~si~c~qY~~~F~eN~I~g~d~L~eLd~e~LkElGI~kvGdRirIlk~vk~Lr 75 (85)
T 1ow5_A 14 DLPFVQLFLEEIGCTQYLDSFIQCNLVTEEEIKYLDKDILIALGVNKIGDRLKILRKSKSFQ 75 (85)
T ss_dssp --CHHHHHHHHHSCTHHHHHHHHHTCCCHHHHHHCCHHHHHHHTCCCHHHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHcCChhHHHHHHHcCCCcHHHHHHcCHHHHHHhCCCcccHHHHHHHHHHHHH
Confidence 344688999999999999999 678888 888766543 34433444444455555444433
No 323
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=20.27 E-value=1.6e+02 Score=29.19 Aligned_cols=62 Identities=18% Similarity=0.094 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhcC----------------------------HHHHHHHHHHHhhcCCcc--------HHHHHHHHHH
Q 013696 117 AVAYANRAMAYLKLRR----------------------------FQEAEDDCTEALNLDDRY--------IKAYSRRATA 160 (438)
Q Consensus 117 ~~~~~~la~~~~~l~~----------------------------~~eA~~~~~~al~l~p~~--------~~a~~~lg~a 160 (438)
+.+++.||.+|+.+-+ |+..+.+++.|+..=|.. ..|+..+|.+
T Consensus 110 aEa~flRA~~yf~L~~~fG~VP~~~~~~~~~~~~~~~r~~~~evy~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarv 189 (481)
T 3jq1_A 110 GECLFIRGFYLFQLAKEFKDAPLRLTASQSPSTFPLAKSSQADIWAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKI 189 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHSSEECCCCCCSSCCCSCCCEECHHHHHHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCeeeeccCCCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHH
Q ss_pred HHHcCCHHHHHHHHHHHH
Q 013696 161 RKELGKLKESIEDSEFAL 178 (438)
Q Consensus 161 ~~~lg~~~eA~~~~~~al 178 (438)
|...++|++|+...++++
T Consensus 190 yL~~~~~~~A~~~a~~vi 207 (481)
T 3jq1_A 190 YVYEENWQEAINVLEPLT 207 (481)
T ss_dssp HHHTTCHHHHHHHHGGGG
T ss_pred HHHHhHHHHHHHHHHHHH
No 324
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=20.25 E-value=1.3e+02 Score=22.30 Aligned_cols=35 Identities=17% Similarity=0.161 Sum_probs=27.4
Q ss_pred CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 013696 165 GKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 199 (438)
Q Consensus 165 g~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 199 (438)
+...+++..-.++|+-+|+||.++.+|...+.-|.
T Consensus 24 ~~~~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl~eys 58 (85)
T 2ca5_A 24 QTLQGELTLALDKLAKNPSNPQLLAEYQSKLSEYT 58 (85)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 34566777777788889999999888888777665
No 325
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=20.01 E-value=1.7e+02 Score=29.08 Aligned_cols=33 Identities=9% Similarity=-0.122 Sum_probs=28.2
Q ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 013696 149 RYIKAYSRRATARKELGKLKESIEDSEFALRLE 181 (438)
Q Consensus 149 ~~~~a~~~lg~a~~~lg~~~eA~~~~~~al~l~ 181 (438)
+-..|+..+|.+|...|+|++|+.+.++++...
T Consensus 201 tk~aA~allArvyL~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 201 DNEVVLGILSRACLYARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 345678889999999999999999999999764
Done!