Query 013699
Match_columns 438
No_of_seqs 255 out of 588
Neff 4.2
Searched_HMMs 13730
Date Mon Mar 25 15:27:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013699.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013699hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2mysa2 c.37.1.9 (A:4-33,A:80- 97.3 0.00011 7.8E-09 78.2 6.5 43 95-137 734-780 (794)
2 d1kk8a2 c.37.1.9 (A:1-28,A:77- 97.3 9.7E-05 7.1E-09 78.5 5.9 43 95-137 730-776 (789)
3 d2mysa2 c.37.1.9 (A:4-33,A:80- 95.9 0.0063 4.6E-07 64.3 7.8 45 118-162 735-779 (794)
4 d1kk8a2 c.37.1.9 (A:1-28,A:77- 94.7 0.026 1.9E-06 59.5 8.0 44 119-162 732-775 (789)
5 d1w7ja2 c.37.1.9 (A:63-792) My 91.7 0.059 4.3E-06 56.0 4.6 26 94-119 704-729 (730)
6 d1w7ja2 c.37.1.9 (A:63-792) My 50.2 6 0.00043 40.4 4.5 18 120-137 708-725 (730)
7 d1quua2 a.7.1.1 (A:125-248) al 3.5 6.8E+02 0.05 17.7 4.9 32 194-225 91-122 (124)
8 d1hlva2 a.4.1.7 (A:67-131) DNA 3.4 1.3E+02 0.0094 21.0 0.3 8 248-255 55-62 (65)
9 d2crna1 a.5.2.1 (A:8-58) Suppr 3.2 2.1E+02 0.016 19.1 1.3 11 214-224 32-42 (51)
10 d2k0bx1 a.5.2.1 (X:1-52) Seque 2.9 1.7E+02 0.012 20.3 0.5 15 1-15 20-36 (52)
No 1
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=97.31 E-value=0.00011 Score=78.22 Aligned_cols=43 Identities=30% Similarity=0.286 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHh----hhHHHHHHHhhhhHHHHHH
Q 013699 95 EEWAATCIQTAFRGFLARRALRAL----KGLVRLQALVRGHAVRKQA 137 (438)
Q Consensus 95 ee~AAI~IQsafRGyLARr~lraL----kgiVrLQAlvRG~lVRrqa 137 (438)
...+|+.||+.||||++|+.|+.+ .+++.||+.+||+++||.+
T Consensus 734 l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~ 780 (794)
T d2mysa2 734 LAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW 780 (794)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 356899999999999999999854 3789999999999998876
No 2
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=97.29 E-value=9.7e-05 Score=78.52 Aligned_cols=43 Identities=28% Similarity=0.387 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhh----hHHHHHHHhhhhHHHHHH
Q 013699 95 EEWAATCIQTAFRGFLARRALRALK----GLVRLQALVRGHAVRKQA 137 (438)
Q Consensus 95 ee~AAI~IQsafRGyLARr~lraLk----giVrLQAlvRG~lVRrqa 137 (438)
...+|+.||+.||||++|+.|+.+| +++.||..+||+++||.+
T Consensus 730 l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~ 776 (789)
T d1kk8a2 730 LSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW 776 (789)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 3568999999999999999999776 688889999999999876
No 3
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=95.87 E-value=0.0063 Score=64.34 Aligned_cols=45 Identities=18% Similarity=0.108 Sum_probs=39.2
Q ss_pred hhhHHHHHHHhhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 013699 118 LKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLA 162 (438)
Q Consensus 118 LkgiVrLQAlvRG~lVRrqaa~tlr~m~AaVrIQs~vRgr~~R~s 162 (438)
.+.++.||+.+||+++|+.+...+....|++.||+.+|++..|+.
T Consensus 735 ~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~ 779 (794)
T d2mysa2 735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKH 779 (794)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 346889999999999999998776777899999999999988754
No 4
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=94.74 E-value=0.026 Score=59.48 Aligned_cols=44 Identities=25% Similarity=0.163 Sum_probs=37.1
Q ss_pred hhHHHHHHHhhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Q 013699 119 KGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLA 162 (438)
Q Consensus 119 kgiVrLQAlvRG~lVRrqaa~tlr~m~AaVrIQs~vRgr~~R~s 162 (438)
+.++.||+.+||+++|+++........+++.||+.+|++.+|+.
T Consensus 732 ~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~ 775 (789)
T d1kk8a2 732 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 775 (789)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 36788999999999999996554455689999999999998864
No 5
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=91.67 E-value=0.059 Score=56.01 Aligned_cols=26 Identities=27% Similarity=0.432 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhh
Q 013699 94 REEWAATCIQTAFRGFLARRALRALK 119 (438)
Q Consensus 94 ree~AAI~IQsafRGyLARr~lraLk 119 (438)
....+|++||+.||||++||.|..+|
T Consensus 704 ~l~~~~~~iQ~~~R~~l~Rk~~~r~r 729 (730)
T d1w7ja2 704 KLRAACIRIQKTIRGWLMRKKYMRMR 729 (730)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34558999999999999999988765
No 6
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=50.18 E-value=6 Score=40.42 Aligned_cols=18 Identities=33% Similarity=0.589 Sum_probs=13.2
Q ss_pred hHHHHHHHhhhhHHHHHH
Q 013699 120 GLVRLQALVRGHAVRKQA 137 (438)
Q Consensus 120 giVrLQAlvRG~lVRrqa 137 (438)
.+++||+.+||+++||++
T Consensus 708 ~~~~iQ~~~R~~l~Rk~~ 725 (730)
T d1w7ja2 708 ACIRIQKTIRGWLMRKKY 725 (730)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 467777777777777776
No 7
>d1quua2 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.45 E-value=6.8e+02 Score=17.69 Aligned_cols=32 Identities=22% Similarity=0.312 Sum_probs=27.5
Q ss_pred CcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Q 013699 194 GSVEEIQAKLLKRQEAAAKRERAMAYALAHQW 225 (438)
Q Consensus 194 ~S~eei~akl~~RqEAA~KRERAlAYAfshQ~ 225 (438)
...++|..++..=.+++..|++.|.-++-.|.
T Consensus 91 ~~~~~L~~~W~~L~~~~~~R~~~L~e~l~~Qq 122 (124)
T d1quua2 91 VTMDELRTKWDKVKQLVPIRDQSLQEELARQH 122 (124)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45778999999999999999999999887764
No 8
>d1hlva2 a.4.1.7 (A:67-131) DNA-binding domain of centromere binding protein B (CENP-B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.43 E-value=1.3e+02 Score=20.95 Aligned_cols=8 Identities=38% Similarity=1.136 Sum_probs=6.8
Q ss_pred chhhhhhc
Q 013699 248 NWLERWMA 255 (438)
Q Consensus 248 sWLERWmA 255 (438)
.||+||+.
T Consensus 55 GWL~rFK~ 62 (65)
T d1hlva2 55 GWLDRFRR 62 (65)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 69999984
No 9
>d2crna1 a.5.2.1 (A:8-58) Suppressor of T-cell receptor signaling 2 (STS-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.16 E-value=2.1e+02 Score=19.07 Aligned_cols=11 Identities=36% Similarity=0.483 Sum_probs=9.7
Q ss_pred HHHHHHHHHHH
Q 013699 214 ERAMAYALAHQ 224 (438)
Q Consensus 214 ERAlAYAfshQ 224 (438)
|+|+.|.|+|+
T Consensus 32 e~A~~Wl~~h~ 42 (51)
T d2crna1 32 EEALAWLHDHC 42 (51)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHcC
Confidence 67999999995
No 10
>d2k0bx1 a.5.2.1 (X:1-52) Sequestosome 1 (Sqstm1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.93 E-value=1.7e+02 Score=20.31 Aligned_cols=15 Identities=40% Similarity=0.906 Sum_probs=11.4
Q ss_pred CCCC--ChhHHHHhhcc
Q 013699 1 MGVA--GKWIKALVGLK 15 (438)
Q Consensus 1 MG~S--gkW~kslv~~k 15 (438)
||-+ |.||-.|+--+
T Consensus 20 MGFsneGGWLt~LL~sk 36 (52)
T d2k0bx1 20 MGFSDEGGWLTRLLQTK 36 (52)
T ss_dssp HTCCCSSSCHHHHHHHT
T ss_pred cCCCCcchHHHHHHHHc
Confidence 6777 88998887644
Done!